Tan0003322 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAAGAGCAAACCAATGGAGAGACACGCAGTATAGCAGAAGAGATCGGCAGCGACAAGAAGAAGAAGAAGATTGCTCTGCTAAGATGCCATTAATGGACACAACAGCAACCACTCTCAGAACTTTACACCCATTTTCGTCCTTTCAACTACGCTCGTCGAGGGTTCATCGTCTTCTTCGCCCACACTGCTTCTCCTCCCATTTCAGCCACAGACACCACCATCCGTGTTCTTCCTCCTCTCACCGGCTCCTCCCCTTCTGCTCCTCATGTAAGTTTATATCTGTAATTGAATGTTCTTACATCCTCTTGAATCTGTAATTTCTGCTGTGAATTGGGTTGAATTGCTTTTTCGAGTTTGATTTGGATTTCCTAATGGCGCAGCTGAAAGAGGAGAGGATTCTGGTTCCCTGCCGCGCGGTGTTGGTGAGGCCGTCATTGTCAATGGGGTTTCCCAGCCGAAGCTTCTTCAAGTTGTGTTGGTTTCTCCCCTGGTAATTATGAAGCATATAACGAGCGCCCTTGTACATAATACTTGAAATTGCTTAGCTGATTCTTGAACTCTTCTTTTCTGCCTTCTTCTTTCAAGTCATCGCTATCTTTAGTTAATTTTTATGTTCCCATTTGACATTTGTATTTGGGGGGTTGTTTGGTTTGGCTTGATTGAACACTTTGAAGAAGTTTCACATCGCTTTAAGCTTTGTTTGATTGTCAAGGGCGAAATTTCACATGCTAGGACATTTTTTTATCAAATATGAAGTGGCTGTATATTTGAGAACTTTGAAGGGCTGTAACTTGCAGTCAATGGAGTAGGTTAGCTTCGAACCTTGGGGTGAGCTTAATAGGGAAAATCTTTGATATCTTCTAGTTCCAGGCTATTCGGTGAATGCAGGTGCCCGAATACTGGGGATAGAGCCATCATAACAATATAGGGTGCCTTTTCCTAAATTCTGAATGTTTTTTGAATCACTGTTCTACTTAAAACTTCTCGTTGAGACAAACAAAAGAAATACAGAGGGTTCTAGCATAGGGAAATTTGCTGACATTCCAATTGATGTTTTGTTTGAAAGCAAATCAATAGGGAACTTATTTCATATTTGCATCAATTTTTGTGATAAGCTAGAGATCTTAGGTGGGTTTTTTTTTTTATATGCTGGACAAGTGGGAATTAGTAGAGCTTCTGGCAATTGACATTGACAAATCCTGCTTGGCAACAGTCTTCTTCAAGTTGAGAAGTGAGTTTCGAGGAAACAGTTGTAGAAATAACAATGGATTGCTCGAAAACTTGTCGGACATATTCTTGTTGTTGATGTCATATCAGAGCTAAAGATCTTGTGATATTAGTCTTAACTTTTATTTTGGTTTACATCAAATGCTTCTTGTATATTTCTTCCAAATTGAACTCTTCATCTAACAAAATACACATTTCTCACTGTGTACACTGTACGCAAACAGTACAGCTTATTAGTTTTCATATCATGGCACGGACATATGCAGTTGTGTGATACTCGGTGAACTCTGAATCGTAATTTCTCCATTTTTCCTTTTTGGGTTGCAGACAACCTCAATTCCTCAAGGCTGGCTCTGAGATTTCTGTTGTCCTTGACAGATTCCTGGGAACACTGGTAGCATTGCCAGAACATGTGCTGCATCAGCTGTTGGACTACATCTAGTTGGGGTTCGTATCGAAACATCACTACTTCGAGTGCAATCGTTCTGATTTCCCCCTCTAAATTGTAGCTGAAGACCCCCCAAAACTCATGTATTGAGCTGCTGCTAACTTTATTAACTTAATCACTCATATCATTTTGCTCTCGTTTTCTGCTTCAGCCATTGGGATTTAAGGTGGATGACACGAAGTTAAAGCGTGCTGGTTTGGATTACTGGCCGTATCCCATGATGCATTTTGAATATGATCCTTTTTCTATCATTTACAGTTAAATAATAGGGATTCGAGTTCTTTGAATACTAGGAAATTGTGCTTTACGTTTTAGCTTTCCTCCCTAAATTCTATTTCCATTTTGAACTGAGATTTGTTAAACCGATCTGCCACTTTACATAGAGTTCAATGTTTTCAAGTTTTAACATCATGTTTTAGATATGTCGTCGTTAAAATTCATAACAGGTGGGCAGACTTCCGAGACTACTTCAAAAAACAGGTGATCTTCGCTCACAATCGTACATGGATCAGTGAAAATGTGCTCAAAACTCTATTTGTTTGGTGATTCTATGAGTTTCTTCCTTTTTGCATACTGCACCATTGATATATGTCTTCCAATCCAATTGATATGTACAGGAAGGAGAAAAGCGGCTGCTAGCATTTACAAAGAGAGGAACTACACTTCACTCGGCAAGTGCACATATCTTTGATGCCTTTCCTTATATAATTCTTCCGAAAACATCGATCGCTCGTGGGCTAGGAGGGATTTTGAGTAACGAGGATTGTTTTCTCTTTTCATTTTTGCAGGATTTTTCATATAGGCGGGGCGATTACTTGTTGTTCGGATCGGAAACTAGTGGCTTACCATCTGAAGCTCTTGAAGATTGCAAAAACCAGGCATTTGGTGGAGGGACCATAAGAATTCCAATGGTTGAAACTTATGTTAGATGCCTCAATCTTTCTGTAAGTGTTGGCATTGCTATATATGAAGCTTCAAGACAATTAAATTACGAGCAACTTCAGTTTGCACCAGAGGGTTGTACCAGCGATGAACAATCTATCATTACAGAGGATCTTTTTGCTTGATTTTTTATATGAAATTTTGTGACATTTACATTGATTTGAGGACAG TGAAGAGCAAACCAATGGAGAGACACGCAGTATAGCAGAAGAGATCGGCAGCGACAAGAAGAAGAAGAAGATTGCTCTGCTAAGATGCCATTAATGGACACAACAGCAACCACTCTCAGAACTTTACACCCATTTTCGTCCTTTCAACTACGCTCGTCGAGGGTTCATCGTCTTCTTCGCCCACACTGCTTCTCCTCCCATTTCAGCCACAGACACCACCATCCGTGTTCTTCCTCCTCTCACCGGCTCCTCCCCTTCTGCTCCTCATCTGAAAGAGGAGAGGATTCTGGTTCCCTGCCGCGCGGTGTTGGTGAGGCCGTCATTGTCAATGGGGTTTCCCAGCCGAAGCTTCTTCAAGTTGTGTTGGTTTCTCCCCTGATTCCTGGGAACACTGGTAGCATTGCCAGAACATGTGCTGCATCAGCTGTTGGACTACATCTAGTTGGGCCATTGGGATTTAAGGTGGATGACACGAAGTTAAAGCGTGCTGGTTTGGATTACTGGCCATATGTCGTCGTTAAAATTCATAACAGGTGGGCAGACTTCCGAGACTACTTCAAAAAACAGGAAGGAGAAAAGCGGCTGCTAGCATTTACAAAGAGAGGAACTACACTTCACTCGGATTTTTCATATAGGCGGGGCGATTACTTGTTGTTCGGATCGGAAACTAGTGGCTTACCATCTGAAGCTCTTGAAGATTGCAAAAACCAGGCATTTGGTGGAGGGACCATAAGAATTCCAATGGTTGAAACTTATGTTAGATGCCTCAATCTTTCTGTAAGTGTTGGCATTGCTATATATGAAGCTTCAAGACAATTAAATTACGAGCAACTTCAGTTTGCACCAGAGGGTTGTACCAGCGATGAACAATCTATCATTACAGAGGATCTTTTTGCTTGATTTTTTATATGAAATTTTGTGACATTTACATTGATTTGAGGACAG ATGCCATTAATGGACACAACAGCAACCACTCTCAGAACTTTACACCCATTTTCGTCCTTTCAACTACGCTCGTCGAGGGTTCATCGTCTTCTTCGCCCACACTGCTTCTCCTCCCATTTCAGCCACAGACACCACCATCCGTGTTCTTCCTCCTCTCACCGGCTCCTCCCCTTCTGCTCCTCATCTGAAAGAGGAGAGGATTCTGGTTCCCTGCCGCGCGGTGTTGGTGAGGCCGTCATTGTCAATGGGGTTTCCCAGCCGAAGCTTCTTCAAGTTGTGTTGGTTTCTCCCCTGATTCCTGGGAACACTGGTAGCATTGCCAGAACATGTGCTGCATCAGCTGTTGGACTACATCTAGTTGGGCCATTGGGATTTAAGGTGGATGACACGAAGTTAAAGCGTGCTGGTTTGGATTACTGGCCATATGTCGTCGTTAAAATTCATAACAGGTGGGCAGACTTCCGAGACTACTTCAAAAAACAGGAAGGAGAAAAGCGGCTGCTAGCATTTACAAAGAGAGGAACTACACTTCACTCGGATTTTTCATATAGGCGGGGCGATTACTTGTTGTTCGGATCGGAAACTAGTGGCTTACCATCTGAAGCTCTTGAAGATTGCAAAAACCAGGCATTTGGTGGAGGGACCATAAGAATTCCAATGGTTGAAACTTATGTTAGATGCCTCAATCTTTCTGTAAGTGTTGGCATTGCTATATATGAAGCTTCAAGACAATTAAATTACGAGCAACTTCAGTTTGCACCAGAGGGTTGTACCAGCGATGAACAATCTATCATTACAGAGGATCTTTTTGCTTGA MPLMDTTATTLRTLHPFSSFQLRSSRVHRLLRPHCFSSHFSHRHHHPCSSSSHRLLPFCSSSERGEDSGSLPRGVGEAVIVNGVSQPKLLQVVLVSPLIPGNTGSIARTCAASAVGLHLVGPLGFKVDDTKLKRAGLDYWPYVVVKIHNRWADFRDYFKKQEGEKRLLAFTKRGTTLHSDFSYRRGDYLLFGSETSGLPSEALEDCKNQAFGGGTIRIPMVETYVRCLNLSVSVGIAIYEASRQLNYEQLQFAPEGCTSDEQSIITEDLFA Homology
BLAST of Tan0003322 vs. ExPASy Swiss-Prot
Match: P74516 (Putative tRNA (cytidine(34)-2'-O)-methyltransferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr0992 PE=3 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 2.4e-33 Identity = 77/157 (49.04%), Postives = 104/157 (66.24%), Query Frame = 0
BLAST of Tan0003322 vs. ExPASy Swiss-Prot
Match: C7BSD3 (tRNA (cytidine(34)-2'-O)-methyltransferase OS=Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77) OX=553480 GN=trmL PE=3 SV=2) HSP 1 Score: 131.3 bits (329), Expect = 1.6e-29 Identity = 74/163 (45.40%), Postives = 98/163 (60.12%), Query Frame = 0
BLAST of Tan0003322 vs. ExPASy Swiss-Prot
Match: O31590 (Putative tRNA (cytidine(34)-2'-O)-methyltransferase OS=Bacillus subtilis (strain 168) OX=224308 GN=cspR PE=3 SV=2) HSP 1 Score: 130.6 bits (327), Expect = 2.7e-29 Identity = 74/165 (44.85%), Postives = 98/165 (59.39%), Query Frame = 0
BLAST of Tan0003322 vs. ExPASy Swiss-Prot
Match: P0AGJ8 (tRNA (cytidine(34)-2'-O)-methyltransferase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=trmL PE=3 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 4.7e-29 Identity = 73/159 (45.91%), Postives = 97/159 (61.01%), Query Frame = 0
BLAST of Tan0003322 vs. ExPASy Swiss-Prot
Match: P0AGJ7 (tRNA (cytidine(34)-2'-O)-methyltransferase OS=Escherichia coli (strain K12) OX=83333 GN=trmL PE=1 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 4.7e-29 Identity = 73/159 (45.91%), Postives = 97/159 (61.01%), Query Frame = 0
BLAST of Tan0003322 vs. NCBI nr
Match: XP_023004870.1 (uncharacterized protein LOC111498049 [Cucurbita maxima]) HSP 1 Score: 470.7 bits (1210), Expect = 8.5e-129 Identity = 241/273 (88.28%), Postives = 253/273 (92.67%), Query Frame = 0
BLAST of Tan0003322 vs. NCBI nr
Match: XP_022959577.1 (uncharacterized protein LOC111460609 [Cucurbita moschata]) HSP 1 Score: 468.8 bits (1205), Expect = 3.2e-128 Identity = 239/273 (87.55%), Postives = 253/273 (92.67%), Query Frame = 0
BLAST of Tan0003322 vs. NCBI nr
Match: KAG6593315.1 (hypothetical protein SDJN03_12791, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 464.9 bits (1195), Expect = 4.7e-127 Identity = 237/270 (87.78%), Postives = 250/270 (92.59%), Query Frame = 0
BLAST of Tan0003322 vs. NCBI nr
Match: XP_023514221.1 (uncharacterized protein LOC111778552 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 462.6 bits (1189), Expect = 2.3e-126 Identity = 239/274 (87.23%), Postives = 253/274 (92.34%), Query Frame = 0
BLAST of Tan0003322 vs. NCBI nr
Match: KAA0058644.1 (putative tRNA (cytidine(34)-2'-O)-methyltransferase [Cucumis melo var. makuwa] >TYK10451.1 putative tRNA (cytidine(34)-2'-O)-methyltransferase [Cucumis melo var. makuwa]) HSP 1 Score: 458.4 bits (1178), Expect = 4.4e-125 Identity = 232/271 (85.61%), Postives = 247/271 (91.14%), Query Frame = 0
BLAST of Tan0003322 vs. ExPASy TrEMBL
Match: A0A6J1KVT5 (uncharacterized protein LOC111498049 OS=Cucurbita maxima OX=3661 GN=LOC111498049 PE=3 SV=1) HSP 1 Score: 470.7 bits (1210), Expect = 4.1e-129 Identity = 241/273 (88.28%), Postives = 253/273 (92.67%), Query Frame = 0
BLAST of Tan0003322 vs. ExPASy TrEMBL
Match: A0A6J1H4X6 (uncharacterized protein LOC111460609 OS=Cucurbita moschata OX=3662 GN=LOC111460609 PE=3 SV=1) HSP 1 Score: 468.8 bits (1205), Expect = 1.6e-128 Identity = 239/273 (87.55%), Postives = 253/273 (92.67%), Query Frame = 0
BLAST of Tan0003322 vs. ExPASy TrEMBL
Match: A0A5D3CFA4 (Putative tRNA (Cytidine(34)-2'-O)-methyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001000 PE=3 SV=1) HSP 1 Score: 458.4 bits (1178), Expect = 2.1e-125 Identity = 232/271 (85.61%), Postives = 247/271 (91.14%), Query Frame = 0
BLAST of Tan0003322 vs. ExPASy TrEMBL
Match: A0A1S3CFJ1 (putative tRNA (Cytidine(34)-2'-O)-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103499907 PE=3 SV=1) HSP 1 Score: 458.4 bits (1178), Expect = 2.1e-125 Identity = 232/271 (85.61%), Postives = 247/271 (91.14%), Query Frame = 0
BLAST of Tan0003322 vs. ExPASy TrEMBL
Match: A0A0A0K6L9 (SpoU_methylase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G428850 PE=3 SV=1) HSP 1 Score: 443.0 bits (1138), Expect = 9.2e-121 Identity = 227/271 (83.76%), Postives = 243/271 (89.67%), Query Frame = 0
BLAST of Tan0003322 vs. TAIR 10
Match: AT5G26880.2 (AGAMOUS-like 26 ) HSP 1 Score: 318.5 bits (815), Expect = 5.0e-87 Identity = 149/201 (74.13%), Postives = 177/201 (88.06%), Query Frame = 0
BLAST of Tan0003322 vs. TAIR 10
Match: AT5G26880.1 (AGAMOUS-like 26 ) HSP 1 Score: 260.8 bits (665), Expect = 1.2e-69 Identity = 122/162 (75.31%), Postives = 142/162 (87.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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