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Tan0003372 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGATGTACAAGCACAAGAAGAACCAGAATGTTAAGGGCAACAGGCTCTTGATCAGCATCAATGTGCTTGGCAGCGCTGGCCCGATTCGATTTATTGTGAGCGAGGGGCAACTTGTTGCTGCTGTTATTGATACCGCGTTGAAATCCTACGCGCGTGAGGGCAGGCTGCCGATTCTTGGCTCCGATCTTCGCGATTTCCAGCTTTACTGCCCAAATGCTGGACCAGATGGTAATTCTCTCAATTCAATTGTTTTTTGTTACAATTTCCTTTACAATCATGTTGCATGTTTCCAATCTGAAAGGGTGGAGAATAAAATTAAGATGCCATTCATAAATATGTTATCTCGTTTTGTGATGGTGATCTCTGTTCTGGGGTTTGTTTCTTAGTCTTTGTGTTGGGATTCTCTGTTTTTCTATCTTGGGAATCCTCTGATCATATTTTAAAAAAAGACATCTGGGATTTTGTTTGGAAATTTTTATGCAGCCTTAAGTCCATGGGACACAATTGGATCGCACGGAGCTCGAAACTTCATGTTGTGCAGGAAACCACAGCCAGAGAAATTGGCAAAAAATGGAAAATCACCATCAGGGTCAGCCATCCCTCGCAAAGGCGGCTCGGGGAGATGGAAGTCATGGTTCAACAAGTCTCTGAGTTTGAAAATCTATTCCCATTAA ATGTTGATGTACAAGCACAAGAAGAACCAGAATGTTAAGGGCAACAGGCTCTTGATCAGCATCAATGTGCTTGGCAGCGCTGGCCCGATTCGATTTATTGTGAGCGAGGGGCAACTTGTTGCTGCTGTTATTGATACCGCGTTGAAATCCTACGCGCGTGAGGGCAGGCTGCCGATTCTTGGCTCCGATCTTCGCGATTTCCAGCTTTACTGCCCAAATGCTGGACCAGATGCCTTAAGTCCATGGGACACAATTGGATCGCACGGAGCTCGAAACTTCATGTTGTGCAGGAAACCACAGCCAGAGAAATTGGCAAAAAATGGAAAATCACCATCAGGGTCAGCCATCCCTCGCAAAGGCGGCTCGGGGAGATGGAAGTCATGGTTCAACAAGTCTCTGAGTTTGAAAATCTATTCCCATTAA ATGTTGATGTACAAGCACAAGAAGAACCAGAATGTTAAGGGCAACAGGCTCTTGATCAGCATCAATGTGCTTGGCAGCGCTGGCCCGATTCGATTTATTGTGAGCGAGGGGCAACTTGTTGCTGCTGTTATTGATACCGCGTTGAAATCCTACGCGCGTGAGGGCAGGCTGCCGATTCTTGGCTCCGATCTTCGCGATTTCCAGCTTTACTGCCCAAATGCTGGACCAGATGCCTTAAGTCCATGGGACACAATTGGATCGCACGGAGCTCGAAACTTCATGTTGTGCAGGAAACCACAGCCAGAGAAATTGGCAAAAAATGGAAAATCACCATCAGGGTCAGCCATCCCTCGCAAAGGCGGCTCGGGGAGATGGAAGTCATGGTTCAACAAGTCTCTGAGTTTGAAAATCTATTCCCATTAA MLMYKHKKNQNVKGNRLLISINVLGSAGPIRFIVSEGQLVAAVIDTALKSYAREGRLPILGSDLRDFQLYCPNAGPDALSPWDTIGSHGARNFMLCRKPQPEKLAKNGKSPSGSAIPRKGGSGRWKSWFNKSLSLKIYSH Homology
BLAST of Tan0003372 vs. ExPASy Swiss-Prot
Match: Q56XJ7 (Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 1.2e-04 Identity = 33/97 (34.02%), Postives = 49/97 (50.52%), Query Frame = 0
BLAST of Tan0003372 vs. NCBI nr
Match: XP_004150595.1 (uncharacterized protein At4g22758 [Cucumis sativus] >KGN51491.1 hypothetical protein Csa_007791 [Cucumis sativus]) HSP 1 Score: 251.5 bits (641), Expect = 4.2e-63 Identity = 122/140 (87.14%), Postives = 130/140 (92.86%), Query Frame = 0
BLAST of Tan0003372 vs. NCBI nr
Match: XP_016898863.1 (PREDICTED: uncharacterized protein At4g22758-like [Cucumis melo]) HSP 1 Score: 250.0 bits (637), Expect = 1.2e-62 Identity = 121/140 (86.43%), Postives = 129/140 (92.14%), Query Frame = 0
BLAST of Tan0003372 vs. NCBI nr
Match: XP_022152330.1 (uncharacterized protein At4g22758-like [Momordica charantia]) HSP 1 Score: 245.7 bits (626), Expect = 2.3e-61 Identity = 117/140 (83.57%), Postives = 126/140 (90.00%), Query Frame = 0
BLAST of Tan0003372 vs. NCBI nr
Match: XP_038875275.1 (uncharacterized protein At4g22758 isoform X1 [Benincasa hispida]) HSP 1 Score: 245.0 bits (624), Expect = 3.9e-61 Identity = 119/140 (85.00%), Postives = 128/140 (91.43%), Query Frame = 0
BLAST of Tan0003372 vs. NCBI nr
Match: XP_038875276.1 (uncharacterized protein At4g22758 isoform X2 [Benincasa hispida]) HSP 1 Score: 245.0 bits (624), Expect = 3.9e-61 Identity = 119/140 (85.00%), Postives = 128/140 (91.43%), Query Frame = 0
BLAST of Tan0003372 vs. ExPASy TrEMBL
Match: A0A0A0KUW8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G569870 PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 2.0e-63 Identity = 122/140 (87.14%), Postives = 130/140 (92.86%), Query Frame = 0
BLAST of Tan0003372 vs. ExPASy TrEMBL
Match: A0A1S4DSB9 (uncharacterized protein At4g22758-like OS=Cucumis melo OX=3656 GN=LOC107990297 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 5.9e-63 Identity = 121/140 (86.43%), Postives = 129/140 (92.14%), Query Frame = 0
BLAST of Tan0003372 vs. ExPASy TrEMBL
Match: A0A6J1DDM7 (uncharacterized protein At4g22758-like OS=Momordica charantia OX=3673 GN=LOC111020076 PE=4 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 1.1e-61 Identity = 117/140 (83.57%), Postives = 126/140 (90.00%), Query Frame = 0
BLAST of Tan0003372 vs. ExPASy TrEMBL
Match: A0A6J1FHE7 (uncharacterized protein At4g22758-like OS=Cucurbita moschata OX=3662 GN=LOC111445404 PE=4 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 4.2e-61 Identity = 118/140 (84.29%), Postives = 129/140 (92.14%), Query Frame = 0
BLAST of Tan0003372 vs. ExPASy TrEMBL
Match: A0A6J1H7B9 (uncharacterized protein At4g22758-like OS=Cucurbita moschata OX=3662 GN=LOC111460829 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 5.7e-58 Identity = 116/140 (82.86%), Postives = 124/140 (88.57%), Query Frame = 0
BLAST of Tan0003372 vs. TAIR 10
Match: AT1G70780.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 143 Blast hits to 143 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 143; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 183.7 bits (465), Expect = 1.0e-46 Identity = 95/142 (66.90%), Postives = 110/142 (77.46%), Query Frame = 0
BLAST of Tan0003372 vs. TAIR 10
Match: AT1G23150.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70780.1); Has 124 Blast hits to 124 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 178.3 bits (451), Expect = 4.2e-45 Identity = 91/142 (64.08%), Postives = 104/142 (73.24%), Query Frame = 0
BLAST of Tan0003372 vs. TAIR 10
Match: AT5G37730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 101.3 bits (251), Expect = 6.5e-22 Identity = 50/105 (47.62%), Postives = 72/105 (68.57%), Query Frame = 0
BLAST of Tan0003372 vs. TAIR 10
Match: AT2G01554.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G70780.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 50.8 bits (120), Expect = 1.0e-06 Identity = 47/137 (34.31%), Postives = 65/137 (47.45%), Query Frame = 0
BLAST of Tan0003372 vs. TAIR 10
Match: AT4G22758.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G27830.1). ) HSP 1 Score: 47.8 bits (112), Expect = 8.6e-06 Identity = 33/97 (34.02%), Postives = 49/97 (50.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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