Tan0003026 (gene) Snake gourd v1

Overview


Name	Tan0003026
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Glycosyltransferase family 28 protein
Location	LG10: 1615070 .. 1615399 (-)
RNA-Seq Expression	Tan0003026
Synteny	Tan0003026

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGAAAATTTAAGCGTATGGGACTGTGGCAGTCCATTATACGACTCCTACGAGCTCGCCTCCCTCGCCCATCTCATTGACCGGAATCTCATGGCATTGCCGCCGCCCTACCACGGCGGATCACGGCGGTTCTCCTCCAACAAAGTCTCCCATTTCTCTGATTTCATTCCATCTCCACCGCCGACGTCCGCCGTCACTGCCATGTCTTTGAAAAAGAAGCCGGTCGGCCAAATCAAGAACAAGCTCAAGAAATTAAAAACTACTGTGAGGCTTTCTGCAATTTTTAGCAGATTTGGGTTTTCGAGGAAGAAGCAAACTCAAATATGA

mRNA sequence

ATGAGAGAAAATTTAAGCGTATGGGACTGTGGCAGTCCATTATACGACTCCTACGAGCTCGCCTCCCTCGCCCATCTCATTGACCGGAATCTCATGGCATTGCCGCCGCCCTACCACGGCGGATCACGGCGGTTCTCCTCCAACAAAGTCTCCCATTTCTCTGATTTCATTCCATCTCCACCGCCGACGTCCGCCGTCACTGCCATGTCTTTGAAAAAGAAGCCGGTCGGCCAAATCAAGAACAAGCTCAAGAAATTAAAAACTACTGTGAGGCTTTCTGCAATTTTTAGCAGATTTGGGTTTTCGAGGAAGAAGCAAACTCAAATATGA

Coding sequence (CDS)

ATGAGAGAAAATTTAAGCGTATGGGACTGTGGCAGTCCATTATACGACTCCTACGAGCTCGCCTCCCTCGCCCATCTCATTGACCGGAATCTCATGGCATTGCCGCCGCCCTACCACGGCGGATCACGGCGGTTCTCCTCCAACAAAGTCTCCCATTTCTCTGATTTCATTCCATCTCCACCGCCGACGTCCGCCGTCACTGCCATGTCTTTGAAAAAGAAGCCGGTCGGCCAAATCAAGAACAAGCTCAAGAAATTAAAAACTACTGTGAGGCTTTCTGCAATTTTTAGCAGATTTGGGTTTTCGAGGAAGAAGCAAACTCAAATATGA

Protein sequence

MRENLSVWDCGSPLYDSYELASLAHLIDRNLMALPPPYHGGSRRFSSNKVSHFSDFIPSPPPTSAVTAMSLKKKPVGQIKNKLKKLKTTVRLSAIFSRFGFSRKKQTQI

Homology

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BLAST of Tan0003026 vs. NCBI nr
Match: KAE8650237.1 (hypothetical protein Csa_011169 [Cucumis sativus])

HSP 1 Score: 149.4 bits (376), Expect = 1.7e-32
Identity = 76/112 (67.86%), Postives = 86/112 (76.79%), Query Frame = 0


Query: 1   MRENLSVWDCGSPLYDSYELASLAHLIDRNLMALPPPYHGGSRRFSSNKVSHFSDFIPSP 60
           M   LSVWDCGSPLYDSYELASLAHLIDRNL+A PPPYH GSRR +SNKVSHF     +P
Sbjct: 9   MMRELSVWDCGSPLYDSYELASLAHLIDRNLLAFPPPYHAGSRRITSNKVSHFHFSHLTP 68

Query: 61  PPTSAVTAMSLKKKP---VGQIKNKLKKLKTTVRLSAIFSRFGFSRKKQTQI 110
           PP SAV   SL+KKP   V ++KNKLKK K+T R S+I +RFG  RKKQ Q+
Sbjct: 69  PPPSAVINASLEKKPPAVVDELKNKLKKFKSTFRFSSISNRFGLWRKKQFQV 120

[Close]

BLAST of Tan0003026 vs. NCBI nr
Match: TYK17659.1 (glycosyltransferase family 28 protein [Cucumis melo var. makuwa])

HSP 1 Score: 148.7 bits (374), Expect = 3.0e-32
Identity = 81/114 (71.05%), Postives = 88/114 (77.19%), Query Frame = 0


Query: 1   MRENLSVWDCGSPLYDSYELASLAHLIDRNLMALPPPYHGGSRRFSSNKVS--HFSDFIP 60
           MR+  SVWDCGSPLYDSYELASLAHLIDRNL+A PPPYH GSRR +SNKVS  HFS FIP
Sbjct: 1   MRDQSSVWDCGSPLYDSYELASLAHLIDRNLLAFPPPYHAGSRRITSNKVSHFHFSPFIP 60

Query: 61  SPPPTSAVTAMSLKKKPVG---QIKNKLKKLKTTVRLSAIFSRFGFSRKKQTQI 110
            PPP SAV   S KKKP      IKNK+KKLK+T R S+I S FGF RKKQ Q+
Sbjct: 61  -PPPPSAVNG-SFKKKPPAVDELIKNKIKKLKSTFRFSSISSGFGFWRKKQIQV 112

[Close]

BLAST of Tan0003026 vs. NCBI nr
Match: KAA0048909.1 (glycosyltransferase family 28 protein [Cucumis melo var. makuwa])

HSP 1 Score: 148.7 bits (374), Expect = 3.0e-32
Identity = 81/114 (71.05%), Postives = 88/114 (77.19%), Query Frame = 0


Query: 1   MRENLSVWDCGSPLYDSYELASLAHLIDRNLMALPPPYHGGSRRFSSNKVS--HFSDFIP 60
           MR+  SVWDCGSPLYDSYELASLAHLIDRNL+A PPPYH GSRR +SNKVS  HFS FIP
Sbjct: 1   MRDRSSVWDCGSPLYDSYELASLAHLIDRNLLAFPPPYHAGSRRITSNKVSHFHFSPFIP 60

Query: 61  SPPPTSAVTAMSLKKKPVG---QIKNKLKKLKTTVRLSAIFSRFGFSRKKQTQI 110
            PPP SAV   S KKKP      IKNK+KKLK+T R S+I S FGF RKKQ Q+
Sbjct: 61  -PPPPSAVNG-SFKKKPPAVDELIKNKIKKLKSTFRFSSISSGFGFWRKKQIQV 112

[Close]

BLAST of Tan0003026 vs. NCBI nr
Match: KAG6597095.1 (Protein ENHANCED DISEASE RESISTANCE 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 143.7 bits (361), Expect = 9.6e-31
Identity = 71/104 (68.27%), Postives = 81/104 (77.88%), Query Frame = 0


Query: 1   MRENLSVWDCGSPLYDSYELASLAHLIDRNLMALPPPYHGGSRRFSSNKVSHFSDFIPSP 60
           MRE L VWDCGSPLYDSYELASLAH+IDR+LMALPPP++GGSRRF SNKVSHFSD +PSP
Sbjct: 1   MREELGVWDCGSPLYDSYELASLAHIIDRHLMALPPPHYGGSRRFFSNKVSHFSDIMPSP 60

Query: 61  PPTSAVTAMSLKKKPVGQIKNKLKKLKTTVRLSAIFSRFGFSRK 105
           P    ++  +LKKKPVG++KNKLKK KTT         F F  K
Sbjct: 61  P----LSTSTLKKKPVGEMKNKLKKFKTTYTFFVFREIFFFPPK 100

[Close]

BLAST of Tan0003026 vs. NCBI nr
Match: XP_031263278.1 (uncharacterized protein LOC116121461 [Pistacia vera])

HSP 1 Score: 76.3 bits (186), Expect = 1.9e-10
Identity = 52/122 (42.62%), Postives = 74/122 (60.66%), Query Frame = 0


Query: 5   LSVWDCGSPLYDSYELASLAHLIDRNLMALPPPYHGGSRRF----------SSN--KVSH 64
           +++WDCGSPLYDSYEL SL HLI+R+LMALP    GGS+R           SSN   ++H
Sbjct: 18  VAIWDCGSPLYDSYELVSLTHLIERHLMALPS--LGGSKRLTTKFYCPCDVSSNVRSITH 77

Query: 65  FSDFIPSPPPTSAVTAMS-------LKKK-PVGQIKNKLKKLKTTVRLSAIFSRFGFSRK 107
                  PP +SA++++S       LK+K  VG++ +K K+LK    L  ++  FGF +K
Sbjct: 78  -----TKPPSSSAISSLSDYVGRKLLKRKIGVGEVIDKRKRLKI---LCGMYKAFGFWKK 129

[Close]

BLAST of Tan0003026 vs. ExPASy TrEMBL
Match: A0A0A0L377 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119750 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 8.5e-33
Identity = 76/112 (67.86%), Postives = 86/112 (76.79%), Query Frame = 0


Query: 1   MRENLSVWDCGSPLYDSYELASLAHLIDRNLMALPPPYHGGSRRFSSNKVSHFSDFIPSP 60
           M   LSVWDCGSPLYDSYELASLAHLIDRNL+A PPPYH GSRR +SNKVSHF     +P
Sbjct: 1   MMRELSVWDCGSPLYDSYELASLAHLIDRNLLAFPPPYHAGSRRITSNKVSHFHFSHLTP 60

Query: 61  PPTSAVTAMSLKKKP---VGQIKNKLKKLKTTVRLSAIFSRFGFSRKKQTQI 110
           PP SAV   SL+KKP   V ++KNKLKK K+T R S+I +RFG  RKKQ Q+
Sbjct: 61  PPPSAVINASLEKKPPAVVDELKNKLKKFKSTFRFSSISNRFGLWRKKQFQV 112

[Close]

BLAST of Tan0003026 vs. ExPASy TrEMBL
Match: A0A5A7U611 (Glycosyltransferase family 28 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G001280 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.4e-32
Identity = 81/114 (71.05%), Postives = 88/114 (77.19%), Query Frame = 0


Query: 1   MRENLSVWDCGSPLYDSYELASLAHLIDRNLMALPPPYHGGSRRFSSNKVS--HFSDFIP 60
           MR+  SVWDCGSPLYDSYELASLAHLIDRNL+A PPPYH GSRR +SNKVS  HFS FIP
Sbjct: 1   MRDRSSVWDCGSPLYDSYELASLAHLIDRNLLAFPPPYHAGSRRITSNKVSHFHFSPFIP 60

Query: 61  SPPPTSAVTAMSLKKKPVG---QIKNKLKKLKTTVRLSAIFSRFGFSRKKQTQI 110
            PPP SAV   S KKKP      IKNK+KKLK+T R S+I S FGF RKKQ Q+
Sbjct: 61  -PPPPSAVNG-SFKKKPPAVDELIKNKIKKLKSTFRFSSISSGFGFWRKKQIQV 112

[Close]

BLAST of Tan0003026 vs. ExPASy TrEMBL
Match: A0A5D3D3M1 (Glycosyltransferase family 28 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G005310 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.4e-32
Identity = 81/114 (71.05%), Postives = 88/114 (77.19%), Query Frame = 0


Query: 1   MRENLSVWDCGSPLYDSYELASLAHLIDRNLMALPPPYHGGSRRFSSNKVS--HFSDFIP 60
           MR+  SVWDCGSPLYDSYELASLAHLIDRNL+A PPPYH GSRR +SNKVS  HFS FIP
Sbjct: 1   MRDQSSVWDCGSPLYDSYELASLAHLIDRNLLAFPPPYHAGSRRITSNKVSHFHFSPFIP 60

Query: 61  SPPPTSAVTAMSLKKKPVG---QIKNKLKKLKTTVRLSAIFSRFGFSRKKQTQI 110
            PPP SAV   S KKKP      IKNK+KKLK+T R S+I S FGF RKKQ Q+
Sbjct: 61  -PPPPSAVNG-SFKKKPPAVDELIKNKIKKLKSTFRFSSISSGFGFWRKKQIQV 112

[Close]

BLAST of Tan0003026 vs. ExPASy TrEMBL
Match: A0A2P6SIA6 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0358991 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.6e-10
Identity = 50/121 (41.32%), Postives = 66/121 (54.55%), Query Frame = 0


Query: 5   LSVWDCGSPLYDSYELASLAHLIDRNLMALPPPYHGGSRRFSSNKVSHFSDFIPSPPPTS 64
           L++WDCGSPLYDSYELAS++HLI+R+LMA  P   G S+RF + K SH S    +   ++
Sbjct: 15  LAIWDCGSPLYDSYELASVSHLIERHLMAF-PSLGGSSKRFIA-KFSHSSSSKTTSTTST 74

Query: 65  -------------------AVTAMSLKKKPVGQIKNKLKKLKTTVRLSAIFSRFGFSRKK 107
                               +  M  +K   G  K K KK+KTT   S  +SRFG  RKK
Sbjct: 75  TMKEAKGSDSMEENLSKILGIKKMWKRKGLFGATKEKTKKMKTT-GFSGFYSRFGLWRKK 132

[Close]

BLAST of Tan0003026 vs. ExPASy TrEMBL
Match: W9RN15 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_002759 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 2.0e-10
Identity = 51/115 (44.35%), Postives = 66/115 (57.39%), Query Frame = 0


Query: 5   LSVWDCGSPLYDSYELASLAHLIDRNLMALPPPYHGGSRRFSSNKVSHFSDFIPSPPP-- 64
           L++WDCGSPLYDSYEL SL+HLI+R+LM LP    GGSRRF+   +S FS  +   PP  
Sbjct: 21  LAIWDCGSPLYDSYELVSLSHLIERHLMILPS--LGGSRRFN---ISRFSRPVDVGPPMK 80

Query: 65  ------------TSAVTAMS-------LKKKPVGQIKNKLKKLKTTVRLSAIFSR 99
                       +S V ++S        K+K  GQ K K KK+K T  LS  ++R
Sbjct: 81  SNVGINTKVAKGSSMVASLSEFMERKMWKRKVFGQRKEKTKKMKIT-SLSGFYNR 129

[Close]

BLAST of Tan0003026 vs. TAIR 10
Match: AT3G61660.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46375.1); Has 28 Blast hits to 28 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 3.2e-08
Identity = 21/29 (72.41%), Postives = 26/29 (89.66%), Query Frame = 0


Query: 7  VWDCGSPLYDSYELASLAHLIDRNLMALP 36
          +WDCGSPLYDSYEL SL H+I+R+ M+LP
Sbjct: 9  LWDCGSPLYDSYELVSLTHIIERHFMSLP 37

[Close]

BLAST of Tan0003026 vs. TAIR 10
Match: AT2G46375.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61660.1); Has 12 Blast hits to 12 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 8.7e-06
Identity = 18/30 (60.00%), Postives = 21/30 (70.00%), Query Frame = 0


Query: 7  VWDCGSPLYDSYELASLAHLIDRNLMALPP 37
          +WDC S LYDSYEL S  H+I+R LM   P
Sbjct: 23 IWDCDSTLYDSYELVSFVHIIERKLMPFSP 52

[Close]

BLAST of Tan0003026 vs. TAIR 10
Match: AT1G64340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 1.6e-04
Identity = 32/86 (37.21%), Postives = 41/86 (47.67%), Query Frame = 0


Query: 3   ENLSVWDCGSPLYDSYELASLAHLIDRNLMALPPPYHGGSRRFSSNKVSHFSDFIPSPPP 62
           +N  VWDC S LYDS+EL S     +R L          +   SS+  S     + SPPP
Sbjct: 118 KNRKVWDCESTLYDSFELNS----FNRQL----------NSAISSSARSMSMPHLSSPPP 177

Query: 63  TSAVTAMSLKKK--PVGQIKNKLKKL 87
            S  T+ S KK+  P  +I   L KL
Sbjct: 178 PSETTSSSTKKQQSPTKKISRSLGKL 189

[Close]

BLAST of Tan0003026 vs. TAIR 10
Match: AT5G41810.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 876 Blast hits to 690 proteins in 132 species: Archae - 0; Bacteria - 38; Metazoa - 180; Fungi - 112; Plants - 59; Viruses - 2; Other Eukaryotes - 485 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 3.7e-04
Identity = 30/85 (35.29%), Postives = 43/85 (50.59%), Query Frame = 0


Query: 7   VWDCGSPLYDSYELASLAHLIDRNLMA----LPPPYHGGSRRFS--SNKVSHFSDFIPSP 66
           VWDCGS LYDS+EL S    +D  + A         H   RR    S+    +S  +P P
Sbjct: 122 VWDCGSTLYDSFELNSFKRQLDSAISASSARTMSMSHLPDRRIPSLSSLSPEYSPPLP-P 181

Query: 67  PPTSAVTAMSLKKKPVGQIKNKLKK 86
           PPT++ ++ S  KK   +I   L++
Sbjct: 182 PPTTSSSSSSGGKKHSNKISRSLQR 205

[Close]

BLAST of Tan0003026 vs. TAIR 10
Match: AT5G41810.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 514 Blast hits to 437 proteins in 98 species: Archae - 0; Bacteria - 21; Metazoa - 115; Fungi - 53; Plants - 52; Viruses - 5; Other Eukaryotes - 268 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 3.7e-04
Identity = 30/85 (35.29%), Postives = 43/85 (50.59%), Query Frame = 0


Query: 7   VWDCGSPLYDSYELASLAHLIDRNLMA----LPPPYHGGSRRFS--SNKVSHFSDFIPSP 66
           VWDCGS LYDS+EL S    +D  + A         H   RR    S+    +S  +P P
Sbjct: 113 VWDCGSTLYDSFELNSFKRQLDSAISASSARTMSMSHLPDRRIPSLSSLSPEYSPPLP-P 172

Query: 67  PPTSAVTAMSLKKKPVGQIKNKLKK 86
           PPT++ ++ S  KK   +I   L++
Sbjct: 173 PPTTSSSSSSGGKKHSNKISRSLQR 196

The following BLAST results are available for this feature:

BLAST of Tan0003026 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0003026 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650237.1	1.7e-32	67.86	hypothetical protein Csa_011169 [Cucumis sativus]	[more]
TYK17659.1	3.0e-32	71.05	glycosyltransferase family 28 protein [Cucumis melo var. makuwa]	[more]
KAA0048909.1	3.0e-32	71.05	glycosyltransferase family 28 protein [Cucumis melo var. makuwa]	[more]
KAG6597095.1	9.6e-31	68.27	Protein ENHANCED DISEASE RESISTANCE 4, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_031263278.1	1.9e-10	42.62	uncharacterized protein LOC116121461 [Pistacia vera]	[more]

BLAST of Tan0003026 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L377	8.5e-33	67.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119750 PE=4 SV=1	[more]
A0A5A7U611	1.4e-32	71.05	Glycosyltransferase family 28 protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5D3D3M1	1.4e-32	71.05	Glycosyltransferase family 28 protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A2P6SIA6	1.6e-10	41.32	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0358991 PE=4...	[more]
W9RN15	2.0e-10	44.35	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_002759 PE=4 SV=1	[more]

BLAST of Tan0003026 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61660.1	3.2e-08	72.41	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G46375.1	8.7e-06	60.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G64340.1	1.6e-04	37.21	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G41810.1	3.7e-04	35.29	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G41810.2	3.7e-04	35.29	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33978	SERINE/THREONINE-KINASE	coord: 3..105
None	No IPR available	PANTHER	PTHR33978:SF14	SUBFAMILY NOT NAMED	coord: 3..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0003026.1	Tan0003026.1	mRNA