Tan0002925 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATGAAACCTCCTTAATATTACGCGAACTCTCCACTGAAACGACGCCGTTGCTTCCCCTATATATACCCCCCTCCTTTGCCCTATTTTTCTACCCGAGTCTCATCTTCCTTCGGCGGTAAGCAATTGACTCTCCCGCGAAGCTCAGGAATTCTTCCTCTCTTTCGTTTAGGATCTTCGGAAGTTCTCTGCCCTAATCTTTCACTGGTGTTTCTCCGATCGTCTTATAGACCGAAGAATTTTCTTCTTGTCAAGTGGTAAGTTTTTTCTTCTCCGTTTGAATCTATGTTGCGTCGATCGAAACCCTAGATGTTTGTTTGCGATTTTTGTGGTCGTGTGTATGGATTTCCGTTCATGAATAGATTATTGTCGCTTAATTTATATCTTTATTTGTTATTAGGTCGAGGGCGAGGAGATTTCTTGGTTTTGTTAGGGTTTTATCGTTGAAGTTTTGTATTCGGTTGCGTTTGCTGTTTTTGTAATTCGGTGGGGGAGCCTAATTAGCCATGTTTTTTTCCCTGTTCTTTGATTTTCACGATGTAATTTCTTTTCTTCCGGTTATTCTGAGATTTTCTTGAGACCTTGGAAGTATATTGTATCTATTGACAACCTTTATTTCTGAAACCGATACAGAAACCTGAATGGTTTCGTTAAGTTTCAGATGTTATCCGTCTAAATTTACGTTATAGACATCTATTACTTAAGGTGGTGAGGCACTGCTTGATTTTGTTCGATTTAGACCTAAAAGTGTGCCACCTTGTTGCCTATTGTTTCTGCTGTTGAGGATTGTCTACTTACGAGTTTCTTCTGACTGTTTCTTTCTGTAGACCACTTACTATCAATTTTTGTTTAATTTTATGTCAGATGGCGGCTAAACCACTTACTACTGAGGCAATTGCCATAACTGAGAAGAAGATGGACATGGCCTTAGGTTGCACTTCTGAAATTCTTGCATCAGTACTTCCGAGTTTATGTGCCTCTTGAAAATTCATTAATTATTTTTTGTTTACATATTTTTCTTCAATTAGATGACATTATCAAAATGTCCAAAAATTCTGGGAATAAAGCCAGGAAGCAAAGAAGGTTTCCGGTAAGAACCTGTTTTCGTTAGCATGTCTTTAACCTGAGTAATTTATTGTCGAAGTTGGAAGTTTCCTTTTTATCATAATGTATAATGATTTATCTTTTATATGCAGAACAAAGTGCAGAAATTCCCAAATCATGCTGCTCAAGATAGACCTAGGAAGTTGCAGCGTTTCACGGACTCAAGATCTTCCCTAAGACAGGTTTGTGCAATTATATTAACTTGAATATGATTTTTTTTTTTGGCTTAGTTTGTATGGTTGGTTCTAAATTTTCATTTTGTTTAGGGGGCTTTGGCTAAAAGAAGGTCAAATTTTCAAGGGAATCAGTTTGCTTTGGCAACTGAGGTTGCAAGAAAGGCTGCAGTTGCTCCAATTCGGCCTAGAGTTTTTAACCGTAGGGCACCCAATTGGAATAAGACAAGGTATTGGAGGTTCTCATTGTGAATTATGATTATATGTGTTACCTCAATTCTGGCAACCCTCTGGAACTATAAGAGAAATGTTTACAGAAGAACATTTGAAATTGGTGGCTGGTTGGTTTAATGTGATATTTGATGTTATGGCAGGTAAATCACATTTATTCAAAATTGATGACTTCTCCATCAAGTTTTACAATATGAAGTTAGCGAAGTAATTTGTTGGTTGGAACAACTGTGTGATAAGTTTTTGCTTCAACCTGTTGAAATGGGAGTGGGAGTATTTCCAATTATTTCGTTTCTTCCATGCTGCCTGGGAATTGATTCTGCTTTATCTTCTTAAGTATGGTTTTGGAATGCATCGAGTAATCTTTTGGTTGTCTGATGACTAAGTGATTGATGGGAGTCTACAGAAAGTGGGACAATGATAATTTGGAATTTTGAATGAATTTGACTGCTGCAACCATTTGGAAAAATGTAGTAAAAGGAGCTTTTGTGTGCATTGGATGGGTGTGTATAGTTTTGCGTTTTTGCTCCTTACTAAATGTGTTTATTGTCTTGGATTACTCAATTCTTCATAGACAATGCATAACATTAGAGCAGCCTCAGCCAGTTACCCTTTGGAAGCTGCTTTGTAAGATGTGATGTTTTAACACACCAGAGGATTAAGATGGGGCACCATCCTTTAATCATTATTCCACAATTGTCTTGTTCACCATTCTCAAAGTCTGCTGTGGTTAACTTCCATTCCTGGAGGATGACAATTGACATATCTCCATTTGCTTTCGTTAATCCATGCAAAGAATCAAGGAGGCTGTGGTGATGTCAAATTTGCTCATCTTTTAATCCTTCTAGTGAACCGTATGCTAGTTTCCTTGATTCCTCTTGGTGTTTCCCTCATTCACCATCACTTCCTGGAAACATTAGCCACCCCTCCAACTTCCTTGTTTTGATAAATTTCCAAGTTCGCATCTTGTTGGCTAACCATAGAACTGCAAATGAGTTAGCCCTTGACTCTGGATAATTTTCCACTTCTGAACAAAAATGCTTCCTTTAATTCCTCTAGTCAGTATGGCCAGTGGAAGATGTTATTTCATCATCTTTAAAAGAAGAACCATGGGGTGGAATTGAAATATAGTTTGTTGCAAGTGAAACAAGAACTCTGTACTTCTGGTAATTTTGTCATTACATAATCATGTGATAACAAAAGTGCTGAAGAAATTATGTATGGTTAGTTAAAATGTGTTGAACATTGGCATTTATGGCTTCTTCTATGAGGTATTATATAGATTTTGGGTCTTATCAGAGTGGAAAACCCTAGTACTGCATAAGTTCATGCTGCTGCCGTTTTTCAATCATATGCTGGTTGAAGCCTTCATTTTCTGGTTCAAGTTCCGGACATGAATTTCTCTGGAGTAGATTAACTGTTCATTTGTAGTACTAGATTGGAGCTTTTGTTGTTGTGCATTAAAGCAAGCAAAGCATCCGGTGATTGATTTGAGGTTTGGGGTCTTGCTATATTATCGGAAAGTGCTTTTTTGGATCGAATCAAGCGAAACACATTTTGAGCTGATTCACATTTTTTGATGACTGCATTCTCCTGATCTGGTTTGTCTTTTATTTCTGTTGTTGGGTTCCGTTTGAATTTGCTCGTGGAGGTAAGATACTCTGATCTATCTGCATCCTACTCACTCGAGGACATGATGATTCATGAAGATTACTGGTGTTTGTAAAATTCTAATATAGTAACTTGTTTGACCTAGCAGGGTCTGTATATAAATGATATTTATTATGTTCTTCAATCATTTCAACCATTCTTGGTACAGGGTTGAAGCTCCACCCGTTCAGAGGAAGCCATTTACTAATGGAAACTTCATTCCCAAGGTACTACGTTCTTTCTGAGGTGGTCAGAATGCATTTTCTCGCATCTTTATTTGCAACAAATTCTTCTTAGTGCAGTAATTGTTGTTTAGCATTTACTGGTTTCTCTACTGAGCGTTTAATTCACTATAATTGCCAAAATGTATATTTATTTTCGAAAGCAGGATGTGTACTTGTTTTCTATCAGAGGTCTAGAGAAAGTGGCTCATCAATAAAGAAGATGAATTTAAGTCTGGATCACAGCAGTCTGATCTCTTTTATTTGTCCCGTCTTCCTTCTGCAGGTAGCTGCACCATCCCAACCACAAACAAATGCTATGCCGAGACAGAAGCCACAGACGCTCGACTCACTGTTTGCCAACATGAAGGAACAGAGGCTGAGGGCTTTGTCGCAGCGACAAAATGGTGCTGCACAGCAACGGAATGGTGGTCGCCAGCAAAGACCTCCCTGGGGAAGAGCCCGTTTTGGTAACTGAAGGATACACGCAAAGAAACTTCGTGCGATGGATGAGTATTAGTGTGGGAAATGTAGATGTTGCCTGCTTGTCCACGGTGCCCGATAGCTGATAGGGGATTAAAAGGTTTCTTTTTGTCATTTTTTTTAACCCAAACCTTTGGCTTGTTGTTTTAGCATTTTTCAAGCTTCATTAAGGACCGAAAACTATAGATTTGTATTTTGTACCCGTTCATGTAAAGGTTCTTACTTTTTTCTCCTTTTTAGTTCACTTTCTTCCCTCGTGACCTAATTTCTCAACTTGTTATGTTAAATCCCATTTACACTGCCGGCCCCTCGGCAGCTCTGCTTGTTCTTTGACTTGTACATATTGTAGCGAATAAATACCAGTTGATGTGCCGTTTGATTGCTTACAACATATAATTTATATTTCA AATGAAACCTCCTTAATATTACGCGAACTCTCCACTGAAACGACGCCGTTGCTTCCCCTATATATACCCCCCTCCTTTGCCCTATTTTTCTACCCGAGTCTCATCTTCCTTCGGCGGTAAGCAATTGACTCTCCCGCGAAGCTCAGGAATTCTTCCTCTCTTTCGTTTAGGATCTTCGGAAGTTCTCTGCCCTAATCTTTCACTGGTGTTTCTCCGATCGTCTTATAGACCGAAGAATTTTCTTCTTGTCAAGTGATGGCGGCTAAACCACTTACTACTGAGGCAATTGCCATAACTGAGAAGAAGATGGACATGGCCTTAGATGACATTATCAAAATGTCCAAAAATTCTGGGAATAAAGCCAGGAAGCAAAGAAGGTTTCCGAACAAAGTGCAGAAATTCCCAAATCATGCTGCTCAAGATAGACCTAGGAAGTTGCAGCGTTTCACGGACTCAAGATCTTCCCTAAGACAGGGGGCTTTGGCTAAAAGAAGGTCAAATTTTCAAGGGAATCAGTTTGCTTTGGCAACTGAGGTTGCAAGAAAGGCTGCAGTTGCTCCAATTCGGCCTAGAGTTTTTAACCGTAGGGCACCCAATTGGAATAAGACAAGGGTTGAAGCTCCACCCGTTCAGAGGAAGCCATTTACTAATGGAAACTTCATTCCCAAGGTAGCTGCACCATCCCAACCACAAACAAATGCTATGCCGAGACAGAAGCCACAGACGCTCGACTCACTGTTTGCCAACATGAAGGAACAGAGGCTGAGGGCTTTGTCGCAGCGACAAAATGGTGCTGCACAGCAACGGAATGGTGGTCGCCAGCAAAGACCTCCCTGGGGAAGAGCCCGTTTTGGTAACTGAAGGATACACGCAAAGAAACTTCGTGCGATGGATGAGTATTAGTGTGGGAAATGTAGATGTTGCCTGCTTGTCCACGGTGCCCGATAGCTGATAGGGGATTAAAAGGTTTCTTTTTGTCATTTTTTTTAACCCAAACCTTTGGCTTGTTGTTTTAGCATTTTTCAAGCTTCATTAAGGACCGAAAACTATAGATTTGTATTTTGTACCCGTTCATGTAAAGGTTCTTACTTTTTTCTCCTTTTTAGTTCACTTTCTTCCCTCGTGACCTAATTTCTCAACTTGTTATGTTAAATCCCATTTACACTGCCGGCCCCTCGGCAGCTCTGCTTGTTCTTTGACTTGTACATATTGTAGCGAATAAATACCAGTTGATGTGCCGTTTGATTGCTTACAACATATAATTTATATTTCA ATGGCGGCTAAACCACTTACTACTGAGGCAATTGCCATAACTGAGAAGAAGATGGACATGGCCTTAGATGACATTATCAAAATGTCCAAAAATTCTGGGAATAAAGCCAGGAAGCAAAGAAGGTTTCCGAACAAAGTGCAGAAATTCCCAAATCATGCTGCTCAAGATAGACCTAGGAAGTTGCAGCGTTTCACGGACTCAAGATCTTCCCTAAGACAGGGGGCTTTGGCTAAAAGAAGGTCAAATTTTCAAGGGAATCAGTTTGCTTTGGCAACTGAGGTTGCAAGAAAGGCTGCAGTTGCTCCAATTCGGCCTAGAGTTTTTAACCGTAGGGCACCCAATTGGAATAAGACAAGGGTTGAAGCTCCACCCGTTCAGAGGAAGCCATTTACTAATGGAAACTTCATTCCCAAGGTAGCTGCACCATCCCAACCACAAACAAATGCTATGCCGAGACAGAAGCCACAGACGCTCGACTCACTGTTTGCCAACATGAAGGAACAGAGGCTGAGGGCTTTGTCGCAGCGACAAAATGGTGCTGCACAGCAACGGAATGGTGGTCGCCAGCAAAGACCTCCCTGGGGAAGAGCCCGTTTTGGTAACTGA MAAKPLTTEAIAITEKKMDMALDDIIKMSKNSGNKARKQRRFPNKVQKFPNHAAQDRPRKLQRFTDSRSSLRQGALAKRRSNFQGNQFALATEVARKAAVAPIRPRVFNRRAPNWNKTRVEAPPVQRKPFTNGNFIPKVAAPSQPQTNAMPRQKPQTLDSLFANMKEQRLRALSQRQNGAAQQRNGGRQQRPPWGRARFGN Homology
BLAST of Tan0002925 vs. NCBI nr
Match: XP_022941743.1 (uncharacterized protein LOC111447019 isoform X1 [Cucurbita moschata] >XP_022941744.1 uncharacterized protein LOC111447019 isoform X1 [Cucurbita moschata] >XP_022941747.1 uncharacterized protein LOC111447019 isoform X1 [Cucurbita moschata]) HSP 1 Score: 339.7 bits (870), Expect = 1.7e-89 Identity = 176/201 (87.56%), Postives = 183/201 (91.04%), Query Frame = 0
BLAST of Tan0002925 vs. NCBI nr
Match: XP_022982836.1 (uncharacterized protein LOC111481570 isoform X1 [Cucurbita maxima] >XP_022982844.1 uncharacterized protein LOC111481570 isoform X1 [Cucurbita maxima] >XP_022982853.1 uncharacterized protein LOC111481570 isoform X1 [Cucurbita maxima]) HSP 1 Score: 338.6 bits (867), Expect = 3.7e-89 Identity = 176/201 (87.56%), Postives = 182/201 (90.55%), Query Frame = 0
BLAST of Tan0002925 vs. NCBI nr
Match: KAG7031152.1 (hypothetical protein SDJN02_05192, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 335.1 bits (858), Expect = 4.1e-88 Identity = 174/201 (86.57%), Postives = 181/201 (90.05%), Query Frame = 0
BLAST of Tan0002925 vs. NCBI nr
Match: KAG6600514.1 (Nucleoside diphosphate kinase IV, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 335.1 bits (858), Expect = 4.1e-88 Identity = 174/201 (86.57%), Postives = 181/201 (90.05%), Query Frame = 0
BLAST of Tan0002925 vs. NCBI nr
Match: XP_023528268.1 (uncharacterized protein LOC111791234 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023528276.1 uncharacterized protein LOC111791234 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 334.7 bits (857), Expect = 5.4e-88 Identity = 174/201 (86.57%), Postives = 182/201 (90.55%), Query Frame = 0
BLAST of Tan0002925 vs. ExPASy TrEMBL
Match: A0A6J1FPB6 (uncharacterized protein LOC111447019 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447019 PE=4 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 8.1e-90 Identity = 176/201 (87.56%), Postives = 183/201 (91.04%), Query Frame = 0
BLAST of Tan0002925 vs. ExPASy TrEMBL
Match: A0A6J1J5N5 (uncharacterized protein LOC111481570 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481570 PE=4 SV=1) HSP 1 Score: 338.6 bits (867), Expect = 1.8e-89 Identity = 176/201 (87.56%), Postives = 182/201 (90.55%), Query Frame = 0
BLAST of Tan0002925 vs. ExPASy TrEMBL
Match: A0A6J1C7V3 (uncharacterized protein LOC111008218 OS=Momordica charantia OX=3673 GN=LOC111008218 PE=4 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 2.4e-86 Identity = 176/205 (85.85%), Postives = 184/205 (89.76%), Query Frame = 0
BLAST of Tan0002925 vs. ExPASy TrEMBL
Match: A0A0A0KUX2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052600 PE=4 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 5.5e-86 Identity = 176/202 (87.13%), Postives = 184/202 (91.09%), Query Frame = 0
BLAST of Tan0002925 vs. ExPASy TrEMBL
Match: A0A5A7TPS5 (Pentatricopeptide repeat (PPR) superfamily protein isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G001910 PE=4 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 2.1e-85 Identity = 174/204 (85.29%), Postives = 184/204 (90.20%), Query Frame = 0
BLAST of Tan0002925 vs. TAIR 10
Match: AT4G10970.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 132.9 bits (333), Expect = 2.9e-31 Identity = 104/215 (48.37%), Postives = 131/215 (60.93%), Query Frame = 0
BLAST of Tan0002925 vs. TAIR 10
Match: AT4G10970.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 132.9 bits (333), Expect = 2.9e-31 Identity = 104/215 (48.37%), Postives = 131/215 (60.93%), Query Frame = 0
BLAST of Tan0002925 vs. TAIR 10
Match: AT4G10970.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 132.9 bits (333), Expect = 2.9e-31 Identity = 104/215 (48.37%), Postives = 131/215 (60.93%), Query Frame = 0
BLAST of Tan0002925 vs. TAIR 10
Match: AT4G10970.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 132.9 bits (333), Expect = 2.9e-31 Identity = 104/215 (48.37%), Postives = 131/215 (60.93%), Query Frame = 0
BLAST of Tan0002925 vs. TAIR 10
Match: AT4G10970.5 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G23910.2); Has 52 Blast hits to 51 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 102.4 bits (254), Expect = 4.2e-22 Identity = 94/214 (43.93%), Postives = 116/214 (54.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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