Tan0003338 (gene) Snake gourd v1

Overview


Name	Tan0003338
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Copper ion binding protein
Location	LG10: 1711873 .. 1714979 (-)
RNA-Seq Expression	Tan0003338
Synteny	Tan0003338

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTTGTTTACTGTATTTCAAGAAAAACCCTAGACAATGTTATGTTTGATGCTGAAGCTGGTGAAGAAGGGCATTTGCTCGGAGCTTTGAGAGATGATCCGTTTCACGAAATTGAAATCTCTAGCCCTAACTGCAGATTCCGGCAGCCACCAATTGCTTCAAAGATGCTGGGTTAGTGGCACTGCCAAAGGAAAATCGAAGATCAAAGCTGGGCAACAGCTTAAGCGCTCCAAAATCACCATCAAGAAGGGCGGAGCTGCCTCTTCCAAAGGTGGTGGAGGAGGAGGAGGAGGAAGAAGAATCCCTCCCGAACAGGAAAAGCTCTATGACCAATGCCTAAATGCTCCTACTCCTCTGCGGTTCTTGAAGCCCAGAGATAGAGAACGCGAGGGGGAGCGGGAGAAGCTGGGACTCATCAGCAAAGAGCGCCAACGCGAGATTGAGATGATGAAGATGGATAAATCGAAATTGGGCATTTCTGATTCTCCATCGATCATTGGAACTATGGGTTTGGATCTGATATCGCTAGGTGTGGTCGATGCGGATAAGATTCCGAAGTATGAACTGACAGTGGAAGATGGGCGGCGGCTTGCGAAGGAATACAGTCGGGTGTTGATGAGGCGGCACCGTGCAAGGCAGGCAGCTGAATCAACGCTGTTGCAGATGAAGAAAGATGCCATTGAAGCATTGCCAGAGCATTTGAAAGCTGCTGCTTTGATCCCAGATTTAACTCCGTTTCCAGCAAATCGGTTCATGGCGACTTTGACACCTCCAATAGAAGGCTACATTGAAAAGGTTAAGGAAGCAGCGAGGAGGAGTAGCGGGAAAGAGAAGCTCAGATGATCAGAGAGGTCAGGGATTTCTTTTGCTCTTTTTCTAATGTCCTAAACTTGTCCTGTTGGTTGGCCTCTTGATTATCCAAGTTGTAGTTTATCTCCGGAGACTGCATTGCTTATTCAAATCTATGATCTTCAAGTTCAACTTTGTAATCAAGTCTAGGCAATCTGTTTGGAGTTAAAAACTTATCTGGCTTACTGATGAGCTAGGTAGGAAAAAGAAAAGACTCTTTCCCCTCATTTTAATGGAGTAACATCACGGTGGCTTTCTTTTGTCACAAATTTCCATAATTTTGTTCGTTATGATAATCTTTTAAGGCGTGAGAGTTCCCTTATGGAGGTAATTTATCAAGCATTAACGTGTGCAGGATTTAGCTTCTACCTTCTCAACTGAGGAATCGTTGATTTATGCCCTTCACATTTAACTTCTTGGGAAAACTTATGTGGGATTTCTCATTATTAGGAGTATTTTGTGTCATTACCTAGCCGAGGAATCATTTTATCTTTGAGATAAGTCCGACCCTGTTTTTCCAAGATCCTGGTGTGTTGAATAGCTGAAGCGGAAAAGGATGCATTGTTAAGAAGTCAAAGACATGTTCTATGAATTCCACTGCAGTTTACCAATTAGGTCTTTTCCTTTGCTTCCTCATTTCCTTCAAAGTTAAACAATTACTTTAAAGGACCCAATATCCTCATTAAGCAAGTACAGGCTCTGGCTGCCTCGAGAGTCTTCATTTTCTTCCTCATAATTACTCATTAAATTTATGTTGGTTTGTTTTGGTCGATAGCGGACAGAAGGCCACTCGGAAAGAAAGCACTTTGTGTGGGTTTTACTTGGAACTCTAAAGTTTTCCATGGTCAAATGGTCTTTCACCTAAAAGGAGCCATACAATTTTGCTTTTTATAAGAATGCCTTTGACTATATGACCACATGATGAAGATATTCCCAACCCCCAGGATGACCCAAATTCCCAAACTAAGTGAATACGCCAATTTTTATCTTCTTATTCATAAAAATGCATATTTGAATGTGAAGTATTATAAGCCTTGTTTGATAATCATTTGTTTTTTGAAAATTGTATTTGTTTTCTCCCTATTTCTTTAATGTGGTTTTCATCTTCCTTAAGAAAACATTTGGATTCTTAGTAAAGTTCCAAAAAACAAAAACAAGTTTTTAGAAACTATTTTTTATAGTTTTCAAAACTTGACATAGATTTTGAAAATATTTACAAGAAGTAGATAATAAAACAAAGGTTATAGCTTAATTTTCATAAACAAAAAACTAAATGGTTATCAAACTGAGTTGTAGATGTCTGCTGGCATGGAAACATTTATCCCGATGAATTGGTAGACTAAACTTGTAGTTCCTTACTATTTTCTGGTTATCATGGTTGTGTTTATAGTCTATGATAAACTAAACCTTTGGTTTCTTTGGATCAATTTCACTTGTGCTTTTCTATGGAATTTTTGGCTTGAGAGAAATGCTCAGGTTTTCACAGATAAGCACCATAACATTCAAACCTTCATAGACTCAACTTCCTATCATACTTTATCGTGGAGTATTTTATCTCCCCCTTTTGTAATTATAGCTTAACAACCCTTTTATCATTGGAGATCTTTTTTGTCACTATCATAGATAGGACTACTTTTGTATCTATTTCACTCATCAATGAAATGGTTTCTCTGTTTCCTATATAAAAAAAAATGATAAACTAAACCTTTCTTGTCTCTCTGATGATTTGTTATCTGTTTTAGTTTTTTTTCTGTTCACTACTACTATTTTACTCCGGGAATCTGAAGATGTAGTAATATTTGCTCGTAAGAGATTGATAGCTGATGAGATTTGTGGTTGCATCCCACTTTGATTAATCATTTATTTCCTCTGTTGCAACCACATTGATTATTTTTCTTCTTGTTTTCCTTTGGTTGCATTAGTTCAACTGAGGCAGTAGATGAAAGCCTACATTAATTAGGAAAAGAAGAGTTTGTAGCAGTTACTAGAGTCTGAAAACCAAGCTCGTGGTTGCATTTCAAGGGAGCCACAAAGCAGCCTTTGGATGTCATACAATAAAAATCTCCAGAATTTTTGGCTCCTGTAACTTCAAGACTCTTTCAAGCCTATTCTAAGAGCAAGATGCTTCCTTCATTACTATAAATTTTTTGGGGAGAATTTTGGGTCTTTGTTTTCGGATCGCAATGTAAGCATCCCATATCATGTTTGATTGGATTCACTCACTGTCTAAAATTGTCTGATTTGTTCTATTAATAAT

mRNA sequence

GTTTTTGTTTACTGTATTTCAAGAAAAACCCTAGACAATGTTATGTTTGATGCTGAAGCTGGTGAAGAAGGGCATTTGCTCGGAGCTTTGAGAGATGATCCGTTTCACGAAATTGAAATCTCTAGCCCTAACTGCAGATTCCGGCAGCCACCAATTGCTTCAAAGATGCTGGGTTAGTGGCACTGCCAAAGGAAAATCGAAGATCAAAGCTGGGCAACAGCTTAAGCGCTCCAAAATCACCATCAAGAAGGGCGGAGCTGCCTCTTCCAAAGGTGGTGGAGGAGGAGGAGGAGGAAGAAGAATCCCTCCCGAACAGGAAAAGCTCTATGACCAATGCCTAAATGCTCCTACTCCTCTGCGGTTCTTGAAGCCCAGAGATAGAGAACGCGAGGGGGAGCGGGAGAAGCTGGGACTCATCAGCAAAGAGCGCCAACGCGAGATTGAGATGATGAAGATGGATAAATCGAAATTGGGCATTTCTGATTCTCCATCGATCATTGGAACTATGGGTTTGGATCTGATATCGCTAGGTGTGGTCGATGCGGATAAGATTCCGAAGTATGAACTGACAGTGGAAGATGGGCGGCGGCTTGCGAAGGAATACAGTCGGGTGTTGATGAGGCGGCACCGTGCAAGGCAGGCAGCTGAATCAACGCTGTTGCAGATGAAGAAAGATGCCATTGAAGCATTGCCAGAGCATTTGAAAGCTGCTGCTTTGATCCCAGATTTAACTCCGTTTCCAGCAAATCGGTTCATGGCGACTTTGACACCTCCAATAGAAGGCTACATTGAAAAGGTTAAGGAAGCAGCGAGGAGGAGTAGCGGGAAAGAGAAGCTCAGATGATCAGAGAGTTCAACTGAGGCAGTAGATGAAAGCCTACATTAATTAGGAAAAGAAGAGTTTGTAGCAGTTACTAGAGTCTGAAAACCAAGCTCGTGGTTGCATTTCAAGGGAGCCACAAAGCAGCCTTTGGATGTCATACAATAAAAATCTCCAGAATTTTTGGCTCCTGTAACTTCAAGACTCTTTCAAGCCTATTCTAAGAGCAAGATGCTTCCTTCATTACTATAAATTTTTTGGGGAGAATTTTGGGTCTTTGTTTTCGGATCGCAATGTAAGCATCCCATATCATGTTTGATTGGATTCACTCACTGTCTAAAATTGTCTGATTTGTTCTATTAATAAT

Coding sequence (CDS)

ATGATCCGTTTCACGAAATTGAAATCTCTAGCCCTAACTGCAGATTCCGGCAGCCACCAATTGCTTCAAAGATGCTGGGTTAGTGGCACTGCCAAAGGAAAATCGAAGATCAAAGCTGGGCAACAGCTTAAGCGCTCCAAAATCACCATCAAGAAGGGCGGAGCTGCCTCTTCCAAAGGTGGTGGAGGAGGAGGAGGAGGAAGAAGAATCCCTCCCGAACAGGAAAAGCTCTATGACCAATGCCTAAATGCTCCTACTCCTCTGCGGTTCTTGAAGCCCAGAGATAGAGAACGCGAGGGGGAGCGGGAGAAGCTGGGACTCATCAGCAAAGAGCGCCAACGCGAGATTGAGATGATGAAGATGGATAAATCGAAATTGGGCATTTCTGATTCTCCATCGATCATTGGAACTATGGGTTTGGATCTGATATCGCTAGGTGTGGTCGATGCGGATAAGATTCCGAAGTATGAACTGACAGTGGAAGATGGGCGGCGGCTTGCGAAGGAATACAGTCGGGTGTTGATGAGGCGGCACCGTGCAAGGCAGGCAGCTGAATCAACGCTGTTGCAGATGAAGAAAGATGCCATTGAAGCATTGCCAGAGCATTTGAAAGCTGCTGCTTTGATCCCAGATTTAACTCCGTTTCCAGCAAATCGGTTCATGGCGACTTTGACACCTCCAATAGAAGGCTACATTGAAAAGGTTAAGGAAGCAGCGAGGAGGAGTAGCGGGAAAGAGAAGCTCAGATGA

Protein sequence

MIRFTKLKSLALTADSGSHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKGGGGGGGGRRIPPEQEKLYDQCLNAPTPLRFLKPRDREREGEREKLGLISKERQREIEMMKMDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRARQAAESTLLQMKKDAIEALPEHLKAAALIPDLTPFPANRFMATLTPPIEGYIEKVKEAARRSSGKEKLR

Homology

[Close]

BLAST of Tan0003338 vs. NCBI nr
Match: XP_022980123.1 (uncharacterized protein LOC111479606 [Cucurbita maxima])

HSP 1 Score: 443.0 bits (1138), Expect = 1.7e-120
Identity = 234/249 (93.98%), Postives = 241/249 (96.79%), Query Frame = 0


Query: 1   MIRFTKLKSLALTADSGSHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60
           MIRF KLKSL  +ADSGSH LLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSK 
Sbjct: 1   MIRFAKLKSLVPSADSGSHHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSK- 60

Query: 61  GGGGGGGRRIPPEQEKLYDQCLNAPTPLRFLKPRDREREGEREKLGLISKERQREIEMMK 120
           GGGGGGGR+I PEQEKLYDQCLNAPTPLRFLKP+DRERE EREKLGLISKERQREIEMMK
Sbjct: 61  GGGGGGGRKISPEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMK 120

Query: 121 MDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA 180
           MDKSKLG+SDSPSIIGTMGLDLI+LGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA
Sbjct: 121 MDKSKLGVSDSPSIIGTMGLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA 180

Query: 181 RQAAESTLLQMKKDAIEALPEHLKAAALIPDLTPFPANRFMATLTPPIEGYIEKVKEAAR 240
           RQAAESTLLQMKKDAIEALPEHLKAAAL+PDLTPFPANRFMATLTPPIEGYIEKVKEAA+
Sbjct: 181 RQAAESTLLQMKKDAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKVKEAAK 240

Query: 241 RSSGKEKLR 250
            SSGKEKLR
Sbjct: 241 SSSGKEKLR 248

[Close]

BLAST of Tan0003338 vs. NCBI nr
Match: XP_038906439.1 (uncharacterized protein LOC120092349 [Benincasa hispida])

HSP 1 Score: 437.2 bits (1123), Expect = 9.6e-119
Identity = 229/249 (91.97%), Postives = 240/249 (96.39%), Query Frame = 0


Query: 1   MIRFTKLKSLALTADSGSHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60
           MIRFTK KSLAL+ADSG HQLLQRCWVSGTAKGKSKIKAGQ LKRSKIT+KKGGA S   
Sbjct: 1   MIRFTKFKSLALSADSGGHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGATSK-- 60

Query: 61  GGGGGGGRRIPPEQEKLYDQCLNAPTPLRFLKPRDREREGEREKLGLISKERQREIEMMK 120
           GGGGGGGR+IPPEQEKLYDQCLNAPTPLRFLKP+DRERE EREKLGLISKERQREIEMMK
Sbjct: 61  GGGGGGGRKIPPEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMK 120

Query: 121 MDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA 180
           MDKSKLG+SD+PSIIGT+GLDLISLG+VDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA
Sbjct: 121 MDKSKLGVSDTPSIIGTVGLDLISLGLVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA 180

Query: 181 RQAAESTLLQMKKDAIEALPEHLKAAALIPDLTPFPANRFMATLTPPIEGYIEKVKEAAR 240
           R+AAESTLLQMKK+AIEALPEHLKAAAL+PDLT FPANRFMATLTPPIEGYIEKVKEAAR
Sbjct: 181 RRAAESTLLQMKKEAIEALPEHLKAAALVPDLTLFPANRFMATLTPPIEGYIEKVKEAAR 240

Query: 241 RSSGKEKLR 250
           RSSGKEKLR
Sbjct: 241 RSSGKEKLR 247

[Close]

BLAST of Tan0003338 vs. NCBI nr
Match: XP_022924790.1 (uncharacterized protein LOC111432182 [Cucurbita moschata] >KAG6582653.1 hypothetical protein SDJN03_22655, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019050.1 hypothetical protein SDJN02_20927, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 436.8 bits (1122), Expect = 1.3e-118
Identity = 231/249 (92.77%), Postives = 240/249 (96.39%), Query Frame = 0


Query: 1   MIRFTKLKSLALTADSGSHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60
           MIRF KLKSL  +ADSGS+ LLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSK 
Sbjct: 1   MIRFAKLKSLVPSADSGSYHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSK- 60

Query: 61  GGGGGGGRRIPPEQEKLYDQCLNAPTPLRFLKPRDREREGEREKLGLISKERQREIEMMK 120
           GGGGGGGR+I  EQEKLYDQCLNAPTPLRFLKP+DRERE EREKLGLISKERQREIEMMK
Sbjct: 61  GGGGGGGRKISLEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMK 120

Query: 121 MDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA 180
           MDKSKLG+SDSPSIIGTMGLDLI+LGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA
Sbjct: 121 MDKSKLGVSDSPSIIGTMGLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA 180

Query: 181 RQAAESTLLQMKKDAIEALPEHLKAAALIPDLTPFPANRFMATLTPPIEGYIEKVKEAAR 240
           RQAAESTLLQMKKDAIEALPEHLKAAAL+PDLTPFPANRFMATLTPPIEGYIEK+ EAA+
Sbjct: 181 RQAAESTLLQMKKDAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKINEAAK 240

Query: 241 RSSGKEKLR 250
           RSSGKEKLR
Sbjct: 241 RSSGKEKLR 248

[Close]

BLAST of Tan0003338 vs. NCBI nr
Match: XP_023527048.1 (uncharacterized protein LOC111790399 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 436.0 bits (1120), Expect = 2.1e-118
Identity = 230/249 (92.37%), Postives = 239/249 (95.98%), Query Frame = 0


Query: 1   MIRFTKLKSLALTADSGSHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60
           MIRF KLKSL  +ADSGSH LLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSK 
Sbjct: 1   MIRFAKLKSLVPSADSGSHHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSK- 60

Query: 61  GGGGGGGRRIPPEQEKLYDQCLNAPTPLRFLKPRDREREGEREKLGLISKERQREIEMMK 120
           GGGGGGGR+I  EQEKLYDQCLNAPTPLRFLKP+DRERE EREKLGLISKERQREIEMMK
Sbjct: 61  GGGGGGGRKISLEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMK 120

Query: 121 MDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA 180
           MDKSKLG+SDSPSIIGTMGLDLI+LGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA
Sbjct: 121 MDKSKLGVSDSPSIIGTMGLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA 180

Query: 181 RQAAESTLLQMKKDAIEALPEHLKAAALIPDLTPFPANRFMATLTPPIEGYIEKVKEAAR 240
           RQAAESTLL+MKKDAIEALPEHLKAAAL+PDLTPFPANRFMATLTPPIEGYIEK+ E A+
Sbjct: 181 RQAAESTLLRMKKDAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKINEVAK 240

Query: 241 RSSGKEKLR 250
           RSSGKEKLR
Sbjct: 241 RSSGKEKLR 248

[Close]

BLAST of Tan0003338 vs. NCBI nr
Match: XP_022147522.1 (uncharacterized protein LOC111016425 [Momordica charantia])

HSP 1 Score: 430.6 bits (1106), Expect = 9.0e-117
Identity = 226/249 (90.76%), Postives = 237/249 (95.18%), Query Frame = 0


Query: 1   MIRFTKLKSLALTADSGSHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60
           MIR TKLKS+A  ADSG HQL+QRCWVSGTAKGK+KIK GQQLKRSKITIKKGGAA SK 
Sbjct: 1   MIRLTKLKSVAEFADSGRHQLIQRCWVSGTAKGKAKIKGGQQLKRSKITIKKGGAAPSK- 60

Query: 61  GGGGGGGRRIPPEQEKLYDQCLNAPTPLRFLKPRDREREGEREKLGLISKERQREIEMMK 120
              GGGGR++PPEQEKLYDQCLNAPTPLRFLKP+DRERE EREKLGLISK+RQREIEMMK
Sbjct: 61  ---GGGGRKMPPEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKDRQREIEMMK 120

Query: 121 MDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA 180
           MDKSKLGISDSPSI+GT+GLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA
Sbjct: 121 MDKSKLGISDSPSILGTVGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA 180

Query: 181 RQAAESTLLQMKKDAIEALPEHLKAAALIPDLTPFPANRFMATLTPPIEGYIEKVKEAAR 240
           RQAAESTLLQMKKDAIEALPEHLKAAA++PDLTPFP NRFMATLTPPIEGYIEKVKEAAR
Sbjct: 181 RQAAESTLLQMKKDAIEALPEHLKAAAMVPDLTPFPPNRFMATLTPPIEGYIEKVKEAAR 240

Query: 241 RSSGKEKLR 250
           RSSGKEKLR
Sbjct: 241 RSSGKEKLR 245

[Close]

BLAST of Tan0003338 vs. ExPASy TrEMBL
Match: A0A6J1IYC8 (uncharacterized protein LOC111479606 OS=Cucurbita maxima OX=3661 GN=LOC111479606 PE=4 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 8.5e-121
Identity = 234/249 (93.98%), Postives = 241/249 (96.79%), Query Frame = 0


Query: 1   MIRFTKLKSLALTADSGSHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60
           MIRF KLKSL  +ADSGSH LLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSK 
Sbjct: 1   MIRFAKLKSLVPSADSGSHHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSK- 60

Query: 61  GGGGGGGRRIPPEQEKLYDQCLNAPTPLRFLKPRDREREGEREKLGLISKERQREIEMMK 120
           GGGGGGGR+I PEQEKLYDQCLNAPTPLRFLKP+DRERE EREKLGLISKERQREIEMMK
Sbjct: 61  GGGGGGGRKISPEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMK 120

Query: 121 MDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA 180
           MDKSKLG+SDSPSIIGTMGLDLI+LGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA
Sbjct: 121 MDKSKLGVSDSPSIIGTMGLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA 180

Query: 181 RQAAESTLLQMKKDAIEALPEHLKAAALIPDLTPFPANRFMATLTPPIEGYIEKVKEAAR 240
           RQAAESTLLQMKKDAIEALPEHLKAAAL+PDLTPFPANRFMATLTPPIEGYIEKVKEAA+
Sbjct: 181 RQAAESTLLQMKKDAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKVKEAAK 240

Query: 241 RSSGKEKLR 250
            SSGKEKLR
Sbjct: 241 SSSGKEKLR 248

[Close]

BLAST of Tan0003338 vs. ExPASy TrEMBL
Match: A0A6J1EG20 (uncharacterized protein LOC111432182 OS=Cucurbita moschata OX=3662 GN=LOC111432182 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 6.1e-119
Identity = 231/249 (92.77%), Postives = 240/249 (96.39%), Query Frame = 0


Query: 1   MIRFTKLKSLALTADSGSHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60
           MIRF KLKSL  +ADSGS+ LLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSK 
Sbjct: 1   MIRFAKLKSLVPSADSGSYHLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSK- 60

Query: 61  GGGGGGGRRIPPEQEKLYDQCLNAPTPLRFLKPRDREREGEREKLGLISKERQREIEMMK 120
           GGGGGGGR+I  EQEKLYDQCLNAPTPLRFLKP+DRERE EREKLGLISKERQREIEMMK
Sbjct: 61  GGGGGGGRKISLEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKERQREIEMMK 120

Query: 121 MDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA 180
           MDKSKLG+SDSPSIIGTMGLDLI+LGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA
Sbjct: 121 MDKSKLGVSDSPSIIGTMGLDLITLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA 180

Query: 181 RQAAESTLLQMKKDAIEALPEHLKAAALIPDLTPFPANRFMATLTPPIEGYIEKVKEAAR 240
           RQAAESTLLQMKKDAIEALPEHLKAAAL+PDLTPFPANRFMATLTPPIEGYIEK+ EAA+
Sbjct: 181 RQAAESTLLQMKKDAIEALPEHLKAAALVPDLTPFPANRFMATLTPPIEGYIEKINEAAK 240

Query: 241 RSSGKEKLR 250
           RSSGKEKLR
Sbjct: 241 RSSGKEKLR 248

[Close]

BLAST of Tan0003338 vs. ExPASy TrEMBL
Match: A0A6J1D2K4 (uncharacterized protein LOC111016425 OS=Momordica charantia OX=3673 GN=LOC111016425 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 4.3e-117
Identity = 226/249 (90.76%), Postives = 237/249 (95.18%), Query Frame = 0


Query: 1   MIRFTKLKSLALTADSGSHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60
           MIR TKLKS+A  ADSG HQL+QRCWVSGTAKGK+KIK GQQLKRSKITIKKGGAA SK 
Sbjct: 1   MIRLTKLKSVAEFADSGRHQLIQRCWVSGTAKGKAKIKGGQQLKRSKITIKKGGAAPSK- 60

Query: 61  GGGGGGGRRIPPEQEKLYDQCLNAPTPLRFLKPRDREREGEREKLGLISKERQREIEMMK 120
              GGGGR++PPEQEKLYDQCLNAPTPLRFLKP+DRERE EREKLGLISK+RQREIEMMK
Sbjct: 61  ---GGGGRKMPPEQEKLYDQCLNAPTPLRFLKPKDREREAEREKLGLISKDRQREIEMMK 120

Query: 121 MDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA 180
           MDKSKLGISDSPSI+GT+GLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA
Sbjct: 121 MDKSKLGISDSPSILGTVGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA 180

Query: 181 RQAAESTLLQMKKDAIEALPEHLKAAALIPDLTPFPANRFMATLTPPIEGYIEKVKEAAR 240
           RQAAESTLLQMKKDAIEALPEHLKAAA++PDLTPFP NRFMATLTPPIEGYIEKVKEAAR
Sbjct: 181 RQAAESTLLQMKKDAIEALPEHLKAAAMVPDLTPFPPNRFMATLTPPIEGYIEKVKEAAR 240

Query: 241 RSSGKEKLR 250
           RSSGKEKLR
Sbjct: 241 RSSGKEKLR 245

[Close]

BLAST of Tan0003338 vs. ExPASy TrEMBL
Match: A0A5D3D1D4 (Copper ion binding isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G005240 PE=4 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 1.0e-110
Identity = 214/249 (85.94%), Postives = 234/249 (93.98%), Query Frame = 0


Query: 1   MIRFTKLKSLALTADSGSHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60
           MIRFTK KSL+L ADS +HQLLQRCWVSGTAKGKSKIKAGQ LKRSKIT+KKGGAAS   
Sbjct: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASK-- 60

Query: 61  GGGGGGGRRIPPEQEKLYDQCLNAPTPLRFLKPRDREREGEREKLGLISKERQREIEMMK 120
           GG  GGG++I PE+EKLYDQCLNAPTPLRFLK ++RERE EREKLGL+SKERQREIEMMK
Sbjct: 61  GGDSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMK 120

Query: 121 MDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA 180
           MDKSKLGISDSPSIIGT GLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMR+HRA
Sbjct: 121 MDKSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRA 180

Query: 181 RQAAESTLLQMKKDAIEALPEHLKAAALIPDLTPFPANRFMATLTPPIEGYIEKVKEAAR 240
           R+AAESTLL+MKK+AIEALP+HLKAAAL+PD+TPFPA+RFMATLTPPIEGY+EK+ EAA+
Sbjct: 181 RRAAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAK 240

Query: 241 RSSGKEKLR 250
           RSS KEKLR
Sbjct: 241 RSSAKEKLR 247

[Close]

BLAST of Tan0003338 vs. ExPASy TrEMBL
Match: E5GCH1 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 1.0e-110
Identity = 214/249 (85.94%), Postives = 234/249 (93.98%), Query Frame = 0


Query: 1   MIRFTKLKSLALTADSGSHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60
           MIRFTK KSL+L ADS +HQLLQRCWVSGTAKGKSKIKAGQ LKRSKIT+KKGGAAS   
Sbjct: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASK-- 60

Query: 61  GGGGGGGRRIPPEQEKLYDQCLNAPTPLRFLKPRDREREGEREKLGLISKERQREIEMMK 120
           GG  GGG++I PE+EKLYDQCLNAPTPLRFLK ++RERE EREKLGL+SKERQREIEMMK
Sbjct: 61  GGDSGGGKKISPEEEKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMK 120

Query: 121 MDKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHRA 180
           MDKSKLGISDSPSIIGT GLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMR+HRA
Sbjct: 121 MDKSKLGISDSPSIIGTPGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQHRA 180

Query: 181 RQAAESTLLQMKKDAIEALPEHLKAAALIPDLTPFPANRFMATLTPPIEGYIEKVKEAAR 240
           R+AAESTLL+MKK+AIEALP+HLKAAAL+PD+TPFPA+RFMATLTPPIEGY+EK+ EAA+
Sbjct: 181 RRAAESTLLKMKKEAIEALPDHLKAAALVPDMTPFPADRFMATLTPPIEGYMEKIDEAAK 240

Query: 241 RSSGKEKLR 250
           RSS KEKLR
Sbjct: 241 RSSAKEKLR 247

[Close]

BLAST of Tan0003338 vs. TAIR 10
Match: AT4G05400.1 (copper ion binding )

HSP 1 Score: 282.0 bits (720), Expect = 4.8e-76
Identity = 157/258 (60.85%), Postives = 198/258 (76.74%), Query Frame = 0


Query: 1   MIRFTKLKSLALTADSGSHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60
           MIR TK K++    +S S+ L+QRC  SGT KGK+K+K GQ LKR+K++IKKGG     G
Sbjct: 1   MIRVTKPKAI---IESLSYHLIQRCSASGTPKGKAKLKTGQPLKRNKLSIKKGG-----G 60

Query: 61  GGGG--------GGGRRIPPEQEKLYDQCLNAPTPLRFLKPRDREREGEREKLGLISKER 120
           GGG          G  RI  E++KLY+QCLNAP P+R+L P++ ERE +REKLGLISKE+
Sbjct: 61  GGGAPVEGEEAVKGKGRISDEKQKLYEQCLNAPCPVRYLTPQEIEREAQREKLGLISKEK 120

Query: 121 QREIEMMKM-DKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTVEDGRRLAKEYS 180
           QR++E+ K    + +G++D P  IGT GLD ISLG+ +A+++PKY+LT EDG RLAKEYS
Sbjct: 121 QRDMEIQKKGGAASMGVTDEPMRIGTPGLDYISLGIFEAEELPKYKLTEEDGERLAKEYS 180

Query: 181 RVLMRRHRARQAAESTLLQMKKDAIEALPEHLKAAALIPDLTPFPANRFMATLTPPIEGY 240
           +VLMR HR R+AAE+ LL +KK AIEALPE+LK AAL PDLTPFPANR MATLTPPIEGY
Sbjct: 181 KVLMREHRERRAAETALLNLKKSAIEALPENLKKAALEPDLTPFPANRGMATLTPPIEGY 240

Query: 241 IEKVKEAARRSSGKEKLR 250
           +EKV +AA++SS KEKLR
Sbjct: 241 LEKVMDAAKKSSSKEKLR 250

[Close]

BLAST of Tan0003338 vs. TAIR 10
Match: AT4G05400.2 (copper ion binding )

HSP 1 Score: 282.0 bits (720), Expect = 4.8e-76
Identity = 157/258 (60.85%), Postives = 198/258 (76.74%), Query Frame = 0


Query: 1   MIRFTKLKSLALTADSGSHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60
           MIR TK K++    +S S+ L+QRC  SGT KGK+K+K GQ LKR+K++IKKGG     G
Sbjct: 1   MIRVTKPKAI---IESLSYHLIQRCSASGTPKGKAKLKTGQPLKRNKLSIKKGG-----G 60

Query: 61  GGGG--------GGGRRIPPEQEKLYDQCLNAPTPLRFLKPRDREREGEREKLGLISKER 120
           GGG          G  RI  E++KLY+QCLNAP P+R+L P++ ERE +REKLGLISKE+
Sbjct: 61  GGGAPVEGEEAVKGKGRISDEKQKLYEQCLNAPCPVRYLTPQEIEREAQREKLGLISKEK 120

Query: 121 QREIEMMKM-DKSKLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTVEDGRRLAKEYS 180
           QR++E+ K    + +G++D P  IGT GLD ISLG+ +A+++PKY+LT EDG RLAKEYS
Sbjct: 121 QRDMEIQKKGGAASMGVTDEPMRIGTPGLDYISLGIFEAEELPKYKLTEEDGERLAKEYS 180

Query: 181 RVLMRRHRARQAAESTLLQMKKDAIEALPEHLKAAALIPDLTPFPANRFMATLTPPIEGY 240
           +VLMR HR R+AAE+ LL +KK AIEALPE+LK AAL PDLTPFPANR MATLTPPIEGY
Sbjct: 181 KVLMREHRERRAAETALLNLKKSAIEALPENLKKAALEPDLTPFPANRGMATLTPPIEGY 240

Query: 241 IEKVKEAARRSSGKEKLR 250
           +EKV +AA++SS KEKLR
Sbjct: 241 LEKVMDAAKKSSSKEKLR 250

[Close]

BLAST of Tan0003338 vs. TAIR 10
Match: AT4G21140.1 (BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G05400.2); Has 41 Blast hits to 41 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 272.3 bits (695), Expect = 3.8e-73
Identity = 149/251 (59.36%), Postives = 191/251 (76.10%), Query Frame = 0


Query: 1   MIRFTKLKSLALTADSGSHQLLQRCWVSGTAKGKSKIKAGQQLKRSKITIKKGGAASSKG 60
           MIRF + K +    DS S+ LLQ+C+ SGT KGKSK+K GQ LKR+K+TIKKGG     G
Sbjct: 1   MIRFARPKPI---IDSVSYNLLQKCYASGTPKGKSKLKTGQSLKRNKLTIKKGG-----G 60

Query: 61  GGGGGGGRRIPPEQEKLYDQCLNAPTPLRFLKPRDREREGEREKLGLISKERQREIEMMK 120
            GGG GG  +   + ++ DQC+NAP P+R+L+P++RERE  REKLGLISK RQ+EI+  K
Sbjct: 61  NGGGRGGDEVDKGKGRISDQCINAPCPVRYLRPKEREREARREKLGLISKARQKEIDFQK 120

Query: 121 MDKS-KLGISDSPSIIGTMGLDLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRRHR 180
              S  +G++ +P  IGT GLD ISLG+   D++PKY++TVEDG RLAKEYSRVLMR HR
Sbjct: 121 KGGSFTMGVTTAPMRIGTPGLDYISLGIFTEDELPKYKVTVEDGIRLAKEYSRVLMREHR 180

Query: 181 ARQAAESTLLQMKKDAIEALPEHLKAAALIPDLTPFPANRFMATLTPPIEGYIEKV-KEA 240
           AR+ AE +L++M+  A+EALPE+LK AAL+ DLTPFP +R  ATLTPPIEGY+E++   A
Sbjct: 181 ARRVAEISLMKMRNAAVEALPENLKKAALVRDLTPFPVSRGTATLTPPIEGYLERIMNAA 240

Query: 241 ARRSSGKEKLR 250
           AR+SSGKEKLR
Sbjct: 241 ARKSSGKEKLR 243

The following BLAST results are available for this feature:

BLAST of Tan0003338 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0003338 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022980123.1	1.7e-120	93.98	uncharacterized protein LOC111479606 [Cucurbita maxima]	[more]
XP_038906439.1	9.6e-119	91.97	uncharacterized protein LOC120092349 [Benincasa hispida]	[more]
XP_022924790.1	1.3e-118	92.77	uncharacterized protein LOC111432182 [Cucurbita moschata] >KAG6582653.1 hypothet...	[more]
XP_023527048.1	2.1e-118	92.37	uncharacterized protein LOC111790399 [Cucurbita pepo subsp. pepo]	[more]
XP_022147522.1	9.0e-117	90.76	uncharacterized protein LOC111016425 [Momordica charantia]	[more]

BLAST of Tan0003338 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IYC8	8.5e-121	93.98	uncharacterized protein LOC111479606 OS=Cucurbita maxima OX=3661 GN=LOC111479606...	[more]
A0A6J1EG20	6.1e-119	92.77	uncharacterized protein LOC111432182 OS=Cucurbita moschata OX=3662 GN=LOC1114321...	[more]
A0A6J1D2K4	4.3e-117	90.76	uncharacterized protein LOC111016425 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A5D3D1D4	1.0e-110	85.94	Copper ion binding isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
E5GCH1	1.0e-110	85.94	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of Tan0003338 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G05400.1	4.8e-76	60.85	copper ion binding	[more]
AT4G05400.2	4.8e-76	60.85	copper ion binding	[more]
AT4G21140.1	3.8e-73	59.36	BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G05400.2...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..72
IPR039145	39S ribosomal protein L40, mitochondrial	PANTHER	PTHR13359	39S RIBOSOMAL PROTEIN L40, MITOCHONDRIAL	coord: 1..249

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0003338.1	Tan0003338.1	mRNA
Tan0003338.2	Tan0003338.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005762	mitochondrial large ribosomal subunit