Tan0002925 (gene) Snake gourd v1

Overview
NameTan0002925
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPentatricopeptide repeat (PPR) superfamily protein isoform 2
LocationLG01: 10579449 .. 10583715 (-)
RNA-Seq ExpressionTan0002925
SyntenyTan0002925
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATGAAACCTCCTTAATATTACGCGAACTCTCCACTGAAACGACGCCGTTGCTTCCCCTATATATACCCCCCTCCTTTGCCCTATTTTTCTACCCGAGTCTCATCTTCCTTCGGCGGTAAGCAATTGACTCTCCCGCGAAGCTCAGGAATTCTTCCTCTCTTTCGTTTAGGATCTTCGGAAGTTCTCTGCCCTAATCTTTCACTGGTGTTTCTCCGATCGTCTTATAGACCGAAGAATTTTCTTCTTGTCAAGTGGTAAGTTTTTTCTTCTCCGTTTGAATCTATGTTGCGTCGATCGAAACCCTAGATGTTTGTTTGCGATTTTTGTGGTCGTGTGTATGGATTTCCGTTCATGAATAGATTATTGTCGCTTAATTTATATCTTTATTTGTTATTAGGTCGAGGGCGAGGAGATTTCTTGGTTTTGTTAGGGTTTTATCGTTGAAGTTTTGTATTCGGTTGCGTTTGCTGTTTTTGTAATTCGGTGGGGGAGCCTAATTAGCCATGTTTTTTTCCCTGTTCTTTGATTTTCACGATGTAATTTCTTTTCTTCCGGTTATTCTGAGATTTTCTTGAGACCTTGGAAGTATATTGTATCTATTGACAACCTTTATTTCTGAAACCGATACAGAAACCTGAATGGTTTCGTTAAGTTTCAGATGTTATCCGTCTAAATTTACGTTATAGACATCTATTACTTAAGGTGGTGAGGCACTGCTTGATTTTGTTCGATTTAGACCTAAAAGTGTGCCACCTTGTTGCCTATTGTTTCTGCTGTTGAGGATTGTCTACTTACGAGTTTCTTCTGACTGTTTCTTTCTGTAGACCACTTACTATCAATTTTTGTTTAATTTTATGTCAGATGGCGGCTAAACCACTTACTACTGAGGCAATTGCCATAACTGAGAAGAAGATGGACATGGCCTTAGGTTGCACTTCTGAAATTCTTGCATCAGTACTTCCGAGTTTATGTGCCTCTTGAAAATTCATTAATTATTTTTTGTTTACATATTTTTCTTCAATTAGATGACATTATCAAAATGTCCAAAAATTCTGGGAATAAAGCCAGGAAGCAAAGAAGGTTTCCGGTAAGAACCTGTTTTCGTTAGCATGTCTTTAACCTGAGTAATTTATTGTCGAAGTTGGAAGTTTCCTTTTTATCATAATGTATAATGATTTATCTTTTATATGCAGAACAAAGTGCAGAAATTCCCAAATCATGCTGCTCAAGATAGACCTAGGAAGTTGCAGCGTTTCACGGACTCAAGATCTTCCCTAAGACAGGTTTGTGCAATTATATTAACTTGAATATGATTTTTTTTTTTGGCTTAGTTTGTATGGTTGGTTCTAAATTTTCATTTTGTTTAGGGGGCTTTGGCTAAAAGAAGGTCAAATTTTCAAGGGAATCAGTTTGCTTTGGCAACTGAGGTTGCAAGAAAGGCTGCAGTTGCTCCAATTCGGCCTAGAGTTTTTAACCGTAGGGCACCCAATTGGAATAAGACAAGGTATTGGAGGTTCTCATTGTGAATTATGATTATATGTGTTACCTCAATTCTGGCAACCCTCTGGAACTATAAGAGAAATGTTTACAGAAGAACATTTGAAATTGGTGGCTGGTTGGTTTAATGTGATATTTGATGTTATGGCAGGTAAATCACATTTATTCAAAATTGATGACTTCTCCATCAAGTTTTACAATATGAAGTTAGCGAAGTAATTTGTTGGTTGGAACAACTGTGTGATAAGTTTTTGCTTCAACCTGTTGAAATGGGAGTGGGAGTATTTCCAATTATTTCGTTTCTTCCATGCTGCCTGGGAATTGATTCTGCTTTATCTTCTTAAGTATGGTTTTGGAATGCATCGAGTAATCTTTTGGTTGTCTGATGACTAAGTGATTGATGGGAGTCTACAGAAAGTGGGACAATGATAATTTGGAATTTTGAATGAATTTGACTGCTGCAACCATTTGGAAAAATGTAGTAAAAGGAGCTTTTGTGTGCATTGGATGGGTGTGTATAGTTTTGCGTTTTTGCTCCTTACTAAATGTGTTTATTGTCTTGGATTACTCAATTCTTCATAGACAATGCATAACATTAGAGCAGCCTCAGCCAGTTACCCTTTGGAAGCTGCTTTGTAAGATGTGATGTTTTAACACACCAGAGGATTAAGATGGGGCACCATCCTTTAATCATTATTCCACAATTGTCTTGTTCACCATTCTCAAAGTCTGCTGTGGTTAACTTCCATTCCTGGAGGATGACAATTGACATATCTCCATTTGCTTTCGTTAATCCATGCAAAGAATCAAGGAGGCTGTGGTGATGTCAAATTTGCTCATCTTTTAATCCTTCTAGTGAACCGTATGCTAGTTTCCTTGATTCCTCTTGGTGTTTCCCTCATTCACCATCACTTCCTGGAAACATTAGCCACCCCTCCAACTTCCTTGTTTTGATAAATTTCCAAGTTCGCATCTTGTTGGCTAACCATAGAACTGCAAATGAGTTAGCCCTTGACTCTGGATAATTTTCCACTTCTGAACAAAAATGCTTCCTTTAATTCCTCTAGTCAGTATGGCCAGTGGAAGATGTTATTTCATCATCTTTAAAAGAAGAACCATGGGGTGGAATTGAAATATAGTTTGTTGCAAGTGAAACAAGAACTCTGTACTTCTGGTAATTTTGTCATTACATAATCATGTGATAACAAAAGTGCTGAAGAAATTATGTATGGTTAGTTAAAATGTGTTGAACATTGGCATTTATGGCTTCTTCTATGAGGTATTATATAGATTTTGGGTCTTATCAGAGTGGAAAACCCTAGTACTGCATAAGTTCATGCTGCTGCCGTTTTTCAATCATATGCTGGTTGAAGCCTTCATTTTCTGGTTCAAGTTCCGGACATGAATTTCTCTGGAGTAGATTAACTGTTCATTTGTAGTACTAGATTGGAGCTTTTGTTGTTGTGCATTAAAGCAAGCAAAGCATCCGGTGATTGATTTGAGGTTTGGGGTCTTGCTATATTATCGGAAAGTGCTTTTTTGGATCGAATCAAGCGAAACACATTTTGAGCTGATTCACATTTTTTGATGACTGCATTCTCCTGATCTGGTTTGTCTTTTATTTCTGTTGTTGGGTTCCGTTTGAATTTGCTCGTGGAGGTAAGATACTCTGATCTATCTGCATCCTACTCACTCGAGGACATGATGATTCATGAAGATTACTGGTGTTTGTAAAATTCTAATATAGTAACTTGTTTGACCTAGCAGGGTCTGTATATAAATGATATTTATTATGTTCTTCAATCATTTCAACCATTCTTGGTACAGGGTTGAAGCTCCACCCGTTCAGAGGAAGCCATTTACTAATGGAAACTTCATTCCCAAGGTACTACGTTCTTTCTGAGGTGGTCAGAATGCATTTTCTCGCATCTTTATTTGCAACAAATTCTTCTTAGTGCAGTAATTGTTGTTTAGCATTTACTGGTTTCTCTACTGAGCGTTTAATTCACTATAATTGCCAAAATGTATATTTATTTTCGAAAGCAGGATGTGTACTTGTTTTCTATCAGAGGTCTAGAGAAAGTGGCTCATCAATAAAGAAGATGAATTTAAGTCTGGATCACAGCAGTCTGATCTCTTTTATTTGTCCCGTCTTCCTTCTGCAGGTAGCTGCACCATCCCAACCACAAACAAATGCTATGCCGAGACAGAAGCCACAGACGCTCGACTCACTGTTTGCCAACATGAAGGAACAGAGGCTGAGGGCTTTGTCGCAGCGACAAAATGGTGCTGCACAGCAACGGAATGGTGGTCGCCAGCAAAGACCTCCCTGGGGAAGAGCCCGTTTTGGTAACTGAAGGATACACGCAAAGAAACTTCGTGCGATGGATGAGTATTAGTGTGGGAAATGTAGATGTTGCCTGCTTGTCCACGGTGCCCGATAGCTGATAGGGGATTAAAAGGTTTCTTTTTGTCATTTTTTTTAACCCAAACCTTTGGCTTGTTGTTTTAGCATTTTTCAAGCTTCATTAAGGACCGAAAACTATAGATTTGTATTTTGTACCCGTTCATGTAAAGGTTCTTACTTTTTTCTCCTTTTTAGTTCACTTTCTTCCCTCGTGACCTAATTTCTCAACTTGTTATGTTAAATCCCATTTACACTGCCGGCCCCTCGGCAGCTCTGCTTGTTCTTTGACTTGTACATATTGTAGCGAATAAATACCAGTTGATGTGCCGTTTGATTGCTTACAACATATAATTTATATTTCA

mRNA sequence

AATGAAACCTCCTTAATATTACGCGAACTCTCCACTGAAACGACGCCGTTGCTTCCCCTATATATACCCCCCTCCTTTGCCCTATTTTTCTACCCGAGTCTCATCTTCCTTCGGCGGTAAGCAATTGACTCTCCCGCGAAGCTCAGGAATTCTTCCTCTCTTTCGTTTAGGATCTTCGGAAGTTCTCTGCCCTAATCTTTCACTGGTGTTTCTCCGATCGTCTTATAGACCGAAGAATTTTCTTCTTGTCAAGTGATGGCGGCTAAACCACTTACTACTGAGGCAATTGCCATAACTGAGAAGAAGATGGACATGGCCTTAGATGACATTATCAAAATGTCCAAAAATTCTGGGAATAAAGCCAGGAAGCAAAGAAGGTTTCCGAACAAAGTGCAGAAATTCCCAAATCATGCTGCTCAAGATAGACCTAGGAAGTTGCAGCGTTTCACGGACTCAAGATCTTCCCTAAGACAGGGGGCTTTGGCTAAAAGAAGGTCAAATTTTCAAGGGAATCAGTTTGCTTTGGCAACTGAGGTTGCAAGAAAGGCTGCAGTTGCTCCAATTCGGCCTAGAGTTTTTAACCGTAGGGCACCCAATTGGAATAAGACAAGGGTTGAAGCTCCACCCGTTCAGAGGAAGCCATTTACTAATGGAAACTTCATTCCCAAGGTAGCTGCACCATCCCAACCACAAACAAATGCTATGCCGAGACAGAAGCCACAGACGCTCGACTCACTGTTTGCCAACATGAAGGAACAGAGGCTGAGGGCTTTGTCGCAGCGACAAAATGGTGCTGCACAGCAACGGAATGGTGGTCGCCAGCAAAGACCTCCCTGGGGAAGAGCCCGTTTTGGTAACTGAAGGATACACGCAAAGAAACTTCGTGCGATGGATGAGTATTAGTGTGGGAAATGTAGATGTTGCCTGCTTGTCCACGGTGCCCGATAGCTGATAGGGGATTAAAAGGTTTCTTTTTGTCATTTTTTTTAACCCAAACCTTTGGCTTGTTGTTTTAGCATTTTTCAAGCTTCATTAAGGACCGAAAACTATAGATTTGTATTTTGTACCCGTTCATGTAAAGGTTCTTACTTTTTTCTCCTTTTTAGTTCACTTTCTTCCCTCGTGACCTAATTTCTCAACTTGTTATGTTAAATCCCATTTACACTGCCGGCCCCTCGGCAGCTCTGCTTGTTCTTTGACTTGTACATATTGTAGCGAATAAATACCAGTTGATGTGCCGTTTGATTGCTTACAACATATAATTTATATTTCA

Coding sequence (CDS)

ATGGCGGCTAAACCACTTACTACTGAGGCAATTGCCATAACTGAGAAGAAGATGGACATGGCCTTAGATGACATTATCAAAATGTCCAAAAATTCTGGGAATAAAGCCAGGAAGCAAAGAAGGTTTCCGAACAAAGTGCAGAAATTCCCAAATCATGCTGCTCAAGATAGACCTAGGAAGTTGCAGCGTTTCACGGACTCAAGATCTTCCCTAAGACAGGGGGCTTTGGCTAAAAGAAGGTCAAATTTTCAAGGGAATCAGTTTGCTTTGGCAACTGAGGTTGCAAGAAAGGCTGCAGTTGCTCCAATTCGGCCTAGAGTTTTTAACCGTAGGGCACCCAATTGGAATAAGACAAGGGTTGAAGCTCCACCCGTTCAGAGGAAGCCATTTACTAATGGAAACTTCATTCCCAAGGTAGCTGCACCATCCCAACCACAAACAAATGCTATGCCGAGACAGAAGCCACAGACGCTCGACTCACTGTTTGCCAACATGAAGGAACAGAGGCTGAGGGCTTTGTCGCAGCGACAAAATGGTGCTGCACAGCAACGGAATGGTGGTCGCCAGCAAAGACCTCCCTGGGGAAGAGCCCGTTTTGGTAACTGA

Protein sequence

MAAKPLTTEAIAITEKKMDMALDDIIKMSKNSGNKARKQRRFPNKVQKFPNHAAQDRPRKLQRFTDSRSSLRQGALAKRRSNFQGNQFALATEVARKAAVAPIRPRVFNRRAPNWNKTRVEAPPVQRKPFTNGNFIPKVAAPSQPQTNAMPRQKPQTLDSLFANMKEQRLRALSQRQNGAAQQRNGGRQQRPPWGRARFGN
Homology
BLAST of Tan0002925 vs. NCBI nr
Match: XP_022941743.1 (uncharacterized protein LOC111447019 isoform X1 [Cucurbita moschata] >XP_022941744.1 uncharacterized protein LOC111447019 isoform X1 [Cucurbita moschata] >XP_022941747.1 uncharacterized protein LOC111447019 isoform X1 [Cucurbita moschata])

HSP 1 Score: 339.7 bits (870), Expect = 1.7e-89
Identity = 176/201 (87.56%), Postives = 183/201 (91.04%), Query Frame = 0

Query: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNSGNKARKQRRFPNKVQKFPNHAAQDRPRK 60
           MAAKPLTTEAIAITEKKMDMALDDIIKMSKN+GNK RKQRRFPNK+QKFPN+A QDRPRK
Sbjct: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60

Query: 61  LQRFTDSRSSLRQGALAKRRSNFQGNQFALATEVARKAAVAPIRPRVFNRRAPNWNKTRV 120
           LQRF D+R+SLRQGALAKRRSNFQGNQFALATEVAR AAVAPIRPR FNRR PNW KTRV
Sbjct: 61  LQRFMDARTSLRQGALAKRRSNFQGNQFALATEVARTAAVAPIRPRAFNRRVPNWKKTRV 120

Query: 121 EAPPVQRKPFTNGNFIPKVAAPSQPQTNAMPRQKPQTLDSLFANMKEQRLRALSQRQNGA 180
           EAPPVQRKPF NG FIPK+ AP Q QTNA PRQ+PQTLDSLFANMKEQRLR LSQRQNG 
Sbjct: 121 EAPPVQRKPFNNGTFIPKITAPVQTQTNATPRQRPQTLDSLFANMKEQRLRVLSQRQNGG 180

Query: 181 AQQRNGGRQQRPPWGRARFGN 202
           AQQRNG RQQRPPWGR R GN
Sbjct: 181 AQQRNGARQQRPPWGRGRIGN 201

BLAST of Tan0002925 vs. NCBI nr
Match: XP_022982836.1 (uncharacterized protein LOC111481570 isoform X1 [Cucurbita maxima] >XP_022982844.1 uncharacterized protein LOC111481570 isoform X1 [Cucurbita maxima] >XP_022982853.1 uncharacterized protein LOC111481570 isoform X1 [Cucurbita maxima])

HSP 1 Score: 338.6 bits (867), Expect = 3.7e-89
Identity = 176/201 (87.56%), Postives = 182/201 (90.55%), Query Frame = 0

Query: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNSGNKARKQRRFPNKVQKFPNHAAQDRPRK 60
           MA KPLTTEAIAITEKKMDMALDDIIKMSKN+GNK RKQRRFPNK+QKFPN+A QDRPRK
Sbjct: 1   MATKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60

Query: 61  LQRFTDSRSSLRQGALAKRRSNFQGNQFALATEVARKAAVAPIRPRVFNRRAPNWNKTRV 120
           LQRF D+R+SLRQGA AKRRSNFQGNQFALATEVARKAAVAPIRPR FNR  PNW KTRV
Sbjct: 61  LQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFNRWVPNWKKTRV 120

Query: 121 EAPPVQRKPFTNGNFIPKVAAPSQPQTNAMPRQKPQTLDSLFANMKEQRLRALSQRQNGA 180
           EAPPVQRKPF NG FIPK+AAP Q QTNA PRQKPQTLDSLFANMKEQRLR LSQRQNG 
Sbjct: 121 EAPPVQRKPFNNGTFIPKIAAPVQTQTNATPRQKPQTLDSLFANMKEQRLRVLSQRQNGG 180

Query: 181 AQQRNGGRQQRPPWGRARFGN 202
           AQQRNG RQQRPPWGR R GN
Sbjct: 181 AQQRNGARQQRPPWGRGRIGN 201

BLAST of Tan0002925 vs. NCBI nr
Match: KAG7031152.1 (hypothetical protein SDJN02_05192, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 335.1 bits (858), Expect = 4.1e-88
Identity = 174/201 (86.57%), Postives = 181/201 (90.05%), Query Frame = 0

Query: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNSGNKARKQRRFPNKVQKFPNHAAQDRPRK 60
           MAAKPLTTEAIAITEKKMDMALDDIIKMSKN+GNK RKQRRFPNK+QKFPN+A QDRPRK
Sbjct: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60

Query: 61  LQRFTDSRSSLRQGALAKRRSNFQGNQFALATEVARKAAVAPIRPRVFNRRAPNWNKTRV 120
           LQRF D+R+SLRQGALAKRRSNFQGNQFALATEVAR AAVAPIRPR FNRR PNW KTRV
Sbjct: 61  LQRFMDARTSLRQGALAKRRSNFQGNQFALATEVARTAAVAPIRPRAFNRRVPNWKKTRV 120

Query: 121 EAPPVQRKPFTNGNFIPKVAAPSQPQTNAMPRQKPQTLDSLFANMKEQRLRALSQRQNGA 180
           EAPPVQRKPF NG FIPK+ AP Q Q NA PRQ+PQTLDSLFANMKEQRLR LSQRQNG 
Sbjct: 121 EAPPVQRKPFNNGTFIPKITAPVQTQPNATPRQRPQTLDSLFANMKEQRLRVLSQRQNGV 180

Query: 181 AQQRNGGRQQRPPWGRARFGN 202
           AQQRNG RQQRPPWGR R  N
Sbjct: 181 AQQRNGSRQQRPPWGRGRIAN 201

BLAST of Tan0002925 vs. NCBI nr
Match: KAG6600514.1 (Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 335.1 bits (858), Expect = 4.1e-88
Identity = 174/201 (86.57%), Postives = 181/201 (90.05%), Query Frame = 0

Query: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNSGNKARKQRRFPNKVQKFPNHAAQDRPRK 60
           MAAKPLTTEAIAITEKKMDMALDDIIKMSKN+GNK RKQRRFPNK+QKFPN+A QDRPRK
Sbjct: 291 MAAKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 350

Query: 61  LQRFTDSRSSLRQGALAKRRSNFQGNQFALATEVARKAAVAPIRPRVFNRRAPNWNKTRV 120
           LQRF D+R+SLRQGALAKRRSNFQGNQFALATEVAR AAVAPIRPR FNRR PNW KTRV
Sbjct: 351 LQRFMDARTSLRQGALAKRRSNFQGNQFALATEVARTAAVAPIRPRAFNRRVPNWKKTRV 410

Query: 121 EAPPVQRKPFTNGNFIPKVAAPSQPQTNAMPRQKPQTLDSLFANMKEQRLRALSQRQNGA 180
           EAPPVQRKPF NG FIPK+ AP Q Q NA PRQ+PQTLDSLFANMKEQRLR LSQRQNG 
Sbjct: 411 EAPPVQRKPFNNGTFIPKITAPVQTQPNATPRQRPQTLDSLFANMKEQRLRVLSQRQNGV 470

Query: 181 AQQRNGGRQQRPPWGRARFGN 202
           AQQRNG RQQRPPWGR R  N
Sbjct: 471 AQQRNGSRQQRPPWGRGRIAN 491

BLAST of Tan0002925 vs. NCBI nr
Match: XP_023528268.1 (uncharacterized protein LOC111791234 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023528276.1 uncharacterized protein LOC111791234 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 334.7 bits (857), Expect = 5.4e-88
Identity = 174/201 (86.57%), Postives = 182/201 (90.55%), Query Frame = 0

Query: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNSGNKARKQRRFPNKVQKFPNHAAQDRPRK 60
           MAAKPLTTEAIAITEKKMDMALDDIIKMSKN+G+K RKQRRFPNK+QKFPN+A QDRPRK
Sbjct: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNTGSKGRKQRRFPNKMQKFPNNATQDRPRK 60

Query: 61  LQRFTDSRSSLRQGALAKRRSNFQGNQFALATEVARKAAVAPIRPRVFNRRAPNWNKTRV 120
           LQRF D+R+SLRQGALAKRRSNFQGNQFALATEVAR AAVAPIRPR FNRR PNW KTRV
Sbjct: 61  LQRFMDARTSLRQGALAKRRSNFQGNQFALATEVARTAAVAPIRPRAFNRRVPNWKKTRV 120

Query: 121 EAPPVQRKPFTNGNFIPKVAAPSQPQTNAMPRQKPQTLDSLFANMKEQRLRALSQRQNGA 180
           EAPPVQRKP  NG FIPK+ AP Q QTNA PRQ+PQTLDSLFANMKEQRLR LSQRQNG 
Sbjct: 121 EAPPVQRKPSNNGTFIPKITAPVQTQTNATPRQRPQTLDSLFANMKEQRLRVLSQRQNGG 180

Query: 181 AQQRNGGRQQRPPWGRARFGN 202
           AQQRNG RQQRPPWGR R GN
Sbjct: 181 AQQRNGSRQQRPPWGRGRIGN 201

BLAST of Tan0002925 vs. ExPASy TrEMBL
Match: A0A6J1FPB6 (uncharacterized protein LOC111447019 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447019 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.1e-90
Identity = 176/201 (87.56%), Postives = 183/201 (91.04%), Query Frame = 0

Query: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNSGNKARKQRRFPNKVQKFPNHAAQDRPRK 60
           MAAKPLTTEAIAITEKKMDMALDDIIKMSKN+GNK RKQRRFPNK+QKFPN+A QDRPRK
Sbjct: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60

Query: 61  LQRFTDSRSSLRQGALAKRRSNFQGNQFALATEVARKAAVAPIRPRVFNRRAPNWNKTRV 120
           LQRF D+R+SLRQGALAKRRSNFQGNQFALATEVAR AAVAPIRPR FNRR PNW KTRV
Sbjct: 61  LQRFMDARTSLRQGALAKRRSNFQGNQFALATEVARTAAVAPIRPRAFNRRVPNWKKTRV 120

Query: 121 EAPPVQRKPFTNGNFIPKVAAPSQPQTNAMPRQKPQTLDSLFANMKEQRLRALSQRQNGA 180
           EAPPVQRKPF NG FIPK+ AP Q QTNA PRQ+PQTLDSLFANMKEQRLR LSQRQNG 
Sbjct: 121 EAPPVQRKPFNNGTFIPKITAPVQTQTNATPRQRPQTLDSLFANMKEQRLRVLSQRQNGG 180

Query: 181 AQQRNGGRQQRPPWGRARFGN 202
           AQQRNG RQQRPPWGR R GN
Sbjct: 181 AQQRNGARQQRPPWGRGRIGN 201

BLAST of Tan0002925 vs. ExPASy TrEMBL
Match: A0A6J1J5N5 (uncharacterized protein LOC111481570 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481570 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.8e-89
Identity = 176/201 (87.56%), Postives = 182/201 (90.55%), Query Frame = 0

Query: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNSGNKARKQRRFPNKVQKFPNHAAQDRPRK 60
           MA KPLTTEAIAITEKKMDMALDDIIKMSKN+GNK RKQRRFPNK+QKFPN+A QDRPRK
Sbjct: 1   MATKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRFPNKMQKFPNNATQDRPRK 60

Query: 61  LQRFTDSRSSLRQGALAKRRSNFQGNQFALATEVARKAAVAPIRPRVFNRRAPNWNKTRV 120
           LQRF D+R+SLRQGA AKRRSNFQGNQFALATEVARKAAVAPIRPR FNR  PNW KTRV
Sbjct: 61  LQRFMDARTSLRQGAFAKRRSNFQGNQFALATEVARKAAVAPIRPRAFNRWVPNWKKTRV 120

Query: 121 EAPPVQRKPFTNGNFIPKVAAPSQPQTNAMPRQKPQTLDSLFANMKEQRLRALSQRQNGA 180
           EAPPVQRKPF NG FIPK+AAP Q QTNA PRQKPQTLDSLFANMKEQRLR LSQRQNG 
Sbjct: 121 EAPPVQRKPFNNGTFIPKIAAPVQTQTNATPRQKPQTLDSLFANMKEQRLRVLSQRQNGG 180

Query: 181 AQQRNGGRQQRPPWGRARFGN 202
           AQQRNG RQQRPPWGR R GN
Sbjct: 181 AQQRNGARQQRPPWGRGRIGN 201

BLAST of Tan0002925 vs. ExPASy TrEMBL
Match: A0A6J1C7V3 (uncharacterized protein LOC111008218 OS=Momordica charantia OX=3673 GN=LOC111008218 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.4e-86
Identity = 176/205 (85.85%), Postives = 184/205 (89.76%), Query Frame = 0

Query: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNSGNKARKQRRFPNKVQKFPNHAAQDRPRK 60
           MAAKPLTTEAIAITEKKMDMALDDIIKMSKN+GNK RKQRR PNK QKFPN+A QDRPRK
Sbjct: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKTRKQRRLPNKTQKFPNNATQDRPRK 60

Query: 61  LQRFTDSRSSLRQGALAKRRSNFQGNQFALATEVARKAAVAPIRPRVFNRRAPNWNKTRV 120
           LQRF DSRSSLRQGALAK+RSNFQGNQF LA EVARKAAVAPIRPR FNRRAPNW+KTR 
Sbjct: 61  LQRFMDSRSSLRQGALAKKRSNFQGNQFPLAAEVARKAAVAPIRPRGFNRRAPNWSKTRF 120

Query: 121 EAPPVQRKPFTNGNFIPKV--AAPSQPQTNAMPRQKPQTLDSLFANMKEQRLRALSQRQ- 180
           +APPVQRKPFTNG FIPKV  AA +QPQTN MPRQ+PQTLDSLFANMKEQRLR LSQRQ 
Sbjct: 121 DAPPVQRKPFTNGTFIPKVAIAARAQPQTNTMPRQRPQTLDSLFANMKEQRLRVLSQRQN 180

Query: 181 -NGAAQQRNGGRQQRPPWGRARFGN 202
            NGA Q+  GGRQQRPPWGR RFGN
Sbjct: 181 GNGAPQRNGGGRQQRPPWGRGRFGN 205

BLAST of Tan0002925 vs. ExPASy TrEMBL
Match: A0A0A0KUX2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052600 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 5.5e-86
Identity = 176/202 (87.13%), Postives = 184/202 (91.09%), Query Frame = 0

Query: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNSGNKARKQRRFPNKVQKFPNHAAQDRPRK 60
           MAAKPLTTEAIAITEKKMDMALDDIIKMSKN+GNK RKQRR PNK+QKFPN+A QDRPRK
Sbjct: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRLPNKMQKFPNNATQDRPRK 60

Query: 61  LQRFTDSRSSLRQGALAKRRSNFQGNQFALATEVARKAAVAPIRPRVFNRRAPNWNKTRV 120
           LQRF DSRSSLRQGALA RRSNFQGNQF LATEVARKAAVAPIRPR F RRAPNWNKTRV
Sbjct: 61  LQRFMDSRSSLRQGALANRRSNFQGNQFPLATEVARKAAVAPIRPRAFTRRAPNWNKTRV 120

Query: 121 EA-PPVQRKPFTNGNFIPKVAAPSQPQTNAMPRQKPQTLDSLFANMKEQRLRALSQRQN- 180
           EA PPV RKPFTNGNF+PKV+AP+QPQTN  PRQ+PQTLDSLFANMKEQRLR LSQRQN 
Sbjct: 121 EAHPPVPRKPFTNGNFVPKVSAPAQPQTNTTPRQRPQTLDSLFANMKEQRLRVLSQRQNG 180

Query: 181 GAAQQRNGGR-QQRPPWGRARF 200
           G AQQRNGGR QQRPPWG+  F
Sbjct: 181 GGAQQRNGGRQQQRPPWGKRPF 202

BLAST of Tan0002925 vs. ExPASy TrEMBL
Match: A0A5A7TPS5 (Pentatricopeptide repeat (PPR) superfamily protein isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001910 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 2.1e-85
Identity = 174/204 (85.29%), Postives = 184/204 (90.20%), Query Frame = 0

Query: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNSGNKARKQRRFPNKVQKFPNHAAQDRPRK 60
           MAAKPLTTEAIAITEKKMDMALDDIIKMSKN+GNK RKQRR PNK+QKFPN+A QDRPRK
Sbjct: 1   MAAKPLTTEAIAITEKKMDMALDDIIKMSKNTGNKGRKQRRLPNKMQKFPNNATQDRPRK 60

Query: 61  LQRFTDSRSSLRQGALAKRRSNFQGNQFALATEVARKAAVAPIRPRVFNRRAPNWNKTRV 120
           LQRF DSRSSLRQGALA RRSNFQGNQFALATEVARKAAVAPIRPR F RRAPNWNKTRV
Sbjct: 61  LQRFMDSRSSLRQGALANRRSNFQGNQFALATEVARKAAVAPIRPRAFTRRAPNWNKTRV 120

Query: 121 EA-PPVQRKPFTNGNFIPKVAAPSQPQTNAMPRQKPQTLDSLFANMKEQRLRALSQRQN- 180
           +A PPV +K FTNGNF+PKV+AP+Q QTNA PRQ+PQTLDSLFANMKEQRLR LSQRQN 
Sbjct: 121 DAPPPVPKKSFTNGNFVPKVSAPAQQQTNATPRQRPQTLDSLFANMKEQRLRVLSQRQNG 180

Query: 181 ---GAAQQRNGGRQQRPPWGRARF 200
              GA QQRNGGRQQRPPWG+  F
Sbjct: 181 GGGGAQQQRNGGRQQRPPWGKRPF 204

BLAST of Tan0002925 vs. TAIR 10
Match: AT4G10970.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 132.9 bits (333), Expect = 2.9e-31
Identity = 104/215 (48.37%), Postives = 131/215 (60.93%), Query Frame = 0

Query: 4   KPLTTEAIAITEKKMDMALDDIIKMSKNSGNKAR-KQRRFPNKVQKFPNHAAQDRPRKLQ 63
           KP+TTE +A+TEKKMDM+LD+IIKM K++ N  + K++R  NK +KF + AA++   K Q
Sbjct: 5   KPITTETVALTEKKMDMSLDEIIKMEKSNTNVNKGKKQRVLNKKEKF-SGAAKNSAVKAQ 64

Query: 64  RFTDSRSSLRQGALAKRRSNFQGNQFALATEVARKAAVAPIRPRVFN-RRAPNWNKTRVE 123
           R+ DSRS +RQGA AK+RSNFQGNQF + T VARKAA A  R R +N  R  N N++R  
Sbjct: 65  RYMDSRSDVRQGAFAKKRSNFQGNQFPVTTTVARKAASATPRGRPYNGGRMTNTNQSRFI 124

Query: 124 APPVQRKPFTNGNFIPKVAAPS-----QPQTN---AMPRQKPQTLDSLFANMKEQRLRAL 183
           APP Q +    G F+ K          Q Q N      RQ PQTLDS FANMKE+R+R  
Sbjct: 125 APPAQNRASQRG-FVGKQQQQQREKIVQQQANGGGGGQRQWPQTLDSRFANMKEERMRMR 184

Query: 184 SQRQNGAAQQRNGG---RQQRP--PWGR--ARFGN 202
               N +    NG    +QQR   PW R   RF N
Sbjct: 185 RFADNRSNVGNNGAGSHQQQRSMVPWVRRATRFPN 217

BLAST of Tan0002925 vs. TAIR 10
Match: AT4G10970.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 132.9 bits (333), Expect = 2.9e-31
Identity = 104/215 (48.37%), Postives = 131/215 (60.93%), Query Frame = 0

Query: 4   KPLTTEAIAITEKKMDMALDDIIKMSKNSGNKAR-KQRRFPNKVQKFPNHAAQDRPRKLQ 63
           KP+TTE +A+TEKKMDM+LD+IIKM K++ N  + K++R  NK +KF + AA++   K Q
Sbjct: 5   KPITTETVALTEKKMDMSLDEIIKMEKSNTNVNKGKKQRVLNKKEKF-SGAAKNSAVKAQ 64

Query: 64  RFTDSRSSLRQGALAKRRSNFQGNQFALATEVARKAAVAPIRPRVFN-RRAPNWNKTRVE 123
           R+ DSRS +RQGA AK+RSNFQGNQF + T VARKAA A  R R +N  R  N N++R  
Sbjct: 65  RYMDSRSDVRQGAFAKKRSNFQGNQFPVTTTVARKAASATPRGRPYNGGRMTNTNQSRFI 124

Query: 124 APPVQRKPFTNGNFIPKVAAPS-----QPQTN---AMPRQKPQTLDSLFANMKEQRLRAL 183
           APP Q +    G F+ K          Q Q N      RQ PQTLDS FANMKE+R+R  
Sbjct: 125 APPAQNRASQRG-FVGKQQQQQREKIVQQQANGGGGGQRQWPQTLDSRFANMKEERMRMR 184

Query: 184 SQRQNGAAQQRNGG---RQQRP--PWGR--ARFGN 202
               N +    NG    +QQR   PW R   RF N
Sbjct: 185 RFADNRSNVGNNGAGSHQQQRSMVPWVRRATRFPN 217

BLAST of Tan0002925 vs. TAIR 10
Match: AT4G10970.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 132.9 bits (333), Expect = 2.9e-31
Identity = 104/215 (48.37%), Postives = 131/215 (60.93%), Query Frame = 0

Query: 4   KPLTTEAIAITEKKMDMALDDIIKMSKNSGNKAR-KQRRFPNKVQKFPNHAAQDRPRKLQ 63
           KP+TTE +A+TEKKMDM+LD+IIKM K++ N  + K++R  NK +KF + AA++   K Q
Sbjct: 5   KPITTETVALTEKKMDMSLDEIIKMEKSNTNVNKGKKQRVLNKKEKF-SGAAKNSAVKAQ 64

Query: 64  RFTDSRSSLRQGALAKRRSNFQGNQFALATEVARKAAVAPIRPRVFN-RRAPNWNKTRVE 123
           R+ DSRS +RQGA AK+RSNFQGNQF + T VARKAA A  R R +N  R  N N++R  
Sbjct: 65  RYMDSRSDVRQGAFAKKRSNFQGNQFPVTTTVARKAASATPRGRPYNGGRMTNTNQSRFI 124

Query: 124 APPVQRKPFTNGNFIPKVAAPS-----QPQTN---AMPRQKPQTLDSLFANMKEQRLRAL 183
           APP Q +    G F+ K          Q Q N      RQ PQTLDS FANMKE+R+R  
Sbjct: 125 APPAQNRASQRG-FVGKQQQQQREKIVQQQANGGGGGQRQWPQTLDSRFANMKEERMRMR 184

Query: 184 SQRQNGAAQQRNGG---RQQRP--PWGR--ARFGN 202
               N +    NG    +QQR   PW R   RF N
Sbjct: 185 RFADNRSNVGNNGAGSHQQQRSMVPWVRRATRFPN 217

BLAST of Tan0002925 vs. TAIR 10
Match: AT4G10970.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 132.9 bits (333), Expect = 2.9e-31
Identity = 104/215 (48.37%), Postives = 131/215 (60.93%), Query Frame = 0

Query: 4   KPLTTEAIAITEKKMDMALDDIIKMSKNSGNKAR-KQRRFPNKVQKFPNHAAQDRPRKLQ 63
           KP+TTE +A+TEKKMDM+LD+IIKM K++ N  + K++R  NK +KF + AA++   K Q
Sbjct: 5   KPITTETVALTEKKMDMSLDEIIKMEKSNTNVNKGKKQRVLNKKEKF-SGAAKNSAVKAQ 64

Query: 64  RFTDSRSSLRQGALAKRRSNFQGNQFALATEVARKAAVAPIRPRVFN-RRAPNWNKTRVE 123
           R+ DSRS +RQGA AK+RSNFQGNQF + T VARKAA A  R R +N  R  N N++R  
Sbjct: 65  RYMDSRSDVRQGAFAKKRSNFQGNQFPVTTTVARKAASATPRGRPYNGGRMTNTNQSRFI 124

Query: 124 APPVQRKPFTNGNFIPKVAAPS-----QPQTN---AMPRQKPQTLDSLFANMKEQRLRAL 183
           APP Q +    G F+ K          Q Q N      RQ PQTLDS FANMKE+R+R  
Sbjct: 125 APPAQNRASQRG-FVGKQQQQQREKIVQQQANGGGGGQRQWPQTLDSRFANMKEERMRMR 184

Query: 184 SQRQNGAAQQRNGG---RQQRP--PWGR--ARFGN 202
               N +    NG    +QQR   PW R   RF N
Sbjct: 185 RFADNRSNVGNNGAGSHQQQRSMVPWVRRATRFPN 217

BLAST of Tan0002925 vs. TAIR 10
Match: AT4G10970.5 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 52 Blast hits to 51 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 102.4 bits (254), Expect = 4.2e-22
Identity = 94/214 (43.93%), Postives = 116/214 (54.21%), Query Frame = 0

Query: 18  MDMALDDIIKMSKNSGNKAR-KQRRFPNKVQKFPNHAAQDRPRKLQRFTDSRSSLRQGAL 77
           MDM+LD+IIKM K++ N  + K++R  NK +KF + AA++   K QR+ DSRS +RQGA 
Sbjct: 1   MDMSLDEIIKMEKSNTNVNKGKKQRVLNKKEKF-SGAAKNSAVKAQRYMDSRSDVRQGAF 60

Query: 78  AKRRSNFQGNQFALATEVARKAAVAPIRPRVFN-RRAPN-------------WNKTRVEA 137
           AK+RSNFQGNQF + T VARKAA A  R R +N  R  N             W   R  A
Sbjct: 61  AKKRSNFQGNQFPVTTTVARKAASATPRGRPYNGGRMTNTNQSSWSIVGRLKWVDARFIA 120

Query: 138 PPVQRKPFTNGNFIPKVAAPS-----QPQTN---AMPRQKPQTLDSLFANMKEQRLRALS 197
           PP Q +    G F+ K          Q Q N      RQ PQTLDS FANMKE+R+R   
Sbjct: 121 PPAQNRASQRG-FVGKQQQQQREKIVQQQANGGGGGQRQWPQTLDSRFANMKEERMRMRR 180

Query: 198 QRQNGAAQQRNGG---RQQRP--PWGR--ARFGN 202
              N +    NG    +QQR   PW R   RF N
Sbjct: 181 FADNRSNVGNNGAGSHQQQRSMVPWVRRATRFPN 212

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022941743.11.7e-8987.56uncharacterized protein LOC111447019 isoform X1 [Cucurbita moschata] >XP_0229417... [more]
XP_022982836.13.7e-8987.56uncharacterized protein LOC111481570 isoform X1 [Cucurbita maxima] >XP_022982844... [more]
KAG7031152.14.1e-8886.57hypothetical protein SDJN02_05192, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6600514.14.1e-8886.57Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial, partial [Cucurbit... [more]
XP_023528268.15.4e-8886.57uncharacterized protein LOC111791234 isoform X1 [Cucurbita pepo subsp. pepo] >XP... [more]
Match NameE-valueIdentityDescription
A0A6J1FPB68.1e-9087.56uncharacterized protein LOC111447019 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1J5N51.8e-8987.56uncharacterized protein LOC111481570 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1C7V32.4e-8685.85uncharacterized protein LOC111008218 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A0A0KUX25.5e-8687.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052600 PE=4 SV=1[more]
A0A5A7TPS52.1e-8585.29Pentatricopeptide repeat (PPR) superfamily protein isoform 2 OS=Cucumis melo var... [more]
Match NameE-valueIdentityDescription
AT4G10970.12.9e-3148.37unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G10970.22.9e-3148.37unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G10970.32.9e-3148.37unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G10970.42.9e-3148.37unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G10970.54.2e-2243.93unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF07078FYTTcoord: 16..99
e-value: 4.7E-4
score: 19.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..189
NoneNo IPR availablePANTHERPTHR36048:SF1RIBOSOME MATURATION FACTORcoord: 1..201
NoneNo IPR availablePANTHERPTHR36048RIBOSOME MATURATION FACTORcoord: 1..201

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0002925.1Tan0002925.1mRNA