Tan0003248 (gene) Snake gourd v1

Overview


Name	Tan0003248
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RNA helicase
Location	LG10: 6792199 .. 6804959 (-)
RNA-Seq Expression	Tan0003248
Synteny	Tan0003248

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCCATGCATTTCTACCGCAAGCTCTTCTCTCCGGCGACTTATTCTGCTCTTCCCGGTTTGATTCTCAGTGCCTGTTTCGGTTGTTTACCATGTTTGTTGTGTTATTTGTCTGCATTTACTTCAAGTATCTAGTCCTTTCTGTTATGATTTTTTTATTTTTTATTTTTAAATAGTTTTTTAGGTGATTGAAGATTCAATAGTTCGGCTCAATTAGTGATGGATTTTATTATGGGTGTCATTCTAAGAGAAGGGCTATGAAAAGGCATTTTGTTTATGGCGTTTTTGTGTTTAATTTCTTAATGTTTGAAGAATTCTTCTGCTTCTATATTAGGCTAGGGAAGTTGTTTTGGATAATGTTACCTTCGCGGTTCTTCTATTAAAAAAGGTATTTTCTTCTTATTTGTAATGGTTCTTGGGAAGATGTGTTAAAATGCTACAGTGATGGAAAATTATCTTTACTGGATTCTGTGGTAATGACTTTGTTGGCTACCAAACCGGACATTGCAATGTGACCCCTTCTATATTTATTAGAAGGAACTCGGGAAAAGAAAAGTTTCCATAGTAGTATTGGCATTTAGTAGGTTGTTAAATAAGTTATAATATACGTGATAATTGTATTATGATTGGTTGATAATGCTATGGCTTTTTTTTTGTCCACTTTGCTCTTCTTGCACCCAACAAAGTAATCTATTTTGTTGAGGCAGGGATTTGTTTTTGTAAGAAACTAAAAGTAAACTCATGCTTCGCGGGAAAGCAAGTGATTCCATGCATGTTTATTGAACTGATATAGAGGTTGTAACACCGGACCATTCAGCATGTAAAATAAAACATTCCAGTACTATAACAAGACAAATTTCATGCCCTTTTTGTGTTGCGTAAAGCATTTCTATTTTCTACTTTTGTAGGTTTTGTGGGGGCACTAAACCGGGATTTCCATTTGAATTTTGGACCTTCTTGTTGTAGGCGGTACAGTATCTACAGCAGTACCCATAAATTTGACTTCACAGACTTGACGTAAGACTATTGGGCTTAAAGCTGCATGAAGTTTCTAATTCAAGCGCTTGACTTCTGTATACATTATAGTTTTTTTTTTGCACCGCATCCTTAACTGTTAAAGTATCTTAATTATGTACTCCATGGTTAGTTTTTATTGAGTCTATTCAGAAGATTTTAGAAGTTTGATACCCCTACCAGAAGAGAAAATATTTAGTGTGACTGCCTCAATATGGTTGCTACCTCCATTTGATATATATCACTTTGTTTATTTAATAGTCACCGTACAATTGATATAGAGAGATACCTTTTTAGACAGAATCAATTGGTCATAGGTGTCTAGTTTTTCGTATTGTTTGTGTGTGCTGGAGTTCTCAATGCTCTTATCTTTATATGACCAATGCTTTTACTGCTGCACACCCTTCTATATCTCTTGTAAAGCATTTGCAAGATCTAAGTTCATTCATCTGTTTCTAAGATCTAAGTTCTTTTACTCGTAGACGTCCCCATTCATGGTATCCAAATGCACGAAGTAAACGTCGCAAAATTTTTCTGCACATGGGTCCAACAAATAGTGGCAAAACTCACAATGCTTTGAAGAGGCTTGAATCAAGTGATTCTGGTACATGGCAATCAATATCATGAAGTTACTTTTGTAGTTTATTTAATGTTCTCTCGATTCAATATTATCATGGAGAGACTAAATCATGGTCATGGATATATTCTGAATCCATACTTTCGTCTTCTTATGCAGGCATATATTGTGGTCCCCTGAGATTGTTGGCCTGGGAAGTGGCAAAGCGGTTGAATAAGGCTAAAATTCCCTGTGATCTAGTCACTGGACAAGAAAGAGAGGAAGTTGATGGTGCGAAACATAAGGCTGTGACTGTTGAGATGGCTGATGTAACCTCCAACTACAGTTGTGCTGTCATCGACGAAATTCAGGCATGTTATCTAGAGTTCATTTGGTGTAGCCTAAGAGGATAAAAGAAGAATTCTCTCTAAGAATAAATAAAATCTTTATTATGAATAAAAAGTTATTGAATACAAGAGGGAAATTCTCTATTTATAGAGAAATGGAAAACAAACTAATCCTAATTTTAATTAACCAAGGAATAACCCAAACAAACTAATTCTAATCTTAATTAACCAAGGAATTAAACAAACTAATTCTAATCCTAATTAACCAAGGAATTAAACAAACTAATCCTAATACTAATTAACCAAGAAATTGACCAAGATATCTAATTAGTCATTAATTCTACTACATCATATTCTATCATTCTCAAAAGAAACCCGCCCTTCAGTTTAAAAGAGAATGAAGTAATCAAGTTGCTTCTTTCGTTAGTTGGAAAAATTACCACTGAAAATCTTTGCCTTTTTGCCATTTTTGGAGGACGACTCTAAATAAAATCAACAATCCCAGAAAAAAACCGTTCTCTATAAGTTGGATCGAAAAAACCCTCCGTGAAAATCTCTCTATCTTTCCTTAAAAATATTAAAAACCGAACTTTCATCGAGATAAAAATGAAAGAATACACGGGCATACAAAAAAAGCCCACAAAAAGGAAACCAACTATAAAAAGGGGCTCCAATCATGCAAGATAAGACTTAGAGAATAATTATAATCAAGCAAGATAAGACTCTGTGCAAATCTTGAGAATATTCAAATTATGTTGTATCAGAGTGTTGTACTTGTCCCTTGTGGAGCCAAGTTTGGATTCCTCTCCAAAGTACAATGAAAAACCCTCGTTGCAAGTATGGAATAAATTCAACATGGGTCGGATTGTACTTGCTTGAGTTGGTTCGGGTATGGGTTGGGTTGAAATTGGTAAGGAAATAGAATGGAGTTTTTGGGTCGGATCACACTGATTTTGATTGCGTCTTCTTCCTCTTCTCTTTGCACACGACAACACTTTGCACCCGATTGTGGCTTCCATCTCCTCTGCTTGCATCATCTACTTCGTTTGTGTCATCTTCTTTAACGATGTTTGTGCTCAAAGTTTCGAAGGATGTCGAGTCGGGATGTGCTGGTAAAGGGTTGGTCACTTCTTCCTCTTCGCTTTCACTTGCTTGTTCTTTGCACTCAGACATAACTCGTGATTCTTTGAAGTGTTCTTGAGCAATTTCACGGCCTCTTGCAATTTCCATGTGGTTTGTTTCTTCTTCGCATGGGAAATTCACATTGCCTTGATTCTGAATGGTTTCTTGATCTTTATTTATTTCTGCAAGCTCTTGGTTTTTGGCAAATTCTCGGATTTTTTTTACTGCTACTTTCAAAATCTACAATTCTAGCCCTTTTGCGTTCTTGTTGTTTGGCTGTAAAATGATTCAAAGTGTGTTAAGACATATTATCCGAAAGTCGTTGGACTTCAACCACTCCTTTCTTGAATTCCTCTAAGACTTCACGATCGATGTAGGAATTTATGTTTGTTCTTGAATAATTCTTTGCCTCCATTGGTTGTGATCAAAATCTGAAAGTTGACTTTTTGGGCTCTGAACTCCCTTCTTGTGTTGTAAAATTCTATTCTTCAAGCTTCTTTCTTATTTCTTGAAAAAAGAATACACTAGAGGTACCCTCTTGTATATAAATGTGGGCTATTGAAAAACGAGAACAACTCACGAAGCTCCCTCTTGCGATCTACGTCAACAAGAGTTTCTCAGTTTTCCACCAACAACAACCAACGTTGGCCTAGACGATTGCTTTGATACAAAATTGGTGTAGCCTAATAGGATAAAAGAAGAATTCTCTTCTAGAATCAATCAAATCTTTATTGTGAATCAAAGTTATTGAATACAAGAGGACAATTCTCTATTTATAGAGACTTGGAAAACAAACGAATCCTTTTTCTAATTAACCACGGAATTACAAAACAAACTAATTCTAATCTTAATTAACCAAGGAATTAAACAAACGAATCCTAATTAACCCAGGAATTGACCAAGATATCTAATTAATCACTAATCCTAGAATTGACCAAGATATCTAATTAATCACTAATCCTAGATTTCTACTGCATCATCATTCCTAAGAATTTGCGTCACCCATTGAGACTCTGATGATACCTCAACTCAATTAAGAAAGTTCTGTCCATTAGTAATTGCTATTTTGGCTGATGGTTTCTCTTTCTGGCTCACAACAGTATATGGTCCACCTGGGAATGGTTTTCATGCTGATTTCTAGAATGAAAATGAATTGGATGACTTGGCTGGATTGGGTGGAGATAATTGGATTATTGGCGGTGATTTCAATGTCACTAGATGGACAGTTGAAAAGTCACATGACAATTCCATCACTAGGAGTATGAACACTTTCAATCAGTGGATTTCAAATTATGATTTGCTTGATATTCCGCTACAGAATGGTCGTTTCACTTGGTCAAATACCCATTATTGCTCTCTGTTGGACAGATTCCTAATTACTGTAGGTTGCTCCAACAAGTTTGGCTCAGTTGCCCTCAATCGTTTGCCTAGAATTACATCGGATCATTACCCGCTAGCTCTAATTTTTGGCAATGTTGTTTGGGGACCCGCTCCTTTCTGTTTTGAGAACTCATGGCTTCAGATTGATTCAATTAAAGACGTGGTATCATCTTGGTGGAATCGAATCACTTTGAAGGTCGCGGGACATGCCTTGATGCAAAAATTAATAGGGCTCAGACGAGTCTTATTAGAGTGGAGTAAAGGTAATCGTTTTGTTGCTTCAAATTTCCAATCCCTTGTCACACAATTGCAGACTCTGGACAATTTGGAGGATAGTGGGCCCTTAACCACCCCCCAGATTCAAAACCGACAGCTTCTACGAGATCAAATTGAATCCTTGATTGCACAGGACCGGGTTTATTAGCACCAGAGATGCAAGCTAAAATGGCTCAAGGAAGGTGATGAAAATACTAGTTTCTTTCATCGAATATTGGCTGCAAGGAAGAGAAAAAGTTCGATTTCTGAAATCTTGTCAAGAGAAGGTGTTAGTCTTACTTCTGCAGTGGATATTGAAAAGGAGTTCATTGATTATTACTCAAAATTGTATACAAAAGATGGTAACTCTCGATTTCTGCCCACTAATGTTGATTGAAGTGCTATCTCAACAGAGGAAGCAACGACTCTTGAAGTTGCCTTTACAGAAGAGGAAGTTTATCACGCTGTTTCTTCTCTGGGCTCCAATAAATCGCCAGGTCCTGATGGATTTACAGCGGAGTTCTTCAAATTCTTTTGGGATATTCTTAAACTTGACATTATGAACCTGGTTCAAGAATTTCATTCTTCTGGCACCATCAACGTTTCATTGAATGAAACTTATATTTGCTTAATACCAAAGAAGCTGGGATCAAAATCAGTGACTGAATTCCGCCCTATAAGCCTGATCTCCTGCCTTATAAAATAATTGCGCGTGTCTTATCAAATCGGTTGAAATTTGTTTTGTCATCAACTATATCGAAAAACCAATTTGCTTTGCTTTCGTGGCTAACCGACAGATTATTGATGCGTCTTTATTGGCAAATGAACTAATTGATGACTGGAATATCCGTAACATCAAAGGAGTAGTTATAAAACTTGATCTTGAAAAGGCGTTTGATACCGTTGATTGGGACTTTGTGGATGCCGTGCTGGAGGTTAAAGGTTTTGGGGCAACCTGGAGGAAATGGATTCGGGGTTGTATTACGAGTGCAAATTATTCTATCATTATTAATGGGCGCCCTCGTGGGAAGATTATCCCATCTCGTGGTATCCGATGCATGCAATTTCCCCAACCCCATTTCTCTTCATTTTGGTGTCTAATTGTTTGAGCCAATCTTCGGACTATGGTGGTAAGTTGGGTAGCATATCCTCTCACCAGCGTATTGGTAACTCATCTTTTGCCTTAACTCATTTGCAATTTGCGGATGATACACTTCTTTTTCAACTTCCGATCATTCCGCCTTTGCAACGCCTCTCTATGAACTAATCAAGATTTTTAGAGTGCTTCCGCTTAAGGATTAATCGGCCAAGAGTGAGATGATTGGTATACATATTAATCAATCGTAGAGATGGACAGACTCATCAAGCGATCTTCTACCGCAAAAGGGGTTTTGGCCAAACAACTATTTGGGCTTGCCATTGGGAGGTAATTCTCGTTCGATTTGTTTTTGGCAACCTATTATAGAGCGGTTGAAGCTAAAACTCCATAATTGGAAATACGCCTTCATTTCTAAAGGTGGTAGGCATACTCTTATCCAGGCCACACTCTCTAGTATGCCTACTTATTATATGTCTCTTTTCAAACTCCCTTCGAAAATCATTTCATTGCTGAATAAAATTATACGCGACTTCTTTTGGGAAGGAGCTAAGGGTGATGGTGGAGTACATAATGTGAAATGGGCAACTGTTCAACTTCCCAAGCTCATGGGTGGTCTTGGGATTGGTAACTTCGCACATCGAAACTCGGCTTTGCTGGCTAAGTGGGTTTGGAGATTCATGCATGAACCTGATTCCTTGTGGCGGAAATTTATAGTGGCTAAATATTACGGTTCCTTGAATTCTGTCGACTGGCCCCCGATCATTACGAATACTAAACACAAATCGCCTTGGAGATCTATCTGCCTTTTACGTGATTTGGTGATTCGACGTTCTAAGCGTTGCATTGGGAATGAATATTCCACAGCCTTTTGGAAGGATCATTGGCTTAGTTGTGGACCTATTGGTCAGACATTTCCACGACTCTTTAGATTGGCTTTGAACTCTGATTTGTTGGTGGCAGATATGTGGAATGTGATTGAGTTGGCCTGGGACCTGCGTCTTCGGCGTAATTTAACAGACTTAGAAATTGATGAGTGGACATCTCTTTCTCATTTATTATCGAATGTTCGTTTGTCGAATAGGCTGGACTCATGGAAATGGTTATTAGAGCCTTCTGATTTTTTCTCTGTGAGATCTCTCACTGCTGATTTGTTGGATTGTGATGATATGGGGTGAAAGGATACCTATTCAGCCATTTGGAAGGACTCATACCCAAAAGATTAAAATCCTTATCTGGGAACTCAGTTTAGAAGCCATTAATACTGCTGATCGTCTTCAAAAACGAATGCCCTACATGTCCTTATCCCCCTCTTGGTGTCTTATGTGCCAAAAGAACTCTGAATATGCGGGTCATCTGTTCGTGCATTGCCCCTTTTCTTTAAATTTTTGGTGGAGGATTCTGAATGCTTTTGGTTGGTCAGCAACGCTTCCTATTAATACCTTTGATTTCTTATCCTCCGTTCTGGTGGGACATCATTTCAAGGGTATTAGGAAAATTATTTGGTTGGCTTTAGTTCGAGTCTTCATTTGGAACCTATGGATTGAGAGGAATAGCCGTCTGTTCAGGGATGTTCCTTCTACTTTTGATCGCTTTATGGATAATATACTTTTGAATGTTTATCTTTGGTGTAAGGATGTTTATCCCATTACCTTGTTTAACTCTCATTTTTTCATTTACAATTGGCAATCTTTCTTGTAATACACCTTCTGGTGTTGGGAGTTTTCCTCCATTTCATTCATCAATGAAATTGTTTCTTATATTAAAAAAAAATAGTAATTGAAGCATGTATAGCTGGGGCAGTTGGAATGGTACTTTGCATTAGTAAAACTGGAAAAAAAATTACCATGCTCTGATAACATTAGGTTTTATTTTCTGGAGCTGCACTATGATTCAAGCACAAAATAAATAATTTCTTTGTTTGCACCTAAAAGAAGACAAAGGGAATGCTTGTAAATATATACGTTTATATTTGAATTAAGCTAAATTCACGTATTCAAGCATTAAAAGTGTTCTATGGTAACAAGATTGATCATTTAATTTCTTGTGGAAAGCGGTTGAGGACAATTGGGGCTCTAACTTGTAAACTCTTGGTTGAAATAAAATGTTGAAGTGTTAAACTTGGTTTATTTGTTATCGGTTTTTTACTTCAGATGTTGGGATGTAAGACAAGAGGTTATTCATTTACTCGTGCACTACTTGGAATTTGTGCTGATGAGCTTCATCTCTGTGGAGATGCGGCTGTTGTACCCCTTATTCAGGAAATTCTTAAAGTAACTGGTGATGACATTGAGGTAATAAAACTATTCATGTTATACGTCATTCTAGCCTATTATGGGAAAAATTATAGGTGTTGTTCTGCAGTGTTTACTATATCATGCAACAAAGTTGACGGTTACATCTATCAAACTATTGTATGATTTTGAAAGATATTTGCTATTATTGATATCTGGCTATTGTCACTCCATCTATTTCAATAATTCAAGACTTCAAGTTGATAATTATCTTTTACATAATATTTATATTTTTGTTTTGTAAAGCTTTGTAGTTCCTTCTTGTGCTTTAGGTGCAATACAATGAGAGACTTTCACCTCTGATTCCAATGAAAGTTCCACTTGGATCCTATTCTAATATTAGGACGGGTGATTGCATTGTTACCTTTTCACGTCCTAAAATATATGGTTATAAGGTCAGTCTCTTTATTATCTTACCTAATGCTTATTCTTTGCACAGCCTTGAAAACTTCATTAGATAATTACTTATCCAAAATTTTTACTGGCTTAGTTTTGACGCTTCAATTATCTCCATCTCTCCCTCCTTTTATTGCTACTGCTTGTTGGCTTCAACAATTTTTGCTATAACTTCTTAGCATGTCGCCTCCAACTTAAATTTTTTATGTAATATTTAAACTCTAATTGTTTTTGTTCTCTTTCTTTTCTAGAGAAAAATTGAGGGCGAAGGTAGACATCTATGCTCCGTAGTTTATGGTTCACTACCACCAGAAACTCGAACGAGGCAGGTATTAGCATCTGCCTGATTCTGATAAAACTTTAACATGCCTTGGTAATTGTAAATTACCAATCAACCCAAAAGCTTAAACTTATAGGTTATGGTAAATTTAATTATATCAACACCGACACTCCCCTAACTTGTGGGCTTAGAAATTTGAACAAAAGTCCAACAAGTGGAAATCAAACACTCCTCTTCACTTGTGGGCTTGGAAATTCGAACAAAAGCCAACAGTAAATTTAATTATATCGACACCAACAGTAATAACTTTGTTTTCTGATTTAATACTTGAACTCCATTATTGATATTCTTAAATTTTCGACCAACTTCCTTTTGTCTGTTGCATGCTTTCTTTCTTATAAGTTTTCACCTATTAACTACTTTGCTCCATGTTCAAACATTAGCGGTTAATTATATCGGCAACCCTGAATTTGCTGAGTTGAGATGCTTTTTAGAACTGCAGGCCACGATGTTTAATGATACAACCAGTGAGTTTGATGTGCTGGTGGCTAGCGATGCCATTGGGATGGGTCTTAATTTGAACATCTCGAGGATCATATTTTCAACGATGGAGAAATTTGATGGTTTTGAGATGCGGGAGCTTACTGTACCAGAGATCAAACAGATTGCAGGTAAATTAAACTGGCACTATTTTACGGTTTTTGAGGAAATATTCTTTAAAATTTGATCGAACCTTTGGGCGGCAAATGCTGGAATTCTGTAGGTTAGTGATTGTCTATGGAATATGGTATCAGACTGCCATCAAAATACAGTATAAATCAGTGGATCGTCAGATTCATGGCTATTTCAATTCTAAGCTACTCTGCGACTCTTCCGATCCGCATTTTTTGTAGAATATAAATCTTATGATGATTTCAGAAAACTGGAAGCTATGTCTGCTAAGGGCATGTAATTGAGTTTGAATACTTGTAACGCATTAATACCCACTAAGACACTTTTATTCCTCAACTTTACTTAAATTCAAACACTTTTTTTTGATAACCGGGAGTTGGAGCTTTGAATTCAAATCCATCAATCGATTCTCCTCACTGGTTATTAATGTATTTCTTTCACATTTGCTTGACCAAATTCTAAACTTATTCAAAGTTCTAATAAACCGTATTGTTTTTATTTTGAAGTAGTTAGCCAGTCTCTTTCCTTGACGAGCTCTTAATATCTCCCTATGCCTATCGCAGTTCGTCTCAATGATCTTCACTCTGTATGAATGCCATACACCGTATGGTCTTCATGTTTGCGAATGGAAGATGTAGCGCTATTGTATATGATCAGGATCTGAACAATTTTGGAGTCCTAAGGACAGGCCCATCTTTTGTTTGTTGGATGCATATATCATCTTGTTTGCTATTTGCTATCATAATACTTCAATCGAATTGTGCAATCATCAATAGTTTGCTTTCGACTGTTCCATAATTCCATATACATGCTGTATTATTCAGAAATGGGGTTCATTTCTTCGTTTTGTATGTAGGTAGAGCTGGCAGGTATGGATCCAAATTTCCCATTGGTGAAGTAACTTGTATAAATGGAGATGATTTACCCTTACTGCATTCATCGCTAAAGTCCGCTTCTCCCACTATAGAGGTGATCTTTTATATAGTAATAATAAGTGATCCAATCAATCAATTGGCTTGATGTAATTCTTTTAAATCATTAAAAAAAATATGGTTAACATTTTTTTATTGTATTTTGAAAACTCAATAATGCAGAGAGCTGGGCTATTTCCAACTTTTGAACTCATGTATTTATATTCCCGTCTACACCCAGAAAATGGCCTCCGGCAGATACTGGTAGGTAGCTGCTTGACCACCACCTATTAATTGTTGAATATTTATACTAATCATCTGTCTAGTGATTAATCGAGGGTATCTAATATTTGAGGTTCATAGATACCTATGTATCTCATGCATCCGTGAGATAAGAAACTTTATAGAGTGGTTCTGACGTGACATAGTTTGATCAACTTTCCCAAAGTTTTTAACGTAGTTTGGTTAGTATTTTGCAACATTTATATTAAATCTGTTGTTGCAAGTATTTGATTTGGTTTAGTTCCTTCCATCTCAATGCAGGGAATGTAGGAAAGTGTTGCAATTTAGTTCCTTTCACTTTCCTTTTTTTCAATAAAAAAAATGGATAGTGAAAGTTTCTCCCCTCATTCATTAAGATTTATGACTAACGTTGTTTCATAATTTAATAACTTATGCAGGAGCACTTTGTTGAGAATGCTAAATTATCTGAAAATTATTTCATTGCTGACTGTGAAGAAATGTTGGTATGTTTGTCTACTGGATGATGTCTTGTTGAAAGCAGGAGTTTTATTCAATTTTGTCAATTTTCCTCTCTTGGTAACGCTTTAATATTTTTCATGTTGTAATGTGTCTTGAAATCAGAAAGTTGCTGCCGTCCTTGATGAGATGCCTCTCAGTTTGCATGATAAGTACCTTTTCTGTATCAGGTAAAAGGAAAAATGAATATTGTTTTCAGTCATTTGTAGATTTCAGAGCTTCTTATAGAAGAGGGCTTTTCACAGAAGAAAGTTTTAGTTTGAGAAAGTATACTAGTATTAATCTATTATCTCAAAGTCTTTTTCTTTTTTGAGTTCCTTGCAAACTCGTTTATACTAACGTCGGTGCCCCATTTTTAATGCAGCCCCGTGGATATGGCTGATGACATTACATCTCAAGGTCTTACACAGGTAGGTCTAATTAATCCGTGGTCATTGTTATATTTTATTTTCATCAATTGGCAACTTATATGATTGCATGCATCATGCATGATAAACAGTTTGCTCAAAATTATGCCAATAGAGGCATTGTTCGGCTACGAGAAATATTTACAGCAGGAACACTTCAAGTGCCAGAAACACAAGCTGCACTGAAGGAGCTGGAATCCATTCACAAGGTGAAAATATAATTCTAAGCTCTCTCTCTCCCCCGATGGAATTTGAAAATTGAACTTATTGGATGGTTCGAAAATTGTTTAGATTAACATAGTCTAGAAGTTGTTTCATATATCAATGAAATTGTTTCTTGAGAAAAAAAACATAGTCTAGAAGTTGAAACCACTCCATTACACAAATAAGTTACTTTAGAAACTATGGTGTTGTAAATGTTTAGGCACCCCCAAAAAGAAGATAAATAAACAAAATTGAGGCAGAAATTTTCATTAATCATATAATAATGGTATAGCTTGCTTTCATTCTAGCTTTTCCATGTTTGTCGAGCATTCCTGGTTGCAAAAGGGTGGCCAGAGTTAATTAACTTGTTTTTTTTTTGCTTTTTTTAGTTTTCTATTTCAGTATATTCAAGTCCATGGTGAAATGTTTTCTAACATGTATTCTACTGCCAAATGCTAAATTTATATGTCTGTTACCATTGAATTTGAAGGTGTTGGATCTCTATGTTTGGTTGAGTTTTCGACTGGATGAATCATTCCCGGACCGTGAACTGGCGGTTTCACAGAAGTCAGTCTGCAGCATGTATGACACCGAGTCCTTCCAAATCATTTAGACTCCGATCGATAACCATTTGGTTTTTGAAAACTGTGTTTGTTTTCTCATCATTTATCTACAATGGGTTTCATCTCTCTTAAAAAAAATATTTGAATTTTTTGTCCAATTCTAAAAACAGAAACAAGTTTTTGAAATTTTTTCTTCCCAAAACTTGGCTGGTTTGTTTAAAATATATATAAAAAGTAGATAATAAAACGAGAAACTTATACGTTGAAATAGTAGTTATAGGCTTAATTTTCAAAAAACTGAAAACCAAAAAACAAATGGTTATCAAACGGAACCTTATTTGCCTCATTATATTGTGTGATTTCTAATCTCTTCATATTGGTATGCAGGCTGATCGAGGAGTTTTTGGGAAGACTAGGATGGCAAAGACCAAGAACAAGGCAATTAAAGTCGAACATCCACTCAAGGTCCCTCCTATCCTCTGGTGTTAAACGACGTCTCTGA

mRNA sequence

ATGGCGTCCATGCATTTCTACCGCAAGCTCTTCTCTCCGGCGACTTATTCTGCTCTTCCCGGTTTTGTGGGGGCACTAAACCGGGATTTCCATTTGAATTTTGGACCTTCTTGTTGTAGGCGGTACAGTATCTACAGCAGTACCCATAAATTTGACTTCACAGACTTGACACGTCCCCATTCATGGTATCCAAATGCACGAAGTAAACGTCGCAAAATTTTTCTGCACATGGGTCCAACAAATAGTGGCAAAACTCACAATGCTTTGAAGAGGCTTGAATCAAGTGATTCTGGCATATATTGTGGTCCCCTGAGATTGTTGGCCTGGGAAGTGGCAAAGCGGTTGAATAAGGCTAAAATTCCCTGTGATCTAGTCACTGGACAAGAAAGAGAGGAAGTTGATGGTGCGAAACATAAGGCTGTGACTGTTGAGATGGCTGATGTAACCTCCAACTACAGTTGTGCTGTCATCGACGAAATTCAGATGTTGGGATGTAAGACAAGAGGTTATTCATTTACTCGTGCACTACTTGGAATTTGTGCTGATGAGCTTCATCTCTGTGGAGATGCGGCTGTTGTACCCCTTATTCAGGAAATTCTTAAAGTAACTGGTGATGACATTGAGGTGCAATACAATGAGAGACTTTCACCTCTGATTCCAATGAAAGTTCCACTTGGATCCTATTCTAATATTAGGACGGGTGATTGCATTGTTACCTTTTCACGTCCTAAAATATATGGTTATAAGAGAAAAATTGAGGGCGAAGGTAGACATCTATGCTCCGTAGTTTATGGTTCACTACCACCAGAAACTCGAACGAGGCAGGCCACGATGTTTAATGATACAACCAGTGAGTTTGATGTGCTGGTGGCTAGCGATGCCATTGGGATGGGTCTTAATTTGAACATCTCGAGGATCATATTTTCAACGATGGAGAAATTTGATGGTTTTGAGATGCGGGAGCTTACTGTACCAGAGATCAAACAGATTGCAGGTAGAGCTGGCAGGTATGGATCCAAATTTCCCATTGGTGAAGTAACTTGTATAAATGGAGATGATTTACCCTTACTGCATTCATCGCTAAAGTCCGCTTCTCCCACTATAGAGAGAGCTGGGCTATTTCCAACTTTTGAACTCATGTATTTATATTCCCGTCTACACCCAGAAAATGGCCTCCGGCAGATACTGGAGCACTTTGTTGAGAATGCTAAATTATCTGAAAATTATTTCATTGCTGACTGTGAAGAAATGTTGAAAGTTGCTGCCGTCCTTGATGAGATGCCTCTCAGTTTGCATGATAAGTACCTTTTCTGTATCAGCCCCGTGGATATGGCTGATGACATTACATCTCAAGGTCTTACACAGTTTGCTCAAAATTATGCCAATAGAGGCATTGTTCGGCTACGAGAAATATTTACAGCAGGAACACTTCAAGTGCCAGAAACACAAGCTGCACTGAAGGAGCTGGAATCCATTCACAAGGTGTTGGATCTCTATGTTTGGTTGAGTTTTCGACTGGATGAATCATTCCCGGACCGTGAACTGGCGGTTTCACAGAAGTCAGTCTGCAGCATGCTGATCGAGGAGTTTTTGGGAAGACTAGGATGGCAAAGACCAAGAACAAGGCAATTAAAGTCGAACATCCACTCAAGGTCCCTCCTATCCTCTGGTGTTAAACGACGTCTCTGA

Coding sequence (CDS)

ATGGCGTCCATGCATTTCTACCGCAAGCTCTTCTCTCCGGCGACTTATTCTGCTCTTCCCGGTTTTGTGGGGGCACTAAACCGGGATTTCCATTTGAATTTTGGACCTTCTTGTTGTAGGCGGTACAGTATCTACAGCAGTACCCATAAATTTGACTTCACAGACTTGACACGTCCCCATTCATGGTATCCAAATGCACGAAGTAAACGTCGCAAAATTTTTCTGCACATGGGTCCAACAAATAGTGGCAAAACTCACAATGCTTTGAAGAGGCTTGAATCAAGTGATTCTGGCATATATTGTGGTCCCCTGAGATTGTTGGCCTGGGAAGTGGCAAAGCGGTTGAATAAGGCTAAAATTCCCTGTGATCTAGTCACTGGACAAGAAAGAGAGGAAGTTGATGGTGCGAAACATAAGGCTGTGACTGTTGAGATGGCTGATGTAACCTCCAACTACAGTTGTGCTGTCATCGACGAAATTCAGATGTTGGGATGTAAGACAAGAGGTTATTCATTTACTCGTGCACTACTTGGAATTTGTGCTGATGAGCTTCATCTCTGTGGAGATGCGGCTGTTGTACCCCTTATTCAGGAAATTCTTAAAGTAACTGGTGATGACATTGAGGTGCAATACAATGAGAGACTTTCACCTCTGATTCCAATGAAAGTTCCACTTGGATCCTATTCTAATATTAGGACGGGTGATTGCATTGTTACCTTTTCACGTCCTAAAATATATGGTTATAAGAGAAAAATTGAGGGCGAAGGTAGACATCTATGCTCCGTAGTTTATGGTTCACTACCACCAGAAACTCGAACGAGGCAGGCCACGATGTTTAATGATACAACCAGTGAGTTTGATGTGCTGGTGGCTAGCGATGCCATTGGGATGGGTCTTAATTTGAACATCTCGAGGATCATATTTTCAACGATGGAGAAATTTGATGGTTTTGAGATGCGGGAGCTTACTGTACCAGAGATCAAACAGATTGCAGGTAGAGCTGGCAGGTATGGATCCAAATTTCCCATTGGTGAAGTAACTTGTATAAATGGAGATGATTTACCCTTACTGCATTCATCGCTAAAGTCCGCTTCTCCCACTATAGAGAGAGCTGGGCTATTTCCAACTTTTGAACTCATGTATTTATATTCCCGTCTACACCCAGAAAATGGCCTCCGGCAGATACTGGAGCACTTTGTTGAGAATGCTAAATTATCTGAAAATTATTTCATTGCTGACTGTGAAGAAATGTTGAAAGTTGCTGCCGTCCTTGATGAGATGCCTCTCAGTTTGCATGATAAGTACCTTTTCTGTATCAGCCCCGTGGATATGGCTGATGACATTACATCTCAAGGTCTTACACAGTTTGCTCAAAATTATGCCAATAGAGGCATTGTTCGGCTACGAGAAATATTTACAGCAGGAACACTTCAAGTGCCAGAAACACAAGCTGCACTGAAGGAGCTGGAATCCATTCACAAGGTGTTGGATCTCTATGTTTGGTTGAGTTTTCGACTGGATGAATCATTCCCGGACCGTGAACTGGCGGTTTCACAGAAGTCAGTCTGCAGCATGCTGATCGAGGAGTTTTTGGGAAGACTAGGATGGCAAAGACCAAGAACAAGGCAATTAAAGTCGAACATCCACTCAAGGTCCCTCCTATCCTCTGGTGTTAAACGACGTCTCTGA

Protein sequence

MASMHFYRKLFSPATYSALPGFVGALNRDFHLNFGPSCCRRYSIYSSTHKFDFTDLTRPHSWYPNARSKRRKIFLHMGPTNSGKTHNALKRLESSDSGIYCGPLRLLAWEVAKRLNKAKIPCDLVTGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGICADELHLCGDAAVVPLIQEILKVTGDDIEVQYNERLSPLIPMKVPLGSYSNIRTGDCIVTFSRPKIYGYKRKIEGEGRHLCSVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLNLNISRIIFSTMEKFDGFEMRELTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSSLKSASPTIERAGLFPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKVAAVLDEMPLSLHDKYLFCISPVDMADDITSQGLTQFAQNYANRGIVRLREIFTAGTLQVPETQAALKELESIHKVLDLYVWLSFRLDESFPDRELAVSQKSVCSMLIEEFLGRLGWQRPRTRQLKSNIHSRSLLSSGVKRRL

Homology

[Close]

BLAST of Tan0003248 vs. ExPASy Swiss-Prot
Match: Q10D00 (ATP-dependent RNA helicase SUV3, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SUV3 PE=1 SV=1)

HSP 1 Score: 776.9 bits (2005), Expect = 1.5e-223
Identity = 366/494 (74.09%), Postives = 434/494 (87.85%), Query Frame = 0


Query: 45  YSSTHKFDFTDLTRPHSWYPNARSKRRKIFLHMGPTNSGKTHNALKRLESSDSGIYCGPL 104
           Y ++ KFD TDLT PH WYPNAR K+R +FLH+GPTNSGKTHNALKRLE+S SG+YCGPL
Sbjct: 52  YHNSGKFDLTDLTHPHIWYPNAREKKRNVFLHVGPTNSGKTHNALKRLEASSSGVYCGPL 111

Query: 105 RLLAWEVAKRLNKAKIPCDLVTGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLG 164
           RLLA EVA+RLNKA +PC+L+TGQEREE++GAKH +VTVEMAD+T+ Y CAVIDEIQM+G
Sbjct: 112 RLLAREVAQRLNKANVPCNLITGQEREEIEGAKHSSVTVEMADMTTEYQCAVIDEIQMVG 171

Query: 165 CKTRGYSFTRALLGICADELHLCGDAAVVPLIQEILKVTGDDIEVQYNERLSPLIPMKVP 224
           C++RG+SFTRALLG+C+DELH+CGD AVVPLIQ IL+ TGD + VQY ERLSPL+P+K  
Sbjct: 172 CRSRGFSFTRALLGLCSDELHVCGDPAVVPLIQRILEPTGDVVTVQYYERLSPLVPLKTT 231

Query: 225 LGSYSNIRTGDCIVTFSRPKIYGYKRKIEGEGRHLCSVVYGSLPPETRTRQATMFNDTTS 284
           LGS+SNI+ GDC+VTFSR  IY  KR+IE  G+HLCSVVYGSLPPETRT+QATMFND  S
Sbjct: 232 LGSFSNIKAGDCVVTFSRRSIYMLKRRIEMGGKHLCSVVYGSLPPETRTKQATMFNDQDS 291

Query: 285 EFDVLVASDAIGMGLNLNISRIIFSTMEKFDGFEMRELTVPEIKQIAGRAGRYGSKFPIG 344
             +VLVASDAIGMGLNLNISRIIFST+EKFDG   RELTV EIKQIAGRAGRYGSKFP+G
Sbjct: 292 NLNVLVASDAIGMGLNLNISRIIFSTLEKFDGICNRELTVAEIKQIAGRAGRYGSKFPVG 351

Query: 345 EVTCINGDDLPLLHSSLKSASPTIERAGLFPTFELMYLYSRLHPENGLRQILEHFVENAK 404
           EVTC+N D LPLLHS+LKS SP IERAGLFPTF+++ LYSRLH  +  + ILE F++ AK
Sbjct: 352 EVTCLNSDHLPLLHSALKSPSPIIERAGLFPTFDVLSLYSRLHGTDFFQPILERFLDKAK 411

Query: 405 LSENYFIADCEEMLKVAAVLDEMPLSLHDKYLFCISPVDMADDITSQGLTQFAQNYANRG 464
           LS +YFIADCE+MLKVAA++DE+PL L+DKYLFC+SPVD+ DDI+++GL QFA+NYA +G
Sbjct: 412 LSPDYFIADCEDMLKVAAIVDELPLGLYDKYLFCLSPVDIRDDISTKGLIQFAENYAKKG 471

Query: 465 IVRLREIFTAGTLQVPETQAALKELESIHKVLDLYVWLSFRLDESFPDRELAVSQKSVCS 524
           IVRL+EIFT GTLQVP++   LKELESIHKVL+LYVWLSFRL++S+PDRELA SQKS+CS
Sbjct: 472 IVRLKEIFTPGTLQVPKSHNQLKELESIHKVLELYVWLSFRLEDSYPDRELAASQKSICS 531

Query: 525 MLIEEFLGRLGWQR 539
           MLIEE+L R GWQ+
Sbjct: 532 MLIEEYLERSGWQQ 545

[Close]

BLAST of Tan0003248 vs. ExPASy Swiss-Prot
Match: Q9SMX1 (DExH-box ATP-dependent RNA helicase DExH16, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SUV3 PE=1 SV=1)

HSP 1 Score: 755.0 bits (1948), Expect = 6.1e-217
Identity = 361/509 (70.92%), Postives = 434/509 (85.27%), Query Frame = 0


Query: 23  VGALNRDFHLNFGPSCCRRYSIYSSTHKFDFTDLTRPHSWYPNARSKRRKIFLHMGPTNS 82
           +G L R++  N G S    ++   +T KFDFTDLT PH+WYP AR K+RK+ LH+GPTNS
Sbjct: 42  LGVLTRNYRKNSG-SPKFDFTGTGTTSKFDFTDLTCPHTWYPIARKKKRKVILHVGPTNS 101

Query: 83  GKTHNALKRLESSDSGIYCGPLRLLAWEVAKRLNKAKIPCDLVTGQEREEVDGAKHKAVT 142
           GKT++ALK LE S SG+YCGPLRLLAWEVAKRLNKA +PCDL+TGQE++ V+GA HKAVT
Sbjct: 102 GKTYSALKHLEQSSSGVYCGPLRLLAWEVAKRLNKANVPCDLITGQEKDLVEGATHKAVT 161

Query: 143 VEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGICADELHLCGDAAVVPLIQEILKV 202
           VEMADVTS Y CA+IDEIQM+GCK RG++FTRALLGI ADELHLCGD AVVPL+++ILKV
Sbjct: 162 VEMADVTSVYDCAIIDEIQMVGCKQRGFAFTRALLGIAADELHLCGDPAVVPLVEDILKV 221

Query: 203 TGDDIEVQYNERLSPLIPMKVPLGSYSNIRTGDCIVTFSRPKIYGYKRKIEGEGRHLCSV 262
           TGDD+EV   ERLSPL+P+KVP+ S S+I+TGDC+VTFSR  IY YK+ IE  G+HLCSV
Sbjct: 222 TGDDVEVHTYERLSPLVPLKVPVSSVSSIKTGDCLVTFSRKDIYAYKKTIERAGKHLCSV 281

Query: 263 VYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLNLNISRIIFSTMEKFDGFEMREL 322
           VYGSLPPETRT QAT FND T++FDVLVASDAIGMGLNLNISRIIFST++K+DG E R+L
Sbjct: 282 VYGSLPPETRTAQATRFNDETNDFDVLVASDAIGMGLNLNISRIIFSTLQKYDGSETRDL 341

Query: 323 TVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSSLKSASPTIERAGLFPTFELMYL 382
           TV EIKQIAGRAGR+ SKFPIGEVTC++ +DLPLLHSSLKS SP +ERAGLFPTF+L+  
Sbjct: 342 TVSEIKQIAGRAGRFQSKFPIGEVTCLHKEDLPLLHSSLKSPSPILERAGLFPTFDLLSG 401

Query: 383 YSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKVAAVLDEMPLSLHDKYLFCISPV 442
           YS+ HP +GL QILEHFVENAKLS NYFI++ E+M+KVAA++DE+PL L +KYLF +SPV
Sbjct: 402 YSQAHPTHGLYQILEHFVENAKLSSNYFISNVEDMMKVAAIVDELPLGLQEKYLFVVSPV 461

Query: 443 DMADDITSQGLTQFAQNYANRGIVRLREIFTAGTLQVPETQAALKELESIHKVLDLYVWL 502
           D+ D+I+ QGL QFAQN++  GIVRLREI     ++VP+T   LKELESIHKVLDLYVWL
Sbjct: 462 DVNDEISGQGLAQFAQNFSKAGIVRLREILAPDRVKVPKTPTELKELESIHKVLDLYVWL 521

Query: 503 SFRLDESFPDRELAVSQKSVCSMLIEEFL 532
           S RL++SFPDRE+A SQKS+C++LIE+FL
Sbjct: 522 SLRLEDSFPDREVAASQKSICNLLIEQFL 549

[Close]

BLAST of Tan0003248 vs. ExPASy Swiss-Prot
Match: Q01IJ3 (ATP-dependent RNA helicase SUV3L, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=H0219H12.4 PE=3 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.2e-114
Identity = 216/492 (43.90%), Postives = 306/492 (62.20%), Query Frame = 0


Query: 55  DLTRPHSWYPNARSKRRKIFLHMGPTNSGKTHNALKRLESSDSGIYCGPLRLLAWEVAKR 114
           DLT PH+WYP AR+ RR++  H GPTNSGKTHNAL R  ++ SG+YC PLRLLA EV  +
Sbjct: 188 DLTAPHAWYPFARAMRRRVVYHCGPTNSGKTHNALTRFAAAKSGVYCSPLRLLAMEVFDK 247

Query: 115 LNKAKIPCDLVTGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTR 174
           +N   + C L TGQE +EV  + H A T+EM      Y  AV+DEIQM+    RGY++TR
Sbjct: 248 VNALGVYCSLRTGQEIKEVPFSNHVACTIEMLSTEEPYEVAVVDEIQMMADPVRGYAWTR 307

Query: 175 ALLGICADELHLCGDAAVVPLIQEILKVTGDDIEVQYNERLSPL-IPMKVPLGSYSNIRT 234
           A+LG+ ADE+HLCGD +V+ ++++I   TGDD+EV   ER  PL +  K  LG   N+R+
Sbjct: 308 AVLGLKADEIHLCGDPSVLKIVRKICADTGDDLEVHQYERFKPLVVEAKTLLGDLKNVRS 367

Query: 235 GDCIVTFSRPKIYGYKRKIEGEGRHLCSVVYGSLPPETRTRQATMFNDTTSEFDVLVASD 294
           GDCIV FSR +I+  K  IE   +H C V+YG+LPPETR +QA +FN+  +E+DVLVASD
Sbjct: 368 GDCIVAFSRREIFEVKLAIEKFTKHKCCVIYGALPPETRRQQAKLFNEQDNEYDVLVASD 427

Query: 295 AIGMGLNLNISRIIFSTMEKFDGFEMRELTVPEIKQIAGRAGRYGSKFPIGEVTCINGDD 354
           A+GMGLNLNI R++F ++ K++G  M  +   ++KQIAGRAGR GS +P G  T    DD
Sbjct: 428 AVGMGLNLNIRRVVFYSLAKYNGDRMVPVAASQVKQIAGRAGRRGSIYPDGLTTTFLLDD 487

Query: 355 LPLLHSSLKSASPTIERAGLFPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIAD 414
           L  L   L+      ++ GLFP FE +  ++   P+    ++L+ F EN ++   YF+  
Sbjct: 488 LDYLIQCLQQPFEEAKKVGLFPCFEQVESFAIQFPDLTFNELLDKFRENCRVDSTYFMCH 547

Query: 415 CEEMLKVAAVLDEMP-LSLHDKYLFCISPVDMADDITSQGLTQFAQNYANRGIVRLREIF 474
            E + KVA +L+ +  LSL D+Y FC +PV++ D      L +FA NY+    V +    
Sbjct: 548 QESIKKVANMLERIQGLSLKDRYNFCFAPVNIRDPKAMYHLLRFATNYSQSRRVSIAMGM 607

Query: 475 TAGTLQVPETQAALKELESIHKVLDLYVWLSFRLDES-FPDRELAVSQKSVCSMLIEEFL 534
             G+    +    L +LE+ H+VL +Y+WLS   +E  FP  + A       + L+ + L
Sbjct: 608 PKGS---AKNDTELLDLETKHQVLSMYLWLSHHFEEDHFPHVQKAEEMSINIADLLAKSL 667

Query: 535 GRLGWQRPRTRQ 544
            +  W +P +RQ
Sbjct: 668 AKASW-KPTSRQ 675

[Close]

BLAST of Tan0003248 vs. ExPASy Swiss-Prot
Match: Q7X745 (ATP-dependent RNA helicase SUV3L, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os04g38630 PE=2 SV=2)

HSP 1 Score: 415.2 bits (1066), Expect = 1.2e-114
Identity = 216/492 (43.90%), Postives = 306/492 (62.20%), Query Frame = 0


Query: 55  DLTRPHSWYPNARSKRRKIFLHMGPTNSGKTHNALKRLESSDSGIYCGPLRLLAWEVAKR 114
           DLT PH+WYP AR+ RR++  H GPTNSGKTHNAL R  ++ SG+YC PLRLLA EV  +
Sbjct: 188 DLTAPHAWYPFARAMRRRVVYHCGPTNSGKTHNALTRFAAAKSGVYCSPLRLLAMEVFDK 247

Query: 115 LNKAKIPCDLVTGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTR 174
           +N   + C L TGQE +EV  + H A T+EM      Y  AV+DEIQM+    RGY++TR
Sbjct: 248 VNALGVYCSLRTGQEIKEVPFSNHVACTIEMLSTEEPYEVAVVDEIQMMADPVRGYAWTR 307

Query: 175 ALLGICADELHLCGDAAVVPLIQEILKVTGDDIEVQYNERLSPL-IPMKVPLGSYSNIRT 234
           A+LG+ ADE+HLCGD +V+ ++++I   TGDD+EV   ER  PL +  K  LG   N+R+
Sbjct: 308 AVLGLKADEIHLCGDPSVLKIVRKICADTGDDLEVHQYERFKPLVVEAKTLLGDLKNVRS 367

Query: 235 GDCIVTFSRPKIYGYKRKIEGEGRHLCSVVYGSLPPETRTRQATMFNDTTSEFDVLVASD 294
           GDCIV FSR +I+  K  IE   +H C V+YG+LPPETR +QA +FN+  +E+DVLVASD
Sbjct: 368 GDCIVAFSRREIFEVKLAIEKFTKHKCCVIYGALPPETRRQQAKLFNEQDNEYDVLVASD 427

Query: 295 AIGMGLNLNISRIIFSTMEKFDGFEMRELTVPEIKQIAGRAGRYGSKFPIGEVTCINGDD 354
           A+GMGLNLNI R++F ++ K++G  M  +   ++KQIAGRAGR GS +P G  T    DD
Sbjct: 428 AVGMGLNLNIRRVVFYSLAKYNGDRMVPVAASQVKQIAGRAGRRGSIYPDGLTTTFLLDD 487

Query: 355 LPLLHSSLKSASPTIERAGLFPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIAD 414
           L  L   L+      ++ GLFP FE +  ++   P+    ++L+ F EN ++   YF+  
Sbjct: 488 LDYLIQCLQQPFEEAKKVGLFPCFEQVESFAIQFPDLTFNELLDKFRENCRVDSTYFMCH 547

Query: 415 CEEMLKVAAVLDEMP-LSLHDKYLFCISPVDMADDITSQGLTQFAQNYANRGIVRLREIF 474
            E + KVA +L+ +  LSL D+Y FC +PV++ D      L +FA NY+    V +    
Sbjct: 548 QESIKKVANMLERIQGLSLKDRYNFCFAPVNIRDPKAMYHLLRFATNYSQSRRVSIAMGM 607

Query: 475 TAGTLQVPETQAALKELESIHKVLDLYVWLSFRLDES-FPDRELAVSQKSVCSMLIEEFL 534
             G+    +    L +LE+ H+VL +Y+WLS   +E  FP  + A       + L+ + L
Sbjct: 608 PKGS---AKNDTELLDLETKHQVLSMYLWLSHHFEEDHFPHVQKAEEMSINIADLLAKSL 667

Query: 535 GRLGWQRPRTRQ 544
            +  W +P +RQ
Sbjct: 668 AKASW-KPTSRQ 675

[Close]

BLAST of Tan0003248 vs. ExPASy Swiss-Prot
Match: F4KFV7 (DExH-box ATP-dependent RNA helicase DExH18, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g39840 PE=3 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 4.8e-113
Identity = 203/488 (41.60%), Postives = 315/488 (64.55%), Query Frame = 0


Query: 52  DFTDLTRPHSWYPNARSKRRKIFLHMGPTNSGKTHNALKRLESSDSGIYCGPLRLLAWEV 111
           D  DLT+P +W+P AR+ +RKI  H GPTNSGKT+NAL+R   + +G+YC PLRLLA EV
Sbjct: 255 DTADLTKPATWFPFARAMKRKIVYHCGPTNSGKTYNALQRFMEAKNGLYCSPLRLLAMEV 314

Query: 112 AKRLNKAKIPCDLVTGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYS 171
             ++N   I C L+TGQE++ V  A H + TVEM      Y  AV+DEIQM+   +RG++
Sbjct: 315 FDKVNALGIYCSLLTGQEKKYVPFANHVSCTVEMVSTDELYEVAVLDEIQMMADPSRGHA 374

Query: 172 FTRALLGICADELHLCGDAAVVPLIQEILKVTGDDIEVQYNERLSPL-IPMKVPLGSYSN 231
           +T+ALLG+ ADE+HLCGD +V+ +++++   TGD++  ++ ER  PL +  K  LG   N
Sbjct: 375 WTKALLGLKADEIHLCGDPSVLDIVRKMCADTGDELVEEHYERFKPLVVEAKTLLGELKN 434

Query: 232 IRTGDCIVTFSRPKIYGYKRKIEGEGRHLCSVVYGSLPPETRTRQATMFNDTTSEFDVLV 291
           +++GDC+V FSR +I+  K  IE    H C V+YG+LPPETR +QA +FND  +E+DVLV
Sbjct: 435 VKSGDCVVAFSRREIFEVKMAIEKHTNHRCCVIYGALPPETRRQQAKLFNDQENEYDVLV 494

Query: 292 ASDAIGMGLNLNISRIIFSTMEKFDGFEMRELTVPEIKQIAGRAGRYGSKFPIGEVTCIN 351
           ASDA+GMGLNLNI R++F ++ K++G ++  +   ++KQIAGRAGR GS++P G  T ++
Sbjct: 495 ASDAVGMGLNLNIRRVVFYSLNKYNGDKIVPVAASQVKQIAGRAGRRGSRYPDGLTTTLH 554

Query: 352 GDDLPLLHSSLKSASPTIERAGLFPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYF 411
            +DL  L   L+     + + GLFP FE + L++   P+     +LEHF ++ +L  +YF
Sbjct: 555 LEDLNYLIECLQQPFDEVTKVGLFPFFEQIELFAAQVPDMAFSNLLEHFGKHCRLDGSYF 614

Query: 412 IADCEEMLKVAAVLDEMP-LSLHDKYLFCISPVDMADDITSQGLTQFAQNYANRGIVRLR 471
           +   + + KVA +L+++  LSL D++ FC +PV++ +      L +FA +Y+    V + 
Sbjct: 615 LCRHDHVKKVANMLEKVEGLSLEDRFNFCFAPVNIRNPRAMHNLYRFASSYSQNMPVNVA 674

Query: 472 EIFTAGTLQVPETQAALKELESIHKVLDLYVWLSFRLDESFPDRELAVSQKSVCSMLIEE 531
                 +    ++ A L +LES H++L +Y+WLS + +E+FP  E   +  +  + L+ E
Sbjct: 675 MGIPKSS---AKSDAQLLDLESRHQILSMYLWLSNQFEENFPFVEKVEAMATNIAELLGE 734

Query: 532 FLGRLGWQ 538
            L +  W+
Sbjct: 735 SLSKASWK 739

[Close]

BLAST of Tan0003248 vs. NCBI nr
Match: XP_022979543.1 (ATP-dependent RNA helicase SUV3, mitochondrial isoform X1 [Cucurbita maxima])

HSP 1 Score: 1083.6 bits (2801), Expect = 0.0e+00
Identity = 533/562 (94.84%), Postives = 544/562 (96.80%), Query Frame = 0


Query: 1   MASMHFYRKLFSPATYSALPGFVGALNRDFHLNFGPSCCRRYSIYSSTHKFDFTDLTRPH 60
           MASM+F R LFSPA YSALPGFVGA+N++F L FGPSCCR YSIYSSTHKFDFTDLTRPH
Sbjct: 3   MASMYFCRMLFSPAGYSALPGFVGAVNQEFQLKFGPSCCRLYSIYSSTHKFDFTDLTRPH 62

Query: 61  SWYPNARSKRRKIFLHMGPTNSGKTHNALKRLESSDSGIYCGPLRLLAWEVAKRLNKAKI 120
           SWYPNAR K RKIFLHMGPTNSGKTHNALKRLESSDSG+YCGPLRLLAWEV+KRLNKAKI
Sbjct: 63  SWYPNARRKHRKIFLHMGPTNSGKTHNALKRLESSDSGLYCGPLRLLAWEVSKRLNKAKI 122

Query: 121 PCDLVTGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGIC 180
           PCDL+TGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGIC
Sbjct: 123 PCDLITGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGIC 182

Query: 181 ADELHLCGDAAVVPLIQEILKVTGDDIEVQYNERLSPLIPMKVPLGSYSNIRTGDCIVTF 240
           ADELHLCGDAAVVPLIQEILKVTGDDIEVQY ERLSPLIPMKVPLG YSNIR GDCIVTF
Sbjct: 183 ADELHLCGDAAVVPLIQEILKVTGDDIEVQYYERLSPLIPMKVPLGPYSNIRKGDCIVTF 242

Query: 241 SRPKIYGYKRKIEGEGRHLCSVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLN 300
           SR KIY YKRKIE EG HLCSVVYGSLPPETRTRQATMFNDT SEFDVLVASDAIGMGLN
Sbjct: 243 SRRKIYAYKRKIESEGGHLCSVVYGSLPPETRTRQATMFNDTASEFDVLVASDAIGMGLN 302

Query: 301 LNISRIIFSTMEKFDGFEMRELTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSS 360
           LNISRIIFSTMEKFDGFEMRELTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSS
Sbjct: 303 LNISRIIFSTMEKFDGFEMRELTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSS 362

Query: 361 LKSASPTIERAGLFPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKV 420
           LKSASPTIERAGLFPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKV
Sbjct: 363 LKSASPTIERAGLFPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKV 422

Query: 421 AAVLDEMPLSLHDKYLFCISPVDMADDITSQGLTQFAQNYANRGIVRLREIFTAGTLQVP 480
           AAVLDEMPLSLHDKYLFCISPVDMAD+ITSQGLTQFA  YAN+GIVRLREIFTAGTLQVP
Sbjct: 423 AAVLDEMPLSLHDKYLFCISPVDMADEITSQGLTQFATKYANKGIVRLREIFTAGTLQVP 482

Query: 481 ETQAALKELESIHKVLDLYVWLSFRLDESFPDRELAVSQKSVCSMLIEEFLGRLGWQRPR 540
           ETQAALKELES+HKVLDLYVWLSFRL+ESFPDRELAVSQKSVCSMLIEEFLGRLGWQRPR
Sbjct: 483 ETQAALKELESVHKVLDLYVWLSFRLEESFPDRELAVSQKSVCSMLIEEFLGRLGWQRPR 542

Query: 541 TRQLKSNIHSRSLLSSGVKRRL 563
           TRQLKSNIHSRSLLSSGVKRRL
Sbjct: 543 TRQLKSNIHSRSLLSSGVKRRL 564

[Close]

BLAST of Tan0003248 vs. NCBI nr
Match: XP_023527154.1 (ATP-dependent RNA helicase SUV3, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1078.5 bits (2788), Expect = 0.0e+00
Identity = 528/562 (93.95%), Postives = 545/562 (96.98%), Query Frame = 0


Query: 1   MASMHFYRKLFSPATYSALPGFVGALNRDFHLNFGPSCCRRYSIYSSTHKFDFTDLTRPH 60
           MASM+F R+LFSPA YSALPGFVGA+N++F L FGPSCCR YSIYSSTHKFDFTDLTRPH
Sbjct: 3   MASMYFCRRLFSPAGYSALPGFVGAVNQEFQLKFGPSCCRLYSIYSSTHKFDFTDLTRPH 62

Query: 61  SWYPNARSKRRKIFLHMGPTNSGKTHNALKRLESSDSGIYCGPLRLLAWEVAKRLNKAKI 120
           SWYPNAR K RKIFLHMGPTNSGKTHNALKRLESSDSG+YCGPLRLLAWEV+KRLNKAKI
Sbjct: 63  SWYPNARRKHRKIFLHMGPTNSGKTHNALKRLESSDSGLYCGPLRLLAWEVSKRLNKAKI 122

Query: 121 PCDLVTGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGIC 180
           PCDL+TGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGIC
Sbjct: 123 PCDLITGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGIC 182

Query: 181 ADELHLCGDAAVVPLIQEILKVTGDDIEVQYNERLSPLIPMKVPLGSYSNIRTGDCIVTF 240
           ADELHLCGDAAVVPL+QEILKVTGDDIEVQY ERLSPLIPMKVPLG YSNIR GDCIVTF
Sbjct: 183 ADELHLCGDAAVVPLVQEILKVTGDDIEVQYYERLSPLIPMKVPLGPYSNIRKGDCIVTF 242

Query: 241 SRPKIYGYKRKIEGEGRHLCSVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLN 300
           SR KIY YKRKIE EG HLCSVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLN
Sbjct: 243 SRRKIYAYKRKIESEGGHLCSVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLN 302

Query: 301 LNISRIIFSTMEKFDGFEMRELTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSS 360
           LNISRIIFSTMEKFDGFEMR+LTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSS
Sbjct: 303 LNISRIIFSTMEKFDGFEMRDLTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSS 362

Query: 361 LKSASPTIERAGLFPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKV 420
           LKSASPTIERAGLFPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKV
Sbjct: 363 LKSASPTIERAGLFPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKV 422

Query: 421 AAVLDEMPLSLHDKYLFCISPVDMADDITSQGLTQFAQNYANRGIVRLREIFTAGTLQVP 480
           AAVLDEMPLSLHDKYLFCISPVDMAD+ITSQGLTQFA  YAN+G+VRLREIFTAGTLQVP
Sbjct: 423 AAVLDEMPLSLHDKYLFCISPVDMADEITSQGLTQFATKYANKGVVRLREIFTAGTLQVP 482

Query: 481 ETQAALKELESIHKVLDLYVWLSFRLDESFPDRELAVSQKSVCSMLIEEFLGRLGWQRPR 540
           ETQAALKELES+HKVLDLYVWLSFRL+ESFPDRELAVSQKSVCSMLIEEFLGRLGWQRP+
Sbjct: 483 ETQAALKELESVHKVLDLYVWLSFRLEESFPDRELAVSQKSVCSMLIEEFLGRLGWQRPK 542

Query: 541 TRQLKSNIHSRSLLSSGVKRRL 563
           TRQLKS+I SRSLLSSGVKRRL
Sbjct: 543 TRQLKSSIRSRSLLSSGVKRRL 564

[Close]

BLAST of Tan0003248 vs. NCBI nr
Match: XP_022955798.1 (ATP-dependent RNA helicase SUV3, mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 1075.1 bits (2779), Expect = 0.0e+00
Identity = 528/562 (93.95%), Postives = 543/562 (96.62%), Query Frame = 0


Query: 1   MASMHFYRKLFSPATYSALPGFVGALNRDFHLNFGPSCCRRYSIYSSTHKFDFTDLTRPH 60
           MASM+F R LFSPA YSALPGFVGA+N++F L FGPSCCR YSIYSSTHKFDFTDLTRPH
Sbjct: 3   MASMYFCRMLFSPAGYSALPGFVGAVNQEFQLKFGPSCCRLYSIYSSTHKFDFTDLTRPH 62

Query: 61  SWYPNARSKRRKIFLHMGPTNSGKTHNALKRLESSDSGIYCGPLRLLAWEVAKRLNKAKI 120
           SWYPNAR K RKIFLHMGPTNSGKTHNALKRLESSDSG+YCGPLRLLAWEV+KRLNKAKI
Sbjct: 63  SWYPNARRKHRKIFLHMGPTNSGKTHNALKRLESSDSGLYCGPLRLLAWEVSKRLNKAKI 122

Query: 121 PCDLVTGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGIC 180
           PCDL+TGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGIC
Sbjct: 123 PCDLITGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGIC 182

Query: 181 ADELHLCGDAAVVPLIQEILKVTGDDIEVQYNERLSPLIPMKVPLGSYSNIRTGDCIVTF 240
           ADELHLCGDAAVVPLIQEILKVTGDDIEVQY ERLSPLIPMKVPLG YSNIR GDCIVTF
Sbjct: 183 ADELHLCGDAAVVPLIQEILKVTGDDIEVQYYERLSPLIPMKVPLGPYSNIRKGDCIVTF 242

Query: 241 SRPKIYGYKRKIEGEGRHLCSVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLN 300
           SR KIY YKRKIE EG  LCSVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLN
Sbjct: 243 SRRKIYAYKRKIESEGGQLCSVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLN 302

Query: 301 LNISRIIFSTMEKFDGFEMRELTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSS 360
           LNISRIIFSTMEKFDGFEMR+LTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSS
Sbjct: 303 LNISRIIFSTMEKFDGFEMRDLTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSS 362

Query: 361 LKSASPTIERAGLFPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKV 420
           LKSASPTIERAG+FPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKV
Sbjct: 363 LKSASPTIERAGIFPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKV 422

Query: 421 AAVLDEMPLSLHDKYLFCISPVDMADDITSQGLTQFAQNYANRGIVRLREIFTAGTLQVP 480
           AAVLDEMPLSLHDKYLFCISPVDMAD+ITSQGLTQFA  YAN+G+VRLREIFTAGTLQVP
Sbjct: 423 AAVLDEMPLSLHDKYLFCISPVDMADEITSQGLTQFATKYANKGVVRLREIFTAGTLQVP 482

Query: 481 ETQAALKELESIHKVLDLYVWLSFRLDESFPDRELAVSQKSVCSMLIEEFLGRLGWQRPR 540
           ETQAALKELES+HKVLDLYVWLSFRL+ESFPDRELAVSQKSVCSMLIEEFLGRLGWQRPR
Sbjct: 483 ETQAALKELESVHKVLDLYVWLSFRLEESFPDRELAVSQKSVCSMLIEEFLGRLGWQRPR 542

Query: 541 TRQLKSNIHSRSLLSSGVKRRL 563
           TRQLKS+I SRSLLSSGVKRRL
Sbjct: 543 TRQLKSSIRSRSLLSSGVKRRL 564

[Close]

BLAST of Tan0003248 vs. NCBI nr
Match: KAG7018725.1 (ATP-dependent RNA helicase SUV3, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1072.0 bits (2771), Expect = 1.7e-309
Identity = 526/562 (93.59%), Postives = 542/562 (96.44%), Query Frame = 0


Query: 1   MASMHFYRKLFSPATYSALPGFVGALNRDFHLNFGPSCCRRYSIYSSTHKFDFTDLTRPH 60
           M SM+F R LFSPA YSALPGFVGA+N++F L FGPSCCR YSIYSSTHKFDFTDLTRPH
Sbjct: 3   MTSMYFCRMLFSPAGYSALPGFVGAVNQEFQLKFGPSCCRLYSIYSSTHKFDFTDLTRPH 62

Query: 61  SWYPNARSKRRKIFLHMGPTNSGKTHNALKRLESSDSGIYCGPLRLLAWEVAKRLNKAKI 120
           SWYPNAR K RKIFLHMGPTNSGKTHNALKRLESSDSG+YCGPLRLLAWEV+KRLNKAKI
Sbjct: 63  SWYPNARRKHRKIFLHMGPTNSGKTHNALKRLESSDSGLYCGPLRLLAWEVSKRLNKAKI 122

Query: 121 PCDLVTGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGIC 180
           PCDL+TGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGIC
Sbjct: 123 PCDLITGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGIC 182

Query: 181 ADELHLCGDAAVVPLIQEILKVTGDDIEVQYNERLSPLIPMKVPLGSYSNIRTGDCIVTF 240
           ADELHLCGDAAVVPLIQEILKVTGDDI+VQY ERLSPLIPMKVPLG YSNIR GDCIVTF
Sbjct: 183 ADELHLCGDAAVVPLIQEILKVTGDDIKVQYYERLSPLIPMKVPLGPYSNIRKGDCIVTF 242

Query: 241 SRPKIYGYKRKIEGEGRHLCSVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLN 300
           SR KIY YKRKIE EG  LCSVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLN
Sbjct: 243 SRRKIYAYKRKIESEGGQLCSVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLN 302

Query: 301 LNISRIIFSTMEKFDGFEMRELTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSS 360
           LNISRIIFSTMEKFDGFEMR+LTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSS
Sbjct: 303 LNISRIIFSTMEKFDGFEMRDLTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSS 362

Query: 361 LKSASPTIERAGLFPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKV 420
           LKSASPTIERAG+FPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKV
Sbjct: 363 LKSASPTIERAGIFPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKV 422

Query: 421 AAVLDEMPLSLHDKYLFCISPVDMADDITSQGLTQFAQNYANRGIVRLREIFTAGTLQVP 480
           AAVLDEMPLSLHDKYLFCISPVDMAD+ITSQGLTQFA  YAN+G+VRLREIFTAGTLQVP
Sbjct: 423 AAVLDEMPLSLHDKYLFCISPVDMADEITSQGLTQFATKYANKGVVRLREIFTAGTLQVP 482

Query: 481 ETQAALKELESIHKVLDLYVWLSFRLDESFPDRELAVSQKSVCSMLIEEFLGRLGWQRPR 540
           ETQAALKELES+HKVLDLYVWLSFRL+ESFPDRELAVSQKSVCSMLIEEFLGRLGWQRPR
Sbjct: 483 ETQAALKELESVHKVLDLYVWLSFRLEESFPDRELAVSQKSVCSMLIEEFLGRLGWQRPR 542

Query: 541 TRQLKSNIHSRSLLSSGVKRRL 563
           TRQLKS+I SRSLLSSGVKRRL
Sbjct: 543 TRQLKSSIRSRSLLSSGVKRRL 564

[Close]

BLAST of Tan0003248 vs. NCBI nr
Match: KAG6582314.1 (ATP-dependent RNA helicase SUV3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1071.2 bits (2769), Expect = 3.0e-309
Identity = 526/562 (93.59%), Postives = 542/562 (96.44%), Query Frame = 0


Query: 1   MASMHFYRKLFSPATYSALPGFVGALNRDFHLNFGPSCCRRYSIYSSTHKFDFTDLTRPH 60
           M SM+F R LFSPA YSALPGF+GA+N++F L FGPSCCR YSIYSSTHKFDFTDLTRPH
Sbjct: 3   MTSMYFCRMLFSPAGYSALPGFMGAVNQEFQLKFGPSCCRLYSIYSSTHKFDFTDLTRPH 62

Query: 61  SWYPNARSKRRKIFLHMGPTNSGKTHNALKRLESSDSGIYCGPLRLLAWEVAKRLNKAKI 120
           SWYPNAR K RKIFLHMGPTNSGKTHNALKRLESSDSG+YCGPLRLLAWEV+KRLNKAKI
Sbjct: 63  SWYPNARRKHRKIFLHMGPTNSGKTHNALKRLESSDSGLYCGPLRLLAWEVSKRLNKAKI 122

Query: 121 PCDLVTGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGIC 180
           PCDL+TGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGIC
Sbjct: 123 PCDLITGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGIC 182

Query: 181 ADELHLCGDAAVVPLIQEILKVTGDDIEVQYNERLSPLIPMKVPLGSYSNIRTGDCIVTF 240
           ADELHLCGDAAVVPLIQEILKVTGDDI+VQY ERLSPLIPMKVPLG YSNIR GDCIVTF
Sbjct: 183 ADELHLCGDAAVVPLIQEILKVTGDDIKVQYYERLSPLIPMKVPLGPYSNIRKGDCIVTF 242

Query: 241 SRPKIYGYKRKIEGEGRHLCSVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLN 300
           SR KIY YKRKIE EG  LCSVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLN
Sbjct: 243 SRRKIYAYKRKIESEGGQLCSVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLN 302

Query: 301 LNISRIIFSTMEKFDGFEMRELTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSS 360
           LNISRIIFSTMEKFDGFEMR+LTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSS
Sbjct: 303 LNISRIIFSTMEKFDGFEMRDLTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSS 362

Query: 361 LKSASPTIERAGLFPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKV 420
           LKSASPTIERAG+FPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKV
Sbjct: 363 LKSASPTIERAGIFPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKV 422

Query: 421 AAVLDEMPLSLHDKYLFCISPVDMADDITSQGLTQFAQNYANRGIVRLREIFTAGTLQVP 480
           AAVLDEMPLSLHDKYLFCISPVDMAD+ITSQGLTQFA  YAN+GIVRLREIFTAGTLQVP
Sbjct: 423 AAVLDEMPLSLHDKYLFCISPVDMADEITSQGLTQFATKYANKGIVRLREIFTAGTLQVP 482

Query: 481 ETQAALKELESIHKVLDLYVWLSFRLDESFPDRELAVSQKSVCSMLIEEFLGRLGWQRPR 540
           ETQAALKELES+HKVLDLYVWLSFRL+ESFPDRELAVSQKSVCSMLIEEFLGRLGWQRPR
Sbjct: 483 ETQAALKELESVHKVLDLYVWLSFRLEESFPDRELAVSQKSVCSMLIEEFLGRLGWQRPR 542

Query: 541 TRQLKSNIHSRSLLSSGVKRRL 563
           TRQLKS+I SRSLLSSGVKRRL
Sbjct: 543 TRQLKSSIRSRSLLSSGVKRRL 564

[Close]

BLAST of Tan0003248 vs. ExPASy TrEMBL
Match: A0A6J1IWJ9 (RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111479223 PE=4 SV=1)

HSP 1 Score: 1083.6 bits (2801), Expect = 0.0e+00
Identity = 533/562 (94.84%), Postives = 544/562 (96.80%), Query Frame = 0


Query: 1   MASMHFYRKLFSPATYSALPGFVGALNRDFHLNFGPSCCRRYSIYSSTHKFDFTDLTRPH 60
           MASM+F R LFSPA YSALPGFVGA+N++F L FGPSCCR YSIYSSTHKFDFTDLTRPH
Sbjct: 3   MASMYFCRMLFSPAGYSALPGFVGAVNQEFQLKFGPSCCRLYSIYSSTHKFDFTDLTRPH 62

Query: 61  SWYPNARSKRRKIFLHMGPTNSGKTHNALKRLESSDSGIYCGPLRLLAWEVAKRLNKAKI 120
           SWYPNAR K RKIFLHMGPTNSGKTHNALKRLESSDSG+YCGPLRLLAWEV+KRLNKAKI
Sbjct: 63  SWYPNARRKHRKIFLHMGPTNSGKTHNALKRLESSDSGLYCGPLRLLAWEVSKRLNKAKI 122

Query: 121 PCDLVTGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGIC 180
           PCDL+TGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGIC
Sbjct: 123 PCDLITGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGIC 182

Query: 181 ADELHLCGDAAVVPLIQEILKVTGDDIEVQYNERLSPLIPMKVPLGSYSNIRTGDCIVTF 240
           ADELHLCGDAAVVPLIQEILKVTGDDIEVQY ERLSPLIPMKVPLG YSNIR GDCIVTF
Sbjct: 183 ADELHLCGDAAVVPLIQEILKVTGDDIEVQYYERLSPLIPMKVPLGPYSNIRKGDCIVTF 242

Query: 241 SRPKIYGYKRKIEGEGRHLCSVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLN 300
           SR KIY YKRKIE EG HLCSVVYGSLPPETRTRQATMFNDT SEFDVLVASDAIGMGLN
Sbjct: 243 SRRKIYAYKRKIESEGGHLCSVVYGSLPPETRTRQATMFNDTASEFDVLVASDAIGMGLN 302

Query: 301 LNISRIIFSTMEKFDGFEMRELTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSS 360
           LNISRIIFSTMEKFDGFEMRELTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSS
Sbjct: 303 LNISRIIFSTMEKFDGFEMRELTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSS 362

Query: 361 LKSASPTIERAGLFPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKV 420
           LKSASPTIERAGLFPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKV
Sbjct: 363 LKSASPTIERAGLFPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKV 422

Query: 421 AAVLDEMPLSLHDKYLFCISPVDMADDITSQGLTQFAQNYANRGIVRLREIFTAGTLQVP 480
           AAVLDEMPLSLHDKYLFCISPVDMAD+ITSQGLTQFA  YAN+GIVRLREIFTAGTLQVP
Sbjct: 423 AAVLDEMPLSLHDKYLFCISPVDMADEITSQGLTQFATKYANKGIVRLREIFTAGTLQVP 482

Query: 481 ETQAALKELESIHKVLDLYVWLSFRLDESFPDRELAVSQKSVCSMLIEEFLGRLGWQRPR 540
           ETQAALKELES+HKVLDLYVWLSFRL+ESFPDRELAVSQKSVCSMLIEEFLGRLGWQRPR
Sbjct: 483 ETQAALKELESVHKVLDLYVWLSFRLEESFPDRELAVSQKSVCSMLIEEFLGRLGWQRPR 542

Query: 541 TRQLKSNIHSRSLLSSGVKRRL 563
           TRQLKSNIHSRSLLSSGVKRRL
Sbjct: 543 TRQLKSNIHSRSLLSSGVKRRL 564

[Close]

BLAST of Tan0003248 vs. ExPASy TrEMBL
Match: A0A6J1GV03 (RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111457680 PE=4 SV=1)

HSP 1 Score: 1075.1 bits (2779), Expect = 0.0e+00
Identity = 528/562 (93.95%), Postives = 543/562 (96.62%), Query Frame = 0


Query: 1   MASMHFYRKLFSPATYSALPGFVGALNRDFHLNFGPSCCRRYSIYSSTHKFDFTDLTRPH 60
           MASM+F R LFSPA YSALPGFVGA+N++F L FGPSCCR YSIYSSTHKFDFTDLTRPH
Sbjct: 3   MASMYFCRMLFSPAGYSALPGFVGAVNQEFQLKFGPSCCRLYSIYSSTHKFDFTDLTRPH 62

Query: 61  SWYPNARSKRRKIFLHMGPTNSGKTHNALKRLESSDSGIYCGPLRLLAWEVAKRLNKAKI 120
           SWYPNAR K RKIFLHMGPTNSGKTHNALKRLESSDSG+YCGPLRLLAWEV+KRLNKAKI
Sbjct: 63  SWYPNARRKHRKIFLHMGPTNSGKTHNALKRLESSDSGLYCGPLRLLAWEVSKRLNKAKI 122

Query: 121 PCDLVTGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGIC 180
           PCDL+TGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGIC
Sbjct: 123 PCDLITGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGIC 182

Query: 181 ADELHLCGDAAVVPLIQEILKVTGDDIEVQYNERLSPLIPMKVPLGSYSNIRTGDCIVTF 240
           ADELHLCGDAAVVPLIQEILKVTGDDIEVQY ERLSPLIPMKVPLG YSNIR GDCIVTF
Sbjct: 183 ADELHLCGDAAVVPLIQEILKVTGDDIEVQYYERLSPLIPMKVPLGPYSNIRKGDCIVTF 242

Query: 241 SRPKIYGYKRKIEGEGRHLCSVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLN 300
           SR KIY YKRKIE EG  LCSVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLN
Sbjct: 243 SRRKIYAYKRKIESEGGQLCSVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLN 302

Query: 301 LNISRIIFSTMEKFDGFEMRELTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSS 360
           LNISRIIFSTMEKFDGFEMR+LTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSS
Sbjct: 303 LNISRIIFSTMEKFDGFEMRDLTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSS 362

Query: 361 LKSASPTIERAGLFPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKV 420
           LKSASPTIERAG+FPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKV
Sbjct: 363 LKSASPTIERAGIFPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKV 422

Query: 421 AAVLDEMPLSLHDKYLFCISPVDMADDITSQGLTQFAQNYANRGIVRLREIFTAGTLQVP 480
           AAVLDEMPLSLHDKYLFCISPVDMAD+ITSQGLTQFA  YAN+G+VRLREIFTAGTLQVP
Sbjct: 423 AAVLDEMPLSLHDKYLFCISPVDMADEITSQGLTQFATKYANKGVVRLREIFTAGTLQVP 482

Query: 481 ETQAALKELESIHKVLDLYVWLSFRLDESFPDRELAVSQKSVCSMLIEEFLGRLGWQRPR 540
           ETQAALKELES+HKVLDLYVWLSFRL+ESFPDRELAVSQKSVCSMLIEEFLGRLGWQRPR
Sbjct: 483 ETQAALKELESVHKVLDLYVWLSFRLEESFPDRELAVSQKSVCSMLIEEFLGRLGWQRPR 542

Query: 541 TRQLKSNIHSRSLLSSGVKRRL 563
           TRQLKS+I SRSLLSSGVKRRL
Sbjct: 543 TRQLKSSIRSRSLLSSGVKRRL 564

[Close]

BLAST of Tan0003248 vs. ExPASy TrEMBL
Match: A0A6J1CBQ8 (RNA helicase OS=Momordica charantia OX=3673 GN=LOC111009233 PE=4 SV=1)

HSP 1 Score: 1064.3 bits (2751), Expect = 1.7e-307
Identity = 523/562 (93.06%), Postives = 540/562 (96.09%), Query Frame = 0


Query: 1   MASMHFYRKLFSPATYSALPGFVGALNRDFHLNFGPSCCRRYSIYSSTHKFDFTDLTRPH 60
           MASMHF RKLFSPA  S L GFVGAL++DF LNFGP  CR+YSIYSS  KFDFTDLTRPH
Sbjct: 1   MASMHFCRKLFSPAGSSVLSGFVGALSKDFKLNFGPFGCRQYSIYSSADKFDFTDLTRPH 60

Query: 61  SWYPNARSKRRKIFLHMGPTNSGKTHNALKRLESSDSGIYCGPLRLLAWEVAKRLNKAKI 120
           SWYPNAR K RKIFLHMGPTNSGKTHNALKRLESS SGIYCGPLRLLAWEVAKRLNKAKI
Sbjct: 61  SWYPNARRKHRKIFLHMGPTNSGKTHNALKRLESSGSGIYCGPLRLLAWEVAKRLNKAKI 120

Query: 121 PCDLVTGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGIC 180
           PCDL+TGQE+EEVDGAKH+AVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGIC
Sbjct: 121 PCDLITGQEKEEVDGAKHRAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGIC 180

Query: 181 ADELHLCGDAAVVPLIQEILKVTGDDIEVQYNERLSPLIPMKVPLGSYSNIRTGDCIVTF 240
           ADELHLCGDAAVVPLIQEILKVTGDDIEVQY ERLSPLIPMKVPLG YSNIRTGDC+VTF
Sbjct: 181 ADELHLCGDAAVVPLIQEILKVTGDDIEVQYYERLSPLIPMKVPLGPYSNIRTGDCVVTF 240

Query: 241 SRPKIYGYKRKIEGEGRHLCSVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLN 300
           SR KIYGYK+KIE + RHLCSVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLN
Sbjct: 241 SRRKIYGYKKKIESDSRHLCSVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLN 300

Query: 301 LNISRIIFSTMEKFDGFEMRELTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSS 360
           LNISRIIFSTMEKFDGFEMRELT+PEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSS
Sbjct: 301 LNISRIIFSTMEKFDGFEMRELTIPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSS 360

Query: 361 LKSASPTIERAGLFPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKV 420
           LKSASPTIERAGLFPTFELMYLYSRLHPENGLRQILEHFV+NAKLSENYFI+DCEEMLKV
Sbjct: 361 LKSASPTIERAGLFPTFELMYLYSRLHPENGLRQILEHFVDNAKLSENYFISDCEEMLKV 420

Query: 421 AAVLDEMPLSLHDKYLFCISPVDMADDITSQGLTQFAQNYANRGIVRLREIFTAGTLQVP 480
           AAVLDEMPLSLHDKYLFCISPVDMADDITSQGLTQFAQNYAN+GIVRLREIFTAGTLQVP
Sbjct: 421 AAVLDEMPLSLHDKYLFCISPVDMADDITSQGLTQFAQNYANKGIVRLREIFTAGTLQVP 480

Query: 481 ETQAALKELESIHKVLDLYVWLSFRLDESFPDRELAVSQKSVCSMLIEEFLGRLGWQRPR 540
           +TQAALKELESIHKVLDLYVWLSFRL+ESFPDRELA +QKSVCSMLIEEFLGR+GWQRPR
Sbjct: 481 QTQAALKELESIHKVLDLYVWLSFRLEESFPDRELAAAQKSVCSMLIEEFLGRIGWQRPR 540

Query: 541 TRQLKSNIHSRSLLSSGVKRRL 563
           TRQLKSNI SRSLLSS VKR L
Sbjct: 541 TRQLKSNIRSRSLLSSSVKRYL 562

[Close]

BLAST of Tan0003248 vs. ExPASy TrEMBL
Match: A0A6J1C9P2 (RNA helicase OS=Momordica charantia OX=3673 GN=LOC111009233 PE=4 SV=1)

HSP 1 Score: 1038.1 bits (2683), Expect = 1.3e-299
Identity = 508/542 (93.73%), Postives = 525/542 (96.86%), Query Frame = 0


Query: 21  GFVGALNRDFHLNFGPSCCRRYSIYSSTHKFDFTDLTRPHSWYPNARSKRRKIFLHMGPT 80
           GFVGAL++DF LNFGP  CR+YSIYSS  KFDFTDLTRPHSWYPNAR K RKIFLHMGPT
Sbjct: 30  GFVGALSKDFKLNFGPFGCRQYSIYSSADKFDFTDLTRPHSWYPNARRKHRKIFLHMGPT 89

Query: 81  NSGKTHNALKRLESSDSGIYCGPLRLLAWEVAKRLNKAKIPCDLVTGQEREEVDGAKHKA 140
           NSGKTHNALKRLESS SGIYCGPLRLLAWEVAKRLNKAKIPCDL+TGQE+EEVDGAKH+A
Sbjct: 90  NSGKTHNALKRLESSGSGIYCGPLRLLAWEVAKRLNKAKIPCDLITGQEKEEVDGAKHRA 149

Query: 141 VTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGICADELHLCGDAAVVPLIQEIL 200
           VTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGICADELHLCGDAAVVPLIQEIL
Sbjct: 150 VTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGICADELHLCGDAAVVPLIQEIL 209

Query: 201 KVTGDDIEVQYNERLSPLIPMKVPLGSYSNIRTGDCIVTFSRPKIYGYKRKIEGEGRHLC 260
           KVTGDDIEVQY ERLSPLIPMKVPLG YSNIRTGDC+VTFSR KIYGYK+KIE + RHLC
Sbjct: 210 KVTGDDIEVQYYERLSPLIPMKVPLGPYSNIRTGDCVVTFSRRKIYGYKKKIESDSRHLC 269

Query: 261 SVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLNLNISRIIFSTMEKFDGFEMR 320
           SVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLNLNISRIIFSTMEKFDGFEMR
Sbjct: 270 SVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLNLNISRIIFSTMEKFDGFEMR 329

Query: 321 ELTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSSLKSASPTIERAGLFPTFELM 380
           ELT+PEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSSLKSASPTIERAGLFPTFELM
Sbjct: 330 ELTIPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSSLKSASPTIERAGLFPTFELM 389

Query: 381 YLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKVAAVLDEMPLSLHDKYLFCIS 440
           YLYSRLHPENGLRQILEHFV+NAKLSENYFI+DCEEMLKVAAVLDEMPLSLHDKYLFCIS
Sbjct: 390 YLYSRLHPENGLRQILEHFVDNAKLSENYFISDCEEMLKVAAVLDEMPLSLHDKYLFCIS 449

Query: 441 PVDMADDITSQGLTQFAQNYANRGIVRLREIFTAGTLQVPETQAALKELESIHKVLDLYV 500
           PVDMADDITSQGLTQFAQNYAN+GIVRLREIFTAGTLQVP+TQAALKELESIHKVLDLYV
Sbjct: 450 PVDMADDITSQGLTQFAQNYANKGIVRLREIFTAGTLQVPQTQAALKELESIHKVLDLYV 509

Query: 501 WLSFRLDESFPDRELAVSQKSVCSMLIEEFLGRLGWQRPRTRQLKSNIHSRSLLSSGVKR 560
           WLSFRL+ESFPDRELA +QKSVCSMLIEEFLGR+GWQRPRTRQLKSNI SRSLLSS VKR
Sbjct: 510 WLSFRLEESFPDRELAAAQKSVCSMLIEEFLGRIGWQRPRTRQLKSNIRSRSLLSSSVKR 569

Query: 561 RL 563
            L
Sbjct: 570 YL 571

[Close]

BLAST of Tan0003248 vs. ExPASy TrEMBL
Match: A0A0A0L5G1 (RNA helicase OS=Cucumis sativus OX=3659 GN=Csa_3G146440 PE=4 SV=1)

HSP 1 Score: 987.6 bits (2552), Expect = 2.1e-284
Identity = 492/562 (87.54%), Postives = 513/562 (91.28%), Query Frame = 0


Query: 4   MHFYRKLFSPATYSALPGFVGALNRDFHLNFGPSCCRRYSIYSSTHKFDFTDLTRPHSWY 63
           M + R LFSP  +SALPGFVGALNRDF L F PSCCR YSI  S   FDFTDLT PHSWY
Sbjct: 1   MQYCRLLFSPGGFSALPGFVGALNRDFQLRFKPSCCRLYSI--SRSNFDFTDLTCPHSWY 60

Query: 64  PNARSKRRKIFLHMGPTNSGKTHNALKRLESSDSGIYCGPLRLLAWEVAKRLNKAKIPCD 123
           PNAR K RKIFLHMGPTNSGKTHNALKRLESSDSG+YCGPLRLLAWEVAKRLN AKIPCD
Sbjct: 61  PNARKKHRKIFLHMGPTNSGKTHNALKRLESSDSGVYCGPLRLLAWEVAKRLNNAKIPCD 120

Query: 124 LVTGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGICADE 183
           L+TGQEREEVDGAKHKAVTVEMADVTS+YSCAVIDEIQMLGCKTRGYSFTRALLG+CADE
Sbjct: 121 LITGQEREEVDGAKHKAVTVEMADVTSSYSCAVIDEIQMLGCKTRGYSFTRALLGLCADE 180

Query: 184 LHLCGDAAVVPLIQEILKVTGDDIEVQYNERLSPLIPMKVPLGSYSNIRTGDCIVTFSRP 243
           +HLCGDAAVVPLIQEILKVTGDDIEVQY ERLSPLIP+ +PLGSYSNIR GDCIVTFSR 
Sbjct: 181 IHLCGDAAVVPLIQEILKVTGDDIEVQYYERLSPLIPLNIPLGSYSNIRKGDCIVTFSRR 240

Query: 244 KIYGYKRKIEGEGRHLCSVVYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLNLNI 303
           +IYGYK++IE +G HLCS+VYGSLPPETRTRQA MFNDTTSEFDVLVASDAIGMGLNLNI
Sbjct: 241 RIYGYKKEIERQGGHLCSIVYGSLPPETRTRQAMMFNDTTSEFDVLVASDAIGMGLNLNI 300

Query: 304 SRIIFSTMEKFDGFEMRELTVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSSLKS 363
           SRIIFSTMEKFDGFEMRELTVPEIKQIAGRAGRYGSKFPIGEVTCI+GDDLPLLHSSLKS
Sbjct: 301 SRIIFSTMEKFDGFEMRELTVPEIKQIAGRAGRYGSKFPIGEVTCISGDDLPLLHSSLKS 360

Query: 364 ASPTIERAGLFPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKVAAV 423
           ASPTIERAGLFPTFELMYLYSRLHPE+GLRQILEHFVENAKLSENYFI DCE MLKVAAV
Sbjct: 361 ASPTIERAGLFPTFELMYLYSRLHPEHGLRQILEHFVENAKLSENYFIVDCEVMLKVAAV 420

Query: 424 LDEMPLSLHDKYLFCISPVDMADDITSQGLTQFAQNYANRGIVRLREIFTAGTLQVPETQ 483
           LDEMPLSLHDKYLFCISP DM D+ITSQGLTQF Q YAN+GIVRLREIF  GTL+VPET 
Sbjct: 421 LDEMPLSLHDKYLFCISPADMDDEITSQGLTQFVQGYANKGIVRLREIFKEGTLKVPETP 480

Query: 484 AALKELESIHKVLDLYVWLSFRLDESFPDRELAVSQKSVCSMLIEEFLGRLGWQRPRTRQ 543
           AALKELESIHKVLDLYVWLSFRL+ESFPDRE A SQKS CSMLIEEFLGR G Q P  R+
Sbjct: 481 AALKELESIHKVLDLYVWLSFRLEESFPDRERADSQKSFCSMLIEEFLGRSGMQIPTRRK 540

Query: 544 LKSNIHSR---SLLSSGVKRRL 563
           LKSNI SR   SLLS   KRRL
Sbjct: 541 LKSNIRSRSLNSLLSVVAKRRL 560

[Close]

BLAST of Tan0003248 vs. TAIR 10
Match: AT4G14790.1 (ATP-dependent RNA helicase, mitochondrial (SUV3) )

HSP 1 Score: 755.0 bits (1948), Expect = 4.4e-218
Identity = 361/509 (70.92%), Postives = 434/509 (85.27%), Query Frame = 0


Query: 23  VGALNRDFHLNFGPSCCRRYSIYSSTHKFDFTDLTRPHSWYPNARSKRRKIFLHMGPTNS 82
           +G L R++  N G S    ++   +T KFDFTDLT PH+WYP AR K+RK+ LH+GPTNS
Sbjct: 42  LGVLTRNYRKNSG-SPKFDFTGTGTTSKFDFTDLTCPHTWYPIARKKKRKVILHVGPTNS 101

Query: 83  GKTHNALKRLESSDSGIYCGPLRLLAWEVAKRLNKAKIPCDLVTGQEREEVDGAKHKAVT 142
           GKT++ALK LE S SG+YCGPLRLLAWEVAKRLNKA +PCDL+TGQE++ V+GA HKAVT
Sbjct: 102 GKTYSALKHLEQSSSGVYCGPLRLLAWEVAKRLNKANVPCDLITGQEKDLVEGATHKAVT 161

Query: 143 VEMADVTSNYSCAVIDEIQMLGCKTRGYSFTRALLGICADELHLCGDAAVVPLIQEILKV 202
           VEMADVTS Y CA+IDEIQM+GCK RG++FTRALLGI ADELHLCGD AVVPL+++ILKV
Sbjct: 162 VEMADVTSVYDCAIIDEIQMVGCKQRGFAFTRALLGIAADELHLCGDPAVVPLVEDILKV 221

Query: 203 TGDDIEVQYNERLSPLIPMKVPLGSYSNIRTGDCIVTFSRPKIYGYKRKIEGEGRHLCSV 262
           TGDD+EV   ERLSPL+P+KVP+ S S+I+TGDC+VTFSR  IY YK+ IE  G+HLCSV
Sbjct: 222 TGDDVEVHTYERLSPLVPLKVPVSSVSSIKTGDCLVTFSRKDIYAYKKTIERAGKHLCSV 281

Query: 263 VYGSLPPETRTRQATMFNDTTSEFDVLVASDAIGMGLNLNISRIIFSTMEKFDGFEMREL 322
           VYGSLPPETRT QAT FND T++FDVLVASDAIGMGLNLNISRIIFST++K+DG E R+L
Sbjct: 282 VYGSLPPETRTAQATRFNDETNDFDVLVASDAIGMGLNLNISRIIFSTLQKYDGSETRDL 341

Query: 323 TVPEIKQIAGRAGRYGSKFPIGEVTCINGDDLPLLHSSLKSASPTIERAGLFPTFELMYL 382
           TV EIKQIAGRAGR+ SKFPIGEVTC++ +DLPLLHSSLKS SP +ERAGLFPTF+L+  
Sbjct: 342 TVSEIKQIAGRAGRFQSKFPIGEVTCLHKEDLPLLHSSLKSPSPILERAGLFPTFDLLSG 401

Query: 383 YSRLHPENGLRQILEHFVENAKLSENYFIADCEEMLKVAAVLDEMPLSLHDKYLFCISPV 442
           YS+ HP +GL QILEHFVENAKLS NYFI++ E+M+KVAA++DE+PL L +KYLF +SPV
Sbjct: 402 YSQAHPTHGLYQILEHFVENAKLSSNYFISNVEDMMKVAAIVDELPLGLQEKYLFVVSPV 461

Query: 443 DMADDITSQGLTQFAQNYANRGIVRLREIFTAGTLQVPETQAALKELESIHKVLDLYVWL 502
           D+ D+I+ QGL QFAQN++  GIVRLREI     ++VP+T   LKELESIHKVLDLYVWL
Sbjct: 462 DVNDEISGQGLAQFAQNFSKAGIVRLREILAPDRVKVPKTPTELKELESIHKVLDLYVWL 521

Query: 503 SFRLDESFPDRELAVSQKSVCSMLIEEFL 532
           S RL++SFPDRE+A SQKS+C++LIE+FL
Sbjct: 522 SLRLEDSFPDREVAASQKSICNLLIEQFL 549

[Close]

BLAST of Tan0003248 vs. TAIR 10
Match: AT5G39840.1 (ATP-dependent RNA helicase, mitochondrial, putative )

HSP 1 Score: 409.8 bits (1052), Expect = 3.4e-114
Identity = 203/488 (41.60%), Postives = 315/488 (64.55%), Query Frame = 0


Query: 52  DFTDLTRPHSWYPNARSKRRKIFLHMGPTNSGKTHNALKRLESSDSGIYCGPLRLLAWEV 111
           D  DLT+P +W+P AR+ +RKI  H GPTNSGKT+NAL+R   + +G+YC PLRLLA EV
Sbjct: 255 DTADLTKPATWFPFARAMKRKIVYHCGPTNSGKTYNALQRFMEAKNGLYCSPLRLLAMEV 314

Query: 112 AKRLNKAKIPCDLVTGQEREEVDGAKHKAVTVEMADVTSNYSCAVIDEIQMLGCKTRGYS 171
             ++N   I C L+TGQE++ V  A H + TVEM      Y  AV+DEIQM+   +RG++
Sbjct: 315 FDKVNALGIYCSLLTGQEKKYVPFANHVSCTVEMVSTDELYEVAVLDEIQMMADPSRGHA 374

Query: 172 FTRALLGICADELHLCGDAAVVPLIQEILKVTGDDIEVQYNERLSPL-IPMKVPLGSYSN 231
           +T+ALLG+ ADE+HLCGD +V+ +++++   TGD++  ++ ER  PL +  K  LG   N
Sbjct: 375 WTKALLGLKADEIHLCGDPSVLDIVRKMCADTGDELVEEHYERFKPLVVEAKTLLGELKN 434

Query: 232 IRTGDCIVTFSRPKIYGYKRKIEGEGRHLCSVVYGSLPPETRTRQATMFNDTTSEFDVLV 291
           +++GDC+V FSR +I+  K  IE    H C V+YG+LPPETR +QA +FND  +E+DVLV
Sbjct: 435 VKSGDCVVAFSRREIFEVKMAIEKHTNHRCCVIYGALPPETRRQQAKLFNDQENEYDVLV 494

Query: 292 ASDAIGMGLNLNISRIIFSTMEKFDGFEMRELTVPEIKQIAGRAGRYGSKFPIGEVTCIN 351
           ASDA+GMGLNLNI R++F ++ K++G ++  +   ++KQIAGRAGR GS++P G  T ++
Sbjct: 495 ASDAVGMGLNLNIRRVVFYSLNKYNGDKIVPVAASQVKQIAGRAGRRGSRYPDGLTTTLH 554

Query: 352 GDDLPLLHSSLKSASPTIERAGLFPTFELMYLYSRLHPENGLRQILEHFVENAKLSENYF 411
            +DL  L   L+     + + GLFP FE + L++   P+     +LEHF ++ +L  +YF
Sbjct: 555 LEDLNYLIECLQQPFDEVTKVGLFPFFEQIELFAAQVPDMAFSNLLEHFGKHCRLDGSYF 614

Query: 412 IADCEEMLKVAAVLDEMP-LSLHDKYLFCISPVDMADDITSQGLTQFAQNYANRGIVRLR 471
           +   + + KVA +L+++  LSL D++ FC +PV++ +      L +FA +Y+    V + 
Sbjct: 615 LCRHDHVKKVANMLEKVEGLSLEDRFNFCFAPVNIRNPRAMHNLYRFASSYSQNMPVNVA 674

Query: 472 EIFTAGTLQVPETQAALKELESIHKVLDLYVWLSFRLDESFPDRELAVSQKSVCSMLIEE 531
                 +    ++ A L +LES H++L +Y+WLS + +E+FP  E   +  +  + L+ E
Sbjct: 675 MGIPKSS---AKSDAQLLDLESRHQILSMYLWLSNQFEENFPFVEKVEAMATNIAELLGE 734

Query: 532 FLGRLGWQ 538
            L +  W+
Sbjct: 735 SLSKASWK 739

[Close]

BLAST of Tan0003248 vs. TAIR 10
Match: AT3G46960.1 (RNA helicase, ATP-dependent, SK12/DOB1 protein )

HSP 1 Score: 50.1 bits (118), Expect = 6.9e-06
Identity = 26/68 (38.24%), Postives = 38/68 (55.88%), Query Frame = 0


Query: 288 VLVASDAIGMGLNLNISRIIFSTMEKFDGFEMRELTVPEIKQIAGRAGRYGSKFPIGEVT 347
           VL +++   MG+N     ++F  + KFDG E R+L   E  Q+AGRAGR G     G V 
Sbjct: 741 VLFSTETFAMGVNAPARTVVFDALRKFDGKEFRQLLPGEYTQMAGRAGRRGLD-KTGTVV 800

Query: 348 CINGDDLP 356
            +  D++P
Sbjct: 801 VMCRDEVP 807

[Close]

BLAST of Tan0003248 vs. TAIR 10
Match: AT1G59760.1 (RNA helicase, ATP-dependent, SK12/DOB1 protein )

HSP 1 Score: 44.3 bits (103), Expect = 3.8e-04
Identity = 20/50 (40.00%), Postives = 32/50 (64.00%), Query Frame = 0


Query: 289 LVASDAIGMGLNLNISRIIFSTMEKFDGFEMRELTVPEIKQIAGRAGRYG 339
           L A++   +GLN+    ++F+ + KFDG + R L+  E  Q++GRAGR G
Sbjct: 413 LFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWLSSGEYIQMSGRAGRRG 462

The following BLAST results are available for this feature:

BLAST of Tan0003248 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q10D00	1.5e-223	74.09	ATP-dependent RNA helicase SUV3, mitochondrial OS=Oryza sativa subsp. japonica O...	[more]
Q9SMX1	6.1e-217	70.92	DExH-box ATP-dependent RNA helicase DExH16, mitochondrial OS=Arabidopsis thalian...	[more]
Q01IJ3	1.2e-114	43.90	ATP-dependent RNA helicase SUV3L, mitochondrial OS=Oryza sativa subsp. indica OX...	[more]
Q7X745	1.2e-114	43.90	ATP-dependent RNA helicase SUV3L, mitochondrial OS=Oryza sativa subsp. japonica ...	[more]
F4KFV7	4.8e-113	41.60	DExH-box ATP-dependent RNA helicase DExH18, mitochondrial OS=Arabidopsis thalian...	[more]

BLAST of Tan0003248 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022979543.1	0.0e+00	94.84	ATP-dependent RNA helicase SUV3, mitochondrial isoform X1 [Cucurbita maxima]	[more]
XP_023527154.1	0.0e+00	93.95	ATP-dependent RNA helicase SUV3, mitochondrial isoform X1 [Cucurbita pepo subsp....	[more]
XP_022955798.1	0.0e+00	93.95	ATP-dependent RNA helicase SUV3, mitochondrial isoform X1 [Cucurbita moschata]	[more]
KAG7018725.1	1.7e-309	93.59	ATP-dependent RNA helicase SUV3, mitochondrial [Cucurbita argyrosperma subsp. ar...	[more]
KAG6582314.1	3.0e-309	93.59	ATP-dependent RNA helicase SUV3, mitochondrial, partial [Cucurbita argyrosperma ...	[more]

BLAST of Tan0003248 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IWJ9	0.0e+00	94.84	RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111479223 PE=4 SV=1	[more]
A0A6J1GV03	0.0e+00	93.95	RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111457680 PE=4 SV=1	[more]
A0A6J1CBQ8	1.7e-307	93.06	RNA helicase OS=Momordica charantia OX=3673 GN=LOC111009233 PE=4 SV=1	[more]
A0A6J1C9P2	1.3e-299	93.73	RNA helicase OS=Momordica charantia OX=3673 GN=LOC111009233 PE=4 SV=1	[more]
A0A0A0L5G1	2.1e-284	87.54	RNA helicase OS=Cucumis sativus OX=3659 GN=Csa_3G146440 PE=4 SV=1	[more]

BLAST of Tan0003248 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14790.1	4.4e-218	70.92	ATP-dependent RNA helicase, mitochondrial (SUV3)	[more]
AT5G39840.1	3.4e-114	41.60	ATP-dependent RNA helicase, mitochondrial, putative	[more]
AT3G46960.1	6.9e-06	38.24	RNA helicase, ATP-dependent, SK12/DOB1 protein	[more]
AT1G59760.1	3.8e-04	40.00	RNA helicase, ATP-dependent, SK12/DOB1 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 250..338 e-value: 1.6E-12 score: 57.6
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 257..338 e-value: 1.0E-8 score: 35.5
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 194..381 score: 9.851648
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 59..213 e-value: 1.6E-155 score: 519.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 214..365 e-value: 1.6E-155 score: 519.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 69..340
None	No IPR available	GENE3D	1.20.58.1080		coord: 440..548 e-value: 3.6E-22 score: 80.2
None	No IPR available	GENE3D	1.20.272.40		coord: 53..438 e-value: 1.6E-155 score: 519.6
None	No IPR available	PANTHER	PTHR12131:SF1	ATP-DEPENDENT RNA HELICASE SUPV3L1, MITOCHONDRIAL	coord: 45..542
None	No IPR available	PANTHER	PTHR12131	ATP-DEPENDENT RNA AND DNA HELICASE	coord: 45..542
None	No IPR available	CDD	cd18805	SF2_C_suv3	coord: 216..348 e-value: 4.77887E-74 score: 229.753
IPR041082	Suv3, C-terminal domain 1	PFAM	PF18147	Suv3_C_1	coord: 420..461 e-value: 4.0E-10 score: 39.5
IPR022192	Mitochondrial degradasome RNA helicase subunit, C-terminal domain	PFAM	PF12513	SUV3_C	coord: 486..531 e-value: 1.0E-16 score: 60.5
IPR044774	Suv3, DEXQ-box helicase domain	CDD	cd17913	DEXQc_Suv3	coord: 71..211 e-value: 7.04134E-83 score: 252.864

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0003248.1	Tan0003248.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032508	DNA duplex unwinding
biological_process	GO:0000965	mitochondrial RNA 3'-end processing
biological_process	GO:0010929	positive regulation of auxin mediated signaling pathway
biological_process	GO:0080038	positive regulation of cytokinin-activated signaling pathway
biological_process	GO:0009939	positive regulation of gibberellic acid mediated signaling pathway
biological_process	GO:1901002	positive regulation of response to salt stress
biological_process	GO:1902584	positive regulation of response to water deprivation
biological_process	GO:0006401	RNA catabolic process
cellular_component	GO:0045025	mitochondrial degradosome
cellular_component	GO:0042645	mitochondrial nucleoid
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003678	DNA helicase activity
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0016817	hydrolase activity, acting on acid anhydrides