Tan0003398 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGCACGTGCCCTCCGGAGGAAGTGTCAACCGCCAACACTACCGGTGGCCTCTGAGAAAATGACAGATCTAAGCCGATGGTGGATTATATCAACTGGGCGAGGTAACCTCTCTTAGATCTCATATGACATCTCTCACTCATGTCCTGAATAATTTTGCATGATCACCACAGACAAGGATGTCCTCTCAATGCTCCCAGATCAATAGAGAATCCACTATAGAGCAATTGCACTACCTGAACAATAGAAGCAACCACTATGGAGGAAATCAGACTCAGAATAACCTACGAACACATTACAATCCAGGTTTGAGGTATCATGAGAATTTCTCTTATGTTAACAAGAAGAATGTGTTGAATCCTCCTACAGGGCATGCTTCTACATCAGAGAGGAAACCATCTCTGGAAGACACATTGCACTCCTTCATAGTTGAATCCAGAAGTCGGTCCAACCAGCTGGAGAATGCAGTCACCAGTTTATCTGGTATAGTGACCAATCATGGAGTTGCAATAAAGAAAATAAAGACCCAGATTGGCCAAATGAACACATCACTCCACGCACTGCAAGCAAGGAATGAAACACCTTGAGGGAGTACAGTCTAGCTAAAGACGTTAAACAAAGCGCTTCTTGGGAGGCAACCCAAGTTTTACTTACTTTAGTTGTTTTTGTTGTTTTTCAATTCTTAGTTAGTTGTTGTTTTATTTCGTAGGTTGTGGAGATGCCCTTCTTCATTGAAATCCATGCTCCAATTCAGAGGAACTCCAACACACATGCTTTGGCTATCCAAGGAACTCAGAAAGATCTCCATCACCCAGGATAGTATCGTTCACTTCTACCCTTATACTTACCTCATGCTTATTTCTACAAACATTGGAGACAATGTTTAGTTTAAGTTTGGGGGTGGGATTGTGTTTATTTGTTGTGGCTGTCCTGAGTATGTGCTGAATTTTTTGTTGATCTTTTACATAAGTATGAGTATGATAGCCTAGGATGAGATTTATTTGAAAATCTTTGTGATTCTGCTGAAACCTGAAAGCATGACATGAATTTGAGTTAATTTTAAAAAAAAAAATCTTGAGTTTTTCCTGCACCATTATGCACATAGCATGTGTTCCTGTAGTTTTGAAATGCTTAGAACAAAGTTATTAGGCTTAGAAGTTTAATGTCACCTCGATAGTCCTGAAACCGATTTGAGAGTTAAAGCTGCAAGATAGGGTGAATGACAATATAAAGTGCATGATCTGTATAATATGTGCATTATGTGAAAAAGTTTATTTTTTTGTTGTTATGTTTGTTAAAGAAAAAAAAAGTGAGGACAAAAAGAGCTACTTTCACTGTGATCAGTTAGGCCACTCATTGAGCGAGTGGTCTGGGTAAGGGTCCCTGCAGTGGATGTGTGAAAGCTAGTGTCCTTGCACAAAAAAATAAGAAGAAAATAGAAAAGTGGCATTTAAAGAAAGATTAAGTGCTGAGTAACGTTATTTATTTCTTGAATGTGGAGAGGCTCAAAGATTAGTAACTAAGACCAGTGTAGGGGGAAGTTGAATGGAGAACCTAATAAAGTTGATCCGGGCTTAGTAAAAATGAAGGGAACATAGGCTAATCACACACACACGTAGGAACACTTAGGAAAAGTTTTAAATTACTTGTTGAAGTGTTATGTTTAAGTGTTTCCTGTGATTGCAAAATATTCTCTTAAATCTTTGAGGCTTGAATCAAATGTATGTTTAAGAACAACCTAATGTTTAACTCTGTTTTTGCTCGGGACTAGCAAAAGTTTAAGTTTGGGGGTGTTTGATAGCACACAAAATGTGCTATCCTTAGGCTTAATTATTGCTAGTTTTATGATGATTTCAGGACTTTTACGTGGTTATTCCATTCAATTTCAGGTTAAGAGCTTAAACGGAGCTATTGGAGACAATTTGGATCACTCGGGATCAAAACGAGACTATTTGGAGCTAAAAATAATACCATTTGGGAGAGAAAGGATCAATCCAAGCATGGTGACCCGAGGTGATGGCGTTGCAACGCTGAGGACAGCGTTGCAAAGCCATGCTTGCT AAGCACGTGCCCTCCGGAGGAAGTGTCAACCGCCAACACTACCGGTGGCCTCTGAGAAAATGACAGATCTAAGCCGATGGTGGATTATATCAACTGGGCGAGACAAGGATGTCCTCTCAATGCTCCCAGATCAATAGAGAATCCACTATAGAGCAATTGCACTACCTGAACAATAGAAGCAACCACTATGGAGGAAATCAGACTCAGAATAACCTACGAACACATTACAATCCAGGTTTGAGGTATCATGAGAATTTCTCTTATGTTAACAAGAAGAATGTGTTGAATCCTCCTACAGGGCATGCTTCTACATCAGAGAGGAAACCATCTCTGGAAGACACATTGCACTCCTTCATAGTTGAATCCAGAAGTCGGTCCAACCAGCTGGAGAATGCAGTCACCAGTTTATCTGGTATAGTGACCAATCATGGAGTTGCAATAAAGAAAATAAAGACCCAGATTGGCCAAATGAACACATCACTCCACGCACTGCAAGCAAGGAATGAAACACCTTGAGGGAGTACAGTCTAGCTAAAGACGTTAAACAAAGCGCTTCTTGGGAGGCAACCCAAGTTTTACTTACTTTAGTTGTTTTTGTTGTTTTTCAATTCTTAGTTAGTTGTTGTTTTATTTCGTAGGTTGTGGAGATGCCCTTCTTCATTGAAATCCATGCTCCAATTCAGAGGAACTCCAACACACATGCTTTGGCTATCCAAGGAACTCAGAAAGATCTCCATCACCCAGGATAGTATCGTTCACTTCTACCCTTATACTTACCTCATGCTTATTTCTACAAACATTGGAGACAATGTTTAGTTTAAGTTTGGGGGTGGGATTGTGTTTATTTGTTGTGGCTGTCCTGAGTATGTGCTGAATTTTTTGTTGATCTTTTACATAAGTATGAGTATGATAGCCTAGGATGAGATTTATTTGAAAATCTTTGTGATTCTGCTGAAACCTGAAAGCATGACATGAATTTGAGTTAATTTTAAAAAAAAAAATCTTGAGTTTTTCCTGCACCATTATGCACATAGCATGTGTTCCTGTAGTTTTGAAATGCTTAGAACAAAGTTATTAGGCTTAGAAGTTTAATGTCACCTCGATAGTCCTGAAACCGATTTGAGAGTTAAAGCTGCAAGATAGGGTGAATGACAATATAAAGTGCATGATCTGTATAATATGTGCATTATGTGAAAAAGTTTATTTTTTTGTTGTTATGTTTGTTAAAGAAAAAAAAAGTGAGGACAAAAAGAGCTACTTTCACTGTGATCAGTTAGGCCACTCATTGAGCGAGTGGTCTGGGTAAGGGTCCCTGCAGTGGATGTGTGAAAGCTAGTGTCCTTGCACAAAAAAATAAGAAGAAAATAGAAAAGTGGCATTTAAAGAAAGATTAAGTGCTGAGTAACGTTATTTATTTCTTGAATGTGGAGAGGCTCAAAGATTAGTAACTAAGACCAGTGTAGGGGGAAGTTGAATGGAGAACCTAATAAAGTTGATCCGGGCTTAGTAAAAATGAAGGGAACATAGGCTAATCACACACACACGTAGGAACACTTAGGAAAAGTTTTAAATTACTTGTTGAAGTGTTATGTTTAAGTGTTTCCTGTGATTGCAAAATATTCTCTTAAATCTTTGAGGCTTGAATCAAATGTATGTTTAAGAACAACCTAATGTTTAACTCTGTTTTTGCTCGGGACTAGCAAAAGTTTAAGTTTGGGGGTGTTTGATAGCACACAAAATGTGCTATCCTTAGGCTTAATTATTGCTAGTTTTATGATGATTTCAGGACTTTTACGTGGTTATTCCATTCAATTTCAGGTTAAGAGCTTAAACGGAGCTATTGGAGACAATTTGGATCACTCGGGATCAAAACGAGACTATTTGGAGCTAAAAATAATACCATTTGGGAGAGAAAGGATCAATCCAAGCATGGTGACCCGAGGTGATGGCGTTGCAACGCTGAGGACAGCGTTGCAAAGCCATGCTTGCT ATGTCCTCTCAATGCTCCCAGATCAATAGAGAATCCACTATAGAGCAATTGCACTACCTGAACAATAGAAGCAACCACTATGGAGGAAATCAGACTCAGAATAACCTACGAACACATTACAATCCAGGTTTGAGGTATCATGAGAATTTCTCTTATGTTAACAAGAAGAATGTGTTGAATCCTCCTACAGGGCATGCTTCTACATCAGAGAGGAAACCATCTCTGGAAGACACATTGCACTCCTTCATAGTTGAATCCAGAAGTCGGTCCAACCAGCTGGAGAATGCAGTCACCAGTTTATCTGGTATAGTGACCAATCATGGAGTTGCAATAAAGAAAATAAAGACCCAGATTGGCCAAATGAACACATCACTCCACGCACTGCAAGCAAGGAATGAAACACCTTGA MSSQCSQINRESTIEQLHYLNNRSNHYGGNQTQNNLRTHYNPGLRYHENFSYVNKKNVLNPPTGHASTSERKPSLEDTLHSFIVESRSRSNQLENAVTSLSGIVTNHGVAIKKIKTQIGQMNTSLHALQARNETP Homology
BLAST of Tan0003398 vs. NCBI nr
Match: PON42760.1 (hypothetical protein PanWU01x14_279370 [Parasponia andersonii]) HSP 1 Score: 98.6 bits (244), Expect = 4.4e-17 Identity = 56/124 (45.16%), Postives = 78/124 (62.90%), Query Frame = 0
BLAST of Tan0003398 vs. NCBI nr
Match: PON37662.1 (LOW QUALITY PROTEIN: hypothetical protein TorRG33x02_346970 [Trema orientale]) HSP 1 Score: 92.4 bits (228), Expect = 3.1e-15 Identity = 53/124 (42.74%), Postives = 77/124 (62.10%), Query Frame = 0
BLAST of Tan0003398 vs. NCBI nr
Match: XP_024030361.1 (uncharacterized protein LOC112094221 [Morus notabilis]) HSP 1 Score: 91.3 bits (225), Expect = 7.0e-15 Identity = 52/131 (39.69%), Postives = 81/131 (61.83%), Query Frame = 0
BLAST of Tan0003398 vs. NCBI nr
Match: XP_023903214.1 (uncharacterized protein LOC112015077 [Quercus suber]) HSP 1 Score: 91.3 bits (225), Expect = 7.0e-15 Identity = 52/120 (43.33%), Postives = 80/120 (66.67%), Query Frame = 0
BLAST of Tan0003398 vs. NCBI nr
Match: XP_023889786.1 (uncharacterized protein LOC112001854 [Quercus suber]) HSP 1 Score: 90.9 bits (224), Expect = 9.1e-15 Identity = 51/120 (42.50%), Postives = 80/120 (66.67%), Query Frame = 0
BLAST of Tan0003398 vs. ExPASy TrEMBL
Match: A0A2P5B1T0 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_279370 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 2.1e-17 Identity = 56/124 (45.16%), Postives = 78/124 (62.90%), Query Frame = 0
BLAST of Tan0003398 vs. ExPASy TrEMBL
Match: A0A2P5AMA4 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_346970 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 1.5e-15 Identity = 53/124 (42.74%), Postives = 77/124 (62.10%), Query Frame = 0
BLAST of Tan0003398 vs. ExPASy TrEMBL
Match: A0A2P5B7D3 (Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_330330 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 1.3e-14 Identity = 54/125 (43.20%), Postives = 73/125 (58.40%), Query Frame = 0
BLAST of Tan0003398 vs. ExPASy TrEMBL
Match: A0A2P5CLG4 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_142990 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 3.2e-13 Identity = 49/118 (41.53%), Postives = 75/118 (63.56%), Query Frame = 0
BLAST of Tan0003398 vs. ExPASy TrEMBL
Match: A0A6P9DWY0 (uncharacterized protein LOC118344026 OS=Juglans regia OX=51240 GN=LOC118344026 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 3.2e-13 Identity = 52/122 (42.62%), Postives = 78/122 (63.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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