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Tan0002683 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTATGAATGAATTATGAATTATGAATTATGATTTGAGTTCTGTTCTGGGAGTGTGAGTATTGAACAGAGTTCTGAATATGAACTATTCCCTTGGCCTCCACATTCCCAAGGCCTTGCCTTCTGTCTCCTCTTCCAAAACCCTCTTTTCTTCTCTCTCTTATTCCTCCTTTAACCTCTTCAAATTCCCCTCCTCCCATTCAATTCCCAATAATAATGTTATCTTTCTCTCTCTTTCTCTGTTCTTCTCTCTCTGTTCTTTCTCTCTCTAAATATTTTTGTTTTGTTTTTGTTTTTGTTTTTAGTTTCAGGTAGTGGCAAGCATCTCAGAACACCCCTTTGCCTTTCTTCACCAAAAGAAATCCAGTTTGCCTCTTCAACTTGCAGCCCTTTTAGCCACTGTAAGCAACTTAAATTTCCATTTTTTTTTTTTTTCTCTTTCAGTTTCATAAAAATTGAAAGGTAAAAGTAAAAAATTTACTCAATTAAATTGTAAAGATGGGTTGAATCTATCATCTGCTAAGTTATATAGAGATTAATTTAAGACCGACGATTTTGTTTTTAACATAAATAATGGATAAAAAAATGATGAGGTTGGGGAGCCAGCGAAAGCTGTAACAGGAGACAACAACCATGAGGTTCCACTGACATGGATTTTGACCCAATTAGGCATTGTTGGATTCTTTTACTTCCTTATCTTTCCTGTAAGGATTTCCCCAATTTTTATTTTTTCATTTTTTCATTTTTTAATGATGATTTAAGTTTCTAAAGGAAAAATTAATTAAAATTTTGGATGAAATTTGCAGCCAATTATCATGAACTGGCTGAGGATAAGATGGTATAGAAGAAACTTGTTGGAAATGTATCTCCAATTCATGTGTGTCTTCCTTTTCTTCCCTGGGTAACTCCAATCTATCTATATCCTGTTTTATCTCTGGTAAATGGTAATTACTATAGTTTTATTTTTACATTTCTTTTTTTTAAAAAAAAAATATATATATATATATAATATAACAAATGAAGGCAGATGTTCAAATTTTAAATTATTAATCATAGAGTATAAAGATTTAGGCCTTTTAACTGCAAGAGTATATATATGTCAAAAGTTATATTGCTCAACTTTGACTTAAACTTATTAGCTACTTTTCACCCAAGGCATTGGTAAAAGTATTTATTTTATACTTGCCTATGAACCCACATCATGTCTTTTTTTTAAAAAAAAACATCTAAATTATGCATTAAATTATAAGTTTACTCCCTAAACTTTTAGGTTTGTATTAGTTTTAGAAAGATATCTAATAAGTTTTATAGATTTGTGTTTATTAGATGTGTCTGAACTTTAAAATTTGTCTAAAATATATCATTAAACTTTTAATTCTTTGTTTAATATGTTATCGAATTTTTATTTTTGCGTCTATAATTAATCTGATAATGATAATTAGACACAAAGTTTATGTTTAACGACCTTTTAGACACAAGTTTGAAATTTGAATCACTAAAACTTCATTGGATACCTATTTGATTTTTTGTTTTTAATTTTTGAAAATTAAGTTCGTTTTGTTCCAATTTTTGTTTTAATCTCCTTTAAAGAAATATGTGAATGCCTAATCAAATTTAAAAAAACAAAACAAGTTTTTAGAAACTAGAACCCGTTTGATAACCATTTTGTTTTTTGTTTTTAATTTTTGATAGTTAAGCTTATTTTCACCTAATTTCTCTACAATAGAGATCATCTCCCTTAAGTAAGCATTTGAACTATTAGCCAAATTCTAAAAACAAAATCAAGTTTTTGAAAGCTACTTTTTTTAGTTTTCAAAAGTTGGCTTGGTTTTTGAAAACATAGGTACAAAGTAGATAAGAAGACATATAAACTCATTGATAGAAGTAATATTTTTAGGTTTAAATTTCAAAAACTAGAAACCAAAAACAAAATGGTTATCCAAACAGGGCGTACATTTTTTAAGCTCCGTTTGATAACCATATTTGATTTTTGATTTTTTGTTTTTAGTTTTTAAAAATTATGTTTGTTTTCCATAATTTTTCTTCATCTTATCTACAATGATTTTCATGTTTCTTGAAGTATCATTTAAGTTTCTAGCCAAATTTCAAAAACAAAAACTACTTTTTAAAAACTATATATAGTTTTCAAAACTTAATTTGGTTTTTGAAAACATAAGTACAAAGTTGATAAGAAAACATAGAGATTCTGGTAGTGGTGGTAGTATTTTTAAACTTAATTTTAAAAAATTAAATGGTTATCAAATAAGGCTTAATTCTCACAAATTTGTTTCTTTTTTAAAAAAATTGGCTAAGCAACCAACTATTTTCTAAAGAGAGATTAAATTAATGGGTTTAAAACTTGTAGTTTAAATTTTAAAGTAAGTTGCAATGGAACAAACTGTGCAGCATTCTATTGTGGGCGCCATTTCTGAACTTCAGAAAGTTTCCACGAGATCCATCGATGAAGTATCCATGGTCGACGCCGCAAGAGCCATCTCAGATAAAAAATGCATACTTGAAGTACCCATTTGCCAAGCCTGAAGATTACGACTGGTAACTGTTTGTAAAAATGCCTGAAGATTACTCTCGCTGTTTCTGCCACTTCAACGACCAACTGCAGCAGCCCTTTTCATTCAGCTCATAAATGTTCTGTATTATTGCATAATCGATGCTTCTAATTAGGACTAAACTGGTAACCAAACCGATGTTCAGTTAAGCACAAAATCGATTGTCTTGGTTTGGTTCTTCTTCAACTCGAGTTATCCTTGGTTTGGGCTACTTCTTAATTTCCATTCTTTTTTAGTTCAACAACATTTGAGAGTGAGTTAATTTGAACATCCTAATCTCAAATTAAAGGTACATGTTACGTGTAGCCACCTATTTTTGTCCGACTCATTTTTAATTAAATTGTTTTATCATAAATATCTATGATTTTTTTTTTA GTATGAATGAATTATGAATTATGAATTATGATTTGAGTTCTGTTCTGGGAGTGTGAGTATTGAACAGAGTTCTGAATATGAACTATTCCCTTGGCCTCCACATTCCCAAGGCCTTGCCTTCTGTCTCCTCTTCCAAAACCCTCTTTTCTTCTCTCTCTTATTCCTCCTTTAACCTCTTCAAATTCCCCTCCTCCCATTCAATTCCCAATAATAATTTTCAGGTAGTGGCAAGCATCTCAGAACACCCCTTTGCCTTTCTTCACCAAAAGAAATCCAGTTTGCCTCTTCAACTTGCAGCCCTTTTAGCCACTGTTGGGGAGCCAGCGAAAGCTGTAACAGGAGACAACAACCATGAGGTTCCACTGACATGGATTTTGACCCAATTAGGCATTGTTGGATTCTTTTACTTCCTTATCTTTCCTCCAATTATCATGAACTGGCTGAGGATAAGATGGTATAGAAGAAACTTGTTGGAAATGTATCTCCAATTCATGTGTGTCTTCCTTTTCTTCCCTGGCATTCTATTGTGGGCGCCATTTCTGAACTTCAGAAAGTTTCCACGAGATCCATCGATGAAGTATCCATGGTCGACGCCGCAAGAGCCATCTCAGATAAAAAATGCATACTTGAAGTACCCATTTGCCAAGCCTGAAGATTACGACTGGTAACTGTTTGTAAAAATGCCTGAAGATTACTCTCGCTGTTTCTGCCACTTCAACGACCAACTGCAGCAGCCCTTTTCATTCAGCTCATAAATGTTCTGTATTATTGCATAATCGATGCTTCTAATTAGGACTAAACTGGTAACCAAACCGATGTTCAGTTAAGCACAAAATCGATTGTCTTGGTTTGGTTCTTCTTCAACTCGAGTTATCCTTGGTTTGGGCTACTTCTTAATTTCCATTCTTTTTTAGTTCAACAACATTTGAGAGTGAGTTAATTTGAACATCCTAATCTCAAATTAAAGGTACATGTTACGTGTAGCCACCTATTTTTGTCCGACTCATTTTTAATTAAATTGTTTTATCATAAATATCTATGATTTTTTTTTTA ATGAACTATTCCCTTGGCCTCCACATTCCCAAGGCCTTGCCTTCTGTCTCCTCTTCCAAAACCCTCTTTTCTTCTCTCTCTTATTCCTCCTTTAACCTCTTCAAATTCCCCTCCTCCCATTCAATTCCCAATAATAATTTTCAGGTAGTGGCAAGCATCTCAGAACACCCCTTTGCCTTTCTTCACCAAAAGAAATCCAGTTTGCCTCTTCAACTTGCAGCCCTTTTAGCCACTGTTGGGGAGCCAGCGAAAGCTGTAACAGGAGACAACAACCATGAGGTTCCACTGACATGGATTTTGACCCAATTAGGCATTGTTGGATTCTTTTACTTCCTTATCTTTCCTCCAATTATCATGAACTGGCTGAGGATAAGATGGTATAGAAGAAACTTGTTGGAAATGTATCTCCAATTCATGTGTGTCTTCCTTTTCTTCCCTGGCATTCTATTGTGGGCGCCATTTCTGAACTTCAGAAAGTTTCCACGAGATCCATCGATGAAGTATCCATGGTCGACGCCGCAAGAGCCATCTCAGATAAAAAATGCATACTTGAAGTACCCATTTGCCAAGCCTGAAGATTACGACTGGTAA MNYSLGLHIPKALPSVSSSKTLFSSLSYSSFNLFKFPSSHSIPNNNFQVVASISEHPFAFLHQKKSSLPLQLAALLATVGEPAKAVTGDNNHEVPLTWILTQLGIVGFFYFLIFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIKNAYLKYPFAKPEDYDW Homology
BLAST of Tan0002683 vs. ExPASy Swiss-Prot
Match: Q9CAC5 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhL PE=2 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 7.2e-48 Identity = 104/193 (53.89%), Postives = 129/193 (66.84%), Query Frame = 0
BLAST of Tan0002683 vs. ExPASy Swiss-Prot
Match: Q7U620 (NAD(P)H-quinone oxidoreductase subunit L OS=Synechococcus sp. (strain WH8102) OX=84588 GN=ndhL PE=3 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.2e-05 Identity = 24/60 (40.00%), Postives = 37/60 (61.67%), Query Frame = 0
BLAST of Tan0002683 vs. ExPASy Swiss-Prot
Match: Q10W93 (NAD(P)H-quinone oxidoreductase subunit L OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=ndhL PE=3 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 1.5e-05 Identity = 23/49 (46.94%), Postives = 34/49 (69.39%), Query Frame = 0
BLAST of Tan0002683 vs. ExPASy Swiss-Prot
Match: B0C6G0 (NAD(P)H-quinone oxidoreductase subunit L OS=Acaryochloris marina (strain MBIC 11017) OX=329726 GN=ndhL PE=3 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 3.4e-05 Identity = 28/64 (43.75%), Postives = 39/64 (60.94%), Query Frame = 0
BLAST of Tan0002683 vs. ExPASy Swiss-Prot
Match: Q8DKZ3 (NAD(P)H-quinone oxidoreductase subunit L OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=ndhL PE=1 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 3.4e-05 Identity = 26/64 (40.62%), Postives = 35/64 (54.69%), Query Frame = 0
BLAST of Tan0002683 vs. NCBI nr
Match: XP_038875378.1 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic [Benincasa hispida]) HSP 1 Score: 327.4 bits (838), Expect = 8.4e-86 Identity = 164/196 (83.67%), Postives = 172/196 (87.76%), Query Frame = 0
BLAST of Tan0002683 vs. NCBI nr
Match: XP_023527074.1 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 322.4 bits (825), Expect = 2.7e-84 Identity = 164/196 (83.67%), Postives = 172/196 (87.76%), Query Frame = 0
BLAST of Tan0002683 vs. NCBI nr
Match: XP_022159257.1 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 [Momordica charantia]) HSP 1 Score: 317.8 bits (813), Expect = 6.7e-83 Identity = 155/192 (80.73%), Postives = 172/192 (89.58%), Query Frame = 0
BLAST of Tan0002683 vs. NCBI nr
Match: XP_022953622.1 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 [Cucurbita moschata]) HSP 1 Score: 317.4 bits (812), Expect = 8.7e-83 Identity = 161/196 (82.14%), Postives = 171/196 (87.24%), Query Frame = 0
BLAST of Tan0002683 vs. NCBI nr
Match: KAG6601873.1 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 317.4 bits (812), Expect = 8.7e-83 Identity = 161/196 (82.14%), Postives = 170/196 (86.73%), Query Frame = 0
BLAST of Tan0002683 vs. ExPASy TrEMBL
Match: A0A6J1DZB7 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025670 PE=4 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 3.2e-83 Identity = 155/192 (80.73%), Postives = 172/192 (89.58%), Query Frame = 0
BLAST of Tan0002683 vs. ExPASy TrEMBL
Match: A0A6J1GNR4 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456098 PE=4 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 4.2e-83 Identity = 161/196 (82.14%), Postives = 171/196 (87.24%), Query Frame = 0
BLAST of Tan0002683 vs. ExPASy TrEMBL
Match: A0A6J1JKK4 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487750 PE=4 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 1.6e-82 Identity = 159/196 (81.12%), Postives = 167/196 (85.20%), Query Frame = 0
BLAST of Tan0002683 vs. ExPASy TrEMBL
Match: A0A6J1GQ77 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456098 PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 6.1e-82 Identity = 159/196 (81.12%), Postives = 168/196 (85.71%), Query Frame = 0
BLAST of Tan0002683 vs. ExPASy TrEMBL
Match: A0A6J1DYB3 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111025670 PE=4 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 3.9e-81 Identity = 155/192 (80.73%), Postives = 171/192 (89.06%), Query Frame = 0
BLAST of Tan0002683 vs. TAIR 10
Match: AT1G70760.1 (inorganic carbon transport protein-related ) HSP 1 Score: 191.8 bits (486), Expect = 5.1e-49 Identity = 104/193 (53.89%), Postives = 129/193 (66.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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