Tan0003117 (gene) Snake gourd v1

Overview


Name	Tan0003117
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	transcription factor bHLH130-like isoform X2
Location	LG07: 11530539 .. 11532035 (-)
RNA-Seq Expression	Tan0003117
Synteny	Tan0003117

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCTGATATTGAGCAACAACATCACCGGCAAACGAACTCCGGCTTGAGCCGATACCAATCGGCGCCGAGTTCATATTTCACGAGCCTCATCGACCGGAAACTCTGCGAGCAGTTTGTGAGTAGGCCATCGAGCCCGGAGACGGAACGAATTTTTGCTCGATTCATGACAAGTGGAAGTGCCGCTGCAGCTGACCAGAGAACTCTGTATTTAGCGCCGACGGTGAAAAACGAAACAGGGGATGTAAGTCAGGCATCTGGGTTGCATCAAAATCAATGGAAACGGAAACCCCCTTTGCCAAATAAGAGCATTAATTTGGGGATGGAAATGGGCGGCGGTAATTGTAGTGTGATTCGGCAGAGCAGCTCCCCTGCAGAGTTGCTGTGGCAAATCAACGTTGAAAGTGGTAATTAAAATCGTAATCTCATTGGTGTGGCTATATTATATTGTTGTCGTTTGAATATGGTTCGTAGAAGCGTAGAATGTGCTAGTGAAAATGCGACAATTATTTAGCAGGGTTGTCGCTCGACGGCGCAATGTTATTGGAGGATGCGAAGATGTGCGAGAATCAGGTGAATTCTTGTAATCTAAATTTGAAAGGGCTGGTTTTGAATTAGGGAATTTGTTACCTACTTATTGGGTCAAATTTGATTAAACAGTTTATGGAAGGCGGAGATCAGGGCGCTGTGTTGGCTCGTCACTTGAGTTTGCCTTGTTCAAAATCGGGTGGGCTTGTCCAGTTATCAGATTCTGTTCCCTGCAAAATTCGGGCCAAGCGTGGCTGTGCCACTCACCCTAGAAGCATTGCCGAGAGAGTAAGTTTGGTCCTACTAAATCTTTAATGTCATAATTTATTGTGGTTAATCCTTTGAATACAAAATTAAAAGTTTTAAAGATAGTCTTAGAAGATAGTGTGATAAAATAAATGTAATTTTGAAGGTTTTTGAATAAAAAAATACATTATAGGCCTGACACAAGAATTATTAGTATAACACTAGTATTATAATTGAATGGTTGCTAAATTTAGCTTTGATGATTGCATATGATCACTAGGATGGTCTATTATATTTGGGATTTTGTTGATGTTAATTGTAAATTAAATGATGGATTAGGTTAGGCGAACAAGAATAAGCGATCGGATAAGAAAATTACAGGAACTTGTACCCAATATGGATAAGGTAACTAACTATTAATTTGTGTTCTTTGAATTGATTTTGTGAAAATAGTTTTGGATATTGGATTAGGATGTTTGTCTTGTTTATTAAGCAGCAAGCAAACACATCAGAAATGTTGGATTTGGCTATTGAGTACATAAAGGGCCTTCAGAAACAAGTGCAGGTATATGAAGTAAACTTCAACATATATATAAAGGTCACTTGTCTAATTTTGATTAACTTTTATTATTACTTTCTTTCTTCTTTTTTTTTTCAGACACTATCAAATAGTCATGAAAATTGTAGATGCTCAAACAAGCAGCTGCCACAATATAACTAA

mRNA sequence

ATGGAGTCTGATATTGAGCAACAACATCACCGGCAAACGAACTCCGGCTTGAGCCGATACCAATCGGCGCCGAGTTCATATTTCACGAGCCTCATCGACCGGAAACTCTGCGAGCAGTTTGTGAGTAGGCCATCGAGCCCGGAGACGGAACGAATTTTTGCTCGATTCATGACAAGTGGAAGTGCCGCTGCAGCTGACCAGAGAACTCTGTATTTAGCGCCGACGGTGAAAAACGAAACAGGGGATGTAAGTCAGGCATCTGGGTTGCATCAAAATCAATGGAAACGGAAACCCCCTTTGCCAAATAAGAGCATTAATTTGGGGATGGAAATGGGCGGCGGTAATTGTAGTGTGATTCGGCAGAGCAGCTCCCCTGCAGATTTGCCTTGTTCAAAATCGGGTGGGCTTGTCCAGTTATCAGATTCTGTTCCCTGCAAAATTCGGGCCAAGCGTGGCTGTGCCACTCACCCTAGAAGCATTGCCGAGAGAGTTAGGCGAACAAGAATAAGCGATCGGATAAGAAAATTACAGGAACTTGTACCCAATATGGATAAGCAAGCAAACACATCAGAAATGTTGGATTTGGCTATTGAGTACATAAAGGGCCTTCAGAAACAAGTGCAGACACTATCAAATAGTCATGAAAATTGTAGATGCTCAAACAAGCAGCTGCCACAATATAACTAA

Coding sequence (CDS)

ATGGAGTCTGATATTGAGCAACAACATCACCGGCAAACGAACTCCGGCTTGAGCCGATACCAATCGGCGCCGAGTTCATATTTCACGAGCCTCATCGACCGGAAACTCTGCGAGCAGTTTGTGAGTAGGCCATCGAGCCCGGAGACGGAACGAATTTTTGCTCGATTCATGACAAGTGGAAGTGCCGCTGCAGCTGACCAGAGAACTCTGTATTTAGCGCCGACGGTGAAAAACGAAACAGGGGATGTAAGTCAGGCATCTGGGTTGCATCAAAATCAATGGAAACGGAAACCCCCTTTGCCAAATAAGAGCATTAATTTGGGGATGGAAATGGGCGGCGGTAATTGTAGTGTGATTCGGCAGAGCAGCTCCCCTGCAGATTTGCCTTGTTCAAAATCGGGTGGGCTTGTCCAGTTATCAGATTCTGTTCCCTGCAAAATTCGGGCCAAGCGTGGCTGTGCCACTCACCCTAGAAGCATTGCCGAGAGAGTTAGGCGAACAAGAATAAGCGATCGGATAAGAAAATTACAGGAACTTGTACCCAATATGGATAAGCAAGCAAACACATCAGAAATGTTGGATTTGGCTATTGAGTACATAAAGGGCCTTCAGAAACAAGTGCAGACACTATCAAATAGTCATGAAAATTGTAGATGCTCAAACAAGCAGCTGCCACAATATAACTAA

Protein sequence

MESDIEQQHHRQTNSGLSRYQSAPSSYFTSLIDRKLCEQFVSRPSSPETERIFARFMTSGSAAAADQRTLYLAPTVKNETGDVSQASGLHQNQWKRKPPLPNKSINLGMEMGGGNCSVIRQSSSPADLPCSKSGGLVQLSDSVPCKIRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQANTSEMLDLAIEYIKGLQKQVQTLSNSHENCRCSNKQLPQYN

Homology

[Close]

BLAST of Tan0003117 vs. ExPASy Swiss-Prot
Match: Q66GR3 (Transcription factor bHLH130 OS=Arabidopsis thaliana OX=3702 GN=BHLH130 PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.7e-32
Identity = 93/239 (38.91%), Postives = 128/239 (53.56%), Query Frame = 0


Query: 5   IEQQHHRQTNSGLSRYQSAPSSYFTSLIDR------KLCEQFVSRPSSPETERIFARFMT 64
           I   H +   S L R  S+P+  FT+L D+      +    +     SP       R  +
Sbjct: 119 INNHHTKPVESNLLRQSSSPAGMFTNLSDQNGYGSMRNLMNYEEDEESPSNSNGLRRHCS 178

Query: 65  SGSAAAADQRTLYLAPTVKNETG--------------DVSQASGLHQNQWKRKPPLPNKS 124
             S   +    L   P +  ET               ++S      ++  K      N  
Sbjct: 179 LSSRPPSSLGMLSQIPEIAPETNFPYSHWNDPSSFIDNLSSLKREAEDDGKLFLGAQNGE 238

Query: 125 INLGMEMGGGNCSVIRQSSSPADLPCSKSGGLVQLSDSVPCKIRAKRGCATHPRSIAERV 184
               M++   + S+ + SS+ +D+        +QL DSVPCKIRAKRGCATHPRSIAERV
Sbjct: 239 SGNRMQLLSHHLSLPKSSSTASDMVSVDK--YLQLQDSVPCKIRAKRGCATHPRSIAERV 298

Query: 185 RRTRISDRIRKLQELVPNMDKQANTSEMLDLAIEYIKGLQKQVQTLSNSHENCRCSNKQ 224
           RRTRIS+R+RKLQELVPNMDKQ NTS+MLDLA++YIK LQ+Q + L+++  NC+C NK+
Sbjct: 299 RRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRANCKCMNKE 355

[Close]

BLAST of Tan0003117 vs. ExPASy Swiss-Prot
Match: Q9C690 (Transcription factor bHLH122 OS=Arabidopsis thaliana OX=3702 GN=BHLH122 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 6.1e-30
Identity = 118/380 (31.05%), Postives = 152/380 (40.00%), Query Frame = 0


Query: 1   MESDIEQ--------QHHRQTNSGLSRYQSAPSSYFTSLIDRKLCEQFVSRPSSPETERI 60
           MES+ +Q        QH R  NSGL RYQSAPSSYF+S    +  E+F+ RP+SPETERI
Sbjct: 1   MESEFQQHHFLLHDHQHQRPRNSGLIRYQSAPSSYFSSF--GESIEEFLDRPTSPETERI 60

Query: 61  FARFM------------------------------------------------------- 120
            + F+                                                       
Sbjct: 61  LSGFLQTTDTSDNVDSFLHHTFNSDGTEKKPPEVKTEDEDAEIPVTATATAMEVVVSGDG 120

Query: 121 ----------------------------------------TSGSAAAADQRTLYLA---- 180
                                                    +G  ++ D  T Y A    
Sbjct: 121 EISVNPEVSIGYVASVSRNKRPREKDDRTPVNNLARHNSSPAGLFSSIDVETAYAAVMKS 180

Query: 181 ----------PTVKNETGDVSQASGLHQNQWKRKPPLPNKSINLGME--------MGGGN 222
                      T   E   ++  S L     +   P+    +  G           GG N
Sbjct: 181 MGGFGGSNVMSTSNTEASSLTPRSKLLPPTSRAMSPISEVDVKPGFSSRLPPRTLSGGFN 240

[Close]

BLAST of Tan0003117 vs. ExPASy Swiss-Prot
Match: Q9C8P8 (Transcription factor bHLH80 OS=Arabidopsis thaliana OX=3702 GN=BHLH80 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.5e-28
Identity = 59/83 (71.08%), Postives = 72/83 (86.75%), Query Frame = 0


Query: 141 DSVPCKIRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQANTSEMLDLAIEYI 200
           DSVPC++RAKRGCATHPRSIAERVRRTRISDRIR+LQELVPNMDKQ NT++ML+ A+EY+
Sbjct: 175 DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYV 234

Query: 201 KGLQKQVQTLSNSHENCRCSNKQ 224
           K LQ Q+Q L+   + C+C  K+
Sbjct: 235 KALQSQIQELTEQQKRCKCKPKE 257

[Close]

BLAST of Tan0003117 vs. ExPASy Swiss-Prot
Match: Q8H102 (Transcription factor bHLH128 OS=Arabidopsis thaliana OX=3702 GN=BHLH128 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.7e-28
Identity = 65/106 (61.32%), Postives = 79/106 (74.53%), Query Frame = 0


Query: 121 QSSSPADLPCSKSGGLVQL-SDSVPCKIRAKRGCATHPRSIAERVRRTRISDRIRKLQEL 180
           Q S P+D   +     +QL  DSVPCKIRAKRGCATHPRSIAER RRTRIS +++KLQ+L
Sbjct: 256 QYSLPSDTSMNYMDNFMQLPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDL 315

Query: 181 VPNMDKQANTSEMLDLAIEYIKGLQKQVQTLSNSHENCRCSNKQLP 226
           VPNMDKQ + S+MLDLA+++IKGLQ Q+Q L    ENC C   + P
Sbjct: 316 VPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQENCTCGCSEKP 361

[Close]

BLAST of Tan0003117 vs. ExPASy Swiss-Prot
Match: Q9M0R0 (Transcription factor bHLH81 OS=Arabidopsis thaliana OX=3702 GN=BHLH81 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.3e-26
Identity = 58/85 (68.24%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 139 LSDSVPCKIRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQANTSEMLDLAIE 198
           + DSV  ++RAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQ NT++ML+ A+E
Sbjct: 176 MEDSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVE 235

Query: 199 YIKGLQKQVQTLSNSHENCRCSNKQ 224
           Y+K LQ+Q+Q L+   + C C  K+
Sbjct: 236 YVKVLQRQIQELTEEQKRCTCIPKE 260

[Close]

BLAST of Tan0003117 vs. NCBI nr
Match: XP_022148802.1 (transcription factor bHLH130-like isoform X2 [Momordica charantia])

HSP 1 Score: 295.0 bits (754), Expect = 5.4e-76
Identity = 179/292 (61.30%), Postives = 201/292 (68.84%), Query Frame = 0


Query: 1   MESDIEQQ------------HHRQTNSGLSRYQSAPSSYFTSLIDRKLCEQFVSRPSSPE 60
           MESDI+Q+            HHRQTNSGL+RYQSAPSSYFTS++DRKLCEQFVSRPSSPE
Sbjct: 1   MESDIQQKHHRLLHDDQYELHHRQTNSGLTRYQSAPSSYFTSVVDRKLCEQFVSRPSSPE 60

Query: 61  TERIFARFMTSGSAAAADQRTLYLAPTVKNETGDVSQ--------ASGLHQNQWKRKPPL 120
           TERIFA+FMTSGS A   Q+ + + PTVK++  DV Q         S L+QNQW  KPPL
Sbjct: 61  TERIFAQFMTSGSGA---QQIVAVPPTVKSQAEDVIQKQSNMKRYTSVLNQNQW--KPPL 120

Query: 121 PNKSINL------GMEMGGGNCSVIRQSSSPADL-------------------------P 180
           PNKSINL       MEM GGNCS++RQSSSPA L                          
Sbjct: 121 PNKSINLRREDSYSMEM-GGNCSLVRQSSSPAQLLSHINLEIETGFPFENWEDTDTDIIM 180

Query: 181 CSKS---------------GGLVQLSDSVPCKIRAKRGCATHPRSIAERVRRTRISDRIR 227
            SKS                  + LSDSVPCKIRAKRGCATHPRSIAERVRRTRIS+R+R
Sbjct: 181 LSKSQNQHMKARNQGPMLGPAFLHLSDSVPCKIRAKRGCATHPRSIAERVRRTRISERMR 240

[Close]

BLAST of Tan0003117 vs. NCBI nr
Match: XP_022148801.1 (transcription factor bHLH130-like isoform X1 [Momordica charantia])

HSP 1 Score: 294.7 bits (753), Expect = 7.0e-76
Identity = 179/293 (61.09%), Postives = 201/293 (68.60%), Query Frame = 0


Query: 1   MESDIEQQ------------HHRQTNSGLSRYQSAPSSYFTSLIDRKLCEQFVSRPSSPE 60
           MESDI+Q+            HHRQTNSGL+RYQSAPSSYFTS++DRKLCEQFVSRPSSPE
Sbjct: 1   MESDIQQKHHRLLHDDQYELHHRQTNSGLTRYQSAPSSYFTSVVDRKLCEQFVSRPSSPE 60

Query: 61  TERIFARFMTSGSAAAADQRTLYLAPTVKNETGDVSQ--------ASGLHQNQWKRKPPL 120
           TERIFA+FMTSGS A   Q+ + + PTVK++  DV Q         S L+QNQW  KPPL
Sbjct: 61  TERIFAQFMTSGSGA---QQIVAVPPTVKSQAEDVIQKQSNMKRYTSVLNQNQW--KPPL 120

Query: 121 PNKSINL------GMEMGGGNCSVIRQSSSPADL-------------------------- 180
           PNKSINL       MEM GGNCS++RQSSSPA L                          
Sbjct: 121 PNKSINLRREDSYSMEM-GGNCSLVRQSSSPAQLLSHINLEIETAGFPFENWEDTDTDII 180

Query: 181 PCSKS---------------GGLVQLSDSVPCKIRAKRGCATHPRSIAERVRRTRISDRI 227
             SKS                  + LSDSVPCKIRAKRGCATHPRSIAERVRRTRIS+R+
Sbjct: 181 MLSKSQNQHMKARNQGPMLGPAFLHLSDSVPCKIRAKRGCATHPRSIAERVRRTRISERM 240

[Close]

BLAST of Tan0003117 vs. NCBI nr
Match: XP_022148803.1 (transcription factor bHLH122-like isoform X3 [Momordica charantia])

HSP 1 Score: 189.9 bits (481), Expect = 2.4e-44
Identity = 126/239 (52.72%), Postives = 144/239 (60.25%), Query Frame = 0


Query: 1   MESDIEQQ------------HHRQTNSGLSRYQSAPSSYFTSLIDRKLCEQFVSRPSSPE 60
           MESDI+Q+            HHRQTNSGL+RYQSAPSSYFTS++DRKLCEQFVSRPSSPE
Sbjct: 1   MESDIQQKHHRLLHDDQYELHHRQTNSGLTRYQSAPSSYFTSVVDRKLCEQFVSRPSSPE 60

Query: 61  TERIFARFMTSGSAAAADQRTLYLAPTVKNETGDVSQ--------ASGLHQNQWKRKPPL 120
           TERIFA+FMTSGS A   Q+ + + PTVK++  DV Q         S L+QNQW  KPPL
Sbjct: 61  TERIFAQFMTSGSGA---QQIVAVPPTVKSQAEDVIQKQSNMKRYTSVLNQNQW--KPPL 120

Query: 121 PNKSINL------GMEMGGGNCSVIRQSSSPADL-------------------------- 173
           PNKSINL       MEM GGNCS++RQSSSPA L                          
Sbjct: 121 PNKSINLRREDSYSMEM-GGNCSLVRQSSSPAQLLSHINLEIETAGFPFENWEDTDTDII 180

[Close]

BLAST of Tan0003117 vs. NCBI nr
Match: KAF3452571.1 (hypothetical protein FNV43_RR03004 [Rhamnella rubrinervis])

HSP 1 Score: 189.5 bits (480), Expect = 3.2e-44
Identity = 141/395 (35.70%), Postives = 175/395 (44.30%), Query Frame = 0


Query: 1   MESDIEQQHH----------RQTNSGLSRYQSAPSSYFTSLIDRKLCEQFVSRPSSPETE 60
           MESD++Q HH          +Q NSGL RY+SAPSSYFTS +DR+ C+QF +RPSSPETE
Sbjct: 1   MESDLQQHHHLFHDHHHQHQQQMNSGLMRYRSAPSSYFTSAMDREFCDQFFNRPSSPETE 60

Query: 61  RIFARFMTSGSAA--------AADQRTLYLAPTVKNET-------GDVSQASGLHQN--Q 120
           RIFARFM SG  A          +Q+T +  P + NE         +++  S   QN  Q
Sbjct: 61  RIFARFMNSGGGADDTEKGTTQNNQKTQFSTPAMNNEVEVLQQQLSNINNYSSASQNFYQ 120

Query: 121 WKRKPPLPNKSINLGMEM---------------GGGNCSVIRQSSSPA------------ 180
              KPPLPN+S+  G E                G  N ++IR SSSPA            
Sbjct: 121 SSSKPPLPNQSLPSGNERSYSMGMNQIPQMRTGGVNNSNLIRHSSSPAGLFADINTDGYA 180

Query: 181 ------------------------------------------------------------ 224
                                                                       
Sbjct: 181 AAIRGMGNYGATISTKEEPTFSPVAGSMSSIAEIEDKSNIESAAFGDQGRGSNYGTGALP 240

[Close]

BLAST of Tan0003117 vs. NCBI nr
Match: XP_030952910.1 (transcription factor bHLH130-like isoform X2 [Quercus lobata])

HSP 1 Score: 188.3 bits (477), Expect = 7.1e-44
Identity = 143/400 (35.75%), Postives = 183/400 (45.75%), Query Frame = 0


Query: 1   MESDIEQQHHR-QTNSGLSRYQSAPSSYFTSLIDRKLCEQFVSRPSSPETERIFARFMTS 60
           MESD++Q HH+ Q NSGL+RY+SAPSSYF ++IDR+ CE+F++RPSSPETERIFARF+  
Sbjct: 1   MESDLQQHHHQNQMNSGLTRYRSAPSSYFANIIDREFCEEFLNRPSSPETERIFARFIAD 60

Query: 61  G-------------------SAAAADQRTLYLAPTVKNETGDVSQASGLHQN-------- 120
           G                   +  A+ Q+T ++A ++ NE   V Q     Q+        
Sbjct: 61  GGGGGGGNGGTEVTNTSEVVATEASSQQTQFMA-SMNNEAAGVLQQQQQQQSNYGSASQN 120

Query: 121 --QWKRKPPLPNKSI----NLGMEM----------GGGNCSVIRQSSSPADL-------- 180
             Q   +PPLPN S+    ++G++           GG N S+IR SSSPA L        
Sbjct: 121 FYQGPPRPPLPNSSVEGSYSMGLDRLPQMKTGGGGGGNNSSLIRHSSSPAGLFANINVGE 180

Query: 181 -----------------------------------PCSKSG------------------- 224
                                              P S SG                   
Sbjct: 181 GYAAMRGVGNFGAGNSTNEEASFSSASRLKNYSSGPPSSSGLMSPIDEIEDKNMVVANNP 240

[Close]

BLAST of Tan0003117 vs. ExPASy TrEMBL
Match: A0A6J1D620 (transcription factor bHLH130-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017368 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.6e-76
Identity = 179/292 (61.30%), Postives = 201/292 (68.84%), Query Frame = 0


Query: 1   MESDIEQQ------------HHRQTNSGLSRYQSAPSSYFTSLIDRKLCEQFVSRPSSPE 60
           MESDI+Q+            HHRQTNSGL+RYQSAPSSYFTS++DRKLCEQFVSRPSSPE
Sbjct: 1   MESDIQQKHHRLLHDDQYELHHRQTNSGLTRYQSAPSSYFTSVVDRKLCEQFVSRPSSPE 60

Query: 61  TERIFARFMTSGSAAAADQRTLYLAPTVKNETGDVSQ--------ASGLHQNQWKRKPPL 120
           TERIFA+FMTSGS A   Q+ + + PTVK++  DV Q         S L+QNQW  KPPL
Sbjct: 61  TERIFAQFMTSGSGA---QQIVAVPPTVKSQAEDVIQKQSNMKRYTSVLNQNQW--KPPL 120

Query: 121 PNKSINL------GMEMGGGNCSVIRQSSSPADL-------------------------P 180
           PNKSINL       MEM GGNCS++RQSSSPA L                          
Sbjct: 121 PNKSINLRREDSYSMEM-GGNCSLVRQSSSPAQLLSHINLEIETGFPFENWEDTDTDIIM 180

Query: 181 CSKS---------------GGLVQLSDSVPCKIRAKRGCATHPRSIAERVRRTRISDRIR 227
            SKS                  + LSDSVPCKIRAKRGCATHPRSIAERVRRTRIS+R+R
Sbjct: 181 LSKSQNQHMKARNQGPMLGPAFLHLSDSVPCKIRAKRGCATHPRSIAERVRRTRISERMR 240

[Close]

BLAST of Tan0003117 vs. ExPASy TrEMBL
Match: A0A6J1D6H0 (transcription factor bHLH130-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017368 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 3.4e-76
Identity = 179/293 (61.09%), Postives = 201/293 (68.60%), Query Frame = 0


Query: 1   MESDIEQQ------------HHRQTNSGLSRYQSAPSSYFTSLIDRKLCEQFVSRPSSPE 60
           MESDI+Q+            HHRQTNSGL+RYQSAPSSYFTS++DRKLCEQFVSRPSSPE
Sbjct: 1   MESDIQQKHHRLLHDDQYELHHRQTNSGLTRYQSAPSSYFTSVVDRKLCEQFVSRPSSPE 60

Query: 61  TERIFARFMTSGSAAAADQRTLYLAPTVKNETGDVSQ--------ASGLHQNQWKRKPPL 120
           TERIFA+FMTSGS A   Q+ + + PTVK++  DV Q         S L+QNQW  KPPL
Sbjct: 61  TERIFAQFMTSGSGA---QQIVAVPPTVKSQAEDVIQKQSNMKRYTSVLNQNQW--KPPL 120

Query: 121 PNKSINL------GMEMGGGNCSVIRQSSSPADL-------------------------- 180
           PNKSINL       MEM GGNCS++RQSSSPA L                          
Sbjct: 121 PNKSINLRREDSYSMEM-GGNCSLVRQSSSPAQLLSHINLEIETAGFPFENWEDTDTDII 180

Query: 181 PCSKS---------------GGLVQLSDSVPCKIRAKRGCATHPRSIAERVRRTRISDRI 227
             SKS                  + LSDSVPCKIRAKRGCATHPRSIAERVRRTRIS+R+
Sbjct: 181 MLSKSQNQHMKARNQGPMLGPAFLHLSDSVPCKIRAKRGCATHPRSIAERVRRTRISERM 240

[Close]

BLAST of Tan0003117 vs. ExPASy TrEMBL
Match: A0A6J1D548 (transcription factor bHLH122-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111017368 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.2e-44
Identity = 126/239 (52.72%), Postives = 144/239 (60.25%), Query Frame = 0


Query: 1   MESDIEQQ------------HHRQTNSGLSRYQSAPSSYFTSLIDRKLCEQFVSRPSSPE 60
           MESDI+Q+            HHRQTNSGL+RYQSAPSSYFTS++DRKLCEQFVSRPSSPE
Sbjct: 1   MESDIQQKHHRLLHDDQYELHHRQTNSGLTRYQSAPSSYFTSVVDRKLCEQFVSRPSSPE 60

Query: 61  TERIFARFMTSGSAAAADQRTLYLAPTVKNETGDVSQ--------ASGLHQNQWKRKPPL 120
           TERIFA+FMTSGS A   Q+ + + PTVK++  DV Q         S L+QNQW  KPPL
Sbjct: 61  TERIFAQFMTSGSGA---QQIVAVPPTVKSQAEDVIQKQSNMKRYTSVLNQNQW--KPPL 120

Query: 121 PNKSINL------GMEMGGGNCSVIRQSSSPADL-------------------------- 173
           PNKSINL       MEM GGNCS++RQSSSPA L                          
Sbjct: 121 PNKSINLRREDSYSMEM-GGNCSLVRQSSSPAQLLSHINLEIETAGFPFENWEDTDTDII 180

[Close]

BLAST of Tan0003117 vs. ExPASy TrEMBL
Match: A0A6J1H9G5 (transcription factor bHLH122-like OS=Cucurbita moschata OX=3662 GN=LOC111461761 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 6.5e-43
Identity = 147/422 (34.83%), Postives = 180/422 (42.65%), Query Frame = 0


Query: 1   MESDIEQQHH---------RQTNSGLSRYQSAPSSYFTSLIDRKLCEQFVSRPSSPETER 60
           ME+D +Q HH          Q NSGL+RY+SAPSSYF  L DR+ C+QF +RPSSPETER
Sbjct: 1   MEADFQQHHHILHEQYQQQPQMNSGLTRYRSAPSSYFRRLTDREFCDQFFNRPSSPETER 60

Query: 61  IFARFMTSGSAAA-----------------------------ADQRTLYLAPTVK----- 120
           IFARFMTSG+A                               A+Q+T Y+    K     
Sbjct: 61  IFARFMTSGTAGGGGGSPEVSSQNLDESPKNAQAGEVFTATEANQQTPYMRNETKAIHQL 120

Query: 121 --NETGDVSQASGLHQ-NQWKRKPPLPNKSI--------NLGMEM-------GGGNCSVI 180
             N  G+   AS      Q   KPPLPN+ +        ++G+++       GG   ++I
Sbjct: 121 PSNVNGNYPPASSTPSFYQSSMKPPLPNQGMISGTEGSGSMGIDLKPRIRTDGGRTSNLI 180

Query: 181 RQSSSPA------------------------------------------DLPCSKSG--- 225
           RQSSSPA                                           LP   SG   
Sbjct: 181 RQSSSPAGLFDHIKINDGGYAALRGMGKFGTGNSVNEEASLPSPSRLKRSLPPHSSGLMS 240

[Close]

BLAST of Tan0003117 vs. ExPASy TrEMBL
Match: A0A6J1JGC3 (transcription factor bHLH122-like OS=Cucurbita maxima OX=3661 GN=LOC111485464 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.1e-42
Identity = 147/422 (34.83%), Postives = 179/422 (42.42%), Query Frame = 0


Query: 1   MESDIEQQHH---------RQTNSGLSRYQSAPSSYFTSLIDRKLCEQFVSRPSSPETER 60
           ME+D +Q HH          Q N GL+RY+SAPSSYF  L DR+ C+QF +RPSSPETER
Sbjct: 1   MEADFQQHHHILHEQYQQQPQMNPGLTRYRSAPSSYFRRLTDREFCDQFFNRPSSPETER 60

Query: 61  IFARFMTSGSAAA-----------------------------ADQRTLYLAPTVK----- 120
           IFARFMTSGSA                               A+Q+T Y+    K     
Sbjct: 61  IFARFMTSGSAGGGGGSPEVSSQNLGESPKNAQAGEVFITTEANQQTPYMRNETKAIHQQ 120

Query: 121 --NETGDVSQASGLHQ-NQWKRKPPLPNKSI--------NLGMEM-------GGGNCSVI 180
             N  G+   AS      Q   KPPLPN+ +        ++G+++       GG   ++I
Sbjct: 121 PSNVNGNYPPASSAPSFYQSSMKPPLPNQGMISGTEGSGSMGIDLKPRIRTDGGRTSNLI 180

Query: 181 RQSSSPA------------------------------------------DLPCSKSG--- 225
           RQSSSPA                                           LP   SG   
Sbjct: 181 RQSSSPAGLFDHIKINDGGYAALRGMGKFGTGNSVNEEASLPSPSRLKRSLPPHSSGLMS 240

[Close]

BLAST of Tan0003117 vs. TAIR 10
Match: AT2G42280.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 141.0 bits (354), Expect = 1.2e-33
Identity = 93/239 (38.91%), Postives = 128/239 (53.56%), Query Frame = 0


Query: 5   IEQQHHRQTNSGLSRYQSAPSSYFTSLIDR------KLCEQFVSRPSSPETERIFARFMT 64
           I   H +   S L R  S+P+  FT+L D+      +    +     SP       R  +
Sbjct: 119 INNHHTKPVESNLLRQSSSPAGMFTNLSDQNGYGSMRNLMNYEEDEESPSNSNGLRRHCS 178

Query: 65  SGSAAAADQRTLYLAPTVKNETG--------------DVSQASGLHQNQWKRKPPLPNKS 124
             S   +    L   P +  ET               ++S      ++  K      N  
Sbjct: 179 LSSRPPSSLGMLSQIPEIAPETNFPYSHWNDPSSFIDNLSSLKREAEDDGKLFLGAQNGE 238

Query: 125 INLGMEMGGGNCSVIRQSSSPADLPCSKSGGLVQLSDSVPCKIRAKRGCATHPRSIAERV 184
               M++   + S+ + SS+ +D+        +QL DSVPCKIRAKRGCATHPRSIAERV
Sbjct: 239 SGNRMQLLSHHLSLPKSSSTASDMVSVDK--YLQLQDSVPCKIRAKRGCATHPRSIAERV 298

Query: 185 RRTRISDRIRKLQELVPNMDKQANTSEMLDLAIEYIKGLQKQVQTLSNSHENCRCSNKQ 224
           RRTRIS+R+RKLQELVPNMDKQ NTS+MLDLA++YIK LQ+Q + L+++  NC+C NK+
Sbjct: 299 RRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQYKILNDNRANCKCMNKE 355

[Close]

BLAST of Tan0003117 vs. TAIR 10
Match: AT1G51140.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 132.5 bits (332), Expect = 4.3e-31
Identity = 118/380 (31.05%), Postives = 152/380 (40.00%), Query Frame = 0


Query: 1   MESDIEQ--------QHHRQTNSGLSRYQSAPSSYFTSLIDRKLCEQFVSRPSSPETERI 60
           MES+ +Q        QH R  NSGL RYQSAPSSYF+S    +  E+F+ RP+SPETERI
Sbjct: 1   MESEFQQHHFLLHDHQHQRPRNSGLIRYQSAPSSYFSSF--GESIEEFLDRPTSPETERI 60

Query: 61  FARFM------------------------------------------------------- 120
            + F+                                                       
Sbjct: 61  LSGFLQTTDTSDNVDSFLHHTFNSDGTEKKPPEVKTEDEDAEIPVTATATAMEVVVSGDG 120

Query: 121 ----------------------------------------TSGSAAAADQRTLYLA---- 180
                                                    +G  ++ D  T Y A    
Sbjct: 121 EISVNPEVSIGYVASVSRNKRPREKDDRTPVNNLARHNSSPAGLFSSIDVETAYAAVMKS 180

Query: 181 ----------PTVKNETGDVSQASGLHQNQWKRKPPLPNKSINLGME--------MGGGN 222
                      T   E   ++  S L     +   P+    +  G           GG N
Sbjct: 181 MGGFGGSNVMSTSNTEASSLTPRSKLLPPTSRAMSPISEVDVKPGFSSRLPPRTLSGGFN 240

[Close]

BLAST of Tan0003117 vs. TAIR 10
Match: AT1G35460.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 127.1 bits (318), Expect = 1.8e-29
Identity = 59/83 (71.08%), Postives = 72/83 (86.75%), Query Frame = 0


Query: 141 DSVPCKIRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQANTSEMLDLAIEYI 200
           DSVPC++RAKRGCATHPRSIAERVRRTRISDRIR+LQELVPNMDKQ NT++ML+ A+EY+
Sbjct: 175 DSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYV 234

Query: 201 KGLQKQVQTLSNSHENCRCSNKQ 224
           K LQ Q+Q L+   + C+C  K+
Sbjct: 235 KALQSQIQELTEQQKRCKCKPKE 257

[Close]

BLAST of Tan0003117 vs. TAIR 10
Match: AT1G05805.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 125.9 bits (315), Expect = 4.0e-29
Identity = 65/106 (61.32%), Postives = 79/106 (74.53%), Query Frame = 0


Query: 121 QSSSPADLPCSKSGGLVQL-SDSVPCKIRAKRGCATHPRSIAERVRRTRISDRIRKLQEL 180
           Q S P+D   +     +QL  DSVPCKIRAKRGCATHPRSIAER RRTRIS +++KLQ+L
Sbjct: 256 QYSLPSDTSMNYMDNFMQLPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDL 315

Query: 181 VPNMDKQANTSEMLDLAIEYIKGLQKQVQTLSNSHENCRCSNKQLP 226
           VPNMDKQ + S+MLDLA+++IKGLQ Q+Q L    ENC C   + P
Sbjct: 316 VPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKKDQENCTCGCSEKP 361

[Close]

BLAST of Tan0003117 vs. TAIR 10
Match: AT4G09180.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 119.4 bits (298), Expect = 3.8e-27
Identity = 58/85 (68.24%), Postives = 71/85 (83.53%), Query Frame = 0


Query: 139 LSDSVPCKIRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQANTSEMLDLAIE 198
           + DSV  ++RAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQ NT++ML+ A+E
Sbjct: 176 MEDSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVE 235

Query: 199 YIKGLQKQVQTLSNSHENCRCSNKQ 224
           Y+K LQ+Q+Q L+   + C C  K+
Sbjct: 236 YVKVLQRQIQELTEEQKRCTCIPKE 260

The following BLAST results are available for this feature:

BLAST of Tan0003117 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q66GR3	1.7e-32	38.91	Transcription factor bHLH130 OS=Arabidopsis thaliana OX=3702 GN=BHLH130 PE=1 SV=...	[more]
Q9C690	6.1e-30	31.05	Transcription factor bHLH122 OS=Arabidopsis thaliana OX=3702 GN=BHLH122 PE=1 SV=...	[more]
Q9C8P8	2.5e-28	71.08	Transcription factor bHLH80 OS=Arabidopsis thaliana OX=3702 GN=BHLH80 PE=2 SV=1	[more]
Q8H102	5.7e-28	61.32	Transcription factor bHLH128 OS=Arabidopsis thaliana OX=3702 GN=BHLH128 PE=1 SV=...	[more]
Q9M0R0	5.3e-26	68.24	Transcription factor bHLH81 OS=Arabidopsis thaliana OX=3702 GN=BHLH81 PE=2 SV=1	[more]

BLAST of Tan0003117 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148802.1	5.4e-76	61.30	transcription factor bHLH130-like isoform X2 [Momordica charantia]	[more]
XP_022148801.1	7.0e-76	61.09	transcription factor bHLH130-like isoform X1 [Momordica charantia]	[more]
XP_022148803.1	2.4e-44	52.72	transcription factor bHLH122-like isoform X3 [Momordica charantia]	[more]
KAF3452571.1	3.2e-44	35.70	hypothetical protein FNV43_RR03004 [Rhamnella rubrinervis]	[more]
XP_030952910.1	7.1e-44	35.75	transcription factor bHLH130-like isoform X2 [Quercus lobata]	[more]

BLAST of Tan0003117 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D620	2.6e-76	61.30	transcription factor bHLH130-like isoform X2 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1D6H0	3.4e-76	61.09	transcription factor bHLH130-like isoform X1 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1D548	1.2e-44	52.72	transcription factor bHLH122-like isoform X3 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1H9G5	6.5e-43	34.83	transcription factor bHLH122-like OS=Cucurbita moschata OX=3662 GN=LOC111461761 ...	[more]
A0A6J1JGC3	1.1e-42	34.83	transcription factor bHLH122-like OS=Cucurbita maxima OX=3661 GN=LOC111485464 PE...	[more]

BLAST of Tan0003117 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42280.1	1.2e-33	38.91	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G51140.1	4.3e-31	31.05	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G35460.1	1.8e-29	71.08	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G05805.1	4.0e-29	61.32	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G09180.1	3.8e-27	68.24	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 159..209 e-value: 2.6E-13 score: 60.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 159..204 e-value: 1.3E-10 score: 41.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 153..203 score: 14.500299
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 154..226 e-value: 8.8E-16 score: 59.8
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 156..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 6..64
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 137..223
None	No IPR available	PANTHER	PTHR16223:SF247	TRANSCRIPTION FACTOR BHLH FAMILY-RELATED	coord: 6..64
None	No IPR available	PANTHER	PTHR16223:SF247	TRANSCRIPTION FACTOR BHLH FAMILY-RELATED	coord: 137..223
None	No IPR available	CDD	cd11393	bHLH_AtbHLH_like	coord: 158..211 e-value: 1.5518E-20 score: 79.5327

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0003117.1	Tan0003117.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046983	protein dimerization activity