Tan0002508 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACTGCTTGAAAGTTCCATCAAATCAAGATCAAGATCAAATTCAAAATCAAAATCAAATCATCTTTCTACACGCCGAGGAAAAGGATTTTGAGACGATTTCATAATTGCGATTACTTTTGCAGATTGATTAGAGAGCCCTAATTTGACGCCGGAGATGATGCTCGTGTCGGTAGTAGCGGAGCTTCTGGAGGAGTACACGGTGCTGCTCGCGGAGGTGCTCCGACAGCTCTTCAATTCCGCGCCATTTCCTCGCCGAGTCCGATTTCTCATCCTTCACAATCTTCCTTTCGCCGATAACTCCTCCTCTGCCCTAACTCACTCCAATCGGCGAAGCGGCGTAGCCGCGTAGGCGATTTTTGTAATTCTCTTCTCTCACAGCTTGTATCATATATTATAGCTCGAGTTTCTTCTTCGTCTTGTTCTGGTTTGTATCTGGATTGTTCTTCGAATTTGAGATTATGCCGATTTTGTTCTTTTTTAATCTTGTTCTTCGAATTTGAGTGAGGAGTTTGAGCGCAGTTCTTTTTTGGATTTCGATTTTTTCGGATGAAGGTTAATTGGATTAGAAGTAATTGATTTTGAGAATTTGGATCTCTGTTTTCCTCTGTTTGAATTTGGAAACGGATTGGGGGCTGGCAACTGAGATGGCCACTGATTAATCGGCGGATCTTTTTCATTGGAAAAATTAATCAACAAGCTGAGGTTGAATTCAAATTTAGTCCGACGACTTTGAAGTTTGATGATGGAATCTTAACAGTTATCAGCTCCTGAACTTCAACAACTTTTGAATGATTATCATTAATTTCTCAAGAATTCGGGTCGTTAATATCATTATTTTTCTAAATATAAAATATATTTTTTAATACCATAGAACTTGGGAGATTTGGCCCACAAGAGGAG CACTGCTTGAAAGTTCCATCAAATCAAGATCAAGATCAAATTCAAAATCAAAATCAAATCATCTTTCTACACGCCGAGGAAAAGGATTTTGAGACGATTTCATAATTGCGATTACTTTTGCAGATTGATTAGAGAGCCCTAATTTGACGCCGGAGATGATGCTCGTGTCGGTAGTAGCGGAGCTTCTGGAGGAGTACACGGTGCTGCTCGCGGAGGTGCTCCGACAGCTCTTCAATTCCGCGCCATTTCCTCGCCGAGTCCGATTTCTCATCCTTCACAATCTTCCTTTCGCCGATAACTCCTCCTCTGCCCTAACTCACTCCAATCGGCGAAGCGGCGTAGCCGCGTAGGCGATTTTTGTAATTCTCTTCTCTCACAGCTTGTATCATATATTATAGCTCGAGTTTCTTCTTCGTCTTGTTCTGGTTTGTATCTGGATTGTTCTTCGAATTTGAGATTATGCCGATTTTGTTCTTTTTTAATCTTGTTCTTCGAATTTGAGTGAGGAGTTTGAGCGCAGTTCTTTTTTGGATTTCGATTTTTTCGGATGAAGGTTAATTGGATTAGAAGTAATTGATTTTGAGAATTTGGATCTCTGTTTTCCTCTGTTTGAATTTGGAAACGGATTGGGGGCTGGCAACTGAGATGGCCACTGATTAATCGGCGGATCTTTTTCATTGGAAAAATTAATCAACAAGCTGAGGTTGAATTCAAATTTAGTCCGACGACTTTGAAGTTTGATGATGGAATCTTAACAGTTATCAGCTCCTGAACTTCAACAACTTTTGAATGATTATCATTAATTTCTCAAGAATTCGGGTCGTTAATATCATTATTTTTCTAAATATAAAATATATTTTTTAATACCATAGAACTTGGGAGATTTGGCCCACAAGAGGAG ATGATGCTCGTGTCGGTAGTAGCGGAGCTTCTGGAGGAGTACACGGTGCTGCTCGCGGAGGTGCTCCGACAGCTCTTCAATTCCGCGCCATTTCCTCGCCGAGTCCGATTTCTCATCCTTCACAATCTTCCTTTCGCCGATAACTCCTCCTCTGCCCTAACTCACTCCAATCGGCGAAGCGGCGTAGCCGCGTAG MMLVSVVAELLEEYTVLLAEVLRQLFNSAPFPRRVRFLILHNLPFADNSSSALTHSNRRSGVAA Homology
BLAST of Tan0002508 vs. NCBI nr
Match: XP_022970120.1 (uncharacterized protein LOC111469109 [Cucurbita maxima]) HSP 1 Score: 99.0 bits (245), Expect = 1.6e-17 Identity = 55/67 (82.09%), Postives = 59/67 (88.06%), Query Frame = 0
BLAST of Tan0002508 vs. NCBI nr
Match: XP_022928978.1 (uncharacterized protein LOC111435715 [Cucurbita moschata]) HSP 1 Score: 96.7 bits (239), Expect = 7.9e-17 Identity = 55/73 (75.34%), Postives = 59/73 (80.82%), Query Frame = 0
BLAST of Tan0002508 vs. NCBI nr
Match: XP_023520510.1 (uncharacterized protein LOC111783933 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 95.9 bits (237), Expect = 1.3e-16 Identity = 54/69 (78.26%), Postives = 59/69 (85.51%), Query Frame = 0
BLAST of Tan0002508 vs. NCBI nr
Match: KAG7017064.1 (hypothetical protein SDJN02_22176, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 95.5 bits (236), Expect = 1.8e-16 Identity = 55/76 (72.37%), Postives = 59/76 (77.63%), Query Frame = 0
BLAST of Tan0002508 vs. NCBI nr
Match: XP_022159655.1 (uncharacterized protein LOC111025999 [Momordica charantia]) HSP 1 Score: 89.0 bits (219), Expect = 1.6e-14 Identity = 47/52 (90.38%), Postives = 50/52 (96.15%), Query Frame = 0
BLAST of Tan0002508 vs. ExPASy TrEMBL
Match: A0A6J1I1Z0 (uncharacterized protein LOC111469109 OS=Cucurbita maxima OX=3661 GN=LOC111469109 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 7.7e-18 Identity = 55/67 (82.09%), Postives = 59/67 (88.06%), Query Frame = 0
BLAST of Tan0002508 vs. ExPASy TrEMBL
Match: A0A6J1EQP1 (uncharacterized protein LOC111435715 OS=Cucurbita moschata OX=3662 GN=LOC111435715 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 3.8e-17 Identity = 55/73 (75.34%), Postives = 59/73 (80.82%), Query Frame = 0
BLAST of Tan0002508 vs. ExPASy TrEMBL
Match: A0A6J1DZC9 (uncharacterized protein LOC111025999 OS=Momordica charantia OX=3673 GN=LOC111025999 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 8.0e-15 Identity = 47/52 (90.38%), Postives = 50/52 (96.15%), Query Frame = 0
BLAST of Tan0002508 vs. ExPASy TrEMBL
Match: A0A1S3AUP0 (uncharacterized protein LOC103482883 OS=Cucumis melo OX=3656 GN=LOC103482883 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.7e-12 Identity = 41/51 (80.39%), Postives = 48/51 (94.12%), Query Frame = 0
BLAST of Tan0002508 vs. ExPASy TrEMBL
Match: A0A0A0KM75 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146820 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 6.3e-12 Identity = 40/51 (78.43%), Postives = 47/51 (92.16%), Query Frame = 0
BLAST of Tan0002508 vs. TAIR 10
Match: AT1G33055.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: anaerobic respiration; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; Has 20 Blast hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 58.5 bits (140), Expect = 2.2e-09 Identity = 27/51 (52.94%), Postives = 43/51 (84.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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