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Tan0002648 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCATGTCCTAGAACCCCAAATTTTCACGTCTTTTCTTCCATAGCCACATAAAATAAACACAACTTTCTGATCATCTTCCTCGAGCTCGCACTGGACTGAGCTCAGAAGCCCTAATTCTTCGACCACAGACGTTGCACGAACAATTAACACAGACACGTATGGCGAAGCGCTTAATTCCATCCCTCAATCGTGTCTTGATCGAGAAAATTGTTCCTCCTTCCAAAACCACCGCCGGCATTCTTCTCCCTGAAAGTTCCACCAAGGTATTTGCAATGTAGCATTCGTTCTTCATTCTCTCTCTAAGTTCATTTCAATTTTCCGTTTCTTTGCTTCGATTTTATTTGTGTATGTTATTGATCGGTGTTTTCTCTTGTAGCTGAACTCCGGCAAGGTGGTTGCGGTGGGTCCTGGTACACAAGATAGAAGCGGGAATCTGGTTCCGGTCTGTGTGAAAGAAGGTGATACTGTTCTTTTGCCTGAATATGGAGGCACGCCAGTGAAGCTTGGAGAGAAAGAGTATGCTTCTAAACAGTTTTAGCCTCGTTTTCATGCTCTATTACCAGAAATGATCGTCTTTGATATAATGCGTCCTGCACTTTTTGTGCTTATTATATTTGCTTCTTTAGTTCATTAACGTAATCTCATTAATCATGTTTGTATGAAATTAGTCTTTGAGGCCCCATCTCCAATTCTAAAATAAATTTTAATTCATGTATAAATGATTAATAAAAAAGTGAAGAACTTAATTAAGTTTGTATGTAGAATTGTGGGCTATAACTTAACTTGTGGTGCTAAAACTAAATATTAGAAACTCCAAGAAAGAAAAACAAAGTTGATTAGAAATGGAATCTAAATTAAAAGCGGACAGGAAGATTTTCGGCTAAGAGTGAATTTGAGATGAATTTTACAAGGATTTAGAGTTAGTGTGTTAAAACCTTTATATTTGTTAGATAATCGTAAAGTGTCCTAGAAACTTTCAGAGCATGAAAACACTAAGTTTAAATTGCAAATTGATTACTATGGTTTGGGGAAAATTAGAATTTTGTTCTTAAAGTTAAAATTTCAGGTGGAATAAAACCTCACAAATAGTTAATGGATTATTTATAAGCTTTTATCAAATCATAGGACTAATTCTAACCTTTAAAAATATAGGGGCTAAATTCTAACTTTTTCAAAATCATAGGGTCCAAATTTTGTAATTTAACTAAACACTTAAAAAGTTACTTCCCAGAGAAGCACTTAATTACTGTTCCTTCCCGAAACTTATCGTTGAATGTTTCTCAAAATCATCCCAGATCAAGACTAAAGTAGGTTTAAATATTATTCTTTCTATTCATTTTCATGATTCTTGTTTGGATTTCTGTGGTGGGGTTTATCTGCAGGTTCCATTTGTTTAGAGATGAAGACCTTTTGGGAACTCTACATGATTGATTAATTGATTCAATGGTGATCTGATCGTGCTTTTTGCAAGAGCTCATTCTAGTACTTTGAGTTGGTTTTCTTCCATGTTGTAGCTTCTTATTGAATACAAGAATGAAGGATGTCATCAATTATGGTTAGTTCCCATTTAGATAAATCTTAATGGAAACTCTTTTCAGTTCCTCATTGCCACTTCTGTTGCCATTCTTAATCTTTATGCAGCATTTTTCTTGATGGTGTGGAGGAAAGTTGATGGCTTTAAAAATAATTAGGAACATAGGGTTGTTTAAAGAGTATTTAGG CTCATGTCCTAGAACCCCAAATTTTCACGTCTTTTCTTCCATAGCCACATAAAATAAACACAACTTTCTGATCATCTTCCTCGAGCTCGCACTGGACTGAGCTCAGAAGCCCTAATTCTTCGACCACAGACGTTGCACGAACAATTAACACAGACACGTATGGCGAAGCGCTTAATTCCATCCCTCAATCGTGTCTTGATCGAGAAAATTGTTCCTCCTTCCAAAACCACCGCCGGCATTCTTCTCCCTGAAAGTTCCACCAAGCTGAACTCCGGCAAGGTGGTTGCGGTGGGTCCTGGTACACAAGATAGAAGCGGGAATCTGGTTCCGGTCTGTGTGAAAGAAGGTGATACTGTTCTTTTGCCTGAATATGGAGGCACGCCAGTGAAGCTTGGAGAGAAAGAGTTCCATTTGTTTAGAGATGAAGACCTTTTGGGAACTCTACATGATTGATTAATTGATTCAATGGTGATCTGATCGTGCTTTTTGCAAGAGCTCATTCTAGTACTTTGAGTTGGTTTTCTTCCATGTTGTAGCTTCTTATTGAATACAAGAATGAAGGATGTCATCAATTATGGTTAGTTCCCATTTAGATAAATCTTAATGGAAACTCTTTTCAGTTCCTCATTGCCACTTCTGTTGCCATTCTTAATCTTTATGCAGCATTTTTCTTGATGGTGTGGAGGAAAGTTGATGGCTTTAAAAATAATTAGGAACATAGGGTTGTTTAAAGAGTATTTAGG ATGGCGAAGCGCTTAATTCCATCCCTCAATCGTGTCTTGATCGAGAAAATTGTTCCTCCTTCCAAAACCACCGCCGGCATTCTTCTCCCTGAAAGTTCCACCAAGCTGAACTCCGGCAAGGTGGTTGCGGTGGGTCCTGGTACACAAGATAGAAGCGGGAATCTGGTTCCGGTCTGTGTGAAAGAAGGTGATACTGTTCTTTTGCCTGAATATGGAGGCACGCCAGTGAAGCTTGGAGAGAAAGAGTTCCATTTGTTTAGAGATGAAGACCTTTTGGGAACTCTACATGATTGA MAKRLIPSLNRVLIEKIVPPSKTTAGILLPESSTKLNSGKVVAVGPGTQDRSGNLVPVCVKEGDTVLLPEYGGTPVKLGEKEFHLFRDEDLLGTLHD Homology
BLAST of Tan0002648 vs. ExPASy Swiss-Prot
Match: P34893 (10 kDa chaperonin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CPN10 PE=1 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 8.3e-37 Identity = 69/97 (71.13%), Postives = 87/97 (89.69%), Query Frame = 0
BLAST of Tan0002648 vs. ExPASy Swiss-Prot
Match: Q96539 (10 kDa chaperonin OS=Brassica napus OX=3708 PE=3 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 1.4e-36 Identity = 69/97 (71.13%), Postives = 87/97 (89.69%), Query Frame = 0
BLAST of Tan0002648 vs. ExPASy Swiss-Prot
Match: O59804 (10 kDa heat shock protein, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=hsp10 PE=1 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.1e-17 Identity = 43/97 (44.33%), Postives = 67/97 (69.07%), Query Frame = 0
BLAST of Tan0002648 vs. ExPASy Swiss-Prot
Match: Q64433 (10 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspe1 PE=1 SV=2) HSP 1 Score: 89.7 bits (221), Expect = 1.9e-17 Identity = 47/96 (48.96%), Postives = 63/96 (65.62%), Query Frame = 0
BLAST of Tan0002648 vs. ExPASy Swiss-Prot
Match: Q9W6X3 (10 kDa heat shock protein, mitochondrial OS=Oryzias latipes OX=8090 GN=hspe1 PE=3 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 2.5e-17 Identity = 44/96 (45.83%), Postives = 66/96 (68.75%), Query Frame = 0
BLAST of Tan0002648 vs. NCBI nr
Match: XP_038907054.1 (10 kDa chaperonin, mitochondrial-like [Benincasa hispida]) HSP 1 Score: 184.1 bits (466), Expect = 5.7e-43 Identity = 88/97 (90.72%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of Tan0002648 vs. NCBI nr
Match: KAF3432182.1 (hypothetical protein FNV43_RR26921 [Rhamnella rubrinervis]) HSP 1 Score: 183.3 bits (464), Expect = 9.7e-43 Identity = 88/97 (90.72%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of Tan0002648 vs. NCBI nr
Match: XP_022152333.1 (10 kDa chaperonin, mitochondrial-like [Momordica charantia]) HSP 1 Score: 183.3 bits (464), Expect = 9.7e-43 Identity = 91/97 (93.81%), Postives = 94/97 (96.91%), Query Frame = 0
BLAST of Tan0002648 vs. NCBI nr
Match: XP_004150598.1 (10 kDa chaperonin, mitochondrial [Cucumis sativus] >KAE8648605.1 hypothetical protein Csa_007995 [Cucumis sativus]) HSP 1 Score: 179.9 bits (455), Expect = 1.1e-41 Identity = 88/97 (90.72%), Postives = 94/97 (96.91%), Query Frame = 0
BLAST of Tan0002648 vs. NCBI nr
Match: XP_022990905.1 (10 kDa chaperonin, mitochondrial-like [Cucurbita maxima]) HSP 1 Score: 179.5 bits (454), Expect = 1.4e-41 Identity = 89/97 (91.75%), Postives = 92/97 (94.85%), Query Frame = 0
BLAST of Tan0002648 vs. ExPASy TrEMBL
Match: A0A6J1DEL3 (10 kDa chaperonin, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111020078 PE=3 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 4.7e-43 Identity = 91/97 (93.81%), Postives = 94/97 (96.91%), Query Frame = 0
BLAST of Tan0002648 vs. ExPASy TrEMBL
Match: A0A6J1JRD8 (10 kDa chaperonin, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111487657 PE=3 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 6.8e-42 Identity = 89/97 (91.75%), Postives = 92/97 (94.85%), Query Frame = 0
BLAST of Tan0002648 vs. ExPASy TrEMBL
Match: A0A6J1E6B4 (10 kDa chaperonin, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111431183 PE=3 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 8.9e-42 Identity = 89/97 (91.75%), Postives = 92/97 (94.85%), Query Frame = 0
BLAST of Tan0002648 vs. ExPASy TrEMBL
Match: A0A5D3E3M3 (10 kDa chaperonin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00290 PE=3 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 2.6e-41 Identity = 87/96 (90.62%), Postives = 93/96 (96.88%), Query Frame = 0
BLAST of Tan0002648 vs. ExPASy TrEMBL
Match: A0A1S3CU36 (10 kDa chaperonin-like OS=Cucumis melo OX=3656 GN=LOC103504560 PE=3 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 2.6e-41 Identity = 87/96 (90.62%), Postives = 93/96 (96.88%), Query Frame = 0
BLAST of Tan0002648 vs. TAIR 10
Match: AT1G23100.1 (GroES-like family protein ) HSP 1 Score: 156.8 bits (395), Expect = 9.1e-39 Identity = 73/97 (75.26%), Postives = 89/97 (91.75%), Query Frame = 0
BLAST of Tan0002648 vs. TAIR 10
Match: AT1G14980.1 (chaperonin 10 ) HSP 1 Score: 154.1 bits (388), Expect = 5.9e-38 Identity = 69/97 (71.13%), Postives = 87/97 (89.69%), Query Frame = 0
BLAST of Tan0002648 vs. TAIR 10
Match: AT5G20720.1 (chaperonin 20 ) HSP 1 Score: 52.4 bits (124), Expect = 2.4e-07 Identity = 31/76 (40.79%), Postives = 42/76 (55.26%), Query Frame = 0
BLAST of Tan0002648 vs. TAIR 10
Match: AT5G20720.2 (chaperonin 20 ) HSP 1 Score: 52.4 bits (124), Expect = 2.4e-07 Identity = 31/76 (40.79%), Postives = 42/76 (55.26%), Query Frame = 0
BLAST of Tan0002648 vs. TAIR 10
Match: AT5G20720.3 (chaperonin 20 ) HSP 1 Score: 52.4 bits (124), Expect = 2.4e-07 Identity = 31/76 (40.79%), Postives = 42/76 (55.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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