Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATATCAGCCTCAAAACGAGTCAAAAACTCACTTTCAAACTCGCCCGATTTCGACTCAGCCTGCGATTCAACCTTCTCCCACTGCCTAGCCCTAACACAACACGCATACGGTGGCGTTTTCCCCTACCAACTCTGCGCCGCCGCCGAGCACCTGCACCACCACCTCACCGGCGTCCGACCCCATCCACTCATCGCCAAGTGGCTTCCCTCTCCTCCGACTCTGCTCCAGGTCGACTCAGCCCTCCGAGCCGTCAATCGCGAGGACACGGATCATGAAGACGAAACCCTAGGCCCGATCCGCTTCAAGCGTTGGGCAATCGAGCTATTCGCAGAGGCTGTGGCGAGGAACGTCGGAAAAGAGGTGATGTTTCGAGTTCCGGTCGGAATTGCGCGAATCGGTGCCGTGACTCGGTCCGGAAAGGACCTGGTCGGGATTGATGAGTAG
mRNA sequence
ATGGGAATATCAGCCTCAAAACGAGTCAAAAACTCACTTTCAAACTCGCCCGATTTCGACTCAGCCTGCGATTCAACCTTCTCCCACTGCCTAGCCCTAACACAACACGCATACGGTGGCGTTTTCCCCTACCAACTCTGCGCCGCCGCCGAGCACCTGCACCACCACCTCACCGGCGTCGACTCAGCCCTCCGAGCCGTCAATCGCGAGGACACGGATCATGAAGACGAAACCCTAGGCCCGATCCGCTTCAAGCGTTGGGCAATCGAGCTATTCGCAGAGGCTGTGGCGAGGAACGTCGGAAAAGAGGTGATGTTTCGAGTTCCGGTCGGAATTGCGCGAATCGGTGCCGTGACTCGGTCCGGAAAGGACCTGGTCGGGATTGATGAGTAG
Coding sequence (CDS)
ATGGGAATATCAGCCTCAAAACGAGTCAAAAACTCACTTTCAAACTCGCCCGATTTCGACTCAGCCTGCGATTCAACCTTCTCCCACTGCCTAGCCCTAACACAACACGCATACGGTGGCGTTTTCCCCTACCAACTCTGCGCCGCCGCCGAGCACCTGCACCACCACCTCACCGGCGTCGACTCAGCCCTCCGAGCCGTCAATCGCGAGGACACGGATCATGAAGACGAAACCCTAGGCCCGATCCGCTTCAAGCGTTGGGCAATCGAGCTATTCGCAGAGGCTGTGGCGAGGAACGTCGGAAAAGAGGTGATGTTTCGAGTTCCGGTCGGAATTGCGCGAATCGGTGCCGTGACTCGGTCCGGAAAGGACCTGGTCGGGATTGATGAGTAG
Protein sequence
MGISASKRVKNSLSNSPDFDSACDSTFSHCLALTQHAYGGVFPYQLCAAAEHLHHHLTGVDSALRAVNREDTDHEDETLGPIRFKRWAIELFAEAVARNVGKEVMFRVPVGIARIGAVTRSGKDLVGIDE
Homology
BLAST of Tan0003033 vs. NCBI nr
Match:
XP_023539875.1 (uncharacterized protein LOC111800422 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 206.1 bits (523), Expect = 1.9e-49
Identity = 114/150 (76.00%), Postives = 116/150 (77.33%), Query Frame = 0
Query: 1 MGISASKRVKNSLSNSPDFDSACDSTFSHCLALTQHAYGGVFPYQLCAAAEHLHHHLT-- 60
MGISASKRVKNSLSNSPDFDSACDSTFSHCL LTQHAY GVFPYQLC AA+HLH LT
Sbjct: 1 MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTV 60
Query: 61 -----------------GVDSALRAVNREDTDHED-ETLGPIRFKRWAIELFAEAVARNV 120
VDSALRAVNRED D ED ETLGPIRFKRWAIELFAEAV +NV
Sbjct: 61 RPHPLISKWLPSPPTRQQVDSALRAVNREDADREDEETLGPIRFKRWAIELFAEAVVKNV 120
Query: 121 GKEVMFRVPV---GIARIGAVTRSGKDLVG 128
KEVMFRVPV GIA IGAVTRSGKDLVG
Sbjct: 121 SKEVMFRVPVGIAGIAGIGAVTRSGKDLVG 150
BLAST of Tan0003033 vs. NCBI nr
Match:
KAG7029126.1 (hypothetical protein SDJN02_10311, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 204.9 bits (520), Expect = 4.2e-49
Identity = 113/150 (75.33%), Postives = 116/150 (77.33%), Query Frame = 0
Query: 1 MGISASKRVKNSLSNSPDFDSACDSTFSHCLALTQHAYGGVFPYQLCAAAEHLHHHLT-- 60
MGISASKRVKNSLSNSPDFDSACDSTFSHCL LTQHAY GVFPYQLC AA+HLH LT
Sbjct: 1 MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTV 60
Query: 61 -----------------GVDSALRAVNREDTDHED-ETLGPIRFKRWAIELFAEAVARNV 120
VDSALRAVNRED D ED ETLGPIRFKRWA+ELFAEAV +NV
Sbjct: 61 RPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLGPIRFKRWAMELFAEAVVKNV 120
Query: 121 GKEVMFRVPV---GIARIGAVTRSGKDLVG 128
KEVMFRVPV GIA IGAVTRSGKDLVG
Sbjct: 121 SKEVMFRVPVGIAGIAGIGAVTRSGKDLVG 150
BLAST of Tan0003033 vs. NCBI nr
Match:
KAG6597681.1 (DNA-directed RNA polymerases II and V subunit 8A, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 204.9 bits (520), Expect = 4.2e-49
Identity = 113/150 (75.33%), Postives = 116/150 (77.33%), Query Frame = 0
Query: 1 MGISASKRVKNSLSNSPDFDSACDSTFSHCLALTQHAYGGVFPYQLCAAAEHLHHHLT-- 60
MGISASKRVKNSLSNSPDFDSACDSTFSHCL LTQHAY GVFPYQLC AA+HLH LT
Sbjct: 1 MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTV 60
Query: 61 -----------------GVDSALRAVNREDTDHED-ETLGPIRFKRWAIELFAEAVARNV 120
VDSALRAVNRED D ED ETLGPIRFKRWA+ELFAEAV +NV
Sbjct: 61 RPHPLIAKWLPSPLTRQQVDSALRAVNREDADREDEETLGPIRFKRWAMELFAEAVVKNV 120
Query: 121 GKEVMFRVPV---GIARIGAVTRSGKDLVG 128
KEVMFRVPV GIA IGAVTRSGKDLVG
Sbjct: 121 SKEVMFRVPVGIAGIAGIGAVTRSGKDLVG 150
BLAST of Tan0003033 vs. NCBI nr
Match:
XP_022932745.1 (uncharacterized protein LOC111439202 [Cucurbita moschata])
HSP 1 Score: 203.8 bits (517), Expect = 9.3e-49
Identity = 112/150 (74.67%), Postives = 116/150 (77.33%), Query Frame = 0
Query: 1 MGISASKRVKNSLSNSPDFDSACDSTFSHCLALTQHAYGGVFPYQLCAAAEHLHHHLT-- 60
MGISASKRV+NSLSNSPDFDSACDSTFSHCL LTQHAY GVFPYQLC AA+HLH LT
Sbjct: 1 MGISASKRVRNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTV 60
Query: 61 -----------------GVDSALRAVNREDTDHED-ETLGPIRFKRWAIELFAEAVARNV 120
VDSALRAVNRED D ED ETLGPIRFKRWA+ELFAEAV +NV
Sbjct: 61 RPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLGPIRFKRWAMELFAEAVVKNV 120
Query: 121 GKEVMFRVPV---GIARIGAVTRSGKDLVG 128
KEVMFRVPV GIA IGAVTRSGKDLVG
Sbjct: 121 SKEVMFRVPVGIAGIAGIGAVTRSGKDLVG 150
BLAST of Tan0003033 vs. NCBI nr
Match:
XP_038878178.1 (uncharacterized protein LOC120070324 [Benincasa hispida])
HSP 1 Score: 198.0 bits (502), Expect = 5.1e-47
Identity = 106/149 (71.14%), Postives = 117/149 (78.52%), Query Frame = 0
Query: 1 MGISASKRVKNSLSNSPDFDSACDSTFSHCLALTQHAYGGVFPYQLCAAAEHLHHHLT-- 60
MGISASKRV+NSL+NS +FD AC+STFSHCLALTQHAY GVFPYQLCAAA+HLHH +T
Sbjct: 1 MGISASKRVRNSLTNSLEFDLACNSTFSHCLALTQHAYDGVFPYQLCAAADHLHHLITVV 60
Query: 61 -----------------GVDSALRAVNREDTDHEDETLGPIRFKRWAIELFAEAVARNVG 120
VDSALRAVNR+D+D E ETLGPIRFK WAIELFAEAVA+NVG
Sbjct: 61 RPHPLIANWLPSPPTRLQVDSALRAVNRDDSDREGETLGPIRFKHWAIELFAEAVAKNVG 120
Query: 121 KEVMFRVPV---GIARIGAVTRSGKDLVG 128
K+VM RVPV GIA IGAVTRSGKD+VG
Sbjct: 121 KKVMLRVPVGIAGIAGIGAVTRSGKDVVG 149
BLAST of Tan0003033 vs. ExPASy TrEMBL
Match:
A0A6J1F2Z4 (uncharacterized protein LOC111439202 OS=Cucurbita moschata OX=3662 GN=LOC111439202 PE=4 SV=1)
HSP 1 Score: 203.8 bits (517), Expect = 4.5e-49
Identity = 112/150 (74.67%), Postives = 116/150 (77.33%), Query Frame = 0
Query: 1 MGISASKRVKNSLSNSPDFDSACDSTFSHCLALTQHAYGGVFPYQLCAAAEHLHHHLT-- 60
MGISASKRV+NSLSNSPDFDSACDSTFSHCL LTQHAY GVFPYQLC AA+HLH LT
Sbjct: 1 MGISASKRVRNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTV 60
Query: 61 -----------------GVDSALRAVNREDTDHED-ETLGPIRFKRWAIELFAEAVARNV 120
VDSALRAVNRED D ED ETLGPIRFKRWA+ELFAEAV +NV
Sbjct: 61 RPHPLIAKWLPSPPTRQQVDSALRAVNREDADREDEETLGPIRFKRWAMELFAEAVVKNV 120
Query: 121 GKEVMFRVPV---GIARIGAVTRSGKDLVG 128
KEVMFRVPV GIA IGAVTRSGKDLVG
Sbjct: 121 SKEVMFRVPVGIAGIAGIGAVTRSGKDLVG 150
BLAST of Tan0003033 vs. ExPASy TrEMBL
Match:
A0A6J1I3X0 (uncharacterized protein LOC111470752 OS=Cucurbita maxima OX=3661 GN=LOC111470752 PE=4 SV=1)
HSP 1 Score: 197.2 bits (500), Expect = 4.2e-47
Identity = 110/150 (73.33%), Postives = 113/150 (75.33%), Query Frame = 0
Query: 1 MGISASKRVKNSLSNSPDFDSACDSTFSHCLALTQHAYGGVFPYQLCAAAEHLHHHLT-- 60
MGISASKRVKNSLSNSPDFDSACDSTFSHCL LTQHAY GVFPYQLC AA+HLH LT
Sbjct: 1 MGISASKRVKNSLSNSPDFDSACDSTFSHCLDLTQHAYAGVFPYQLCTAADHLHRLLTTV 60
Query: 61 -----------------GVDSALRAVNREDTDHED-ETLGPIRFKRWAIELFAEAVARNV 120
VDSAL+AVNR D ED ETLGPIRFK WAIELFAEAV +NV
Sbjct: 61 RPHPLISKWLPSPPTRLQVDSALQAVNRGDAGREDEETLGPIRFKHWAIELFAEAVVKNV 120
Query: 121 GKEVMFRVPV---GIARIGAVTRSGKDLVG 128
KEVMFRVPV GIA IGAVTRSGKDLVG
Sbjct: 121 SKEVMFRVPVGIAGIAGIGAVTRSGKDLVG 150
BLAST of Tan0003033 vs. ExPASy TrEMBL
Match:
A0A5D3D2N6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001950 PE=4 SV=1)
HSP 1 Score: 195.3 bits (495), Expect = 1.6e-46
Identity = 104/149 (69.80%), Postives = 117/149 (78.52%), Query Frame = 0
Query: 1 MGISASKRVKNSLSNSPDFDSACDSTFSHCLALTQHAYGGVFPYQLCAAAEHLHHHLT-- 60
MG+SASKRV+NSL+NSP+FDSAC+STFSHCLALTQHAY GVFPYQLC AA+HLHH LT
Sbjct: 1 MGLSASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV 60
Query: 61 -----------------GVDSALRAVNREDTDHEDETLGPIRFKRWAIELFAEAVARNVG 120
VDSALRAVNR+D+D E ETLG IRF+RWAIELFAEAV +NVG
Sbjct: 61 QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDCEGETLGLIRFQRWAIELFAEAVVKNVG 120
Query: 121 KEVMFRVPV---GIARIGAVTRSGKDLVG 128
K+VM RVP+ GIA IGAVTRSGKD+VG
Sbjct: 121 KKVMVRVPMGIAGIAGIGAVTRSGKDVVG 149
BLAST of Tan0003033 vs. ExPASy TrEMBL
Match:
A0A1S3BXX1 (uncharacterized protein LOC103494601 OS=Cucumis melo OX=3656 GN=LOC103494601 PE=4 SV=1)
HSP 1 Score: 195.3 bits (495), Expect = 1.6e-46
Identity = 104/149 (69.80%), Postives = 117/149 (78.52%), Query Frame = 0
Query: 1 MGISASKRVKNSLSNSPDFDSACDSTFSHCLALTQHAYGGVFPYQLCAAAEHLHHHLT-- 60
MG+SASKRV+NSL+NSP+FDSAC+STFSHCLALTQHAY GVFPYQLC AA+HLHH LT
Sbjct: 1 MGLSASKRVRNSLTNSPEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVV 60
Query: 61 -----------------GVDSALRAVNREDTDHEDETLGPIRFKRWAIELFAEAVARNVG 120
VDSALRAVNR+D+D E ETLG IRF+RWAIELFAEAV +NVG
Sbjct: 61 QPHPLITNWLPSPPTRLQVDSALRAVNRDDSDCEGETLGLIRFQRWAIELFAEAVVKNVG 120
Query: 121 KEVMFRVPV---GIARIGAVTRSGKDLVG 128
K+VM RVP+ GIA IGAVTRSGKD+VG
Sbjct: 121 KKVMVRVPMGIAGIAGIGAVTRSGKDVVG 149
BLAST of Tan0003033 vs. ExPASy TrEMBL
Match:
A0A6J1CX41 (uncharacterized protein LOC111015217 OS=Momordica charantia OX=3673 GN=LOC111015217 PE=4 SV=1)
HSP 1 Score: 194.5 bits (493), Expect = 2.7e-46
Identity = 102/149 (68.46%), Postives = 114/149 (76.51%), Query Frame = 0
Query: 1 MGISASKRVKNSLSNSPDFDSACDSTFSHCLALTQHAYGGVFPYQLCAAAEHLHHHLTG- 60
MGIS SKRV+NSLSNSP+FDSACDSTFSHCL+ TQHAY GVFPYQLCAAA HLH LT
Sbjct: 1 MGISPSKRVQNSLSNSPEFDSACDSTFSHCLSQTQHAYDGVFPYQLCAAAAHLHRLLTAV 60
Query: 61 ------------------VDSALRAVNREDTDHEDETLGPIRFKRWAIELFAEAVARNVG 120
VDSALR + R D+D +DETLGPIRFKRWAIELFAEAVA NVG
Sbjct: 61 RPHPLILKWLPSPPTRLQVDSALRVIKRADSDRDDETLGPIRFKRWAIELFAEAVAENVG 120
Query: 121 KEVMFRVPV---GIARIGAVTRSGKDLVG 128
+EV+FR+PV GIA +GAVTR+GK+LVG
Sbjct: 121 REVLFRIPVGAAGIAGLGAVTRAGKNLVG 149
BLAST of Tan0003033 vs. TAIR 10
Match:
AT2G43540.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 27 Blast hits to 27 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 130.2 bits (326), Expect = 1.2e-30
Identity = 75/149 (50.34%), Postives = 93/149 (62.42%), Query Frame = 0
Query: 1 MGISASKRVKNSLSNSPDFDSACDSTFSHCLALTQHAYGGVFPYQLCAAAEHLHHHLTG- 60
MGIS SKRV LSNSP+FDSACDS + L+L QHA+ GV PYQL +AA H+H +L+
Sbjct: 1 MGISGSKRVTTILSNSPEFDSACDSAYDESLSLAQHAFAGVRPYQLVSAAAHIHRNLSAL 60
Query: 61 -----------------VDSALR-AVNREDTDHEDETLGPIRFKRWAIELFAEAVARNVG 120
VDSALR V+R E+E LG FK+WA+E+FAEAV N
Sbjct: 61 RFPLITRWLSSPPSQSQVDSALRVTVSRVTAADEEEILGQEEFKKWAVEVFAEAVVGNAR 120
Query: 121 KEVMFRVP---VGIARIGAVTRSGKDLVG 128
K + R+P VGI IGAVTRSG++L+G
Sbjct: 121 KTIASRIPLGIVGIGGIGAVTRSGQNLIG 149
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_023539875.1 | 1.9e-49 | 76.00 | uncharacterized protein LOC111800422 [Cucurbita pepo subsp. pepo] | [more] |
KAG7029126.1 | 4.2e-49 | 75.33 | hypothetical protein SDJN02_10311, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6597681.1 | 4.2e-49 | 75.33 | DNA-directed RNA polymerases II and V subunit 8A, partial [Cucurbita argyrosperm... | [more] |
XP_022932745.1 | 9.3e-49 | 74.67 | uncharacterized protein LOC111439202 [Cucurbita moschata] | [more] |
XP_038878178.1 | 5.1e-47 | 71.14 | uncharacterized protein LOC120070324 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1F2Z4 | 4.5e-49 | 74.67 | uncharacterized protein LOC111439202 OS=Cucurbita moschata OX=3662 GN=LOC1114392... | [more] |
A0A6J1I3X0 | 4.2e-47 | 73.33 | uncharacterized protein LOC111470752 OS=Cucurbita maxima OX=3661 GN=LOC111470752... | [more] |
A0A5D3D2N6 | 1.6e-46 | 69.80 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S3BXX1 | 1.6e-46 | 69.80 | uncharacterized protein LOC103494601 OS=Cucumis melo OX=3656 GN=LOC103494601 PE=... | [more] |
A0A6J1CX41 | 2.7e-46 | 68.46 | uncharacterized protein LOC111015217 OS=Momordica charantia OX=3673 GN=LOC111015... | [more] |
Match Name | E-value | Identity | Description | |
AT2G43540.1 | 1.2e-30 | 50.34 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... | [more] |