Tan0002523 (gene) Snake gourd v1

Overview


Name	Tan0002523
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Cysteine-rich and transmembrane domain-containing protein A-like
Location	LG01: 5763982 .. 5766415 (+)
RNA-Seq Expression	Tan0002523
Synteny	Tan0002523

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTACGAAAACTGATTAGAGATAAGCCTTCCCGGATTAGCAGCAAACAAACACAACCTTCTCTCTCGGTAATCTCAACTCTCCTTTTTGGATTCATATATATAAATCCTTCAGATCCCACTCTTCTTCTCTGTCCTTCCCTTCGTAGACCTTCGCTGTCTTCTCCATTGACTCTTTCTCCTTTTGGGTTTTTTTTCTTTTTCCTCTGTTAGTTTCTGTTTCTCCGATTTCCGGCCGTTTTCGTCGTCGTCGTCGTTCGGCGGATAACGGGATTGATTGGTTTTGGAGTGTGGTGGAAGAGAGATCTCTGGTTGATTTCAAGAGGAAGAAGGGATGAGTTATTATAATCAAGGTCAGCCTCCGATTGGAGTTCCTCCGCCTCAAGGTATTTCGCTGTTTCTATTGTGTTTTTCGTGTTGGATTGATGGTGGATGTGGTTTACGATTGTAGATCTGTGTGTTGTTTGTGTTGATTTAGGGTTTTGTGGTGGTTTTTTCAGGTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATACCCGCCACAAGGCTATCCTCCTCCCGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCATTACGCTCAGCCTCCTCCTCCTCAACAGCAAAGTAGCGGCCCTGGTTGCTTGGAAGGCTGGTAAATTCTCTCTCTCTCTCTCTCTCTAGATTTCTCTTTCTTTTTGTTCATGGTGGTTGAAATAGGATCTGAACTGAATCGGATTCCGACGATATGGTATCGGAAACTGAGTTCAAGAACGAGTCAATGGCATCGTCTGGTGAAGCGTGTAGCCTCGTTTTCATTGGAGACGTTTTTCTTGGAAGTATCGCCTCGATGAAATCCCCAAATTGACCCTCAAGTCGCCTCTATATTACACTTACCATCATTCTTCCTGTTTTTCTATTTTATTTTAATTTAGAAAAATTGCAAAAACCACCTCTTACGTTTTTTTTCAATTTGACCATTCACCCCCATAAACCCGTGAAATTTTACCGTCGAACTTTGGAACCCACCCTGAAAAGATTGATACAATTAATCCCTCAAACTATTATTAGATTGTTACCATTTAATTAAACTTTTTTTAATTAATATTGATTTTCATATCGTTGTTAATGGTTTGGATTTGGGTTTGATTGTAACAATTCTATAGTCTTGGGTCTGATCCTAACAATCTGTTTAGGGATATGGTTTTTTATTTTTTGTGGTATTTAAGAACTTATTTAATGGATCAAATTGAATGTTTTCACACTAATTTTAACACCTGAGCATAACTCAATTCATACAACTTATGTACTTTCACCAAGAAATCAAGGTTGGAATATCGCAACCCAAATCTGGTTGAACTTAAAAAAAAATGAATGTTCTAACATTCTGGGGTGTTTTTTTTTTTTCTTCTTCAAAATTTGAGTTAGATTGTTATTTATTATTTGTTGTTTGGAGAATTTTGTACTGAAATTGAGTTTGATATGAAACTTTGCAGTTTGGCTGCGCTGTGCTGTTGCTGCCTGCTTGACGCCTGCTTCTAAAGAGAATCATCCATTTGCAATTATGTTGTGCTTCAGATTCAAGAGCGATCTCTCAGAGAACCTTTCTCTGAAAGAAAAAGAAGAAGAAGAAGAAAAAAGAATTGAAAAACAATTGAGTTGTTGATGATTTTGGGGATTCATTGTGAAGTTTTAATTTCTTGTGTTTTATAATATTATAGTCTTTAGTGCTTGTTCTTCGTTTCCTCCTGCTCTTCTCTCTAAAATTTTCTTATATAAATAACACCATCTCTCCCAAACTCTCTTTTTGTCTCTTGATAGCTTTCTTTTGGATCATCTGTGTTCTTGAGGTATGATTTTAAATGAACTGATTTTTGCAATTTGTGGGGGCTGTTCTAAAAAAAGTAATCTTTTAAAACTTGATTTTCTTTGTGAAATTTTAGCATAGAATTCAAATGGAGTTTCTAAGGAAGGTGAAACAGAAACCCAACAACAAAATGTGGTGATCAAAGAGGCCATAATTTTTAGATTTTTTTTAATATATAAAATTAAGAGAAATTCAATTGAAGAATTATAATAAGGCAGTTTTTGGAAGGTGGAAAGTGATAAAATTTGGAAGAGATTATAAGACAGTTTTTGAGGTTGACCATTTCAGATTGAAGATCCTTACATTTGTTGAGAGTTTGAAAGCTTGAAAAAAAAGTGTAAGTTGTGTTTGAAATTCGGTGTTCTGAATCTATTGTGTAAATTGGGTATTTTTTAAATTACTTTTGATTTGAGGTTTCAATTAGTACAGGAATGAGAGAAGGAGAATTGATTTGATTTGAGTCATTCGTTGCATCGTACAATAAAATAACATGTGGCAAAGTTGGGAGCGTCGAGTGAGTTAATGTGGCCAAAGTTGGGAGCGTCG

mRNA sequence

ATTACGAAAACTGATTAGAGATAAGCCTTCCCGGATTAGCAGCAAACAAACACAACCTTCTCTCTCGGTAATCTCAACTCTCCTTTTTGGATTCATATATATAAATCCTTCAGATCCCACTCTTCTTCTCTGTCCTTCCCTTCGTAGACCTTCGCTGTCTTCTCCATTGACTCTTTCTCCTTTTGGGTTTTTTTTCTTTTTCCTCTGTTAGTTTCTGTTTCTCCGATTTCCGGCCGTTTTCGTCGTCGTCGTCGTTCGGCGGATAACGGGATTGATTGGTTTTGGAGTGTGGTGGAAGAGAGATCTCTGGTTGATTTCAAGAGGAAGAAGGGATGAGTTATTATAATCAAGGTCAGCCTCCGATTGGAGTTCCTCCGCCTCAAGGTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATACCCGCCACAAGGCTATCCTCCTCCCGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCATTACGCTCAGCCTCCTCCTCCTCAACAGCAAAGTAGCGGCCCTGGTTGCTTGGAAGGCTGGTAAATTCTCTCTCTCTCTCTCTCTCTAGATTTCTCTTTCTTTTTGTTCATGGTGGTTGAAATAGGATCTGAACTGAATCGGATTCCGACGATATGGTATCGGAAACTGAGTTCAAGAACGAGTCAATGGCATCGTCTGGTGAAGCGTGTAGCCTCGTTTTCATTGGAGACGTTTTTCTTGGAAGTATCGCCTCGATGAAATCCCCAAATTGACCCTCAAGTCGCCTCTATATTACACTTACCATCATTCTTCCTGTTTTTCTATTTTATTTTAATTTAGAAAAATTGCAAAAACCACCTCTTACGTTTTTTTTCAATTTGACCATTCACCCCCATAAACCCGTGAAATTTTACCGTCGAACTTTGGAACCCACCCTGAAAAGATTGATACAATTAATCCCTCAAACTATTATTAGATTGTTACCATTTAATTAAACTTTTTTTAATTAATATTGATTTTCATATCGTTGTTAATGGTTTGGATTTGGGTTTGATTGTAACAATTCTATAGTCTTGGGTCTGATCCTAACAATCTGTTTAGGGATATGGTTTTTTATTTTTTGTGGTATTTAAGAACTTATTTAATGGATCAAATTGAATGTTTTCACACTAATTTTAACACCTGAGCATAACTCAATTCATACAACTTATGTACTTTCACCAAGAAATCAAGGTTGGAATATCGCAACCCAAATCTGGTTGAACTTAAAAAAAAATGAATGTTCTAACATTCTGGGGTGTTTTTTTTTTTTCTTCTTCAAAATTTGAGTTAGATTGTTATTTATTATTTGTTGTTTGGAGAATTTTGTACTGAAATTGAGTTTGATATGAAACTTTGCAGTTTGGCTGCGCTGTGCTGTTGCTGCCTGCTTGACGCCTGCTTCTAAAGAGAATCATCCATTTGCAATTATGTTGTGCTTCAGATTCAAGAGCGATCTCTCAGAGAACCTTTCTCTGAAAGAAAAAGAAGAAGAAGAAGAAAAAAGAATTGAAAAACAATTGAGTTGTTGATGATTTTGGGGATTCATTGTGAAGTTTTAATTTCTTGTGTTTTATAATATTATAGTCTTTAGTGCTTGTTCTTCGTTTCCTCCTGCTCTTCTCTCTAAAATTTTCTTATATAAATAACACCATCTCTCCCAAACTCTCTTTTTGTCTCTTGATAGCTTTCTTTTGGATCATCTGTGTTCTTGAGGTATGATTTTAAATGAACTGATTTTTGCAATTTGTGGGGGCTGTTCTAAAAAAAGTAATCTTTTAAAACTTGATTTTCTTTGTGAAATTTTAGCATAGAATTCAAATGGAGTTTCTAAGGAAGGTGAAACAGAAACCCAACAACAAAATGTGGTGATCAAAGAGGCCATAATTTTTAGATTTTTTTTAATATATAAAATTAAGAGAAATTCAATTGAAGAATTATAATAAGGCAGTTTTTGGAAGGTGGAAAGTGATAAAATTTGGAAGAGATTATAAGACAGTTTTTGAGGTTGACCATTTCAGATTGAAGATCCTTACATTTGTTGAGAGTTTGAAAGCTTGAAAAAAAAGTGTAAGTTGTGTTTGAAATTCGGTGTTCTGAATCTATTGTGTAAATTGGGTATTTTTTAAATTACTTTTGATTTGAGGTTTCAATTAGTACAGGAATGAGAGAAGGAGAATTGATTTGATTTGAGTCATTCGTTGCATCGTACAATAAAATAACATGTGGCAAAGTTGGGAGCGTCGAGTGAGTTAATGTGGCCAAAGTTGGGAGCGTCG

Coding sequence (CDS)

ATGAGTTATTATAATCAAGGTCAGCCTCCGATTGGAGTTCCTCCGCCTCAAGGTTATCCGCCGGAAGGTTATCCGAAGGATGCTTATCCGCCGCCGGGATACCCGCCACAAGGCTATCCTCCTCCCGGTGCTTATCCGCCGCAGGGATATCCTCCGCCTTACGCTCCTCATTACGCTCAGCCTCCTCCTCCTCAACAGCAAAGTAGCGGCCCTGGTTGCTTGGAAGGCTGGTAA

Protein sequence

MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPHYAQPPPPQQQSSGPGCLEGW

Homology

[Close]

BLAST of Tan0002523 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-20
Identity = 59/85 (69.41%), Postives = 60/85 (70.59%), Query Frame = 0


Query: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYP---------PPGAYPPQGYP 60
          MS YN  QPP+GVPPPQGYPPEGYPKDAYPP GYPPQGYP         P   YP QGYP
Sbjct: 1  MSQYN--QPPVGVPPPQGYPPEGYPKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGYP 60

Query: 61 PPYAPHYAQPPPPQQQSSGPGCLEG 77
          PPYAP Y  PP  QQQ S PG LEG
Sbjct: 61 PPYAPQYPPPPQHQQQQSSPGFLEG 83

[Close]

BLAST of Tan0002523 vs. ExPASy Swiss-Prot
Match: Q9FJW3 (Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis thaliana OX=3702 GN=WIH1 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.8e-10
Identity = 45/76 (59.21%), Postives = 48/76 (63.16%), Query Frame = 0


Query: 4  YNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPG---AYPPQGYPPPYAPHYAQ 63
          Y+Q Q P+G PPPQGYP    PKD YPP GYPP GYPPPG    YP QGYPP   P Y+Q
Sbjct: 2  YHQEQHPVGAPPPQGYP----PKDGYPPAGYPPAGYPPPGYAQGYPAQGYPP---PQYSQ 61

Query: 64 PPPPQQQSSGPGCLEG 77
           P   QQ    G LEG
Sbjct: 62 AP---QQKQNAGMLEG 67

[Close]

BLAST of Tan0002523 vs. ExPASy Swiss-Prot
Match: Q8LCL8 (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana OX=3702 GN=At3g57160 PE=3 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 5.8e-09
Identity = 46/85 (54.12%), Postives = 48/85 (56.47%), Query Frame = 0


Query: 5  NQGQPPIGVPPPQGYPPEGYPKDAYPPPG--YPPQGYPPPGAYPPQGYPPPYAPHYAQP- 64
          +Q  P +GVPP   YP EG PKDAYPPPG  YP QGYPPP  YP QGYPP   P    P 
Sbjct: 2  SQQPPAVGVPPSHAYPAEGPPKDAYPPPGQPYPQQGYPPPQGYPQQGYPPQGYPPQGYPE 61

Query: 65 --------PPPQQQSS--GPGCLEG 77
                  PP QQQ     PG LEG
Sbjct: 62 QGYPQQGYPPQQQQQQKHSPGMLEG 86

[Close]

BLAST of Tan0002523 vs. ExPASy Swiss-Prot
Match: P31356 (Rhodopsin OS=Todarodes pacificus OX=6637 GN=RHO PE=1 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 1.2e-06
Identity = 38/69 (55.07%), Postives = 40/69 (57.97%), Query Frame = 0


Query: 1   MSYYNQGQPPIG-VPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPHYA 60
           M       PP G  PPPQGYPP+GYP   YPP GYPPQGYPP    PPQG PP  AP  A
Sbjct: 381 MQQQQAAYPPQGYAPPPQGYPPQGYPPQGYPPQGYPPQGYPP----PPQGAPPQGAPPAA 440

Query: 61  QPPPPQQQS 69
            P     Q+
Sbjct: 441 PPQGVDNQA 445

[Close]

BLAST of Tan0002523 vs. ExPASy Swiss-Prot
Match: Q17094 (Rhodopsin (Fragment) OS=Alloteuthis subulata OX=54069 GN=RHO PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.6e-06
Identity = 40/65 (61.54%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 1   MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPHYAQ 60
           M    Q QP     PPQGYPP+GYP    PP GYPPQGYPP G YPPQGYPPP      Q
Sbjct: 373 MQAQQQQQPAY---PPQGYPPQGYPPP--PPQGYPPQGYPPQG-YPPQGYPPPPQGPPPQ 431

Query: 61  PPPPQ 66
            PPPQ
Sbjct: 433 GPPPQ 431

[Close]

BLAST of Tan0002523 vs. NCBI nr
Match: TYK29454.1 (cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa])

HSP 1 Score: 151.4 bits (381), Expect = 3.2e-33
Identity = 75/77 (97.40%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPHYAQ 60
          MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAP YAQ
Sbjct: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQ 60

Query: 61 PPPPQQQSSGPGCLEGW 78
           PPPQQQSSGPGCLEGW
Sbjct: 61 -PPPQQQSSGPGCLEGW 76

[Close]

BLAST of Tan0002523 vs. NCBI nr
Match: XP_011652909.1 (cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus] >KGN52747.1 hypothetical protein Csa_015060 [Cucumis sativus])

HSP 1 Score: 148.3 bits (373), Expect = 2.7e-32
Identity = 73/76 (96.05%), Postives = 73/76 (96.05%), Query Frame = 0


Query: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPHYAQ 60
          MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAP YAQ
Sbjct: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQ 60

Query: 61 PPPPQQQSSGPGCLEG 77
          PPP QQ SSGPGCLEG
Sbjct: 61 PPPQQQHSSGPGCLEG 76

[Close]

BLAST of Tan0002523 vs. NCBI nr
Match: XP_008454408.1 (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo])

HSP 1 Score: 146.7 bits (369), Expect = 8.0e-32
Identity = 74/76 (97.37%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPHYAQ 60
          MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAP YAQ
Sbjct: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQ 60

Query: 61 PPPPQQQSSGPGCLEG 77
           PPPQQQSSGPGCLEG
Sbjct: 61 -PPPQQQSSGPGCLEG 75

[Close]

BLAST of Tan0002523 vs. NCBI nr
Match: XP_038905303.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa hispida])

HSP 1 Score: 142.9 bits (359), Expect = 1.2e-30
Identity = 71/76 (93.42%), Postives = 71/76 (93.42%), Query Frame = 0


Query: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPHYAQ 60
          MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPP GYPPPYAP YAQ
Sbjct: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPPGYPPPYAPQYAQ 60

Query: 61 PPPPQQQSSGPGCLEG 77
           PP QQ SSGPGCLEG
Sbjct: 61 APPQQQSSSGPGCLEG 76

[Close]

BLAST of Tan0002523 vs. NCBI nr
Match: KAA0044325.1 (cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa])

HSP 1 Score: 140.2 bits (352), Expect = 7.5e-30
Identity = 75/95 (78.95%), Postives = 75/95 (78.95%), Query Frame = 0


Query: 1  MSYYNQGQPPIGVPPP------------------QGYPPEGYPKDAYPPPGYPPQGYPPP 60
          MSYYNQGQPPIGVPPP                  QGYPPEGYPKDAYPPPGYPPQGYPPP
Sbjct: 1  MSYYNQGQPPIGVPPPQDLCVDLWFWWFFFFFLFQGYPPEGYPKDAYPPPGYPPQGYPPP 60

Query: 61 GAYPPQGYPPPYAPHYAQPPPPQQQSSGPGCLEGW 78
          GAYPPQGYPPPYAP YAQ PPPQQQSSGPGCLEGW
Sbjct: 61 GAYPPQGYPPPYAPQYAQ-PPPQQQSSGPGCLEGW 94

[Close]

BLAST of Tan0002523 vs. ExPASy TrEMBL
Match: A0A5D3E0V1 (Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00480 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.6e-33
Identity = 75/77 (97.40%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPHYAQ 60
          MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAP YAQ
Sbjct: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQ 60

Query: 61 PPPPQQQSSGPGCLEGW 78
           PPPQQQSSGPGCLEGW
Sbjct: 61 -PPPQQQSSGPGCLEGW 76

[Close]

BLAST of Tan0002523 vs. ExPASy TrEMBL
Match: A0A0A0KWC5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000680 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.3e-32
Identity = 73/76 (96.05%), Postives = 73/76 (96.05%), Query Frame = 0


Query: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPHYAQ 60
          MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAP YAQ
Sbjct: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQ 60

Query: 61 PPPPQQQSSGPGCLEG 77
          PPP QQ SSGPGCLEG
Sbjct: 61 PPPQQQHSSGPGCLEG 76

[Close]

BLAST of Tan0002523 vs. ExPASy TrEMBL
Match: A0A1S3BZB4 (cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo OX=3656 GN=LOC103494821 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.9e-32
Identity = 74/76 (97.37%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPHYAQ 60
          MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAP YAQ
Sbjct: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPQYAQ 60

Query: 61 PPPPQQQSSGPGCLEG 77
           PPPQQQSSGPGCLEG
Sbjct: 61 -PPPQQQSSGPGCLEG 75

[Close]

BLAST of Tan0002523 vs. ExPASy TrEMBL
Match: A0A5A7TSG5 (Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00470 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 3.6e-30
Identity = 75/95 (78.95%), Postives = 75/95 (78.95%), Query Frame = 0


Query: 1  MSYYNQGQPPIGVPPP------------------QGYPPEGYPKDAYPPPGYPPQGYPPP 60
          MSYYNQGQPPIGVPPP                  QGYPPEGYPKDAYPPPGYPPQGYPPP
Sbjct: 1  MSYYNQGQPPIGVPPPQDLCVDLWFWWFFFFFLFQGYPPEGYPKDAYPPPGYPPQGYPPP 60

Query: 61 GAYPPQGYPPPYAPHYAQPPPPQQQSSGPGCLEGW 78
          GAYPPQGYPPPYAP YAQ PPPQQQSSGPGCLEGW
Sbjct: 61 GAYPPQGYPPPYAPQYAQ-PPPQQQSSGPGCLEGW 94

[Close]

BLAST of Tan0002523 vs. ExPASy TrEMBL
Match: A0A498IVV0 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_034389 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.6e-28
Identity = 67/77 (87.01%), Postives = 69/77 (89.61%), Query Frame = 0


Query: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPGAYPPQGYPPPYAPHYAQ 60
          MSYYNQ QPP+GVPPPQGYPPEGYPKDAYPPPGYPPQGYPPP  Y PQGYPPPYAP YAQ
Sbjct: 1  MSYYNQQQPPVGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPQGY-PQGYPPPYAPQYAQ 60

Query: 61 PPPPQQQSSGPGCLEGW 78
          PPP QQQSS  GC+EGW
Sbjct: 61 PPPQQQQSSSSGCMEGW 76

[Close]

BLAST of Tan0002523 vs. TAIR 10
Match: AT2G41420.1 (proline-rich family protein )

HSP 1 Score: 100.1 bits (248), Expect = 8.0e-22
Identity = 59/85 (69.41%), Postives = 60/85 (70.59%), Query Frame = 0


Query: 1  MSYYNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYP---------PPGAYPPQGYP 60
          MS YN  QPP+GVPPPQGYPPEGYPKDAYPP GYPPQGYP         P   YP QGYP
Sbjct: 1  MSQYN--QPPVGVPPPQGYPPEGYPKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGYP 60

Query: 61 PPYAPHYAQPPPPQQQSSGPGCLEG 77
          PPYAP Y  PP  QQQ S PG LEG
Sbjct: 61 PPYAPQYPPPPQHQQQQSSPGFLEG 83

[Close]

BLAST of Tan0002523 vs. TAIR 10
Match: AT5G67600.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 1.3e-11
Identity = 45/76 (59.21%), Postives = 48/76 (63.16%), Query Frame = 0


Query: 4  YNQGQPPIGVPPPQGYPPEGYPKDAYPPPGYPPQGYPPPG---AYPPQGYPPPYAPHYAQ 63
          Y+Q Q P+G PPPQGYP    PKD YPP GYPP GYPPPG    YP QGYPP   P Y+Q
Sbjct: 2  YHQEQHPVGAPPPQGYP----PKDGYPPAGYPPAGYPPPGYAQGYPAQGYPP---PQYSQ 61

Query: 64 PPPPQQQSSGPGCLEG 77
           P   QQ    G LEG
Sbjct: 62 AP---QQKQNAGMLEG 67

[Close]

BLAST of Tan0002523 vs. TAIR 10
Match: AT3G49845.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 3.9e-08
Identity = 43/85 (50.59%), Postives = 44/85 (51.76%), Query Frame = 0


Query: 4  YNQGQPPIGVPPPQGYPP-EGYPKDAYPPP-----------GYPPQGYPPP-----GAYP 63
          Y   Q P+  PPPQGYPP EGYP   YPPP           GYPP GYPPP       YP
Sbjct: 3  YQDPQHPVSAPPPQGYPPKEGYPPAGYPPPAGYPPPQYPQAGYPPAGYPPPQQGYGQGYP 62

Query: 64 PQGYPPPYAPHYAQPPPPQQQSSGP 72
           QGYPP   P Y Q  PPQ    GP
Sbjct: 63 AQGYPP---PQYPQGHPPQYPYQGP 84

[Close]

BLAST of Tan0002523 vs. TAIR 10
Match: AT5G45350.1 (proline-rich family protein )

HSP 1 Score: 52.8 bits (125), Expect = 1.5e-07
Identity = 38/61 (62.30%), Postives = 39/61 (63.93%), Query Frame = 0


Query: 7  GQPPIGVPPPQGYPPEGYPKDAYPPP--GYPPQGYPPPGAYPPQ--GYPPPYAPHYAQPP 64
          G PP G PPP  YPP GYP+  YPPP   YPP GY PPGAYPP   GYPP  AP Y   P
Sbjct: 15 GYPPAGYPPPGAYPPAGYPQQGYPPPPGAYPPAGY-PPGAYPPAPGGYPP--APGYGGYP 72

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BLAST of Tan0002523 vs. TAIR 10
Match: AT5G45350.2 (proline-rich family protein )

HSP 1 Score: 52.8 bits (125), Expect = 1.5e-07
Identity = 38/61 (62.30%), Postives = 39/61 (63.93%), Query Frame = 0


Query: 7  GQPPIGVPPPQGYPPEGYPKDAYPPP--GYPPQGYPPPGAYPPQ--GYPPPYAPHYAQPP 64
          G PP G PPP  YPP GYP+  YPPP   YPP GY PPGAYPP   GYPP  AP Y   P
Sbjct: 15 GYPPAGYPPPGAYPPAGYPQQGYPPPPGAYPPAGY-PPGAYPPAPGGYPP--APGYGGYP 72

The following BLAST results are available for this feature:

BLAST of Tan0002523 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8M0	1.1e-20	69.41	Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis th...	[more]
Q9FJW3	1.8e-10	59.21	Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis th...	[more]
Q8LCL8	5.8e-09	54.12	Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thali...	[more]
P31356	1.2e-06	55.07	Rhodopsin OS=Todarodes pacificus OX=6637 GN=RHO PE=1 SV=2	[more]
Q17094	1.6e-06	61.54	Rhodopsin (Fragment) OS=Alloteuthis subulata OX=54069 GN=RHO PE=3 SV=1	[more]

BLAST of Tan0002523 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK29454.1	3.2e-33	97.40	cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo v...	[more]
XP_011652909.1	2.7e-32	96.05	cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus]...	[more]
XP_008454408.1	8.0e-32	97.37	PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cuc...	[more]
XP_038905303.1	1.2e-30	93.42	cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa h...	[more]
KAA0044325.1	7.5e-30	78.95	cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo v...	[more]

BLAST of Tan0002523 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E0V1	1.6e-33	97.40	Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo...	[more]
A0A0A0KWC5	1.3e-32	96.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000680 PE=4 SV=1	[more]
A0A1S3BZB4	3.9e-32	97.37	cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo...	[more]
A0A5A7TSG5	3.6e-30	78.95	Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo...	[more]
A0A498IVV0	2.6e-28	87.01	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_034389 PE=4 SV=1	[more]

BLAST of Tan0002523 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41420.1	8.0e-22	69.41	proline-rich family protein	[more]
AT5G67600.1	1.3e-11	59.21	unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures;...	[more]
AT3G49845.1	3.9e-08	50.59	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G45350.1	1.5e-07	62.30	proline-rich family protein	[more]
AT5G45350.2	1.5e-07	62.30	proline-rich family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00239	RHODOPSNTAIL	coord: 15..26 score: 77.78 coord: 28..40 score: 44.87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..77
None	No IPR available	PANTHER	PTHR31568:SF83	UV-INDUCED PROTEIN UVI15-RELATED	coord: 1..76
IPR044850	Cysteine-rich and transmembrane domain-containing protein WIH1/2-like	PANTHER	PTHR31568	RCG49325, ISOFORM CRA_A	coord: 1..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0002523.1	Tan0002523.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane