Tan0003340 (gene) Snake gourd v1

Overview


Name	Tan0003340
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Gag protease polyprotein
Location	LG02: 34521624 .. 34525155 (+)
RNA-Seq Expression	Tan0003340
Synteny	Tan0003340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCCTTCTTCGACCAAGCAGCTGTCGACGCCTCTCCTTCTCCCCCATCCAGTCGTCACCTTCACATCGACAGCCCAAGTCTGCAACCCACCGAAGACCTGCAAGTCGTTCGACCGTCAATTCCAACATTTGAACCCATGAGCAGCTGCATATCAGGAAGTGACGTCGGAATTGCACGTCGTTCTGTTCGTGGGTGTCGTTAATCATCATTTGACCGGAACGACTGGGCGTGCGAGAATCGAGCTACGCCTTCTCAGCCTCAGAACTCGCCGAAGTCGTCGACCTGCAAGTGTAGAGTCGAACGTCAGCCACCAGAAGTGTTATCATCGATTCCTTGACGTCACCTATTCAACTCTTGGTTCGAATTTTTGAGTGGGTTTTCAGCCGGTTTTTGAAGTCTAGTGATCGGTTCTGTGTAGATCGACGAGTGGGCATTCCAAAACTAGGTTCCACGCGCTGAGGCGTACTATTGCGCCGCCACACACGCTGCCGCCGGCCGCCATCGTTTGCCGAAGCTTGTTCGATTCTTTTAGTTTCGCTCTAGAGTTCATTTTCAGCCTTCGTTAGTGGTAATTTAGCCTAGGTAGTGTTGAATTTCAAGAATAAGGTTAATTATGTGTATGAACTTAAATTAGTAAATTATGATTTTTTTTTAGGAATCCGTTCATTGGCCAGACGGGAGGACATCAAAGTGAGAACAGATTTTAGTACAGTGCAAAACTAAATCTAAGGTAAGGGACCTCATGTCGAACTCAAAATGGGATGAAAGTTATAGTTTTCATTAAATTTTTATGATTTGATATTTCGAAAGTATTACTTCTTAAAATGTTTTAAAATTGAAAGTTATGAGTGTTATGCTTGATCTATGATTGAATGACTTAAGTTTAATATTATGAAAGTTATGCTATGATTTATGATTGATTGATAGCTTAAATATTATGAAACAGTATGTTATGATATGTGATTTACAATGATTCTATGGCATGTTCATCATAGTATTTGAAAGGATGATGGGACCTCATGCATGATTGTATGTACATGAAATAGTTCAAGTGGTTATGGCAATTATTCTCCATATGACTATAGGAGTTTGAGAGGACCCACATATGACAGTGGTCTTTGGACCTAACATGCTCCCAGAATTTTGAGAAGACCCCATACGATAGGAGTCTTCGGACTCAACATGCTCTCGGGGTTATGAGAGGACCCCATATGATAGGAGTCTTCGGACTTAACATGATTCAGGGGTCTTTGGACTCAACATGCTCTCAAGATTTTGAGAGGACCCCATATGATAGGAGTCTTCGAACTCAACATGCTCTTGGGGTTAGGGAGGACTCCATATGATAGGAGTTTTCAGACTCAACATGCTCTCAGGAGAATCTAATTGACCACTAAAAACCAAAGGAAATAGTCATGATAGTTTTATGAGAAAGTTAGGTCTCACACATAGGAAAGTTTTATAGTCATGGTTGTATGTGTATGCATATCCCAAAACCTTGGTAGCGAGGTCACTTACTGGGTATTATTTTTATAATACTCACCCTTTCTTTTAAAATGTTTTTCAGGTAAAGGCAAAGGCGTACAGGGCGAGTGACGAGACGAGTTAGAAGGCTATGGGACAAAGCCATGATTTCCCGCATTTATGTCTTAATAGTTATGATTAAACGATTTTGATTATGCATTAAGATAATAGAGAATCAAATTGAAGCCAAACTGATTAATGTTGTTTTTAAATGTTTTGATTTTTCTTAGGGATCCCTAAATGTAGTTTTGGTTGTGCTTTAAAGTTAAACTATTCTTATTATATTTTTGGCCTAAAATGCATGCATGAGTAGTAACGTCTCTAGGAGTCGAGTTATAAAAGTTAGGGGCATTATAGTTGGTACCAGAGCCCTAGGTTTGGGTTATGTAGACTTGCTTACATCGTAAGCACTATTATCCCATGGCTAAGTAATCGATCCCAGTCACCGCAAGGTATGTCTTTGAATTTATAAATATGAATAACTGTTTTACCATGATTGAATGTTATGTTATTGAGACTGATTTGAATGATTAAATGTGATCCCTACCTTATGGGCAGCAAAGGACTAGACTGAATTAGAGAATCCTCTTATGTTGTAGTACTGAGGAATATGCCGCCAAGAGGAAGAGGAAAAGGTCGAGGTAGGGGAAGTGGCAGAGGTAGGGTGGCAGGAAGAGTAGGTAACCTACCACCAGAGAACCAAGAGGAGATCCTCCAACCTATATCGAACCTTCTGCATGATCAACTAGGTCGTCAAGAAGATATTCCTTTAGCAACCCCAACATGGGGACAGACTAATCCAAATGTTATGACCATGATGGTGGAGGCAATGCAGGCCTTAGTGCGAGCTACAGTGGCCACCCAGTTGGCTCAGACAGGTCAAGTACAAAATGATGTGTCAATTGAGCTCAGATACCTAAAAGATTTTAGGAAATATGACCCACGACCGTTTGATGGGTCTTCCCATGATCCTACAGTGGCGGAGTTATGGGTGTCCTCGATTGAAACAATTTTTAGATTGACGAATTGCTTGGAATACCGGAGGGTATCTTGTGCAGCTTTTATGTTGAGAGATGATACCTATTTGTGATGGGAGTCCGCTCAAAGGACCATGGACACTAATGGAGAACTAATCACTTGGAATATGTTTAGAGAGGCATTCTGGCACAAATTTTACCCAACCACGACTCAGTATAGGAAGCAAGTTGAGTTCCTACAACTCTGTCAGAATAGAAGACCTATAGAGGATTATGAGAGAGAATTCACACAATTAATGCGTTTTGCTCCAGAACTGGTGGACACCGAGGCTAAGTAAGTAGAACAAATTGTTATGGGACTAGATGAGGGTATTCGAGGATTCATTCTGCACTTTCACCCCCGGATTATGCTTCAGCAGTAAGAGTAGTTGAATTGATTGGTGTTCAGTCTCATAGTGTGCAACAGGAAATAGTTAACCCGAGTCAGCCACTTTCAGGCTATAAAAGGAAGTGGGATTAGGAAGGTTCTGATCTCCAGCTTTATCAGCAACCTTCGAGATCATCGAACGATTCACATTCCACCCCTAGTCAGAGACAACCAGTTCGAACAGGTAAAGATGTGGTGAGAAACCACGCTATAAGGAATGTGGAAGATATCATTGGGGCAAGTGTTTAGCTCGTTTTAGGGAATGTTTCAGATGCAAGAAAGAGGGGCACAGAGCAGAGAGTTGTCTCAATCAAGGTACCATGGATGATCAACCTTCCTGATCGAATGGAGCTGGATCTTTTGAACAAACGACTGAACAAGGAAGAGCTTTTGCCAGTACAAGTCGAGACACTAGCAACTTCGATCCAACGATCACAAGTACATTTCTCGTACTTAGATACTTTATTTAACTTCCCTCCAGGATGTATACATTTGTTGTTCTATGCATGTTTTAGAGTTAGGGTTGCTAACTTTTGTCTGGTGGTTGCCACTTCGATGGGAGTGAGTTGTTTGGTTATTGAAATGATTAAAGTTTTAAGTTGA

mRNA sequence

TCTCCTTCTTCGACCAAGCAGCTGTCGACGCCTCTCCTTCTCCCCCATCCAGTCGTCACCTTCACATCGACAGCCCAAGTCTGCAACCCACCGAAGACCTGCAAGTCGTTCGACCGTCAATTCCAACATTTGAACCCATGAGCAGCTGCATATCAGGAAGTGACGTCGGAATTGCACGTCGTTCTGTTCGTGGGTGTCGTTAATCATCATTTGACCGGAACGACTGGGCGTGCGAGAATCGAGCTACGCCTTCTCAGCCTCAGAACTCGCCGAAGTCGTCGACCTGCAAGTGTAGAGTCGAACGTCAGCCACCAGAAGTGTTATCATCGATTCCTTGACGTCACCTATTCAACTCTTGGTTCGAATTTTTGAGTGGGTTTTCAGCCGGTTTTTGAAGTCTAGTGATCGGTTCTGTGTAGATCGACGAGTGGGCATTCCAAAACTAGGTTCCACGCGCTGAGGCGTACTATTGCGCCGCCACACACGCTGCCGCCGGCCGCCATCGTTTGCCGAAGCTTGTTCGATTCTTTTAGTTTCGCTCTAGAGTTCATTTTCAGCCTTCGTTAGTGGAATCCGTTCATTGGCCAGACGGGAGGACATCAAAGTGAGAACAGATTTTAGTACAGTGCAAAACTAAATCTAAGGTAAAGGCAAAGGCGTACAGGGCGAGTGACGAGACGAGTTAGAAGGCTATGGGACAAAGCCATGATTTCCCGCATTTATGTCTTAATAGTTATGATTAAACGATTTTGATTATGCATTAAGATAATAGAGAATCAAATTGAAGCCAAACTGATTAATGTTGTTTTTAAATGTTTTGATTTTTCTTAGGGATCCCTAAATGTAGTTTTGGTTGTGCTTTAAAGTTAAACTATTCTTATTATATTTTTGGCCTAAAATGCATGCATGAGTAGTAACGTCTCTAGGAGTCGAGTTATAAAAGTTAGGGGCATTATAGTTGGTACCAGAGCCCTAGGTTTGGGTTATGTAGACTTGCTTACATCGTAAGCACTATTATCCCATGGCTAAGTAATCGATCCCAGTCACCGCAAGGTATGTCTTTGAATTTATAAATATGAATAACTGTTTTACCATGATTGAATGTTATGTTATTGAGACTGATTTGAATGATTAAATGTGATCCCTACCTTATGGGCAGCAAAGGACTAGACTGAATTAGAGAATCCTCTTATGTTGTAGTACTGAGGAATATGCCGCCAAGAGGAAGAGGAAAAGGTCGAGGTAGGGGAAGTGGCAGAGGTAGGGTGGCAGGAAGAGTAGGTAACCTACCACCAGAGAACCAAGAGGAGATCCTCCAACCTATATCGAACCTTCTGCATGATCAACTAGGTCGTCAAGAAGATATTCCTTTAGCAACCCCAACATGGGGACAGACTAATCCAAATGTTATGACCATGATGGTGGAGGCAATGCAGGCCTTAGTGCGAGCTACAGTGGCCACCCAGTTGGCTCAGACAGGTCAAGTACAAAATGATGTGTCAATTGAGCTCAGATACCTAAAAGATTTTAGGAAATATGACCCACGACCGTTTGATGGGTCTTCCCATGATCCTACAGTGGCGGAGTTATGGGTGTCCTCGATTGAAACAATTTTTAGATTGACGAATTGCTTGGAATACCGGAGGGTATCTTGTGCAGCTTTTATGTTGAGAGATGATACCTATTTGTGATGGGAGTCCGCTCAAAGGACCATGGACACTAATGGAGAACTAATCACTTGGAATATGTTTAGAGAGGCATTCTGGCACAAATTTTACCCAACCACGACTCAGTATAGGAAGCAAGTTGAGTTCCTACAACTCTGTCAGAATAGAAGACCTATAGAGGATTATGAGAGAGAATTCACACAATTAATGCGTTTTGCTCCAGAACTGGTGGACACCGAGGCTAAGTAAGTAGAACAAATTGTTATGGGACTAGATGAGGGTATTCGAGGATTCATTCTGCACTTTCACCCCCGGATTATGCTTCAGCAGTAAGAGTAGTTGAATTGATTGGTGTTCAGTCTCATAGTGTGCAACAGGAAATAGTTAACCCGAGTCAGCCACTTTCAGGCTATAAAAGGAAGTGGGATTAGGAAGGTTCTGATCTCCAGCTTTATCAGCAACCTTCGAGATCATCGAACGATTCACATTCCACCCCTAGTCAGAGACAACCAGTTCGAACAGGTAAAGATGTGGTGAGAAACCACGCTATAAGGAATGTGGAAGATATCATTGGGGCAAGTGTTTAGCTCGTTTTAGGGAATGTTTCAGATGCAAGAAAGAGGGGCACAGAGCAGAGAGTTGTCTCAATCAAGGTACCATGGATGATCAACCTTCCTGATCGAATGGAGCTGGATCTTTTGAACAAACGACTGAACAAGGAAGAGCTTTTGCCAGTACAAGTCGAGACACTAGCAACTTCGATCCAACGATCACAAGTACATTTCTCGTACTTAGATACTTTATTTAACTTCCCTCCAGGATGTATACATTTGTTGTTCTATGCATGTTTTAGAGTTAGGGTTGCTAACTTTTGTCTGGTGGTTGCCACTTCGATGGGAGTGAGTTGTTTGGTTATTGAAATGATTAAAGTTTTAAGTTGA

Coding sequence (CDS)

ATGCCGCCAAGAGGAAGAGGAAAAGGTCGAGGTAGGGGAAGTGGCAGAGGTAGGGTGGCAGGAAGAGTAGGTAACCTACCACCAGAGAACCAAGAGGAGATCCTCCAACCTATATCGAACCTTCTGCATGATCAACTAGGTCGTCAAGAAGATATTCCTTTAGCAACCCCAACATGGGGACAGACTAATCCAAATGTTATGACCATGATGGTGGAGGCAATGCAGGCCTTAGTGCGAGCTACAGTGGCCACCCAGTTGGCTCAGACAGGTCAAGTACAAAATGATGTGTCAATTGAGCTCAGATACCTAAAAGATTTTAGGAAATATGACCCACGACCGTTTGATGGGTCTTCCCATGATCCTACAGTGGCGGAGTTATGGGTGTCCTCGATTGAAACAATTTTTAGATTGACGAATTGCTTGGAATACCGGAGGGTATCTTGTGCAGCTTTTATGTTGAGAGATGATACCTATTTGTGA

Protein sequence

MPPRGRGKGRGRGSGRGRVAGRVGNLPPENQEEILQPISNLLHDQLGRQEDIPLATPTWGQTNPNVMTMMVEAMQALVRATVATQLAQTGQVQNDVSIELRYLKDFRKYDPRPFDGSSHDPTVAELWVSSIETIFRLTNCLEYRRVSCAAFMLRDDTYL

Homology

[Close]

BLAST of Tan0003340 vs. NCBI nr
Match: XP_022156662.1 (uncharacterized protein LOC111023512 [Momordica charantia])

HSP 1 Score: 104.4 bits (259), Expect = 9.4e-19
Identity = 47/89 (52.81%), Postives = 64/89 (71.91%), Query Frame = 0


Query: 71  VEAMQALVRATVATQLAQTGQVQNDVSIELRYLKDFRKYDPRPFDGSSHDPTVAELWVSS 130
           +E +Q LV+ TV+ Q+ Q  Q +  +SIE +YL+DF+KYDPR FDG S DP +AE W+S 
Sbjct: 1   METLQTLVQTTVSNQMTQLTQNRGSISIEAKYLRDFKKYDPRSFDGLSVDPMLAEAWLSL 60

Query: 131 IETIFRLTNCLEYRRVSCAAFMLRDDTYL 160
           +ETIFR   CLE ++V C  FML+DD +L
Sbjct: 61  METIFRYMRCLEEQKVQCDVFMLKDDAFL 89

[Close]

BLAST of Tan0003340 vs. NCBI nr
Match: XP_022938329.1 (uncharacterized protein LOC111444463 [Cucurbita moschata])

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-17
Identity = 69/160 (43.12%), Postives = 89/160 (55.62%), Query Frame = 0


Query: 1   MPPRGRGKG-RGRGSGRGRVAGRVGNLPPENQEEILQPISNLLHDQLGRQEDIPLATPTW 60
           MPPR RG G RGR   +GR  GR  N   EN  E  QP+              P A P  
Sbjct: 1   MPPRTRGGGLRGRPPLKGRGRGRGHNGRRENFVE--QPVP-------------PPAAP-- 60

Query: 61  GQTNPNVMTMMVEAMQALVRATVATQLAQTGQVQNDVSIELRYLKDFRKYDPRPFDGSSH 120
            Q  PN    +V+A+Q +++   A Q A      +  ++E +YL+DF++ DPR F G+S 
Sbjct: 61  -QAAPNPTAALVDALQVVIQNLTANQQANA----STSTMEAKYLRDFKRGDPRTFKGTSD 120

Query: 121 DPTVAELWVSSIETIFRLTNCLEYRRVSCAAFMLRDDTYL 160
           DPTVA++W+ SIET+F LTNC E  RV CA FMLR D  L
Sbjct: 121 DPTVAQMWLRSIETVFWLTNCPEAHRVECATFMLRKDAEL 138

[Close]

BLAST of Tan0003340 vs. NCBI nr
Match: XP_031744976.1 (uncharacterized protein LOC116405198 [Cucumis sativus])

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-17
Identity = 71/168 (42.26%), Postives = 92/168 (54.76%), Query Frame = 0


Query: 1   MPP-----RGRGKGRGRGS-GRGRVAGRVGNLPPENQEEILQPISNLLHDQLGRQEDIPL 60
           MPP     RG  +GRGRG+ GRGR AGR  N P E Q E   P + + H       +   
Sbjct: 13  MPPREEVRRGGRRGRGRGAGGRGRGAGR--NQPTEGQAEQRIPAAPVTH------VEFDA 72

Query: 61  ATPTWGQTNPNVMTMMVEAMQA-------LVRATVATQLAQTGQVQNDVSIELRYLKDFR 120
            +    Q    +MT + +  QA       +V    A   AQ  ++ N +S E ++L+DFR
Sbjct: 73  LSAHMEQRFTELMTAIAQNQQAPAVPPAPVVPPAPAAPPAQ--ELPNQLSAEAKHLRDFR 132

Query: 121 KYDPRPFDGSSHDPTVAELWVSSIETIFRLTNCLEYRRVSCAAFMLRD 156
           KYDP+ FDGS  DPT AE+W+SS+ETIF    C E  RV CAAF+LRD
Sbjct: 133 KYDPQTFDGSLEDPTKAEMWLSSVETIFNYMRCPEEHRVQCAAFLLRD 170

[Close]

BLAST of Tan0003340 vs. NCBI nr
Match: XP_031737529.1 (uncharacterized protein LOC116402422 [Cucumis sativus])

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-17
Identity = 71/168 (42.26%), Postives = 92/168 (54.76%), Query Frame = 0


Query: 1   MPP-----RGRGKGRGRGS-GRGRVAGRVGNLPPENQEEILQPISNLLHDQLGRQEDIPL 60
           MPP     RG  +GRGRG+ GRGR AGR  N P E Q E   P + + H       +   
Sbjct: 13  MPPREEVRRGGRRGRGRGAGGRGRGAGR--NQPTEGQAEQQIPAAPVTH------VEFDA 72

Query: 61  ATPTWGQTNPNVMTMMVEAMQA-------LVRATVATQLAQTGQVQNDVSIELRYLKDFR 120
            +    Q    +MT + +  QA       +V    A   AQ  ++ N +S E ++L+DFR
Sbjct: 73  LSAHMEQRFTELMTAIAQNQQAPAVPPAPVVPPAPAAPPAQ--ELPNQLSAEAKHLRDFR 132

Query: 121 KYDPRPFDGSSHDPTVAELWVSSIETIFRLTNCLEYRRVSCAAFMLRD 156
           KYDP+ FDGS  DPT AE+W+SS+ETIF    C E  RV CAAF+LRD
Sbjct: 133 KYDPQTFDGSLEDPTKAEMWLSSVETIFNYMRCPEEHRVQCAAFLLRD 170

[Close]

BLAST of Tan0003340 vs. NCBI nr
Match: XP_031742890.1 (uncharacterized protein LOC116404512 [Cucumis sativus])

HSP 1 Score: 99.4 bits (246), Expect = 3.0e-17
Identity = 73/181 (40.33%), Postives = 90/181 (49.72%), Query Frame = 0


Query: 1   MPPRG-------RGKGRGRGSGRGRVAGRVGNLPPENQEEILQPISNLLHDQ-------- 60
           MPPRG       RG+GRG G GRGR AGR  N P E Q E   P + + H +        
Sbjct: 49  MPPRGGVRRGGRRGRGRGAG-GRGRGAGR--NQPTEGQAEQRIPAAPVTHVEFDALSAHM 108

Query: 61  ----------LGRQEDIPLATPTWGQTNPNVMTMMVEAMQALVRATVATQLAQTGQV-QN 120
                     + R +  P   P        V+  +  A  A          AQ  Q+  N
Sbjct: 109 EQRFTELMTAIARNQQAPAVPPA------PVVPPVPAAPPAPAAPPAQGLAAQQPQILPN 168

Query: 121 DVSIELRYLKDFRKYDPRPFDGSSHDPTVAELWVSSIETIFRLTNCLEYRRVSCAAFMLR 156
            +S E ++L+DFRKYDP+ FDGS  DPT AELW+SS+ETIF    C E  RV CAAF+LR
Sbjct: 169 QLSAEAKHLRDFRKYDPQTFDGSLEDPTKAELWLSSVETIFNYMRCPEEHRVQCAAFLLR 220

[Close]

BLAST of Tan0003340 vs. ExPASy TrEMBL
Match: A0A6J1DSJ6 (uncharacterized protein LOC111023512 OS=Momordica charantia OX=3673 GN=LOC111023512 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 4.6e-19
Identity = 47/89 (52.81%), Postives = 64/89 (71.91%), Query Frame = 0


Query: 71  VEAMQALVRATVATQLAQTGQVQNDVSIELRYLKDFRKYDPRPFDGSSHDPTVAELWVSS 130
           +E +Q LV+ TV+ Q+ Q  Q +  +SIE +YL+DF+KYDPR FDG S DP +AE W+S 
Sbjct: 1   METLQTLVQTTVSNQMTQLTQNRGSISIEAKYLRDFKKYDPRSFDGLSVDPMLAEAWLSL 60

Query: 131 IETIFRLTNCLEYRRVSCAAFMLRDDTYL 160
           +ETIFR   CLE ++V C  FML+DD +L
Sbjct: 61  METIFRYMRCLEEQKVQCDVFMLKDDAFL 89

[Close]

BLAST of Tan0003340 vs. ExPASy TrEMBL
Match: A0A6J1FDR9 (uncharacterized protein LOC111444463 OS=Cucurbita moschata OX=3662 GN=LOC111444463 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 6.6e-18
Identity = 69/160 (43.12%), Postives = 89/160 (55.62%), Query Frame = 0


Query: 1   MPPRGRGKG-RGRGSGRGRVAGRVGNLPPENQEEILQPISNLLHDQLGRQEDIPLATPTW 60
           MPPR RG G RGR   +GR  GR  N   EN  E  QP+              P A P  
Sbjct: 1   MPPRTRGGGLRGRPPLKGRGRGRGHNGRRENFVE--QPVP-------------PPAAP-- 60

Query: 61  GQTNPNVMTMMVEAMQALVRATVATQLAQTGQVQNDVSIELRYLKDFRKYDPRPFDGSSH 120
            Q  PN    +V+A+Q +++   A Q A      +  ++E +YL+DF++ DPR F G+S 
Sbjct: 61  -QAAPNPTAALVDALQVVIQNLTANQQANA----STSTMEAKYLRDFKRGDPRTFKGTSD 120

Query: 121 DPTVAELWVSSIETIFRLTNCLEYRRVSCAAFMLRDDTYL 160
           DPTVA++W+ SIET+F LTNC E  RV CA FMLR D  L
Sbjct: 121 DPTVAQMWLRSIETVFWLTNCPEAHRVECATFMLRKDAEL 138

[Close]

BLAST of Tan0003340 vs. ExPASy TrEMBL
Match: A0A5A7UP36 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold9731G00040 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.0e-15
Identity = 66/159 (41.51%), Postives = 83/159 (52.20%), Query Frame = 0


Query: 1   MPPRGRGKGRGRGSGRGRVAGRVGNLPPENQ--EEILQPISNLLHDQLGRQED--IPLAT 60
           MPPR RG  RG   G+GR AGRV    PE Q   +   P + + H  L   E     L  
Sbjct: 295 MPPR-RGARRGGRGGQGRGAGRV---QPEVQPVAQATDPAAPVTHADLAAMEQRFRDLIM 354

Query: 61  PTWGQTNPNVMTMMVEAMQALVRATVATQLAQTGQVQNDVSIELRYLKDFRKYDPRPFDG 120
             W Q  P           A   A VA Q+     V + +S + ++L+DFRKY+P  FDG
Sbjct: 355 HMWEQQQPAPPAPAPAPAPAPAPAPVAPQV-----VPDQLSAKAKHLRDFRKYNPTTFDG 414

Query: 121 SSHDPTVAELWVSSIETIFRLTNCLEYRRVSCAAFMLRD 156
           S  DPT A+LW+SS+ETIFR   C E ++V CA FML D
Sbjct: 415 SLEDPTRAQLWLSSLETIFRYMKCAEDQKVQCAVFMLTD 444

[Close]

BLAST of Tan0003340 vs. ExPASy TrEMBL
Match: A0A5A7T0M7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002220 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.4e-15
Identity = 65/159 (40.88%), Postives = 81/159 (50.94%), Query Frame = 0


Query: 1   MPPRGRGKGRGRGSGRGRVAGRVGNLPPENQ--EEILQPISNLLHDQLGRQED--IPLAT 60
           MPPR RG  RG   GRGR AGRV    PE Q   +   P +++ H  L   E     L  
Sbjct: 167 MPPR-RGARRGGRGGRGRGAGRV---QPEVQPVAQAFDPAASVTHADLAAMEQRFRDLIM 226

Query: 61  PTWGQTNPNVMTMMVEAMQALVRATVATQLAQTGQVQNDVSIELRYLKDFRKYDPRPFDG 120
             W Q  P           A     V  Q+     V + +S E ++L+DFRKY+P  FDG
Sbjct: 227 QMWEQQQPAPPAPAPAPAPAPTPVPVVPQV-----VPDQLSAEAKHLRDFRKYNPTTFDG 286

Query: 121 SSHDPTVAELWVSSIETIFRLTNCLEYRRVSCAAFMLRD 156
           S  DPT A+LW+SS+ETIFR   C E ++V C  FML D
Sbjct: 287 SLEDPTRAQLWLSSLETIFRYMKCPEDQKVQCVVFMLTD 316

[Close]

BLAST of Tan0003340 vs. ExPASy TrEMBL
Match: A0A5A7V810 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G002410 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.4e-15
Identity = 66/158 (41.77%), Postives = 84/158 (53.16%), Query Frame = 0


Query: 1   MPPRGRGKGRGRGSGRGRVAGRVGNLPPENQ--EEILQPISNLLHDQLGRQEDIPLATPT 60
           MPPR RG  RG   GRGR AGRV    PE Q   +   P + + H  L   E        
Sbjct: 499 MPPR-RGARRGGRGGRGRGAGRV---QPEVQPVAQATDPAAPVTHADLAAME-------- 558

Query: 61  WGQTNPNVMTMMVEAMQALVRATVATQLAQTGQVQND-VSIELRYLKDFRKYDPRPFDGS 120
             Q   +++  M E  Q    A V   +    QV +D +S E ++L+DFRKY+P  FDGS
Sbjct: 559 --QRFRDLIMQMREQQQPAPPAPVPAPVPVVPQVASDQLSAEAKHLRDFRKYNPTTFDGS 618

Query: 121 SHDPTVAELWVSSIETIFRLTNCLEYRRVSCAAFMLRD 156
             DPT A+LW+ S+ETIFR   C E ++V CA FML D
Sbjct: 619 LEDPTRAQLWLLSLETIFRYMKCPEDQKVQCAVFMLTD 642

The following BLAST results are available for this feature:

BLAST of Tan0003340 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0003340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156662.1	9.4e-19	52.81	uncharacterized protein LOC111023512 [Momordica charantia]	[more]
XP_022938329.1	1.4e-17	43.13	uncharacterized protein LOC111444463 [Cucurbita moschata]	[more]
XP_031744976.1	1.4e-17	42.26	uncharacterized protein LOC116405198 [Cucumis sativus]	[more]
XP_031737529.1	1.4e-17	42.26	uncharacterized protein LOC116402422 [Cucumis sativus]	[more]
XP_031742890.1	3.0e-17	40.33	uncharacterized protein LOC116404512 [Cucumis sativus]	[more]

BLAST of Tan0003340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DSJ6	4.6e-19	52.81	uncharacterized protein LOC111023512 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1FDR9	6.6e-18	43.13	uncharacterized protein LOC111444463 OS=Cucurbita moschata OX=3662 GN=LOC1114444...	[more]
A0A5A7UP36	1.0e-15	41.51	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold97...	[more]
A0A5A7T0M7	1.4e-15	40.88	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57...	[more]
A0A5A7V810	1.4e-15	41.77	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold32...	[more]

BLAST of Tan0003340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0003340.1	Tan0003340.1	mRNA
Tan0003340.2	Tan0003340.2	mRNA
Tan0003340.3	Tan0003340.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
molecular_function	GO:0003824	catalytic activity