
Tan0002604 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCAAACCAACCAAAATGTACGGTGGAGATATAAAAAGTTGTCCACGAGTAACGATGGCCTTCGATTAAAGACCTTTAGATTGGCAACAAAAAGCTTCTTCCCTTTTCCTCTCGCATCCTCCTCAGTCTCTCTCTCTCTCTCTCTCTATCCGCCATGGCTCTGCAAGTCTGGGAGACGCTGAAGGAGGCGATCGTGGCCTACACAGGCCTCTCTCCGTCGACCTTCTTCACTGTCTTGGCTCTCGGCCTCGCCATTTACTATCTCATTTCCAGTTTCTTCGCTCCCTCCGACTACGGAACCCACACTAGAGACTTGGGGGAGCAGCTCCAGCCTCTCCCTCCGCCTGTCCAAGTCGGTGAGATTTCTGAAGATGACTTGAAGCAATACGATGGCTCCGATTCTAAGAAGCCTCTGCTCATGGCTATCAAGGGCCAGATCTACGATGTTTCCCAGAGCAGGTCTATTGAGGGTTTTTTTTTCCCTAAAAAATTTTCTCTCTGTTTTGGGTAATTAGTGTTTGGATGATCGTGATGAGCTTTGATTCGGGTTCAATTTGTTCTTGAGTCAACGTGTTTATAGAATTCTGTGATGGTATGTGCAGGTTTTAATTGGTCTGGTGCTTTGTTTTGTCCTGAACAGCTCTCCTTTTCGTTCAAAGAGCTACCGATTTCTGCAATTTTGATACTTTATTTGGTCCTGCTGTATTGAATCATCATCGAAGTTTTTTAGGCTATTTCCATTTTTCACTTCGTTCTCTTTTCCTTGCTGATAGGTGTTCTCCATTGTCTGTTTGATGCATATTACTGTGAAGTAGGATTATTGATAGTTTCTGTGCACTCTCTGCTTCTTTCTTGGTGTATGAGTTTATAAAACTAGGGGTGCAAGCTGAAAGCAGAATCGACTCTTGTTGGTCCATTCGGTTTCGATAGATTTTGTGAATTCCTGTACTACAATCCTATCTTTTATGATGTTCTATGGTTGCCAGATTATAAGTTCCGAAAACCAAATAAGAAACTTTTTAGTTTAGCTTTCTGGTCTTCAATCCAAACTTTTTTTCCTCTCTTCTGTGGTGGAGGCTTGAACAGAAACCCTCTGTTAGTAGATTGCTGAATTTGAACATGTAATTCTTCTGTATTTGAACTTTGATGTTTCTTGTTTCTTTTTTCCTTCTTATATCTGTAATTTTCCATGTATCTACTTTTGAAAATATTTATTTGTGACAGTTGCTTTTAACATTCAATTACAGCCATAGTGTTTTCCATATAGAAGTTGTATATCATATGTAGTTCACAGAAGTAAAAAGTTTATTTTTCTTTGTTTGAGTTGTTCTGGAAACATCTTCTACTTTTTAAGGGCTATTCTGTGTGTTTGGAAAGGGTCCAGAGGCCAATTCTCCTTTCGTTTGGGGTCAGAGAATGTTTATACGCAAAATCACTTTTTACAAGCTCATGATTTCAAAGAGAGAATAAGTTAAAGAGAACACAATGTAGAAAGTTGTTCTCATAATGTGCTAAAAAGTAGGAATTTGCTTTTCCAAAAACTTCATAAAAACAGGCCCCTTGTATCATGATCAAGTATACTTTTGGACATGCATTACAATTTTTTTGTGACATTCTTTGGCTATCTGTCTCCATGAAGAGTTATGTCTCATTGTGTACTATTTACTACTCTAAGGCTGTGGACATGGATATCCGTTTCATTGCAGCATTTTGCTCTCGTGTGTGTGTGCATACTTGTAAAAGAAAATTAAAATCGAAGATAACTGCACTTGTATCGTTCGGGTTGTAGTCTTGTGGCTGCCCATAGATATCGCTTCCATTTTCCGTATTTCTTTCAATCAAGCTTTTATGTTGCTTGATATTATCTTCTAACCCATTTTTACTCGCAGGATGTTCTATGGACCCGGGGGGCCCTATGCCCTTTTTGCTGGAAAGGATGCCAGCAGAGCTCTTGCAAAAATGTCTTTTGAAGAGAAAGATCTGACTGGGGATATCTCTGGTCTCGGTCCATTCGAACTCGAAGCCTTGCAGGACTGGGAATACAAATTCATGAGCAAATACGTCAAAGTTGGGACAGTCAAGAAGCCAGTTGCCGAAGGTGATGCTGCACCTGCTGCGGGCGAACCTGCAGAATCAAGCACTGCAGAAGTTAGCAAACCGGCCGAAGACAATCCCTCAGAATCTCGAGCTGATAAAGCTGAGGAAACCCCCGCCGTTGCCAATGTTGAATAATATTTTGCAGACTGCAGACGCCCCTTACCGACGGATATACGAGAAGAGAACAATGTATGTGTGCTCATGTTTCAGTAATCTTGTTTCATAGATAAGTTAAATCGAGTTGTGTAGGATGATGATATTACAGGTGGGGTTAAGACTTGGTTTATGTTTAATCTTGTTCAATAAACTTCTGACAATAAGATAATAGTCTTTGAATTTGGAAATGGGACTGAGGCTCTCTTTTCTCAATTTTTTTTTCCTTTTCTGATTGGAACTGAAAGTATGAACCAGTGAATAACAATATATAGGGATTAACAATTC ATCAAACCAACCAAAATGTACGGTGGAGATATAAAAAGTTGTCCACGAGTAACGATGGCCTTCGATTAAAGACCTTTAGATTGGCAACAAAAAGCTTCTTCCCTTTTCCTCTCGCATCCTCCTCAGTCTCTCTCTCTCTCTCTCTCTATCCGCCATGGCTCTGCAAGTCTGGGAGACGCTGAAGGAGGCGATCGTGGCCTACACAGGCCTCTCTCCGTCGACCTTCTTCACTGTCTTGGCTCTCGGCCTCGCCATTTACTATCTCATTTCCAGTTTCTTCGCTCCCTCCGACTACGGAACCCACACTAGAGACTTGGGGGAGCAGCTCCAGCCTCTCCCTCCGCCTGTCCAAGTCGGTGAGATTTCTGAAGATGACTTGAAGCAATACGATGGCTCCGATTCTAAGAAGCCTCTGCTCATGGCTATCAAGGGCCAGATCTACGATGTTTCCCAGAGCAGGATGTTCTATGGACCCGGGGGGCCCTATGCCCTTTTTGCTGGAAAGGATGCCAGCAGAGCTCTTGCAAAAATGTCTTTTGAAGAGAAAGATCTGACTGGGGATATCTCTGGTCTCGGTCCATTCGAACTCGAAGCCTTGCAGGACTGGGAATACAAATTCATGAGCAAATACGTCAAAGTTGGGACAGTCAAGAAGCCAGTTGCCGAAGGTGATGCTGCACCTGCTGCGGGCGAACCTGCAGAATCAAGCACTGCAGAAGTTAGCAAACCGGCCGAAGACAATCCCTCAGAATCTCGAGCTGATAAAGCTGAGGAAACCCCCGCCGTTGCCAATGTTGAATAATATTTTGCAGACTGCAGACGCCCCTTACCGACGGATATACGAGAAGAGAACAATGTATGTGTGCTCATGTTTCAGTAATCTTGTTTCATAGATAAGTTAAATCGAGTTGTGTAGGATGATGATATTACAGGTGGGGTTAAGACTTGGTTTATGTTTAATCTTGTTCAATAAACTTCTGACAATAAGATAATAGTCTTTGAATTTGGAAATGGGACTGAGGCTCTCTTTTCTCAATTTTTTTTTCCTTTTCTGATTGGAACTGAAAGTATGAACCAGTGAATAACAATATATAGGGATTAACAATTC ATGGCTCTGCAAGTCTGGGAGACGCTGAAGGAGGCGATCGTGGCCTACACAGGCCTCTCTCCGTCGACCTTCTTCACTGTCTTGGCTCTCGGCCTCGCCATTTACTATCTCATTTCCAGTTTCTTCGCTCCCTCCGACTACGGAACCCACACTAGAGACTTGGGGGAGCAGCTCCAGCCTCTCCCTCCGCCTGTCCAAGTCGGTGAGATTTCTGAAGATGACTTGAAGCAATACGATGGCTCCGATTCTAAGAAGCCTCTGCTCATGGCTATCAAGGGCCAGATCTACGATGTTTCCCAGAGCAGGATGTTCTATGGACCCGGGGGGCCCTATGCCCTTTTTGCTGGAAAGGATGCCAGCAGAGCTCTTGCAAAAATGTCTTTTGAAGAGAAAGATCTGACTGGGGATATCTCTGGTCTCGGTCCATTCGAACTCGAAGCCTTGCAGGACTGGGAATACAAATTCATGAGCAAATACGTCAAAGTTGGGACAGTCAAGAAGCCAGTTGCCGAAGGTGATGCTGCACCTGCTGCGGGCGAACCTGCAGAATCAAGCACTGCAGAAGTTAGCAAACCGGCCGAAGACAATCCCTCAGAATCTCGAGCTGATAAAGCTGAGGAAACCCCCGCCGTTGCCAATGTTGAATAA MALQVWETLKEAIVAYTGLSPSTFFTVLALGLAIYYLISSFFAPSDYGTHTRDLGEQLQPLPPPVQVGEISEDDLKQYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVGTVKKPVAEGDAAPAAGEPAESSTAEVSKPAEDNPSESRADKAEETPAVANVE Homology
BLAST of Tan0002604 vs. ExPASy Swiss-Prot
Match: Q9M2Z4 (Membrane steroid-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=MSBP2 PE=1 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 4.3e-70 Identity = 143/220 (65.00%), Postives = 166/220 (75.45%), Query Frame = 0
BLAST of Tan0002604 vs. ExPASy Swiss-Prot
Match: Q9FVZ7 (Membrane steroid-binding protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MSBP1 PE=1 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 9.0e-68 Identity = 137/211 (64.93%), Postives = 164/211 (77.73%), Query Frame = 0
BLAST of Tan0002604 vs. ExPASy Swiss-Prot
Match: Q9XFM6 (Membrane steroid-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=MSBP1 PE=1 SV=2) HSP 1 Score: 252.3 bits (643), Expect = 4.9e-66 Identity = 139/215 (64.65%), Postives = 162/215 (75.35%), Query Frame = 0
BLAST of Tan0002604 vs. ExPASy Swiss-Prot
Match: Q9FVZ9 (Membrane steroid-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=MSBP2 PE=2 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 1.0e-47 Identity = 107/175 (61.14%), Postives = 121/175 (69.14%), Query Frame = 0
BLAST of Tan0002604 vs. ExPASy Swiss-Prot
Match: Q9SK39 (Probable steroid-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=MP3 PE=1 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 6.8e-23 Identity = 49/97 (50.52%), Postives = 68/97 (70.10%), Query Frame = 0
BLAST of Tan0002604 vs. NCBI nr
Match: XP_022971922.1 (membrane steroid-binding protein 2-like [Cucurbita maxima]) HSP 1 Score: 389.0 bits (998), Expect = 2.6e-104 Identity = 204/219 (93.15%), Postives = 210/219 (95.89%), Query Frame = 0
BLAST of Tan0002604 vs. NCBI nr
Match: XP_022952639.1 (membrane steroid-binding protein 2-like [Cucurbita moschata] >XP_022952640.1 membrane steroid-binding protein 2-like [Cucurbita moschata]) HSP 1 Score: 388.7 bits (997), Expect = 3.4e-104 Identity = 205/221 (92.76%), Postives = 210/221 (95.02%), Query Frame = 0
BLAST of Tan0002604 vs. NCBI nr
Match: KAG6571809.1 (Membrane steroid-binding protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011504.1 Membrane steroid-binding protein 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 387.1 bits (993), Expect = 9.8e-104 Identity = 204/221 (92.31%), Postives = 209/221 (94.57%), Query Frame = 0
BLAST of Tan0002604 vs. NCBI nr
Match: XP_023554188.1 (membrane steroid-binding protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 385.2 bits (988), Expect = 3.7e-103 Identity = 202/220 (91.82%), Postives = 209/220 (95.00%), Query Frame = 0
BLAST of Tan0002604 vs. NCBI nr
Match: XP_038888418.1 (membrane steroid-binding protein 2-like [Benincasa hispida]) HSP 1 Score: 384.0 bits (985), Expect = 8.3e-103 Identity = 199/215 (92.56%), Postives = 206/215 (95.81%), Query Frame = 0
BLAST of Tan0002604 vs. ExPASy TrEMBL
Match: A0A6J1I394 (membrane steroid-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111470596 PE=4 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 1.3e-104 Identity = 204/219 (93.15%), Postives = 210/219 (95.89%), Query Frame = 0
BLAST of Tan0002604 vs. ExPASy TrEMBL
Match: A0A6J1GMC2 (membrane steroid-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111455271 PE=4 SV=1) HSP 1 Score: 388.7 bits (997), Expect = 1.6e-104 Identity = 205/221 (92.76%), Postives = 210/221 (95.02%), Query Frame = 0
BLAST of Tan0002604 vs. ExPASy TrEMBL
Match: A0A6J1K773 (membrane steroid-binding protein 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490814 PE=4 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 8.4e-101 Identity = 198/217 (91.24%), Postives = 205/217 (94.47%), Query Frame = 0
BLAST of Tan0002604 vs. ExPASy TrEMBL
Match: A0A6J1GZX3 (membrane steroid-binding protein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459181 PE=4 SV=1) HSP 1 Score: 373.2 bits (957), Expect = 7.1e-100 Identity = 196/217 (90.32%), Postives = 204/217 (94.01%), Query Frame = 0
BLAST of Tan0002604 vs. ExPASy TrEMBL
Match: A0A0A0LIG2 (Cytochrome b5 heme-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G915110 PE=4 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 1.6e-96 Identity = 190/215 (88.37%), Postives = 199/215 (92.56%), Query Frame = 0
BLAST of Tan0002604 vs. TAIR 10
Match: AT3G48890.1 (membrane-associated progesterone binding protein 3 ) HSP 1 Score: 265.8 bits (678), Expect = 3.1e-71 Identity = 143/220 (65.00%), Postives = 166/220 (75.45%), Query Frame = 0
BLAST of Tan0002604 vs. TAIR 10
Match: AT5G52240.1 (membrane steroid binding protein 1 ) HSP 1 Score: 252.3 bits (643), Expect = 3.5e-67 Identity = 139/215 (64.65%), Postives = 162/215 (75.35%), Query Frame = 0
BLAST of Tan0002604 vs. TAIR 10
Match: AT5G52240.2 (membrane steroid binding protein 1 ) HSP 1 Score: 250.8 bits (639), Expect = 1.0e-66 Identity = 128/171 (74.85%), Postives = 142/171 (83.04%), Query Frame = 0
BLAST of Tan0002604 vs. TAIR 10
Match: AT2G24940.1 (membrane-associated progesterone binding protein 2 ) HSP 1 Score: 109.0 bits (271), Expect = 4.8e-24 Identity = 49/97 (50.52%), Postives = 68/97 (70.10%), Query Frame = 0
BLAST of Tan0002604 vs. TAIR 10
Match: AT4G14965.1 (membrane-associated progesterone binding protein 4 ) HSP 1 Score: 77.0 bits (188), Expect = 2.0e-14 Identity = 35/93 (37.63%), Postives = 54/93 (58.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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