Tan0002455 (gene) Snake gourd v1

Overview


Name	Tan0002455
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Gag/pol protein
Location	LG11: 22221185 .. 22223755 (+)
RNA-Seq Expression	Tan0002455
Synteny	Tan0002455

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCCTTGATAATAGCCTTACTCAAAAGTGAATGTTTAACTGGCGAGAATTATACTACGTGGAAGTCCAACCTGAATATGATTCTGGTTGTTGACGAACTTCGATTTGTACTAACTGAGAAATGTCCTCAGGTCCCTGCTCGAAGCGCTTCTCAATCTGTTAAGGATGCGTACGACCGTTGGATCAAGGCCAATGACAAGGCCAAGGTTTACATTTTGGCTAGTCTTTCTGAAGTTCTGGCCAAAAAGCACAAGGGCATGGTCTCAGCTCGTGAGATCATGAGTCCGTTGCAGAATATATTTGGACAACTGTCTGGACAGCTGCGACACGAATCCCTCAAGTACGTTTATAACTCCCGTATGAAGGAGGGATCGTCGGTGAAAGAACATGTTCTCGATCTGATGGTCCACTTCAACGTGGAAGATATGAACGGCGCGGTCATCGACAAGCAAAGTCAGGTGTCCTTCATCCTGGAATCTCTTTAGAAGAGTTTCCTGCAATTCTTCAGCAATGCGGTGATGAATAACATAGAGTACAACCTGACTACTCTCCTCAATGAACTACAGACTTTCCAGTCTCTTATGAAGAATAAGTGACAGGCTGATGGAGAGGCAAATTTGTTTGTCCATTCGACAAGGTTCCGAAGGTTCATCCTGCAGGACTAAGTCTCATGGTCCATCTTACGGCTTAAGAAGACCCAAAAGAAGAAGATAGGAGGGAAAGGGAAGGCACCTGCCGCTGCAGACAAAGGCAAGGGAAAACCCAAAGTTGCAGACAAAGGAAAATGTTTCCACTGCAATGTGGACGGGCACTGGAAGCGAAACGACCCAAAATACCTTGTTGAGCTCAAAGAGAAGAAAGGTAAATTCGATTTACTTGTTCTTCAAACTTCTTTAGTGAAAAGTGATGACTTTACCTGGATACTTGATTCAGGGACCACTTACCACGTTTGCTCTTATTTTCAGGAAACTAGTTCCCTCAAGGAGCTCGAATAGGGTGTGATGACGCTCAGGGTCGGAACGGGAGACGTCTCAGCTCGTGCAGTGGGAGATGCCAAGCTGTTTTTTAGAGATAGATTTTTATTTTTAGAAAATCTGTACATAGTTCCTAAGATTAAGAGGAACTTGATATCTATCTCTTGTCTAATTCAACATGGTTATTGTATTACCTTTTCCATTAATGAAGTGTTCATTTCAAAGAAAGGTGTCAATATTTGTTCTGCTAAGTTAGAAAGCAGCTTATATGTACATAAACCAAATCAAACTAAAGCAATTTTAAATCATGAGATGTTTAACACTGCAAATACTCAAAGTAAAAGGCAAAGAATTTCTCCAAATAATAATACCTATCTTTGGCATGTTAGTCTTGGTCATATAAATCTCAACCGGATTGAGAGATTATCTAAGAATGGACTTCTAAATAAGTTAGAAGATGATTCTTTACCTCCTTGTGAATCATGCTTGGAAGGTAAAATGACTAAGCAACCTTTTACTGGAAAAGGTTATAGAGCCAAAAAACCCTTAGAACTTATACATTCGGATCTCTGTGGTCCGGTGAATGTTAAAGCTCGAGTAGAGTACGAATATTTCATCTCTTTCATAGATGTTTATTCGAGGTATGGTTATCTATACCTAATGCATCATATGTCTGAAGCTCTTAAAAAGTTCAAAGAGTATAAGACTGAAGTAGAGAATGCATTAGGAAAAACCATAAAGACACTTCGATCCGATCGAGGTGGAGAGTATAAGGATCTAAGATTCCAGGACTATTTGATAGAACATGGAATCCAATCTCAACTCGCACAACCTAATACACCTCAGCAGAATGGTGTATCTTAAAGGAAAAATAGAACCTTGTTAGACATGGTTCGATCTATGATGAGCTATGCTCAATTGCTTGCCTCATTTTCGGGTTACGCAGTAGAGACTGCGGTTCAAATCTTGAACAATGTTCCATCAAAAAGTGTTTCAGAAACACCTTTTGAGTTATGGAAGGGGCGTAAACCTAGTTTACAACACTTTAGAATTTGGGGTTTTCCAGCACACATGCTATGGACAAACCCAAAGAAATTAGAACCTCGTTCAAGATTATGCCAATTTGTTGGCTATCCCAAAGAAACGAGAGGTTGTCTTTTCTATGACCCACAAGAAAACAAGGTGCTTGTATTGACAAACACCACTTTCTTGGAGGAAGATAACATGAGAAACCTTAAACCGCGTAGTAAGTTACTATTAAATGAAGCTACAGATGAGTCAACAAGAGTTGTTGATTAAGCTGGACCTTCATCAAGAGTTGATGAAGAAGTTGGCACATCGAGTCAGTCTCGTCCTTCTCAATTGTGGGGAATGCCTCGACGCAGTGGGAGGGTTGTTTCCCAACCTGACCGCTACTTGGGTTTAACTGAAACTCAAGTTGTCATACTTTTTGACGGTGTAGAGGATCCATTGTCTTATAAACAGGCAATGAATGACGTAGATAAACACCAATGGATCAAAGTCATGGACCTTGAAATGGAGTCAATGTACTTCAATTCAGTTTGGGAACTTGTAGACCAGCCTGAAGGGTAA

mRNA sequence

ATGTCGTCCTTGATAATAGCCTTACTCAAAAGTGAATGTTTAACTGGCGAGAATTATACTACGTGGAAGTCCAACCTGAATATGATTCTGGTTGTTGACGAACTTCGATTTGTACTAACTGAGAAATGTCCTCAGGTCCCTGCTCGAAGCGCTTCTCAATCTGTTAAGGATGCGTACGACCGTTGGATCAAGGCCAATGACAAGGCCAAGGTTTACATTTTGGCTAGTCTTTCTGAAGTTCTGGCCAAAAAGCACAAGGGCATGGTCTCAGCTCGTGAGATCATGAGTCCGTTGCAGAATATATTTGGACAACTGTCTGGACAGCTGCGACACGAATCCCTCAAGTACGTTTATAACTCCCGTATGAAGGAGGGATCGTCGGTGAAAGAACATGTTCTCGATCTGATGGTCCACTTCAACGTGGAAGATATGAACGGCGCGGTCATCGACAAGCAAAGTCAGAAGACCCAAAAGAAGAAGATAGGAGGGAAAGGGAAGGCACCTGCCGCTGCAGACAAAGGCAAGGGAAAACCCAAAGTTGCAGACAAAGGAAAATGTTTCCACTGCAATGTGGACGGGCACTGGAAGCGAAACGACCCAAAATACCTTGTTGAGCTCAAAGAGAAGAAAGGTAAAATGACTAAGCAACCTTTTACTGGAAAAGGTTATAGAGCCAAAAAACCCTTAGAACTTATACATTCGGATCTCTGTGGTCCGGTGAATGTTAAAGCTCGAGTAGAGTACGAATATTTCATCTCTTTCATAGATGTTTATTCGAGGTATGGTTATCTATACCTAATGCATCATATGTCTGAAGCTCTTAAAAAGTTCAAAGAGTATAAGACTGAAGTAGAGAATGCATTAGGAAAAACCATAAAGACACTTCGATCCGATCGAGGTGGAGAGTATAAGGATCTAAGATTCCAGGACTATTTGATAGAACATGGAATCCAATCTCAACTCGCACAACCTAATACACCTCAGCAGAATGCACACATGCTATGGACAAACCCAAAGAAATTAGAACCTCGTTCAAGATTATGCCAATTTGTTGGCTATCCCAAAGAAACGAGAGGTTGTCTTTTCTATGACCCACAAGAAAACAAGGTGCTTGTATTGACAAACACCACTTTCTTGGAGGAAGATAACATGAGAAACCTTAAACCGCGTACTGGACCTTCATCAAGAGTTGATGAAGAAGTTGGCACATCGAGTCAGTCTCGTCCTTCTCAATTGTGGGGAATGCCTCGACGCAGTGGGAGGGTTGTTTCCCAACCTGACCGCTACTTGGGTTTAACTGAAACTCAAGTTGTCATACTTTTTGACGGTGTAGAGGATCCATTGTCTTATAAACAGGCAATGAATGACGTAGATAAACACCAATGGATCAAAGTCATGGACCTTGAAATGGAGTCAATGTACTTCAATTCAGTTTGGGAACTTGTAGACCAGCCTGAAGGGTAA

Coding sequence (CDS)

ATGTCGTCCTTGATAATAGCCTTACTCAAAAGTGAATGTTTAACTGGCGAGAATTATACTACGTGGAAGTCCAACCTGAATATGATTCTGGTTGTTGACGAACTTCGATTTGTACTAACTGAGAAATGTCCTCAGGTCCCTGCTCGAAGCGCTTCTCAATCTGTTAAGGATGCGTACGACCGTTGGATCAAGGCCAATGACAAGGCCAAGGTTTACATTTTGGCTAGTCTTTCTGAAGTTCTGGCCAAAAAGCACAAGGGCATGGTCTCAGCTCGTGAGATCATGAGTCCGTTGCAGAATATATTTGGACAACTGTCTGGACAGCTGCGACACGAATCCCTCAAGTACGTTTATAACTCCCGTATGAAGGAGGGATCGTCGGTGAAAGAACATGTTCTCGATCTGATGGTCCACTTCAACGTGGAAGATATGAACGGCGCGGTCATCGACAAGCAAAGTCAGAAGACCCAAAAGAAGAAGATAGGAGGGAAAGGGAAGGCACCTGCCGCTGCAGACAAAGGCAAGGGAAAACCCAAAGTTGCAGACAAAGGAAAATGTTTCCACTGCAATGTGGACGGGCACTGGAAGCGAAACGACCCAAAATACCTTGTTGAGCTCAAAGAGAAGAAAGGTAAAATGACTAAGCAACCTTTTACTGGAAAAGGTTATAGAGCCAAAAAACCCTTAGAACTTATACATTCGGATCTCTGTGGTCCGGTGAATGTTAAAGCTCGAGTAGAGTACGAATATTTCATCTCTTTCATAGATGTTTATTCGAGGTATGGTTATCTATACCTAATGCATCATATGTCTGAAGCTCTTAAAAAGTTCAAAGAGTATAAGACTGAAGTAGAGAATGCATTAGGAAAAACCATAAAGACACTTCGATCCGATCGAGGTGGAGAGTATAAGGATCTAAGATTCCAGGACTATTTGATAGAACATGGAATCCAATCTCAACTCGCACAACCTAATACACCTCAGCAGAATGCACACATGCTATGGACAAACCCAAAGAAATTAGAACCTCGTTCAAGATTATGCCAATTTGTTGGCTATCCCAAAGAAACGAGAGGTTGTCTTTTCTATGACCCACAAGAAAACAAGGTGCTTGTATTGACAAACACCACTTTCTTGGAGGAAGATAACATGAGAAACCTTAAACCGCGTACTGGACCTTCATCAAGAGTTGATGAAGAAGTTGGCACATCGAGTCAGTCTCGTCCTTCTCAATTGTGGGGAATGCCTCGACGCAGTGGGAGGGTTGTTTCCCAACCTGACCGCTACTTGGGTTTAACTGAAACTCAAGTTGTCATACTTTTTGACGGTGTAGAGGATCCATTGTCTTATAAACAGGCAATGAATGACGTAGATAAACACCAATGGATCAAAGTCATGGACCTTGAAATGGAGTCAATGTACTTCAATTCAGTTTGGGAACTTGTAGACCAGCCTGAAGGGTAA

Protein sequence

MSSLIIALLKSECLTGENYTTWKSNLNMILVVDELRFVLTEKCPQVPARSASQSVKDAYDRWIKANDKAKVYILASLSEVLAKKHKGMVSAREIMSPLQNIFGQLSGQLRHESLKYVYNSRMKEGSSVKEHVLDLMVHFNVEDMNGAVIDKQSQKTQKKKIGGKGKAPAAADKGKGKPKVADKGKCFHCNVDGHWKRNDPKYLVELKEKKGKMTKQPFTGKGYRAKKPLELIHSDLCGPVNVKARVEYEYFISFIDVYSRYGYLYLMHHMSEALKKFKEYKTEVENALGKTIKTLRSDRGGEYKDLRFQDYLIEHGIQSQLAQPNTPQQNAHMLWTNPKKLEPRSRLCQFVGYPKETRGCLFYDPQENKVLVLTNTTFLEEDNMRNLKPRTGPSSRVDEEVGTSSQSRPSQLWGMPRRSGRVVSQPDRYLGLTETQVVILFDGVEDPLSYKQAMNDVDKHQWIKVMDLEMESMYFNSVWELVDQPEG

Homology

[Close]

BLAST of Tan0002455 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 9.6e-17
Identity = 47/149 (31.54%), Postives = 77/149 (51.68%), Query Frame = 0


Query: 211 GKMTKQPFTGKGYRAKKPLELIHSDLCGPVNVKARVEYEYFISFIDVYSRYGYLYLMHHM 270
           GK  +  F     R    L+L++SD+CGP+ +++    +YF++FID  SR  ++Y++   
Sbjct: 463 GKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTK 522

Query: 271 SEALKKFKEYKTEVENALGKTIKTLRSDRGGEYKDLRFQDYLIEHGIQSQLAQPNTPQQN 330
            +  + F+++   VE   G+ +K LRSD GGEY    F++Y   HGI+ +   P TPQ N
Sbjct: 523 DQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHN 582

Query: 331 AHMLWTNPKKLEPRSRLCQFVGYPKETRG 360
                 N   +E    + +    PK   G
Sbjct: 583 GVAERMNRTIVEKVRSMLRMAKLPKSFWG 611

[Close]

BLAST of Tan0002455 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.4e-12
Identity = 45/119 (37.82%), Postives = 66/119 (55.46%), Query Frame = 0


Query: 212 KMTKQPFTGKGYRAKKPLELIHSDLCGPVNVKARVEYEYFISFIDVYSRYGYLYLMHHMS 271
           K  K PF+     + KPLE I+SD+     + +   Y Y++ F+D ++RY +LY +   S
Sbjct: 486 KSHKVPFSNSTITSSKPLEYIYSDVWSS-PILSIDNYRYYVIFVDHFTRYTWLYPLKQKS 545

Query: 272 EALKKFKEYKTEVENALGKTIKTLRSDRGGEYKDLRFQDYLIEHGIQSQLAQPNTPQQN 331
           +    F  +K+ VEN     I TL SD GGE+  LR  DYL +HGI    + P+TP+ N
Sbjct: 546 QVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLR--DYLSQHGISHFTSPPHTPEHN 601

[Close]

BLAST of Tan0002455 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.0e-10
Identity = 38/119 (31.93%), Postives = 63/119 (52.94%), Query Frame = 0


Query: 212 KMTKQPFTGKGYRAKKPLELIHSDLCGPVNVKARVEYEYFISFIDVYSRYGYLYLMHHMS 271
           K  K PF+     + +PLE I+SD+     + +   Y Y++ F+D ++RY +LY +   S
Sbjct: 507 KSNKVPFSQSTINSTRPLEYIYSDVWSS-PILSHDNYRYYVIFVDHFTRYTWLYPLKQKS 566

Query: 272 EALKKFKEYKTEVENALGKTIKTLRSDRGGEYKDLRFQDYLIEHGIQSQLAQPNTPQQN 331
           +  + F  +K  +EN     I T  SD GGE+  +   +Y  +HGI    + P+TP+ N
Sbjct: 567 QVKETFITFKNLLENRFQTRIGTFYSDNGGEF--VALWEYFSQHGISHLTSPPHTPEHN 622

[Close]

BLAST of Tan0002455 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 69.3 bits (168), Expect = 1.3e-10
Identity = 36/122 (29.51%), Postives = 61/122 (50.00%), Query Frame = 0


Query: 211 GKMTKQPFTGKGYRA--KKPLELIHSDLCGPVNVKARVEYEYFISFIDVYSRYGYLYLMH 270
           GK  + PF     +   K+PL ++HSD+CGP+      +  YF+ F+D ++ Y   YL+ 
Sbjct: 461 GKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIK 520

Query: 271 HMSEALKKFKEYKTEVENALGKTIKTLRSDRGGEYKDLRFQDYLIEHGIQSQLAQPNTPQ 330
           + S+    F+++  + E      +  L  D G EY     + + ++ GI   L  P+TPQ
Sbjct: 521 YKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQ 580

[Close]

BLAST of Tan0002455 vs. ExPASy Swiss-Prot
Match: Q12491 (Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-B PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.7e-05
Identity = 37/129 (28.68%), Postives = 57/129 (44.19%), Query Frame = 0


Query: 211 GKMTKQPFTGKGYRAK-----KPLELIHSDLCGPVNVKARVEYEYFISFIDVYSRYGYLY 270
           GK TK     KG R K     +P + +H+D+ GPV+   +    YFISF D  +R+ ++Y
Sbjct: 639 GKSTKHRHV-KGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVY 698

Query: 271 LMHHMSE--ALKKFKEYKTEVENALGKTIKTLRSDRGGEYKDLRFQDYLIEHGIQSQLAQ 330
            +H   E   L  F      ++N     +  ++ DRG EY +     +    GI +    
Sbjct: 699 PLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITA--CY 758

Query: 331 PNTPQQNAH 333
             T    AH
Sbjct: 759 TTTADSRAH 764

[Close]

BLAST of Tan0002455 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 580.5 bits (1495), Expect = 1.4e-161
Identity = 345/653 (52.83%), Postives = 388/653 (59.42%), Query Frame = 0


Query: 1   MSSLIIALLKSECLTGENYTTWKSNLNMILVVDELRFVLTEKCPQVPARSASQSVKDAYD 60
           MSS IIALLK + LTGENY TWKS LNMILV+ +L FVL E+CP  P + ASQSV+DAYD
Sbjct: 1   MSSSIIALLKKDQLTGENYATWKSKLNMILVIVDLSFVLMEECPPFPTKHASQSVRDAYD 60

Query: 61  RWIKANDKAKVYILASLSEVLAKKHKGMVSAREIMSPLQNIFGQLSGQLRHESLKYVYNS 120
           RW KANDKA+++ILAS+S++L+KKH+ MV+AR+IM  L+ +FGQ S Q++ E+   V +S
Sbjct: 61  RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEA--NVAHS 120

Query: 121 RMKEGSSVKEHVLDLMVHFNVEDMNGAVIDKQSQKTQKKKIGGKGKAPAAADKGKGKPKV 180
           + +   S                         S+K QK+K  GKGK P  A + KGK KV
Sbjct: 121 KRRFVPS----------------------PSGSEKIQKRK-EGKGKGPTIAVEDKGKAKV 180

Query: 181 ADKGKCFHCNVDGHWKRNDPKYLVELKEK------------------------------- 240
           A K KCFHCNVD HWK N PKYLV+ KEK                               
Sbjct: 181 AIKRKCFHCNVDEHWKTNCPKYLVKKKEKEGATNHVCSSLQETSSFKQLEDSEMTLKVGT 240

Query: 241 ----------------------------------------------KGKMTKQPFTGKGY 300
                                                         +GKMTK+PFTGKGY
Sbjct: 241 GDVISARAVGDAKLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGY 300

Query: 301 RAKKPLELIHSDLCGPVNVKARVEYEYFISFIDVYSRYGYLYLMHHMSEALKKFKEYKTE 360
           RAK+PLELIHSDLCGP+NVKAR  +EYFISFID YSRYGYLYLM H SEAL+KFKEYKTE
Sbjct: 301 RAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTE 360

Query: 361 VENALGKTIKTLRSDRGGEYKDLRFQDYLIEHGIQSQLAQPNTPQQN------------- 420
           VEN L K IK LRSDRGGEY DLRFQDY+IEHGIQSQL+ P TPQQN             
Sbjct: 361 VENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDM 420

Query: 421 ----------------------------------------------------------AH 480
                                                                     AH
Sbjct: 421 VRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH 480

Query: 481 MLWTNPKKLEPRSRLCQFVGYPKETRGCLFYDPQENKVLVLTNTTFLEEDNMRNLKPRT- 488
           +L TNPKKLEPRSRLCQFVGYPKETRG LF+DPQEN+V V TN TFLEED+MRN KPR+ 
Sbjct: 481 VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSK 540

[Close]

BLAST of Tan0002455 vs. NCBI nr
Match: TYK02840.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 580.5 bits (1495), Expect = 1.4e-161
Identity = 345/653 (52.83%), Postives = 388/653 (59.42%), Query Frame = 0


Query: 1   MSSLIIALLKSECLTGENYTTWKSNLNMILVVDELRFVLTEKCPQVPARSASQSVKDAYD 60
           MSS IIALLK + LTGENY TWKS LNMILV+ +L FVL E+CP  P + ASQSV+DAYD
Sbjct: 1   MSSSIIALLKKDQLTGENYATWKSKLNMILVIVDLSFVLMEECPPFPTKHASQSVRDAYD 60

Query: 61  RWIKANDKAKVYILASLSEVLAKKHKGMVSAREIMSPLQNIFGQLSGQLRHESLKYVYNS 120
           RW KANDKA+++ILAS+S++L+KKH+ MV+AR+IM  L+ +FGQ S Q++ E+   V +S
Sbjct: 61  RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEA--NVAHS 120

Query: 121 RMKEGSSVKEHVLDLMVHFNVEDMNGAVIDKQSQKTQKKKIGGKGKAPAAADKGKGKPKV 180
           + +   S                         S+K QK+K  GKGK P  A + KGK KV
Sbjct: 121 KRRFVPS----------------------PSGSEKIQKRK-EGKGKGPTIAVEDKGKAKV 180

Query: 181 ADKGKCFHCNVDGHWKRNDPKYLVELKEK------------------------------- 240
           A K KCFHCNVD HWK N PKYLV+ KEK                               
Sbjct: 181 AIKRKCFHCNVDEHWKTNCPKYLVKKKEKEGATNHVCSSLQETSSFKQLEDSEMTLKVGT 240

Query: 241 ----------------------------------------------KGKMTKQPFTGKGY 300
                                                         +GKMTK+PFTGKGY
Sbjct: 241 GDVISARAVGDAKLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGY 300

Query: 301 RAKKPLELIHSDLCGPVNVKARVEYEYFISFIDVYSRYGYLYLMHHMSEALKKFKEYKTE 360
           RAK+PLELIHSDLCGP+NVKAR  +EYFISFID YSRYGYLYLM H SEAL+KFKEYKTE
Sbjct: 301 RAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTE 360

Query: 361 VENALGKTIKTLRSDRGGEYKDLRFQDYLIEHGIQSQLAQPNTPQQN------------- 420
           VEN L K IK LRSDRGGEY DLRFQDY+IEHGIQSQL+ P TPQQN             
Sbjct: 361 VENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDM 420

Query: 421 ----------------------------------------------------------AH 480
                                                                     AH
Sbjct: 421 VRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAH 480

Query: 481 MLWTNPKKLEPRSRLCQFVGYPKETRGCLFYDPQENKVLVLTNTTFLEEDNMRNLKPRT- 488
           +L TNPKKLEPRSRLCQFVGYPKETRG LF+DPQEN+V V TN TFLEED+MRN KPR+ 
Sbjct: 481 VLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSK 540

[Close]

BLAST of Tan0002455 vs. NCBI nr
Match: KAA0025159.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 564.7 bits (1454), Expect = 7.8e-157
Identity = 332/605 (54.88%), Postives = 377/605 (62.31%), Query Frame = 0


Query: 1   MSSLIIALLKSECLTGENYTTWKSNLNMILVVDELRFVLTEKCPQVPARSASQSVKDAYD 60
           MSS IIALLK + LTGENY TWKS LNMILV+ +L FVL E+CP  P + ASQSV+D YD
Sbjct: 1   MSSSIIALLKKDQLTGENYATWKSKLNMILVIADLSFVLMEECPPFPTKYASQSVRDTYD 60

Query: 61  RWIKANDKAKVYILASLSEVLAKKHKGMVSAREIMSPLQNIFGQLSGQLRHESLKYVYNS 120
           RW KANDKA+++ILAS+S++L+KKH+ MV+AR+IM  L+ +FGQ S Q++ E+   V++ 
Sbjct: 61  RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEA-NVVHSK 120

Query: 121 RMKEGSSVKEHVLDLMVHFNVEDMNGAVIDKQSQKTQKKKIGGKGKAPAAADKGKGKPKV 180
           R    SS                         S+K QK+K  GK K P  A + KGK KV
Sbjct: 121 RRFVPSS-----------------------SGSEKIQKRK-EGKEKGPTIAVEDKGKAKV 180

Query: 181 ADKGKCFHCNVDGHWKRNDPKYLVELKEK------------------------------- 240
           A K K FHCNVD HWK N PKYLV+ KE                                
Sbjct: 181 AIKRKYFHCNVDEHWKTNCPKYLVKKKENEETSSFKQLEESEMTLKVGTGDVISARAVGD 240

Query: 241 -----------------------------------KGKMTKQPFTGKGYRAKKPLELIHS 300
                                              +GKMTK+PFT KGYRAK+PLELIHS
Sbjct: 241 AKLGHINLDRIGRLVKNGLLNKLKDDSLPPCESCLEGKMTKRPFTEKGYRAKEPLELIHS 300

Query: 301 DLCGPVNVKARVEYEYFISFIDVYSRYGYLYLMHHMSEALKKFKEYKTEVENALGKTIKT 360
           DLCG +NVKAR  +EYFISFID YSRYGYLYLM H SEAL+KFKEYKTEVEN L K IK 
Sbjct: 301 DLCGLMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 360

Query: 361 LRSDRGGEYKDLRFQDYLIEHGIQSQLAQP---------NTPQQN--------------- 420
           LRSDRGGEY DLRFQDY+IEHGIQSQL+ P         N P ++               
Sbjct: 361 LRSDRGGEYMDLRFQDYMIEHGIQSQLSTPVETAVHILNNAPSKSVSETPFELWRGRKPS 420

Query: 421 ----------AHMLWTNPKKLEPRSRLCQFVGYPKETRGCLFYDPQENKVLVLTNTTFLE 480
                      H+L TNPKKL+ RSRLCQFVGYPKETRG LF+DPQEN+V V TN TFLE
Sbjct: 421 LSHFRIWGCPTHVLVTNPKKLKSRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLE 480

Query: 481 EDNMRNLKPRT------------------GPSSRVDEEVGTSSQSRPSQLWGMPRRSGRV 488
           ED+MRN KPR+                  GPSSRVDE   TS QS PSQ   MPRRSGRV
Sbjct: 481 EDHMRNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDETT-TSGQSHPSQSLRMPRRSGRV 540

[Close]

BLAST of Tan0002455 vs. NCBI nr
Match: TYJ97618.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 562.0 bits (1447), Expect = 5.0e-156
Identity = 318/646 (49.23%), Postives = 395/646 (61.15%), Query Frame = 0


Query: 1   MSSLIIALLKSECLTGENYTTWKSNLNMILVVDELRFVLTEKCPQVPARSASQSVKDAYD 60
           M++  + +L ++ L G NY +WK+ +N++L++D+L+FVL E+CPQVPA +A+Q+V++ Y+
Sbjct: 1   MTTATLNMLAADKLNGNNYASWKNTINIVLIIDDLKFVLVEECPQVPAANATQTVREPYE 60

Query: 61  RWIKANDKAKVYILASLSEVLAKKHKGMVSAREIMSPLQNIFGQLSGQLRHESLKYVYNS 120
           RW K N+K + YILASLSEVLAKKH+ M++AREIM  LQ +FGQ S Q+ H++LKY+YN+
Sbjct: 61  RWAKGNEKGRAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQINHDALKYIYNA 120

Query: 121 RMKEGSSVKEHVLDLMVHFNVEDMNGAVIDKQSQ-------------------------- 180
           RM EG+SV+EHVL++MVHFNV +MNGAVID+ SQ                          
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQGQKGEANVATSTRKFHRGSTSGTKSM 180

Query: 181 ------KTQKKKIGGKG-KAPAAADKGKGKPKVADKGKCFHCNVDGHWKRNDPKYLVELK 240
                 K  KKK GG+G KA  AA K   K K A KG CFH N +GHWKRN PKYL E K
Sbjct: 181 PSSSGNKKWKKKKGGQGNKANLAAAKTTKKSK-ATKGICFHYNQEGHWKRNCPKYLAEKK 240

Query: 241 EKK----------------------------------GKMTKQPFTGKGYRAKKPLELIH 300
           + K                                  GKMTK+PFTGKG+RAK+PLEL+H
Sbjct: 241 KAKQGHINLNRIERLVKNGILSELEENSLPICESCLEGKMTKRPFTGKGHRAKEPLELVH 300

Query: 301 SDLCGPVNVKARVEYEYFISFIDVYSRYGYLYLMHHMSEALKKFKEYKTEVENALGKTIK 360
           SDLCGP+NVKAR E+EYFI+F D YSRYGY+YLM H SEAL+KFKEYK EVENAL KTIK
Sbjct: 301 SDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIK 360

Query: 361 TLRSDRGGEYKDLRFQDYLIEHGIQSQLAQPNTPQQN----------------------- 420
           T RSDRGGEY DL+FQ+YL+E  I SQL+ P TPQQN                       
Sbjct: 361 TFRSDRGGEYMDLKFQNYLMECEILSQLSAPGTPQQNGVSERRNRTLLDMVRSMISYAHL 420

Query: 421 ------------------------------------------------AHMLWTNPKKLE 480
                                                           AH+L  NPKKLE
Sbjct: 421 PNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLE 480

Query: 481 PRSRLCQFVGYPKETRGCLFYDPQENKVLVLTNTTFLEEDNMRNLKPR------------ 488
           PRS+LC FVGYPK TRG  FYDP++NKV V TN TFLEED++R  KPR            
Sbjct: 481 PRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKET 540

[Close]

BLAST of Tan0002455 vs. NCBI nr
Match: KAA0060254.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 558.5 bits (1438), Expect = 5.6e-155
Identity = 317/646 (49.07%), Postives = 395/646 (61.15%), Query Frame = 0


Query: 1   MSSLIIALLKSECLTGENYTTWKSNLNMILVVDELRFVLTEKCPQVPARSASQSVKDAYD 60
           M++  + +L ++ L G NY +WK+ +N++L++D+L+FVL E+CPQVPA +A+Q+V++ Y+
Sbjct: 1   MTTATLNMLAADKLNGNNYASWKNTINIVLIIDDLKFVLVEECPQVPAANATQTVREPYE 60

Query: 61  RWIKANDKAKVYILASLSEVLAKKHKGMVSAREIMSPLQNIFGQLSGQLRHESLKYVYNS 120
           RW K N+K + YILASLSEVLAKKH+ M++AREIM  LQ +FGQ S Q+ H++LKY+YN+
Sbjct: 61  RWAKGNEKGRAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQINHDALKYIYNA 120

Query: 121 RMKEGSSVKEHVLDLMVHFNVEDMNGAVIDKQSQ-------------------------- 180
           RM EG+SV+EHVL++MVHFNV +MNGAVID+ SQ                          
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQGQKGEANVATSTRKFHRGSTSGTKSM 180

Query: 181 ------KTQKKKIGGKG-KAPAAADKGKGKPKVADKGKCFHCNVDGHWKRNDPKYLVELK 240
                 K  KKK GG+G KA  AA K   K K A KG CFH N +GHWKRN PKYL E K
Sbjct: 181 PSSSGNKKWKKKKGGQGNKANLAAAKTTKKSK-ATKGICFHYNQEGHWKRNCPKYLAEKK 240

Query: 241 EKK----------------------------------GKMTKQPFTGKGYRAKKPLELIH 300
           + K                                  GKMTK+PFTGKG+RAK+PLEL+H
Sbjct: 241 KAKQGHINLNRIERLVKNGILSELEENSLPICESCLEGKMTKRPFTGKGHRAKEPLELVH 300

Query: 301 SDLCGPVNVKARVEYEYFISFIDVYSRYGYLYLMHHMSEALKKFKEYKTEVENALGKTIK 360
           SDLCGP+NVKAR E+EYFI+F D YSRYGY+YLM H SEAL+KFKEYK EVENAL KTIK
Sbjct: 301 SDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIK 360

Query: 361 TLRSDRGGEYKDLRFQDYLIEHGIQSQLAQPNTPQQN----------------------- 420
           T RSDRGGEY DL+FQ+YL+E  I SQL+ P TPQQN                       
Sbjct: 361 TFRSDRGGEYMDLKFQNYLMECEILSQLSAPGTPQQNGVSERRNRTLLDMVRSMISYAHL 420

Query: 421 ------------------------------------------------AHMLWTNPKKLE 480
                                                           AH+L  NPKKLE
Sbjct: 421 PNSFWGYAVQTAVYILNYVPSKSVYETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLE 480

Query: 481 PRSRLCQFVGYPKETRGCLFYDPQENKVLVLTNTTFLEEDNMRNLKPR------------ 488
           PRS+LC FVGYPK TRG  FYD ++NKV VLTN TFLE+D++R  KPR            
Sbjct: 481 PRSKLCLFVGYPKGTRGGYFYDLKDNKVFVLTNATFLEKDHIREHKPRSKIVLNKLSKEI 540

[Close]

BLAST of Tan0002455 vs. ExPASy TrEMBL
Match: A0A5A7SIN2 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2405G00060 PE=4 SV=1)

HSP 1 Score: 564.7 bits (1454), Expect = 3.8e-157
Identity = 332/605 (54.88%), Postives = 377/605 (62.31%), Query Frame = 0


Query: 1   MSSLIIALLKSECLTGENYTTWKSNLNMILVVDELRFVLTEKCPQVPARSASQSVKDAYD 60
           MSS IIALLK + LTGENY TWKS LNMILV+ +L FVL E+CP  P + ASQSV+D YD
Sbjct: 1   MSSSIIALLKKDQLTGENYATWKSKLNMILVIADLSFVLMEECPPFPTKYASQSVRDTYD 60

Query: 61  RWIKANDKAKVYILASLSEVLAKKHKGMVSAREIMSPLQNIFGQLSGQLRHESLKYVYNS 120
           RW KANDKA+++ILAS+S++L+KKH+ MV+AR+IM  L+ +FGQ S Q++ E+   V++ 
Sbjct: 61  RWTKANDKARLHILASMSDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEA-NVVHSK 120

Query: 121 RMKEGSSVKEHVLDLMVHFNVEDMNGAVIDKQSQKTQKKKIGGKGKAPAAADKGKGKPKV 180
           R    SS                         S+K QK+K  GK K P  A + KGK KV
Sbjct: 121 RRFVPSS-----------------------SGSEKIQKRK-EGKEKGPTIAVEDKGKAKV 180

Query: 181 ADKGKCFHCNVDGHWKRNDPKYLVELKEK------------------------------- 240
           A K K FHCNVD HWK N PKYLV+ KE                                
Sbjct: 181 AIKRKYFHCNVDEHWKTNCPKYLVKKKENEETSSFKQLEESEMTLKVGTGDVISARAVGD 240

Query: 241 -----------------------------------KGKMTKQPFTGKGYRAKKPLELIHS 300
                                              +GKMTK+PFT KGYRAK+PLELIHS
Sbjct: 241 AKLGHINLDRIGRLVKNGLLNKLKDDSLPPCESCLEGKMTKRPFTEKGYRAKEPLELIHS 300

Query: 301 DLCGPVNVKARVEYEYFISFIDVYSRYGYLYLMHHMSEALKKFKEYKTEVENALGKTIKT 360
           DLCG +NVKAR  +EYFISFID YSRYGYLYLM H SEAL+KFKEYKTEVEN L K IK 
Sbjct: 301 DLCGLMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKI 360

Query: 361 LRSDRGGEYKDLRFQDYLIEHGIQSQLAQP---------NTPQQN--------------- 420
           LRSDRGGEY DLRFQDY+IEHGIQSQL+ P         N P ++               
Sbjct: 361 LRSDRGGEYMDLRFQDYMIEHGIQSQLSTPVETAVHILNNAPSKSVSETPFELWRGRKPS 420

Query: 421 ----------AHMLWTNPKKLEPRSRLCQFVGYPKETRGCLFYDPQENKVLVLTNTTFLE 480
                      H+L TNPKKL+ RSRLCQFVGYPKETRG LF+DPQEN+V V TN TFLE
Sbjct: 421 LSHFRIWGCPTHVLVTNPKKLKSRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLE 480

Query: 481 EDNMRNLKPRT------------------GPSSRVDEEVGTSSQSRPSQLWGMPRRSGRV 488
           ED+MRN KPR+                  GPSSRVDE   TS QS PSQ   MPRRSGRV
Sbjct: 481 EDHMRNHKPRSKLVLSEATDKSTRVVDEVGPSSRVDETT-TSGQSHPSQSLRMPRRSGRV 540

[Close]

BLAST of Tan0002455 vs. ExPASy TrEMBL
Match: A0A5D3BHG7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold639G00150 PE=4 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 2.4e-156
Identity = 318/646 (49.23%), Postives = 395/646 (61.15%), Query Frame = 0


Query: 1   MSSLIIALLKSECLTGENYTTWKSNLNMILVVDELRFVLTEKCPQVPARSASQSVKDAYD 60
           M++  + +L ++ L G NY +WK+ +N++L++D+L+FVL E+CPQVPA +A+Q+V++ Y+
Sbjct: 1   MTTATLNMLAADKLNGNNYASWKNTINIVLIIDDLKFVLVEECPQVPAANATQTVREPYE 60

Query: 61  RWIKANDKAKVYILASLSEVLAKKHKGMVSAREIMSPLQNIFGQLSGQLRHESLKYVYNS 120
           RW K N+K + YILASLSEVLAKKH+ M++AREIM  LQ +FGQ S Q+ H++LKY+YN+
Sbjct: 61  RWAKGNEKGRAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQINHDALKYIYNA 120

Query: 121 RMKEGSSVKEHVLDLMVHFNVEDMNGAVIDKQSQ-------------------------- 180
           RM EG+SV+EHVL++MVHFNV +MNGAVID+ SQ                          
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQGQKGEANVATSTRKFHRGSTSGTKSM 180

Query: 181 ------KTQKKKIGGKG-KAPAAADKGKGKPKVADKGKCFHCNVDGHWKRNDPKYLVELK 240
                 K  KKK GG+G KA  AA K   K K A KG CFH N +GHWKRN PKYL E K
Sbjct: 181 PSSSGNKKWKKKKGGQGNKANLAAAKTTKKSK-ATKGICFHYNQEGHWKRNCPKYLAEKK 240

Query: 241 EKK----------------------------------GKMTKQPFTGKGYRAKKPLELIH 300
           + K                                  GKMTK+PFTGKG+RAK+PLEL+H
Sbjct: 241 KAKQGHINLNRIERLVKNGILSELEENSLPICESCLEGKMTKRPFTGKGHRAKEPLELVH 300

Query: 301 SDLCGPVNVKARVEYEYFISFIDVYSRYGYLYLMHHMSEALKKFKEYKTEVENALGKTIK 360
           SDLCGP+NVKAR E+EYFI+F D YSRYGY+YLM H SEAL+KFKEYK EVENAL KTIK
Sbjct: 301 SDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIK 360

Query: 361 TLRSDRGGEYKDLRFQDYLIEHGIQSQLAQPNTPQQN----------------------- 420
           T RSDRGGEY DL+FQ+YL+E  I SQL+ P TPQQN                       
Sbjct: 361 TFRSDRGGEYMDLKFQNYLMECEILSQLSAPGTPQQNGVSERRNRTLLDMVRSMISYAHL 420

Query: 421 ------------------------------------------------AHMLWTNPKKLE 480
                                                           AH+L  NPKKLE
Sbjct: 421 PNSFWGYAVQTAVYILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLE 480

Query: 481 PRSRLCQFVGYPKETRGCLFYDPQENKVLVLTNTTFLEEDNMRNLKPR------------ 488
           PRS+LC FVGYPK TRG  FYDP++NKV V TN TFLEED++R  KPR            
Sbjct: 481 PRSKLCLFVGYPKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKET 540

[Close]

BLAST of Tan0002455 vs. ExPASy TrEMBL
Match: A0A5A7UYX7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00180 PE=4 SV=1)

HSP 1 Score: 558.5 bits (1438), Expect = 2.7e-155
Identity = 317/646 (49.07%), Postives = 395/646 (61.15%), Query Frame = 0


Query: 1   MSSLIIALLKSECLTGENYTTWKSNLNMILVVDELRFVLTEKCPQVPARSASQSVKDAYD 60
           M++  + +L ++ L G NY +WK+ +N++L++D+L+FVL E+CPQVPA +A+Q+V++ Y+
Sbjct: 1   MTTATLNMLAADKLNGNNYASWKNTINIVLIIDDLKFVLVEECPQVPAANATQTVREPYE 60

Query: 61  RWIKANDKAKVYILASLSEVLAKKHKGMVSAREIMSPLQNIFGQLSGQLRHESLKYVYNS 120
           RW K N+K + YILASLSEVLAKKH+ M++AREIM  LQ +FGQ S Q+ H++LKY+YN+
Sbjct: 61  RWAKGNEKGRAYILASLSEVLAKKHESMLTAREIMDSLQEMFGQASYQINHDALKYIYNA 120

Query: 121 RMKEGSSVKEHVLDLMVHFNVEDMNGAVIDKQSQ-------------------------- 180
           RM EG+SV+EHVL++MVHFNV +MNGAVID+ SQ                          
Sbjct: 121 RMNEGASVREHVLNMMVHFNVAEMNGAVIDEASQGQKGEANVATSTRKFHRGSTSGTKSM 180

Query: 181 ------KTQKKKIGGKG-KAPAAADKGKGKPKVADKGKCFHCNVDGHWKRNDPKYLVELK 240
                 K  KKK GG+G KA  AA K   K K A KG CFH N +GHWKRN PKYL E K
Sbjct: 181 PSSSGNKKWKKKKGGQGNKANLAAAKTTKKSK-ATKGICFHYNQEGHWKRNCPKYLAEKK 240

Query: 241 EKK----------------------------------GKMTKQPFTGKGYRAKKPLELIH 300
           + K                                  GKMTK+PFTGKG+RAK+PLEL+H
Sbjct: 241 KAKQGHINLNRIERLVKNGILSELEENSLPICESCLEGKMTKRPFTGKGHRAKEPLELVH 300

Query: 301 SDLCGPVNVKARVEYEYFISFIDVYSRYGYLYLMHHMSEALKKFKEYKTEVENALGKTIK 360
           SDLCGP+NVKAR E+EYFI+F D YSRYGY+YLM H SEAL+KFKEYK EVENAL KTIK
Sbjct: 301 SDLCGPMNVKARGEFEYFITFTDDYSRYGYVYLMQHKSEALEKFKEYKAEVENALSKTIK 360

Query: 361 TLRSDRGGEYKDLRFQDYLIEHGIQSQLAQPNTPQQN----------------------- 420
           T RSDRGGEY DL+FQ+YL+E  I SQL+ P TPQQN                       
Sbjct: 361 TFRSDRGGEYMDLKFQNYLMECEILSQLSAPGTPQQNGVSERRNRTLLDMVRSMISYAHL 420

Query: 421 ------------------------------------------------AHMLWTNPKKLE 480
                                                           AH+L  NPKKLE
Sbjct: 421 PNSFWGYAVQTAVYILNYVPSKSVYETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLE 480

Query: 481 PRSRLCQFVGYPKETRGCLFYDPQENKVLVLTNTTFLEEDNMRNLKPR------------ 488
           PRS+LC FVGYPK TRG  FYD ++NKV VLTN TFLE+D++R  KPR            
Sbjct: 481 PRSKLCLFVGYPKGTRGGYFYDLKDNKVFVLTNATFLEKDHIREHKPRSKIVLNKLSKEI 540

[Close]

BLAST of Tan0002455 vs. ExPASy TrEMBL
Match: A0A5A7VJG3 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001110 PE=4 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 2.9e-149
Identity = 331/702 (47.15%), Postives = 374/702 (53.28%), Query Frame = 0


Query: 1   MSSLIIALLKSECLTGENYTTWKSNLNMILVVDELRFVLTEKCPQVPARSASQSVKDAYD 60
           MS  IIALLK + LTGENY TWKS LNMILV+ +LRFVL E+CP  P + ASQSV+DAYD
Sbjct: 1   MSCSIIALLKKDQLTGENYATWKSKLNMILVIADLRFVLMEECPPFPTKYASQSVRDAYD 60

Query: 61  RWIKANDKAKVYILASLSEVLAKKHKGMVSAREIMSPLQNIFGQLSGQLRHESLKYVYNS 120
            W KANDKA ++ILAS+S++L+KKH+ MV+AR+IM  L+ +FGQ S Q++ E+    ++ 
Sbjct: 61  CWTKANDKAHLHILASISDILSKKHEIMVTARQIMDSLREMFGQPSIQIKQEA-NVAHSK 120

Query: 121 RMKEGSSVKEHVLDLMVHFNVEDMNGAVIDKQSQKTQKKKIGGKGKAPAAADKGKGKPKV 180
           R    SS                         S+K QK+K  GKG+ P  A +GKGK KV
Sbjct: 121 RFAPSSS------------------------GSEKIQKRK-EGKGRGPTIAVEGKGKAKV 180

Query: 181 ADKGKCFHCNVDGHWKRNDPKYLVELKEK------------------------------- 240
             KGKCFHCNVD HWK N PKYLV+ KEK                               
Sbjct: 181 VIKGKCFHCNVDEHWKTNCPKYLVKKKEKEGATNHVCSSLQETSSFKQLEESEMTLMVGT 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 GDVISARAVGDVKLFFGIKFMFLENLYIVPKIKRNLVFVSCLIEHMYSINFSMNEAFISK 300

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 301 NGAKLEDNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLDHINLDRIG 360

Query: 361 -----------------------KGKMTKQPFTGKGYRAKKPLELIHSDLCGPVNVKARV 420
                                  +GKMTK+PFTGK YRAK+PLELIHSDLCGP+NVKAR 
Sbjct: 361 RLVKNGLLNKLKDDSLPPCESCLEGKMTKRPFTGKDYRAKEPLELIHSDLCGPMNVKARG 420

Query: 421 EYEYFISFIDVYSRYGYLYLMHHMSEALKKFKEYKTEVENALGKTIKTLRSDRGGEYKDL 480
            +EYFISFID YSRYGYLYLM H  EAL+KFKEYKTEVEN L K IK LRSDRGGEY DL
Sbjct: 421 GFEYFISFIDDYSRYGYLYLMEHKYEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDL 480

Query: 481 RFQDYLIEHGIQSQLAQPNTPQQNA-----------------------HMLWTNPKKLEP 488
           RFQDY+IEHGIQSQL+ P TPQQN                           W  PKKLEP
Sbjct: 481 RFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGTPKKLEP 540

[Close]

BLAST of Tan0002455 vs. ExPASy TrEMBL
Match: A0A5D3DZX8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold381G00320 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 8.4e-149
Identity = 315/592 (53.21%), Postives = 358/592 (60.47%), Query Frame = 0


Query: 28  MILVVDELRFVLTEKCPQVPARSASQSVKDAYDRWIKANDKAKVYILASLSEVLAKKHKG 87
           MILV+ +LRFVL EKCP  P +  SQSV+DAY RW KANDKA ++ILAS+S++L+KKH+ 
Sbjct: 1   MILVIGDLRFVLMEKCPPFPTKYESQSVRDAYGRWTKANDKAHLHILASMSDILSKKHEI 60

Query: 88  MVSAREIMSPLQNIFGQLSGQLRHESLKYVYNSRMKEGSSVKEHVLDLMVHFNVEDMNGA 147
           MV AR+IM  L+ +FGQ S Q++ E+    ++ R    SS                    
Sbjct: 61  MVIARQIMDSLREMFGQPSIQIKQEA-NVTHSRRFSPSSS-------------------- 120

Query: 148 VIDKQSQKTQKKKIGGKGKAPAAADKGKGKPKVADKGKCFHCNVDGHWKRNDPKYLVELK 207
                S+K QK+K  GKGK P  A + KGK KV  KGKCFHC+VD HWK N PKYLV+ K
Sbjct: 121 ----GSEKIQKRK-EGKGKGPTIAVEDKGKTKVVIKGKCFHCDVDEHWKTNCPKYLVKKK 180

Query: 208 EK---------------------------------------------------------- 267
           EK                                                          
Sbjct: 181 EKEGATNHVCSSLQETSSFKQLEDSEMTLKVGTGDVISARAVGDAKLGHINLNQIGRLIK 240

Query: 268 -------------------KGKMTKQPFTGKGYRAKKPLELIHSDLCGPVNVKARVEYEY 327
                              +GKMTK+PFT KGYRAK+PLELIHSDLCGP+NVKAR  +EY
Sbjct: 241 NGLLNKLEDDSLPSCESCHEGKMTKRPFTEKGYRAKEPLELIHSDLCGPMNVKARGGFEY 300

Query: 328 FISFIDVYSRYGYLYLMHHMSEALKKFKEYKTEVENALGKTIKTLRSDRGGEYKDLRFQD 387
           FISFID YSRYGYLYLM H SEAL+KFKEYK EVEN L K IK LRSD+GGEY DLRFQD
Sbjct: 301 FISFIDDYSRYGYLYLMEHKSEALEKFKEYKAEVENLLSKKIKILRSDQGGEYMDLRFQD 360

Query: 388 YLIEHGIQSQLAQPNTPQQN-------------------------------------AHM 447
           Y+IEHGIQSQL+ P TPQQN                                     +H+
Sbjct: 361 YMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDKVRSMMSYTQLPSSFWGDCSSYLEQSHV 420

Query: 448 LWTNPKKLEPRSRLCQFVGYPKETRGCLFYDPQENKVLVLTNTTFLEEDNMRNLKPRT-- 488
           L TNPKKL PRSRLCQFVGYPKETRG L +DPQEN+VLV TN TFLEED+ R+ KPR+  
Sbjct: 421 LVTNPKKLGPRSRLCQFVGYPKETRGGLLFDPQENRVLVSTNATFLEEDHTRDHKPRSKL 480

The following BLAST results are available for this feature:

BLAST of Tan0002455 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	9.6e-17	31.54	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q9ZT94	1.4e-12	37.82	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	1.0e-10	31.93	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P04146	1.3e-10	29.51	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q12491	1.7e-05	28.68	Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Tan0002455 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0059226.1	1.4e-161	52.83	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK02840.1	1.4e-161	52.83	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0025159.1	7.8e-157	54.88	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYJ97618.1	5.0e-156	49.23	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0060254.1	5.6e-155	49.07	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Tan0002455 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SIN2	3.8e-157	54.88	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2405G000...	[more]
A0A5D3BHG7	2.4e-156	49.23	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold639G0015...	[more]
A0A5A7UYX7	2.7e-155	49.07	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00180...	[more]
A0A5A7VJG3	2.9e-149	47.15	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G0011...	[more]
A0A5D3DZX8	8.4e-149	53.21	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold381G0032...	[more]

BLAST of Tan0002455 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 270..290
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 385..418
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 397..413
None	No IPR available	PANTHER	PTHR35317:SF8	POLYPROTEIN-LIKE PROTEIN	coord: 18..156
None	No IPR available	PANTHER	PTHR35317	OS04G0629600 PROTEIN	coord: 18..156
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 226..327 e-value: 1.1E-10 score: 41.7
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 224..331 score: 14.104942
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 221..335 e-value: 8.3E-20 score: 73.0
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 223..333

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0002455.1	Tan0002455.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding