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Tan0002505 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATCATTGTCCGAACTCGAATCGGGTCTACTTTCAGAAGGGTTCTATTCTAGGGTTTAAGCTTTTCGCTGAATTTCTGATTCTGTCAATCACGAAGACGATGACCTCCATGGCTGCACTGTCCAGAAGGCTCTGCCGCTCTCTGCTGTCGAATTCAAAAGCTTCTCATCACCACGACATCTTCCCCGTGACCTTTTGCAGTAACAACCTTTTCTTCCGCTCGGTCTCAGACATCAGTGACTCCAGTTTTGATTCGGACATGGACTTGGACTCGCATTCAGTAACTAATCGACCTTCTGTCTCACCGTCCTCGTCCCAGTCATCAACTCAGATGAGAACGATCTACAATCGACCACTGGAAAATGGCCTTGATGCCGGCATTTATAAGGTACATTGATGTGGGAGTGTATTGGGAATTTCGATTCTCGATGTTTGATTGCTTACATTTTCGTCTTAATAGTTTTCATGTTTGCGTGAAGGCTATATTGGTGGGTCAGGCGGGGCAGAAGCCATTGCAGAAGCAGCTGAAGAGTGGTAGAACAGTGACGCTGTTATCAGTAGGGACGGGTGGGATTCGTAATAATCGGAGACCCTTGGCTAATGAGGAACCGAAAGAGTATGCAAATCGATGCGCAGTTCAGTGGCATCGGGTTTCGATTTATCCTCAGAGACTAGGCGATATTGTCATGAAGCACGTCGTGCCTGGGTAAGCTTTTCGGTTTTAACCATTAATCAATCTACCTGAGATAATGCCATGGAGATTCATTTATATTCTGCAATCAATTGCCGTGAATATCGTGATAGTGGCAATGGATATTAACGAGCTTGTGTTATTTTAGTAAAGTGGTATGAAGCTCCACTAATTAATTTCAATTTGAAACTGAGCCTGTTATTAACCTTGTAATGATTTTGTTTTCTGGTTATTGCAGTCTTAGTTTCCTCAATTCTTTGTTACAGCTTCATATTTACAATGTAAGTTTGTCCTTTTCAGTTCAATTTTGTATTTGGAGGGGAATTTGGAGACCAAAATTTTCACTGATCCAACAACTGGTCTTGTTCGACGTATTAGAGAAATTGCCATTCGTCGCAATGGTACTGCTCTTATTATTTTATAGTCACCTTGTTTTTATGAATATAGAGTTCCACATATATTCTGGCTACTTAAACTACATACCATCAGTGTCATCTTTAATTAAAAAAAAAAAATAGGTAAGTTTTGTTTTGAACTGTGATGAAGGTACAGCCTCTTTACAATGCAAATGTCCTTTTTTGTGTGTTACATTTGTTTCTTTTTAAATTGAAAAAAGCAAATTTATTTTTCTTGTATAGCTGAAAAACCTATGTGGGTACTGACTGGTGTTTCATTTTTTTTCATTTCCCGATCCTCTGTGTATCGGAGAGATTATAAAGAATTTGATAGGAAGTTGATAGTTTTTTTTGCGACTTGCCATTCAAGCATGTCGAAATTAATGGCCCTAGGAGAATTACATATGATCTCCGTTGATAAAGTTTGGTTGTCATGTAGGCCGCCTTGTATTTTTGGGCAAGGGAGAAGGTGACGTTCAGCAGTCCACTCAATCAGAATTCAGAGGTGTTGGCTATTACTAAGAAATGTTGTTCACAATTTTGTCATCTGAAGGTTTGAATGACCCACTTTTCTCTGTAAATGTTGTGATTTCACTTCAAAATAGTTGCAACAAGGCATTCTGAAAAGGATCTTTTACGTGGCCTTGTGATGATTCCCTCTCCCCACACCCTTTGTTCAGTGACAAATGTTTTTGATATCTGTATGATGATTTACATGAATTTGATTGAGAGAGAATTGCAATTCAAGTTGATTTGGC CATCATTGTCCGAACTCGAATCGGGTCTACTTTCAGAAGGGTTCTATTCTAGGGTTTAAGCTTTTCGCTGAATTTCTGATTCTGTCAATCACGAAGACGATGACCTCCATGGCTGCACTGTCCAGAAGGCTCTGCCGCTCTCTGCTGTCGAATTCAAAAGCTTCTCATCACCACGACATCTTCCCCGTGACCTTTTGCAGTAACAACCTTTTCTTCCGCTCGGTCTCAGACATCAGTGACTCCAGTTTTGATTCGGACATGGACTTGGACTCGCATTCAGTAACTAATCGACCTTCTGTCTCACCGTCCTCGTCCCAGTCATCAACTCAGATGAGAACGATCTACAATCGACCACTGGAAAATGGCCTTGATGCCGGCATTTATAAGGCTATATTGGTGGGTCAGGCGGGGCAGAAGCCATTGCAGAAGCAGCTGAAGAGTGGTAGAACAGTGACGCTGTTATCAGTAGGGACGGGTGGGATTCGTAATAATCGGAGACCCTTGGCTAATGAGGAACCGAAAGAGTATGCAAATCGATGCGCAGTTCAGTGGCATCGGGTTTCGATTTATCCTCAGAGACTAGGCGATATTGTCATGAAGCACGTCGTGCCTGGTTCAATTTTGTATTTGGAGGGGAATTTGGAGACCAAAATTTTCACTGATCCAACAACTGGTCTTGTTCGACGTATTAGAGAAATTGCCATTCGTCGCAATGGCCGCCTTGTATTTTTGGGCAAGGGAGAAGGTGACGTTCAGCAGTCCACTCAATCAGAATTCAGAGGTGTTGGCTATTACTAAGAAATGTTGTTCACAATTTTGTCATCTGAAGGTTTGAATGACCCACTTTTCTCTGTAAATGTTGTGATTTCACTTCAAAATAGTTGCAACAAGGCATTCTGAAAAGGATCTTTTACGTGGCCTTGTGATGATTCCCTCTCCCCACACCCTTTGTTCAGTGACAAATGTTTTTGATATCTGTATGATGATTTACATGAATTTGATTGAGAGAGAATTGCAATTCAAGTTGATTTGGC ATGACCTCCATGGCTGCACTGTCCAGAAGGCTCTGCCGCTCTCTGCTGTCGAATTCAAAAGCTTCTCATCACCACGACATCTTCCCCGTGACCTTTTGCAGTAACAACCTTTTCTTCCGCTCGGTCTCAGACATCAGTGACTCCAGTTTTGATTCGGACATGGACTTGGACTCGCATTCAGTAACTAATCGACCTTCTGTCTCACCGTCCTCGTCCCAGTCATCAACTCAGATGAGAACGATCTACAATCGACCACTGGAAAATGGCCTTGATGCCGGCATTTATAAGGCTATATTGGTGGGTCAGGCGGGGCAGAAGCCATTGCAGAAGCAGCTGAAGAGTGGTAGAACAGTGACGCTGTTATCAGTAGGGACGGGTGGGATTCGTAATAATCGGAGACCCTTGGCTAATGAGGAACCGAAAGAGTATGCAAATCGATGCGCAGTTCAGTGGCATCGGGTTTCGATTTATCCTCAGAGACTAGGCGATATTGTCATGAAGCACGTCGTGCCTGGTTCAATTTTGTATTTGGAGGGGAATTTGGAGACCAAAATTTTCACTGATCCAACAACTGGTCTTGTTCGACGTATTAGAGAAATTGCCATTCGTCGCAATGGCCGCCTTGTATTTTTGGGCAAGGGAGAAGGTGACGTTCAGCAGTCCACTCAATCAGAATTCAGAGGTGTTGGCTATTACTAA MTSMAALSRRLCRSLLSNSKASHHHDIFPVTFCSNNLFFRSVSDISDSSFDSDMDLDSHSVTNRPSVSPSSSQSSTQMRTIYNRPLENGLDAGIYKAILVGQAGQKPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPKEYANRCAVQWHRVSIYPQRLGDIVMKHVVPGSILYLEGNLETKIFTDPTTGLVRRIREIAIRRNGRLVFLGKGEGDVQQSTQSEFRGVGYY Homology
BLAST of Tan0002505 vs. ExPASy Swiss-Prot
Match: Q84J78 (Single-stranded DNA-binding protein, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g11060 PE=2 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 4.4e-20 Identity = 58/176 (32.95%), Postives = 97/176 (55.11%), Query Frame = 0
BLAST of Tan0002505 vs. ExPASy Swiss-Prot
Match: Q8D254 (Single-stranded DNA-binding protein OS=Wigglesworthia glossinidia brevipalpis OX=36870 GN=ssb PE=3 SV=2) HSP 1 Score: 64.7 bits (156), Expect = 1.6e-09 Identity = 42/120 (35.00%), Postives = 64/120 (53.33%), Query Frame = 0
BLAST of Tan0002505 vs. ExPASy Swiss-Prot
Match: Q9XJG4 (Single-stranded DNA-binding protein OS=Escherichia phage P1 OX=10678 GN=ssb PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.7e-08 Identity = 38/129 (29.46%), Postives = 66/129 (51.16%), Query Frame = 0
BLAST of Tan0002505 vs. ExPASy Swiss-Prot
Match: Q9A894 (Single-stranded DNA-binding protein OS=Caulobacter vibrioides (strain ATCC 19089 / CB15) OX=190650 GN=ssb PE=3 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.3e-08 Identity = 43/130 (33.08%), Postives = 65/130 (50.00%), Query Frame = 0
BLAST of Tan0002505 vs. ExPASy Swiss-Prot
Match: Q8L2A6 (Single-stranded DNA-binding protein OS=Proteus vulgaris OX=585 GN=ssb PE=3 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.0e-08 Identity = 41/140 (29.29%), Postives = 70/140 (50.00%), Query Frame = 0
BLAST of Tan0002505 vs. NCBI nr
Match: XP_023519718.1 (single-stranded DNA-binding protein, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023519719.1 single-stranded DNA-binding protein, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023519720.1 single-stranded DNA-binding protein, mitochondrial-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 407.1 bits (1045), Expect = 9.9e-110 Identity = 206/232 (88.79%), Postives = 217/232 (93.53%), Query Frame = 0
BLAST of Tan0002505 vs. NCBI nr
Match: XP_023000724.1 (single-stranded DNA-binding protein, mitochondrial [Cucurbita maxima] >XP_023000725.1 single-stranded DNA-binding protein, mitochondrial [Cucurbita maxima] >XP_023000726.1 single-stranded DNA-binding protein, mitochondrial [Cucurbita maxima]) HSP 1 Score: 406.8 bits (1044), Expect = 1.3e-109 Identity = 206/232 (88.79%), Postives = 216/232 (93.10%), Query Frame = 0
BLAST of Tan0002505 vs. NCBI nr
Match: XP_038893715.1 (single-stranded DNA-binding protein, mitochondrial-like [Benincasa hispida] >XP_038893716.1 single-stranded DNA-binding protein, mitochondrial-like [Benincasa hispida] >XP_038893717.1 single-stranded DNA-binding protein, mitochondrial-like [Benincasa hispida] >XP_038893718.1 single-stranded DNA-binding protein, mitochondrial-like [Benincasa hispida]) HSP 1 Score: 406.0 bits (1042), Expect = 2.2e-109 Identity = 202/232 (87.07%), Postives = 218/232 (93.97%), Query Frame = 0
BLAST of Tan0002505 vs. NCBI nr
Match: XP_038895598.1 (single-stranded DNA-binding protein, mitochondrial-like [Benincasa hispida] >XP_038895599.1 single-stranded DNA-binding protein, mitochondrial-like [Benincasa hispida]) HSP 1 Score: 403.7 bits (1036), Expect = 1.1e-108 Identity = 203/232 (87.50%), Postives = 218/232 (93.97%), Query Frame = 0
BLAST of Tan0002505 vs. NCBI nr
Match: XP_022137580.1 (single-stranded DNA-binding protein, mitochondrial [Momordica charantia]) HSP 1 Score: 403.3 bits (1035), Expect = 1.4e-108 Identity = 203/232 (87.50%), Postives = 216/232 (93.10%), Query Frame = 0
BLAST of Tan0002505 vs. ExPASy TrEMBL
Match: A0A6J1KGM8 (single-stranded DNA-binding protein, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111495086 PE=4 SV=1) HSP 1 Score: 406.8 bits (1044), Expect = 6.3e-110 Identity = 206/232 (88.79%), Postives = 216/232 (93.10%), Query Frame = 0
BLAST of Tan0002505 vs. ExPASy TrEMBL
Match: A0A6J1C717 (single-stranded DNA-binding protein, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111008995 PE=4 SV=1) HSP 1 Score: 403.3 bits (1035), Expect = 6.9e-109 Identity = 203/232 (87.50%), Postives = 216/232 (93.10%), Query Frame = 0
BLAST of Tan0002505 vs. ExPASy TrEMBL
Match: A0A6J1E721 (single-stranded DNA-binding protein, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111431312 PE=4 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 8.5e-107 Identity = 203/232 (87.50%), Postives = 214/232 (92.24%), Query Frame = 0
BLAST of Tan0002505 vs. ExPASy TrEMBL
Match: A0A0A0LTL6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042140 PE=4 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 1.6e-105 Identity = 198/234 (84.62%), Postives = 216/234 (92.31%), Query Frame = 0
BLAST of Tan0002505 vs. ExPASy TrEMBL
Match: A0A1S3C3D2 (single-stranded DNA-binding protein, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103495996 PE=4 SV=1) HSP 1 Score: 383.3 bits (983), Expect = 7.4e-103 Identity = 193/234 (82.48%), Postives = 212/234 (90.60%), Query Frame = 0
BLAST of Tan0002505 vs. TAIR 10
Match: AT3G18580.1 (Nucleic acid-binding, OB-fold-like protein ) HSP 1 Score: 271.6 bits (693), Expect = 6.0e-73 Identity = 147/230 (63.91%), Postives = 177/230 (76.96%), Query Frame = 0
BLAST of Tan0002505 vs. TAIR 10
Match: AT4G11060.1 (mitochondrially targeted single-stranded DNA binding protein ) HSP 1 Score: 99.8 bits (247), Expect = 3.1e-21 Identity = 58/176 (32.95%), Postives = 97/176 (55.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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