Tan0002404 (gene) Snake gourd v1

Overview


Name	Tan0002404
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	F-box protein
Location	LG10: 4356396 .. 4359015 (+)
RNA-Seq Expression	Tan0002404
Synteny	Tan0002404

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCAATTGCCGGAGGATTGCATCTGTAGCATTCTGGCCTTCACGTCGCAGAAGGATGTCTGCAGATCGGCGGCGGTCTCGTCGACGTTCCGATCAGCCGCCGATTTCGACGCTCTGTGGAACACTTTTCTGCCGGCGGATTACCGGCAGATTTTTTCTCAGGCTTCGCCTTCTTCGTCGCCTTTGCTTCTGAATTCCTTGTCCAAGAAGGCTCTCTACTTCTATCTCTGCGATCATCCGATTCTCACGGGCATTGGAAAATCGGTAATTTTAACATTCTCTGTGTTTGGATTTTTTTTAAAAAAATAATTTAATTTAATTTTTTTAAGATTTGCTCTAGAGTTAGATTATGGAGGAGTGATCCATAAAAAATAACTTTAAAATTACTTTTAGCATCAGTAGAATTATTTTTAAGAAGATGTTACCAAATACACAAAGGTTTTTATTAGAACAAACTTTTGAATATTAACCTCACAAAATCAATTCTACTAGATTTAATACCTCGTTGAATTTGACCTACTTTATAATTTATAATTTAGAGACATTGAAGAAATTATTATCTTTTCTTAAAATACTTTTTTTATAAAAGTGGTTATTGTTAAAATCTGTGTTAGTTACATTTTCTTAAAAGTACTTGATTGCGATTCAAATAAAAACCACTCTTTGGAATTATTAAATTGGTTCGAAATAAATTTTCAAAAGATGATTCTGGGTTGGAATATTGTGCCAAATCCACCACAATTTTTTTTTAATAGTTTGGACCAGTTAAAAGTAGATTAAATTACAAGCTTAATTCTAAATCTTTTATATTTGTCCAATAGATCCCTTAATTTTAAAAAGTATAAGTATATTCTCAAACTTTCAATTTTGTGTCTATTAATTTCCTTAACTTTAAAAATATCAAATAGGTCATCAAACTTTTAATTTGTATCTAATAAGTCCTTTGATGTATTCAATTTTTTTTTAAAAAAATCAATGAATCTATTAGACATAAAATTAAAATTTGTGTAAATATATTAAATTTTCAATTTCGTGTCTAATACATTTATGAATTTTGAAAAATATCAAATAGATCAAGGATTTATTAGATACAAAATTTAAAGTTGGATGACTTAAAAAATATATAATCGAAAGTTTATAAATTTATTAGACATTAACTTGTTAGTTATAAAATCAAAAGTTTAAACACATTATAAACCTTTTTAAAATTTAGGACTTATCTAATACAAACAAAAAAAAACTTTGACACTAAATTCATAATTTAACTATTAAAAATATGAGTACGAAGTTATATTGATGAAATTATAATTGATTTATTGAATTAGAGTTCTGTATTATTGGAGAAAGAGAGCGGGAAAATGTGTTATGTGATTGGAGCAAAAGACCTCCACATCCGGACAGATCTCATTACTTCAGTGCCACGTCGGAAATGGAAATATGGCCCTCAATCGAGGTGTGCTAATAATTTAATTATCTTTTCTATTTCCAATTGCATTATTTCATATCTATTTTCTCTTTTATCATGCATTTATATAATTTTTAGTTTAAATTACTATTTTAGTCTCTAAACTTTGATAAGTATCAAATATATCCATGAACTTTTAATTTTGTATTTAATAAGTCTCTGATAATTGTTTATTTAATAGGTCCCTAAGATTTAAAAATATCTAATAAGTCGAATTTTTAATTTTGTATCTAATAAGTCCCTAACATATTCAAAATTTTTGAAAATTAACTGATTATTACATATGAAATTGAATTTTATGTCTAATAGGACTCAATTTTATTTCTAGTAAGTTCATTATTTTTTTTTTAAATTATAAACTAAGTCAATAACATATTAGACACAAAATTGAAAATTCAAAAACCTTTTGAACACAAAATTAAAATTTTAAAGATTCATCAGACACATTTAAAAATTTAGAGACCAAATAAATACAAATTTAAAAATTCAATAATTTATTAGATACTTTTTCAAGTACCAAATATACACAAATCTGAAAATTCATAGACTAAACTTGTAATTTAATTTGATTTTTAAAATGTTTAATTTTCTTTTAACTACAGGTCTTCTGAAATGGCTTTGGCGTCCTATGATAAATGGGGTGATATAATTAAAATTTATGGGAGGATGGATAGCCCAAAGTTAAGTCCCAAAACTAATTATGCAGTTTACCTTATTTTCATTATAGTAGGATGTAGACACCAACCTCTTCGTGAGAGATTGGTTGAATTAAGTTTGTTTGATGAAGCGGTCGAGTTTGATGAAGCAAAACTTTTGCCATTCGATGAAAAAGCCATTAAAGTTCCTCGCAAAAGAGGGGATGGATGGATGGAAATTGAAATGGGCCAAATCTTTAACGAATTCGGAGAGTTTCGCCCAATTACTTCAAGTATAATGAAAGTTGCCCTTGACAATTGTGCCAAATGTGGGTTAGTTATTGAGGGAATTGAGATAAGAGCCATGTCACAATCAAAAGGAAAGTAGAAACCATCCAACTTTATCAAAGATAGAATGGTTTAACGGGTATCTCAACGTTTGTGGTTCAAATTTTTCAATTTTATTGTACTAAAAAAGAAATGAAATACAATGCAACTTTCTATTTTATGAGCTAAT

mRNA sequence

ATGGATCAATTGCCGGAGGATTGCATCTGTAGCATTCTGGCCTTCACGTCGCAGAAGGATGTCTGCAGATCGGCGGCGGTCTCGTCGACGTTCCGATCAGCCGCCGATTTCGACGCTCTGTGGAACACTTTTCTGCCGGCGGATTACCGGCAGATTTTTTCTCAGGCTTCGCCTTCTTCGTCGCCTTTGCTTCTGAATTCCTTGTCCAAGAAGGCTCTCTACTTCTATCTCTGCGATCATCCGATTCTCACGGGCATTGGAAAATCGAGTTCTGTATTATTGGAGAAAGAGAGCGGGAAAATGTGTTATGTGATTGGAGCAAAAGACCTCCACATCCGGACAGATCTCATTACTTCAGTGCCACGTCGGAAATGGAAATATGGCCCTCAATCGAGGTCTTCTGAAATGGCTTTGGCGTCCTATGATAAATGGGGTGATATAATTAAAATTTATGGGAGGATGGATAGCCCAAAGTTAAGTCCCAAAACTAATTATGCAGTTTACCTTATTTTCATTATAGTAGGATGTAGACACCAACCTCTTCGTGAGAGATTGGTTGAATTAAGTTTGTTTGATGAAGCGGTCGAGTTTGATGAAGCAAAACTTTTGCCATTCGATGAAAAAGCCATTAAAGTTCCTCGCAAAAGAGGGGATGGATGGATGGAAATTGAAATGGGCCAAATCTTTAACGAATTCGGAGAGTTTCGCCCAATTACTTCAAGTATAATGAAAGTTGCCCTTGACAATTGTGCCAAATGTGGGTTAGTTATTGAGGGAATTGAGATAAGAGCCATGTCACAATCAAAAGGAAAGTAGAAACCATCCAACTTTATCAAAGATAGAATGGTTTAACGGGTATCTCAACGTTTGTGGTTCAAATTTTTCAATTTTATTGTACTAAAAAAGAAATGAAATACAATGCAACTTTCTATTTTATGAGCTAAT

Coding sequence (CDS)

ATGGATCAATTGCCGGAGGATTGCATCTGTAGCATTCTGGCCTTCACGTCGCAGAAGGATGTCTGCAGATCGGCGGCGGTCTCGTCGACGTTCCGATCAGCCGCCGATTTCGACGCTCTGTGGAACACTTTTCTGCCGGCGGATTACCGGCAGATTTTTTCTCAGGCTTCGCCTTCTTCGTCGCCTTTGCTTCTGAATTCCTTGTCCAAGAAGGCTCTCTACTTCTATCTCTGCGATCATCCGATTCTCACGGGCATTGGAAAATCGAGTTCTGTATTATTGGAGAAAGAGAGCGGGAAAATGTGTTATGTGATTGGAGCAAAAGACCTCCACATCCGGACAGATCTCATTACTTCAGTGCCACGTCGGAAATGGAAATATGGCCCTCAATCGAGGTCTTCTGAAATGGCTTTGGCGTCCTATGATAAATGGGGTGATATAATTAAAATTTATGGGAGGATGGATAGCCCAAAGTTAAGTCCCAAAACTAATTATGCAGTTTACCTTATTTTCATTATAGTAGGATGTAGACACCAACCTCTTCGTGAGAGATTGGTTGAATTAAGTTTGTTTGATGAAGCGGTCGAGTTTGATGAAGCAAAACTTTTGCCATTCGATGAAAAAGCCATTAAAGTTCCTCGCAAAAGAGGGGATGGATGGATGGAAATTGAAATGGGCCAAATCTTTAACGAATTCGGAGAGTTTCGCCCAATTACTTCAAGTATAATGAAAGTTGCCCTTGACAATTGTGCCAAATGTGGGTTAGTTATTGAGGGAATTGAGATAAGAGCCATGTCACAATCAAAAGGAAAGTAG

Protein sequence

MDQLPEDCICSILAFTSQKDVCRSAAVSSTFRSAADFDALWNTFLPADYRQIFSQASPSSSPLLLNSLSKKALYFYLCDHPILTGIGKSSSVLLEKESGKMCYVIGAKDLHIRTDLITSVPRRKWKYGPQSRSSEMALASYDKWGDIIKIYGRMDSPKLSPKTNYAVYLIFIIVGCRHQPLRERLVELSLFDEAVEFDEAKLLPFDEKAIKVPRKRGDGWMEIEMGQIFNEFGEFRPITSSIMKVALDNCAKCGLVIEGIEIRAMSQSKGK

Homology

[Close]

BLAST of Tan0002404 vs. ExPASy Swiss-Prot
Match: Q9ZVR0 (Putative F-box protein PP2-B6 OS=Arabidopsis thaliana OX=3702 GN=PP2B6 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.1e-33
Identity = 100/278 (35.97%), Postives = 149/278 (53.60%), Query Frame = 0


Query: 2   DQLPEDCICSILAFTSQKDVCRSAAVSSTFRSAADFDALWNTFLPADYRQIFSQASPSSS 61
           D LPEDCI +I++FTS +DVC SA+VS +F  A   D++W  FLP++Y  +       S 
Sbjct: 46  DDLPEDCISNIISFTSPRDVCVSASVSKSFAHAVQCDSIWEKFLPSEYESLIPPWRVFS- 105

Query: 62  PLLLNSLSKKALYFYLCDHPILTGIGKSSSVLLEKESGKMCYVIGAKDLHIRTDLITSVP 121
                  SKK LYF LC  P+L   GK  S  LE  SGK C ++ AK+L I         
Sbjct: 106 -------SKKDLYFTLCYDPVLVEDGK-KSFWLETASGKKCVLLAAKELWI----TGGNN 165

Query: 122 RRKWKYGPQSRSSEMALASYDKWGDII-----KIYGRMDSPKLSPKTNYAVYLIFIIVGC 181
              W++       E+  +S++K  +++     ++ G M +  LS  T+Y+VY+++ I   
Sbjct: 166 PEYWQW------IELCESSFEKVPELLNNRSFQMGGSMSTQILSLGTHYSVYIVYKIKDE 225

Query: 182 RHQPLRERLVELSLFDEAVE-------FDEA--KLLPFDEKAIKVPRKRGDGWMEIEMGQ 241
           RH  LR+  +++ +  +  E       FDE+  K   + +K +   +KRGDGWME E+G 
Sbjct: 226 RH-GLRDLPIQVGVGFKGQEMPKQFICFDESTDKTKEWPKKKLMKSKKRGDGWMEAEIGD 285

Query: 242 IFNEFG--EFRPITSSIMKVALDNCAKCGLVIEGIEIR 264
            FN+ G   F  +  SI+ V   N  KCG++IEGIE R
Sbjct: 286 FFNDGGLMGFDEVEVSIVDVTSPN-LKCGVMIEGIEFR 302

[Close]

BLAST of Tan0002404 vs. ExPASy Swiss-Prot
Match: Q9ZVQ8 (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 5.3e-33
Identity = 100/281 (35.59%), Postives = 141/281 (50.18%), Query Frame = 0


Query: 1   MDQLPEDCICSILAFTSQKDVCRSAAVSSTFRSAADFDALWNTFLPADYRQIFSQASPSS 60
           +D LPE+C+  I++FTS +D C  A+VS TF SA   D +W  F+P +Y  + SQ+    
Sbjct: 36  LDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSR--- 95

Query: 61  SPLLLNSLSKKALYFYLCDHPILTGIGKSSSVLLEKESGKMCYVIGAKDLHIRTDLITSV 120
                  LSKK LYF LCD  +L   GK  S+ +EK + K C +I A +L I      S 
Sbjct: 96  ---AFKFLSKKELYFALCDKSVLIDDGK-KSLWIEKANAKRCIMISAMNLAIAWG--NSP 155

Query: 121 PRRKWKYGPQSRSSEMALASYDKWGDIIKIYGRMDSPKLSPKTNYAVYLIF--------- 180
              +W   PQ+R   +A         + +I GR++S  +SPKT Y+ Y+++         
Sbjct: 156 QSWRWIPDPQARFETVAELLE---VCLFEIRGRINSRVISPKTRYSAYIVYKKLNICYGF 215

Query: 181 ------IIVGCRHQPLRERLVELSLFDEAVEFDEAKLLPFDEKAIKVPRKRGDGWMEIEM 240
                 ++VG   Q L E       FDE +  DE        K +  P +R DGWMEI++
Sbjct: 216 ENVAVEVVVGVVGQDLEESCRRYICFDETM--DEQFRRRDRGKNLVKPERRKDGWMEIKI 275

Query: 241 GQIFNEFGEFRPITSSIMKVALD---NCAKCGLVIEGIEIR 264
           G+ FNE G        I  VAL+      K GL+I+GIEIR
Sbjct: 276 GEFFNEGGLLN--DDEIEMVALEAKQRHWKRGLIIQGIEIR 300

[Close]

BLAST of Tan0002404 vs. ExPASy Swiss-Prot
Match: Q9ZVR5 (Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2)

HSP 1 Score: 142.5 bits (358), Expect = 7.0e-33
Identity = 95/272 (34.93%), Postives = 148/272 (54.41%), Query Frame = 0


Query: 2   DQLPEDCICSILAFTSQKDVCRSAAVSSTFRSAADFDALWNTFLPADYRQIFSQASPSSS 61
           D LPEDCI +I++FTS +D C +A+VS TF SA + D++W+ FLP+DY  +   +   S 
Sbjct: 48  DNLPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDYSSLVPPSRVFS- 107

Query: 62  PLLLNSLSKKALYFYLCDHPILTGIGKSSSVLLEKESGKMCYVIGAKDLHIRTDLITSVP 121
                  SKK LYF +CD+P+L   G   S  LEKE+GK C+++  K   +    +++  
Sbjct: 108 -------SKKELYFAICDNPVLVEDG-GKSFWLEKENGKKCFMLSPKK-SMWITWVSTPQ 167

Query: 122 RRKWKYGPQSRSSEMALASYDKWGDIIKIYGRMDSPKLSPKTNYAVYLIFIIV-GCRHQP 181
             +W   P++R  E+       W    ++ G M++ +LSP T Y+ Y++F    GC +  
Sbjct: 168 YWRWISIPEARFEEVPELLNVCW---FEVRGGMNTKELSPGTRYSAYIVFKTKNGCPN-- 227

Query: 182 LRERLVELSLFDEAVEFDEAKLL---PFDEKA------IKVPRKRGDGWMEIEMGQIFNE 241
           L +  VE ++     E  +  +    P D++       +  P KR DGWME E+GQ FNE
Sbjct: 228 LGDVPVEATVGLVGQESSQRHIYFVGPSDQRRDRETRDVTRPTKRKDGWMEAELGQFFNE 287

Query: 242 FGEFRPITSSIMKVALDNCAKCGLVIEGIEIR 264
            G    + +SI+++      K GL+I+GIE R
Sbjct: 288 SG-CDVVDTSILEIKTPYW-KRGLIIQGIEFR 302

[Close]

BLAST of Tan0002404 vs. ExPASy Swiss-Prot
Match: Q9ZVQ6 (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.6e-32
Identity = 100/280 (35.71%), Postives = 140/280 (50.00%), Query Frame = 0


Query: 2   DQLPEDCICSILAFTSQKDVCRSAAVSSTFRSAADFDALWNTFLPADYRQIFSQASPSSS 61
           D  PEDCI  I++FT+ +D C +A VS TF S    D +W  FLPADY  +   +   S 
Sbjct: 15  DSFPEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLIPPSRVFS- 74

Query: 62  PLLLNSLSKKALYFYLCDHPILTGIGKSSSVLLEKESGKMCYVIGAKDLHIRTDLITSVP 121
                  SKK LYF LC+ P+L    K  SV LEK SGK C ++ A +L I   +    P
Sbjct: 75  -------SKKELYFSLCNDPVLFDDDK-KSVWLEKASGKRCLMLSAMNLSI---IWGDNP 134

Query: 122 RR-KWKYGPQSRSSEMALASYDKWGDIIKIYGRMDSPKLSPKTNYAVYLIF--------- 181
           +  +W   P+SR  ++A      W    +I GR ++  LSP+T Y+ Y++F         
Sbjct: 135 QYWQWIPIPESRFEKVAKLRDVCW---FEIRGRTNTRVLSPRTRYSAYIVFKGVDKCYGF 194

Query: 182 ------IIVGCRHQPLRERLVELSLFDEAVEFDEAKLLPFDEKAIKVPRKRGDGWMEIEM 241
                   VG   Q    RL+    F EA+      ++         P++R DGWMEIE+
Sbjct: 195 QNVAIEAAVGVVGQEPSRRLI---CFSEAIRRGRRNVVK--------PKQREDGWMEIEL 254

Query: 242 GQIFNEFG--EFRPITSSIMKVALDNCAKCGLVIEGIEIR 264
           G+ FN+ G  +   I  S ++    N  KCGL+I+GIEIR
Sbjct: 255 GEFFNDGGIMDNDEIEMSALETKQLN-RKCGLIIQGIEIR 267

[Close]

BLAST of Tan0002404 vs. ExPASy Swiss-Prot
Match: Q3E6P4 (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.5e-31
Identity = 97/275 (35.27%), Postives = 143/275 (52.00%), Query Frame = 0


Query: 2   DQLPEDCICSILAFTSQKDVCRSAAVSSTFRSAADFDALWNTFLPADYRQIFSQASPSSS 61
           D LPEDCI +I++FTS +D C +A+VS TF SA   D +W+ FLP +Y  + S++   + 
Sbjct: 62  DVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSRVFA- 121

Query: 62  PLLLNSLSKKALYFYLCDHPILTGIGKSSSVLLEKESGKMCYVIGAKDLHIRTDLITSVP 121
                  SKK LYF LC +P+L   GK  S  LEK SGK C ++ +K+L I     +S  
Sbjct: 122 -------SKKELYFALCHNPVLIEDGK-KSFWLEKASGKRCIMLSSKELWITWG--SSPE 181

Query: 122 RRKWKYGPQSRSSEMALASYDKWGDIIKIYGRMDSPKLSPKTNYAVYLIF----IIVGCR 181
             +W   P+SR +++A      W    +I G+  +  LSP T Y+ Y++F       G  
Sbjct: 182 YWQWISIPESRFNKIAELLDVCW---FEIRGKTSARVLSPGTRYSAYIVFKTKDRCPGLG 241

Query: 182 HQPLRERLVELSLFDEAVEFDEAKLL---PFDEKA------IKVPRKRGDGWMEIEMGQI 241
           H P     VE+ L     E  +  +    P D +       +  P +R DGWME E+G+ 
Sbjct: 242 HLP-----VEVGLGLVGQESSKRFIYFIGPRDRRGRRETRDVTKPDQREDGWMEAELGEF 301

Query: 242 FNEFGEFRPITSSIMKVALDNCAKCGLVIEGIEIR 264
           FNE      I  S++++   +  K GL+I+GIE R
Sbjct: 302 FNE-ERCDEIEFSVIEIKSPSW-KSGLIIQGIEFR 315

[Close]

BLAST of Tan0002404 vs. NCBI nr
Match: KAG6582459.1 (putative F-box protein PP2-B12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 241.1 bits (614), Expect = 1.1e-59
Identity = 141/267 (52.81%), Postives = 173/267 (64.79%), Query Frame = 0


Query: 1   MDQLPEDCICSILAFTSQKDVCRSAAVSSTFRSAADFDALWNTFLPADYRQIFSQASPSS 60
           ++QLP +CI +ILAFTS KD CRSA VS  FRSAAD +ALW TFLP+DYRQI SQAS  S
Sbjct: 3   INQLPVECIATILAFTSPKDACRSATVSPAFRSAADSEALWTTFLPSDYRQIISQASSPS 62

Query: 61  SPLLLNSLSKKALYFYLCDHPILTGIGKSSSVLLEKESGKMCYVIGAKDLHIRTDLITSV 120
           +   LNSLSKKALYF+LCDH +L G G SS V LEKESGK CY+IGA+DL I      S 
Sbjct: 63  TTSFLNSLSKKALYFHLCDHQLLIGSGNSSFV-LEKESGKKCYMIGARDLEIIWG--NST 122

Query: 121 PRRKWKYGPQSRSSEMALASYDKWGDIIKIYGRMDSPKLSPKTNYAVYLIFIIVGCRHQ- 180
               W   P SR SE+A      W   ++I GR+++  LSP+TNYA YL+F +V  R+Q 
Sbjct: 123 QYWTWNPNPISRFSEVAELQMVWW---LEIKGRIEARNLSPQTNYAAYLVFKLVEDRYQR 182

Query: 181 -PLRERLVELSLFDEAVEFDEAKLLPFD--EKAIKVPRKRGDGWMEIEMGQIFNEFGEFR 240
              RER V L ++ E  E +E K    D  E ++    +R DGWMEIEMG+IFNE G+  
Sbjct: 183 RGFRERPVLLRVYFEGAEVEEGKTAILDPREGSLVAFEERADGWMEIEMGEIFNELGDDG 242

Query: 241 PITSSIMKVALDNCAKCGLVIEGIEIR 264
            I    +K   D   K GL++EGIEIR
Sbjct: 243 SIIFH-LKEFHDFITKSGLIVEGIEIR 262

[Close]

BLAST of Tan0002404 vs. NCBI nr
Match: XP_022924695.1 (putative F-box protein PP2-B12 [Cucurbita moschata])

HSP 1 Score: 239.2 bits (609), Expect = 4.2e-59
Identity = 140/267 (52.43%), Postives = 173/267 (64.79%), Query Frame = 0


Query: 1   MDQLPEDCICSILAFTSQKDVCRSAAVSSTFRSAADFDALWNTFLPADYRQIFSQASPSS 60
           ++QLP +CI +ILAFTS KD CRSA VS  FRSAAD +ALW TFLP+DYRQI SQAS  S
Sbjct: 3   INQLPVECIAAILAFTSPKDACRSATVSPAFRSAADSEALWTTFLPSDYRQIISQASSPS 62

Query: 61  SPLLLNSLSKKALYFYLCDHPILTGIGKSSSVLLEKESGKMCYVIGAKDLHIRTDLITSV 120
           +   LNSLSKKALYF+LCDH +L G G SS V LEKESGK CY+IGA+DL I      S 
Sbjct: 63  TTSFLNSLSKKALYFHLCDHQLLIGSGNSSFV-LEKESGKKCYMIGARDLEIIWG--NST 122

Query: 121 PRRKWKYGPQSRSSEMALASYDKWGDIIKIYGRMDSPKLSPKTNYAVYLIFIIVGCRHQ- 180
               W   P SR SE+A      W   ++I GR+++  LSP+TNYA YL+F +V  R+Q 
Sbjct: 123 QYWTWNPNPISRFSEVAELQMVWW---LEIKGRIEARNLSPQTNYAAYLVFKLVEDRYQR 182

Query: 181 -PLRERLVELSLFDEAVEFDEAKLLPFD--EKAIKVPRKRGDGWMEIEMGQIFNEFGEFR 240
              RER V L ++ E  E +E K    D  E ++    +R DGWMEIEMG+IFNE G+  
Sbjct: 183 RGFRERPVLLRVYFEGAEVEEGKTAILDPREGSLVAFEERADGWMEIEMGEIFNELGDDG 242

Query: 241 PITSSIMKVALDNCAKCGLVIEGIEIR 264
            I    +K   +   K GL++EGIEIR
Sbjct: 243 SIIFH-LKEFHNFITKSGLIVEGIEIR 262

[Close]

BLAST of Tan0002404 vs. NCBI nr
Match: XP_023528482.1 (putative F-box protein PP2-B12 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.3 bits (604), Expect = 1.6e-58
Identity = 139/267 (52.06%), Postives = 173/267 (64.79%), Query Frame = 0


Query: 1   MDQLPEDCICSILAFTSQKDVCRSAAVSSTFRSAADFDALWNTFLPADYRQIFSQASPSS 60
           ++QLP +CI +ILAFTS KD CRSA VS  FRSAAD +ALW TFLP+DYRQI SQAS  S
Sbjct: 3   INQLPVECIATILAFTSPKDACRSATVSPAFRSAADSEALWTTFLPSDYRQIISQASSPS 62

Query: 61  SPLLLNSLSKKALYFYLCDHPILTGIGKSSSVLLEKESGKMCYVIGAKDLHIRTDLITSV 120
           +   LNSLSKKALYF+LCD  +L G G +SS  LEKESGK CY+IGA+DL I      S 
Sbjct: 63  TTSFLNSLSKKALYFHLCDRLLLIGSG-NSSFALEKESGKKCYMIGARDLEIIWG--NST 122

Query: 121 PRRKWKYGPQSRSSEMALASYDKWGDIIKIYGRMDSPKLSPKTNYAVYLIFIIVGCRHQ- 180
               W   P SR SE+A      W   ++I GR+++  LSP+TNYA YL+F +V  R+Q 
Sbjct: 123 QYWTWNSNPISRFSEVAELQTVWW---LEIKGRIEARNLSPQTNYAAYLVFKLVEDRYQR 182

Query: 181 -PLRERLVELSLFDEAVEFDEAKLLPFD--EKAIKVPRKRGDGWMEIEMGQIFNEFGEFR 240
              RER V L ++ E  E +E K+   D  E ++    +R DGWMEIEMG+IFNE G+  
Sbjct: 183 RGFRERPVLLRVYFEGAEVEEGKMAILDPREGSLVAFEERADGWMEIEMGEIFNELGDDG 242

Query: 241 PITSSIMKVALDNCAKCGLVIEGIEIR 264
            I    +K   D   K GL++EGIEIR
Sbjct: 243 SIIFH-LKEFHDFITKSGLIVEGIEIR 262

[Close]

BLAST of Tan0002404 vs. NCBI nr
Match: XP_022980373.1 (putative F-box protein PP2-B12 [Cucurbita maxima])

HSP 1 Score: 232.6 bits (592), Expect = 3.9e-57
Identity = 139/267 (52.06%), Postives = 172/267 (64.42%), Query Frame = 0


Query: 1   MDQLPEDCICSILAFTSQKDVCRSAAVSSTFRSAADFDALWNTFLPADYRQIFSQASPSS 60
           ++QLP +CI SILAFTS KD CRSAAVS  FRSAAD +ALW TFLP+DYRQI SQAS  S
Sbjct: 3   INQLPVECISSILAFTSPKDACRSAAVSLAFRSAADSEALWTTFLPSDYRQIISQASSPS 62

Query: 61  SPLLLNSLSKKALYFYLCDHPILTGIGKSSSVLLEKESGKMCYVIGAKDLHIRTDLITSV 120
           +   LNSLSKKALYF+LCD P+L G G +SS  LEK+SGK CY+IGA+DL I      S 
Sbjct: 63  TTSFLNSLSKKALYFHLCDRPLLIGSG-NSSFALEKDSGKKCYLIGARDLGIIWG--NSS 122

Query: 121 PRRKWKYGPQSRSSEMALASYDKWGDIIKIYGRMDSPKLSPKTNYAVYLIFIIVGCRHQ- 180
               W   P SR  E+A      W   ++I G +++  LSP+TNYA YL+F +V  R+Q 
Sbjct: 123 QYWTWNSNPISRFCEVAELQRVWW---LEIKGSIEARNLSPQTNYAAYLVFKLVEDRYQR 182

Query: 181 -PLRERLVELSLFDEAVEFDEAK--LLPFDEKAIKVPRKRGDGWMEIEMGQIFNEFGEFR 240
              RER V L ++ E  E +E K  +L   E +     +R DGWMEIEMG+IFNE G+  
Sbjct: 183 RGFRERPVLLRVYLEGAEVEEGKTAILEPREGSHVAFEERADGWMEIEMGEIFNELGDDG 242

Query: 241 PITSSIMKVALDNCAKCGLVIEGIEIR 264
            I    +K   D   K GL++EGIEIR
Sbjct: 243 SIVCH-LKEFHDFITKSGLIVEGIEIR 262

[Close]

BLAST of Tan0002404 vs. NCBI nr
Match: KAG6582460.1 (putative F-box protein PP2-B12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 231.9 bits (590), Expect = 6.7e-57
Identity = 136/267 (50.94%), Postives = 174/267 (65.17%), Query Frame = 0


Query: 1   MDQLPEDCICSILAFTSQKDVCRSAAVSSTFRSAADFDALWNTFLPADYRQIFSQASPSS 60
           ++QLP +CI SILAFTS KD CRSAAVS  FRSAAD +ALW TFLP+DYRQI SQAS  S
Sbjct: 3   INQLPVECISSILAFTSPKDACRSAAVSPAFRSAADSEALWTTFLPSDYRQIISQASSPS 62

Query: 61  SPLLLNSLSKKALYFYLCDHPILTGIGKSSSVLLEKESGKMCYVIGAKDLHIRTDLITSV 120
           +   LNSLSKKALYF+LCDHP+L G G +SS  LEK+SGK CY+IGA+DL I      S 
Sbjct: 63  TTSFLNSLSKKALYFHLCDHPLLIGSG-NSSFALEKDSGKKCYMIGARDLEIIWG--NSS 122

Query: 121 PRRKWKYGPQSRSSEMALASYDKWGDIIKIYGRMDSPKLSPKTNYAVYLIFIIV--GCRH 180
               W   P SR SE+A+     W   ++I G +++  LS +TNY  YL+F +V    R 
Sbjct: 123 QYWTWNSNPISRFSEVAVLQRVWW---LEIKGSIEARNLSLQTNYGAYLVFRLVEGPYRC 182

Query: 181 QPLRERLVELSLFDEAVEFDEAKLLPFD--EKAIKVPRKRGDGWMEIEMGQIFNEFGEFR 240
           +  ++R V L ++ E  E +E K    D  E ++ V ++R DGWMEIEMG+IFNE  +  
Sbjct: 183 RGFKKRPVLLQVYFEGAEVEEGKTAILDPREGSLVVSQEREDGWMEIEMGEIFNESEDDG 242

Query: 241 PITSSIMKVALDNCAKCGLVIEGIEIR 264
            I   + +V  D   K GL++EGIEIR
Sbjct: 243 SIIFHVKEVD-DFTMKSGLIVEGIEIR 262

[Close]

BLAST of Tan0002404 vs. ExPASy TrEMBL
Match: A0A6J1EFS1 (putative F-box protein PP2-B12 OS=Cucurbita moschata OX=3662 GN=LOC111432116 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 2.0e-59
Identity = 140/267 (52.43%), Postives = 173/267 (64.79%), Query Frame = 0


Query: 1   MDQLPEDCICSILAFTSQKDVCRSAAVSSTFRSAADFDALWNTFLPADYRQIFSQASPSS 60
           ++QLP +CI +ILAFTS KD CRSA VS  FRSAAD +ALW TFLP+DYRQI SQAS  S
Sbjct: 3   INQLPVECIAAILAFTSPKDACRSATVSPAFRSAADSEALWTTFLPSDYRQIISQASSPS 62

Query: 61  SPLLLNSLSKKALYFYLCDHPILTGIGKSSSVLLEKESGKMCYVIGAKDLHIRTDLITSV 120
           +   LNSLSKKALYF+LCDH +L G G SS V LEKESGK CY+IGA+DL I      S 
Sbjct: 63  TTSFLNSLSKKALYFHLCDHQLLIGSGNSSFV-LEKESGKKCYMIGARDLEIIWG--NST 122

Query: 121 PRRKWKYGPQSRSSEMALASYDKWGDIIKIYGRMDSPKLSPKTNYAVYLIFIIVGCRHQ- 180
               W   P SR SE+A      W   ++I GR+++  LSP+TNYA YL+F +V  R+Q 
Sbjct: 123 QYWTWNPNPISRFSEVAELQMVWW---LEIKGRIEARNLSPQTNYAAYLVFKLVEDRYQR 182

Query: 181 -PLRERLVELSLFDEAVEFDEAKLLPFD--EKAIKVPRKRGDGWMEIEMGQIFNEFGEFR 240
              RER V L ++ E  E +E K    D  E ++    +R DGWMEIEMG+IFNE G+  
Sbjct: 183 RGFRERPVLLRVYFEGAEVEEGKTAILDPREGSLVAFEERADGWMEIEMGEIFNELGDDG 242

Query: 241 PITSSIMKVALDNCAKCGLVIEGIEIR 264
            I    +K   +   K GL++EGIEIR
Sbjct: 243 SIIFH-LKEFHNFITKSGLIVEGIEIR 262

[Close]

BLAST of Tan0002404 vs. ExPASy TrEMBL
Match: A0A6J1IZ41 (putative F-box protein PP2-B12 OS=Cucurbita maxima OX=3661 GN=LOC111479760 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.9e-57
Identity = 139/267 (52.06%), Postives = 172/267 (64.42%), Query Frame = 0


Query: 1   MDQLPEDCICSILAFTSQKDVCRSAAVSSTFRSAADFDALWNTFLPADYRQIFSQASPSS 60
           ++QLP +CI SILAFTS KD CRSAAVS  FRSAAD +ALW TFLP+DYRQI SQAS  S
Sbjct: 3   INQLPVECISSILAFTSPKDACRSAAVSLAFRSAADSEALWTTFLPSDYRQIISQASSPS 62

Query: 61  SPLLLNSLSKKALYFYLCDHPILTGIGKSSSVLLEKESGKMCYVIGAKDLHIRTDLITSV 120
           +   LNSLSKKALYF+LCD P+L G G +SS  LEK+SGK CY+IGA+DL I      S 
Sbjct: 63  TTSFLNSLSKKALYFHLCDRPLLIGSG-NSSFALEKDSGKKCYLIGARDLGIIWG--NSS 122

Query: 121 PRRKWKYGPQSRSSEMALASYDKWGDIIKIYGRMDSPKLSPKTNYAVYLIFIIVGCRHQ- 180
               W   P SR  E+A      W   ++I G +++  LSP+TNYA YL+F +V  R+Q 
Sbjct: 123 QYWTWNSNPISRFCEVAELQRVWW---LEIKGSIEARNLSPQTNYAAYLVFKLVEDRYQR 182

Query: 181 -PLRERLVELSLFDEAVEFDEAK--LLPFDEKAIKVPRKRGDGWMEIEMGQIFNEFGEFR 240
              RER V L ++ E  E +E K  +L   E +     +R DGWMEIEMG+IFNE G+  
Sbjct: 183 RGFRERPVLLRVYLEGAEVEEGKTAILEPREGSHVAFEERADGWMEIEMGEIFNELGDDG 242

Query: 241 PITSSIMKVALDNCAKCGLVIEGIEIR 264
            I    +K   D   K GL++EGIEIR
Sbjct: 243 SIVCH-LKEFHDFITKSGLIVEGIEIR 262

[Close]

BLAST of Tan0002404 vs. ExPASy TrEMBL
Match: A0A0A0L6T0 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G132020 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 9.7e-54
Identity = 134/270 (49.63%), Postives = 170/270 (62.96%), Query Frame = 0


Query: 1   MDQLPEDCICSILAFTSQKDVCRSAAVSSTFRSAADFDALWNTFLPADYRQIFSQASPSS 60
           ++QLP +C+ SILAFTS KD CRSA  S  FRSAAD DALW TFLP+DYRQI SQAS SS
Sbjct: 3   INQLPAECLSSILAFTSPKDACRSAVASPAFRSAADSDALWITFLPSDYRQIISQASSSS 62

Query: 61  SPLLLNSLSKKALYFYLCDHPILTGIGKSSSVLLEKESGKMCYVIGAKDLHIRTDLITSV 120
           +   LNSLSKKALYF L DH +  G G SS V LEKESGK CY+IGA+DL I      S 
Sbjct: 63  TSSCLNSLSKKALYFRLSDHLLFIGSGNSSFV-LEKESGKKCYMIGARDLDIIWG--NSP 122

Query: 121 PRRKWKYGPQSRSSEMALASYDKWGDIIKIYGRMDSPKLSPKTNYAVYLIFIIVGCRH-- 180
               WK  P SR  E+A      W   ++I G++++  LSPKT YA Y +F +V  R+  
Sbjct: 123 QYWTWKSIPTSRFREVAELQVVWW---LEIKGKIEARSLSPKTKYAAYFVFKLVEDRYSR 182

Query: 181 QPLRERLVELSLFDEAVEFDE----AKLLPFDEKAIKVPRKRGDGWMEIEMGQIFNEFGE 240
           +  + R V L +  E  E +E      +L   E ++ V  +R DGWME+EMG+IFNE G+
Sbjct: 183 RGFQIRPVSLEVHFEGAEVEEDGRKRVILDPPEGSLVVCEERSDGWMEVEMGEIFNELGD 242

Query: 241 FRPITSSIMKVALDN-CAKCGLVIEGIEIR 264
              I   + ++  DN  +K GL++EGIEIR
Sbjct: 243 DGTIIFHLKQI--DNFISKGGLIVEGIEIR 264

[Close]

BLAST of Tan0002404 vs. ExPASy TrEMBL
Match: A0A6J1BT05 (putative F-box protein PP2-B12 OS=Momordica charantia OX=3673 GN=LOC111005495 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.3e-53
Identity = 128/271 (47.23%), Postives = 167/271 (61.62%), Query Frame = 0


Query: 1   MDQLPEDCICSILAFTSQKDVCRSAAVSSTFRSAADFDALWNTFLPADYRQIFSQASPSS 60
           MD+LP DCI  I+AFTS KD+C SAAVSS FRSAA+ + LW TFLPADYR+I +QA  SS
Sbjct: 1   MDRLPADCISRIMAFTSPKDICSSAAVSSAFRSAAESNTLWKTFLPADYREIIAQAPSSS 60

Query: 61  SPLLLNSLSKKALYFYLCDHPILTGIGKSSSVLLEKESGKMCYVIGAKDLHIRTDLITSV 120
           S  LLNSLS+KALYF+LCDHP+    G +S + LEKESG+   +I A+DLHI    ++S 
Sbjct: 61  SSSLLNSLSEKALYFHLCDHPLRIHSG-NSIIALEKESGRQYIMIAARDLHIMECRLSS- 120

Query: 121 PRRKWKYGPQSRSSEMALASYDKWGDIIKIYGRMDSPKLSPKTNYAVYLIFIIV-----G 180
               W+  P SR  ++     + W    K+ G+++   LSP+TNYA YL+F ++     G
Sbjct: 121 --WTWESVPNSRFFQVGDLYIEPW---FKVKGKIEGRNLSPRTNYAAYLVFKLIVNKSCG 180

Query: 181 CRHQPLRERLVELSLFDEAVEFDEAKLLPFDEKAIKVPRKRGDGWMEIEMGQIFNEFGEF 240
           CR      RL+  + F+E       +L+         P+KRGDGW+EIEM QIFN     
Sbjct: 181 CR------RLLIRTKFEEG----NNRLVQLHPAPKGNPQKRGDGWLEIEMAQIFNN---- 240

Query: 241 RPITSSIMKVALDNCAKCGLVIEGIEIRAMS 267
           RPI    MK   D C  CG ++ GI+IR MS
Sbjct: 241 RPIVFR-MKKFDDRCRNCGFILRGIQIRPMS 249

[Close]

BLAST of Tan0002404 vs. ExPASy TrEMBL
Match: A0A5A7U6B1 (Putative F-box protein PP2-B12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002590 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 2.2e-53
Identity = 131/270 (48.52%), Postives = 169/270 (62.59%), Query Frame = 0


Query: 1   MDQLPEDCICSILAFTSQKDVCRSAAVSSTFRSAADFDALWNTFLPADYRQIFSQASPSS 60
           ++QLP +CI SILAFTS KD CRS  VS TF+ AAD DALW TFLP+DYRQI SQAS SS
Sbjct: 3   INQLPAECISSILAFTSPKDACRSPVVSPTFKYAADSDALWTTFLPSDYRQIISQASSSS 62

Query: 61  SPLLLNSLSKKALYFYLCDHPILTGIGKSSSVLLEKESGKMCYVIGAKDLHIRTDLITSV 120
           +   L+SL KK LYF LCDH +  G G SS V LEKESG+ CY+IGA+DL I      S 
Sbjct: 63  TSSFLDSLPKKDLYFRLCDHLLFIGSGNSSFV-LEKESGRKCYMIGARDLDIIWG--NSP 122

Query: 121 PRRKWKYGPQSRSSEMALASYDKWGDIIKIYGRMDSPKLSPKTNYAVYLIFIIVGCRH-- 180
               WK  P SR  E+A      W   ++I G++++  LSPKT YA Y +F +VG R+  
Sbjct: 123 QYWTWKSFPTSRYPEVAELQVVWW---LEIKGKIEARSLSPKTKYAAYFVFKLVGDRYSR 182

Query: 181 QPLRERLVELSLFDEAVEFDE----AKLLPFDEKAIKVPRKRGDGWMEIEMGQIFNEFGE 240
              + R V L +  E  E +E      +L   E ++ V  +R DGWME+EMG+IFNE G+
Sbjct: 183 HGFQIRPVSLEVHFEGAEVEENGTKRVILDPPEGSLVVCEERSDGWMEVEMGEIFNELGD 242

Query: 241 FRPITSSIMKVALDN-CAKCGLVIEGIEIR 264
              I   + ++  DN  +K GL++EGI+IR
Sbjct: 243 DGTIIFHLKQI--DNFISKGGLIVEGIDIR 264

[Close]

BLAST of Tan0002404 vs. TAIR 10
Match: AT2G02310.1 (phloem protein 2-B6 )

HSP 1 Score: 143.3 bits (360), Expect = 2.9e-34
Identity = 100/278 (35.97%), Postives = 149/278 (53.60%), Query Frame = 0


Query: 2   DQLPEDCICSILAFTSQKDVCRSAAVSSTFRSAADFDALWNTFLPADYRQIFSQASPSSS 61
           D LPEDCI +I++FTS +DVC SA+VS +F  A   D++W  FLP++Y  +       S 
Sbjct: 46  DDLPEDCISNIISFTSPRDVCVSASVSKSFAHAVQCDSIWEKFLPSEYESLIPPWRVFS- 105

Query: 62  PLLLNSLSKKALYFYLCDHPILTGIGKSSSVLLEKESGKMCYVIGAKDLHIRTDLITSVP 121
                  SKK LYF LC  P+L   GK  S  LE  SGK C ++ AK+L I         
Sbjct: 106 -------SKKDLYFTLCYDPVLVEDGK-KSFWLETASGKKCVLLAAKELWI----TGGNN 165

Query: 122 RRKWKYGPQSRSSEMALASYDKWGDII-----KIYGRMDSPKLSPKTNYAVYLIFIIVGC 181
              W++       E+  +S++K  +++     ++ G M +  LS  T+Y+VY+++ I   
Sbjct: 166 PEYWQW------IELCESSFEKVPELLNNRSFQMGGSMSTQILSLGTHYSVYIVYKIKDE 225

Query: 182 RHQPLRERLVELSLFDEAVE-------FDEA--KLLPFDEKAIKVPRKRGDGWMEIEMGQ 241
           RH  LR+  +++ +  +  E       FDE+  K   + +K +   +KRGDGWME E+G 
Sbjct: 226 RH-GLRDLPIQVGVGFKGQEMPKQFICFDESTDKTKEWPKKKLMKSKKRGDGWMEAEIGD 285

Query: 242 IFNEFG--EFRPITSSIMKVALDNCAKCGLVIEGIEIR 264
            FN+ G   F  +  SI+ V   N  KCG++IEGIE R
Sbjct: 286 FFNDGGLMGFDEVEVSIVDVTSPN-LKCGVMIEGIEFR 302

[Close]

BLAST of Tan0002404 vs. TAIR 10
Match: AT2G02340.1 (phloem protein 2-B8 )

HSP 1 Score: 142.9 bits (359), Expect = 3.8e-34
Identity = 100/281 (35.59%), Postives = 141/281 (50.18%), Query Frame = 0


Query: 1   MDQLPEDCICSILAFTSQKDVCRSAAVSSTFRSAADFDALWNTFLPADYRQIFSQASPSS 60
           +D LPE+C+  I++FTS +D C  A+VS TF SA   D +W  F+P +Y  + SQ+    
Sbjct: 36  LDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSR--- 95

Query: 61  SPLLLNSLSKKALYFYLCDHPILTGIGKSSSVLLEKESGKMCYVIGAKDLHIRTDLITSV 120
                  LSKK LYF LCD  +L   GK  S+ +EK + K C +I A +L I      S 
Sbjct: 96  ---AFKFLSKKELYFALCDKSVLIDDGK-KSLWIEKANAKRCIMISAMNLAIAWG--NSP 155

Query: 121 PRRKWKYGPQSRSSEMALASYDKWGDIIKIYGRMDSPKLSPKTNYAVYLIF--------- 180
              +W   PQ+R   +A         + +I GR++S  +SPKT Y+ Y+++         
Sbjct: 156 QSWRWIPDPQARFETVAELLE---VCLFEIRGRINSRVISPKTRYSAYIVYKKLNICYGF 215

Query: 181 ------IIVGCRHQPLRERLVELSLFDEAVEFDEAKLLPFDEKAIKVPRKRGDGWMEIEM 240
                 ++VG   Q L E       FDE +  DE        K +  P +R DGWMEI++
Sbjct: 216 ENVAVEVVVGVVGQDLEESCRRYICFDETM--DEQFRRRDRGKNLVKPERRKDGWMEIKI 275

Query: 241 GQIFNEFGEFRPITSSIMKVALD---NCAKCGLVIEGIEIR 264
           G+ FNE G        I  VAL+      K GL+I+GIEIR
Sbjct: 276 GEFFNEGGLLN--DDEIEMVALEAKQRHWKRGLIIQGIEIR 300

[Close]

BLAST of Tan0002404 vs. TAIR 10
Match: AT2G02250.1 (phloem protein 2-B2 )

HSP 1 Score: 142.5 bits (358), Expect = 4.9e-34
Identity = 95/272 (34.93%), Postives = 148/272 (54.41%), Query Frame = 0


Query: 2   DQLPEDCICSILAFTSQKDVCRSAAVSSTFRSAADFDALWNTFLPADYRQIFSQASPSSS 61
           D LPEDCI +I++FTS +D C +A+VS TF SA + D++W+ FLP+DY  +   +   S 
Sbjct: 48  DNLPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDYSSLVPPSRVFS- 107

Query: 62  PLLLNSLSKKALYFYLCDHPILTGIGKSSSVLLEKESGKMCYVIGAKDLHIRTDLITSVP 121
                  SKK LYF +CD+P+L   G   S  LEKE+GK C+++  K   +    +++  
Sbjct: 108 -------SKKELYFAICDNPVLVEDG-GKSFWLEKENGKKCFMLSPKK-SMWITWVSTPQ 167

Query: 122 RRKWKYGPQSRSSEMALASYDKWGDIIKIYGRMDSPKLSPKTNYAVYLIFIIV-GCRHQP 181
             +W   P++R  E+       W    ++ G M++ +LSP T Y+ Y++F    GC +  
Sbjct: 168 YWRWISIPEARFEEVPELLNVCW---FEVRGGMNTKELSPGTRYSAYIVFKTKNGCPN-- 227

Query: 182 LRERLVELSLFDEAVEFDEAKLL---PFDEKA------IKVPRKRGDGWMEIEMGQIFNE 241
           L +  VE ++     E  +  +    P D++       +  P KR DGWME E+GQ FNE
Sbjct: 228 LGDVPVEATVGLVGQESSQRHIYFVGPSDQRRDRETRDVTRPTKRKDGWMEAELGQFFNE 287

Query: 242 FGEFRPITSSIMKVALDNCAKCGLVIEGIEIR 264
            G    + +SI+++      K GL+I+GIE R
Sbjct: 288 SG-CDVVDTSILEIKTPYW-KRGLIIQGIEFR 302

[Close]

BLAST of Tan0002404 vs. TAIR 10
Match: AT2G02360.1 (phloem protein 2-B10 )

HSP 1 Score: 141.4 bits (355), Expect = 1.1e-33
Identity = 100/280 (35.71%), Postives = 140/280 (50.00%), Query Frame = 0


Query: 2   DQLPEDCICSILAFTSQKDVCRSAAVSSTFRSAADFDALWNTFLPADYRQIFSQASPSSS 61
           D  PEDCI  I++FT+ +D C +A VS TF S    D +W  FLPADY  +   +   S 
Sbjct: 15  DSFPEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLIPPSRVFS- 74

Query: 62  PLLLNSLSKKALYFYLCDHPILTGIGKSSSVLLEKESGKMCYVIGAKDLHIRTDLITSVP 121
                  SKK LYF LC+ P+L    K  SV LEK SGK C ++ A +L I   +    P
Sbjct: 75  -------SKKELYFSLCNDPVLFDDDK-KSVWLEKASGKRCLMLSAMNLSI---IWGDNP 134

Query: 122 RR-KWKYGPQSRSSEMALASYDKWGDIIKIYGRMDSPKLSPKTNYAVYLIF--------- 181
           +  +W   P+SR  ++A      W    +I GR ++  LSP+T Y+ Y++F         
Sbjct: 135 QYWQWIPIPESRFEKVAKLRDVCW---FEIRGRTNTRVLSPRTRYSAYIVFKGVDKCYGF 194

Query: 182 ------IIVGCRHQPLRERLVELSLFDEAVEFDEAKLLPFDEKAIKVPRKRGDGWMEIEM 241
                   VG   Q    RL+    F EA+      ++         P++R DGWMEIE+
Sbjct: 195 QNVAIEAAVGVVGQEPSRRLI---CFSEAIRRGRRNVVK--------PKQREDGWMEIEL 254

Query: 242 GQIFNEFG--EFRPITSSIMKVALDNCAKCGLVIEGIEIR 264
           G+ FN+ G  +   I  S ++    N  KCGL+I+GIEIR
Sbjct: 255 GEFFNDGGIMDNDEIEMSALETKQLN-RKCGLIIQGIEIR 267

[Close]

BLAST of Tan0002404 vs. TAIR 10
Match: AT2G02240.1 (F-box family protein )

HSP 1 Score: 135.6 bits (340), Expect = 6.0e-32
Identity = 97/275 (35.27%), Postives = 143/275 (52.00%), Query Frame = 0


Query: 2   DQLPEDCICSILAFTSQKDVCRSAAVSSTFRSAADFDALWNTFLPADYRQIFSQASPSSS 61
           D LPEDCI +I++FTS +D C +A+VS TF SA   D +W+ FLP +Y  + S++   + 
Sbjct: 62  DVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSRVFA- 121

Query: 62  PLLLNSLSKKALYFYLCDHPILTGIGKSSSVLLEKESGKMCYVIGAKDLHIRTDLITSVP 121
                  SKK LYF LC +P+L   GK  S  LEK SGK C ++ +K+L I     +S  
Sbjct: 122 -------SKKELYFALCHNPVLIEDGK-KSFWLEKASGKRCIMLSSKELWITWG--SSPE 181

Query: 122 RRKWKYGPQSRSSEMALASYDKWGDIIKIYGRMDSPKLSPKTNYAVYLIF----IIVGCR 181
             +W   P+SR +++A      W    +I G+  +  LSP T Y+ Y++F       G  
Sbjct: 182 YWQWISIPESRFNKIAELLDVCW---FEIRGKTSARVLSPGTRYSAYIVFKTKDRCPGLG 241

Query: 182 HQPLRERLVELSLFDEAVEFDEAKLL---PFDEKA------IKVPRKRGDGWMEIEMGQI 241
           H P     VE+ L     E  +  +    P D +       +  P +R DGWME E+G+ 
Sbjct: 242 HLP-----VEVGLGLVGQESSKRFIYFIGPRDRRGRRETRDVTKPDQREDGWMEAELGEF 301

Query: 242 FNEFGEFRPITSSIMKVALDNCAKCGLVIEGIEIR 264
           FNE      I  S++++   +  K GL+I+GIE R
Sbjct: 302 FNE-ERCDEIEFSVIEIKSPSW-KSGLIIQGIEFR 315

The following BLAST results are available for this feature:

BLAST of Tan0002404 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVR0	4.1e-33	35.97	Putative F-box protein PP2-B6 OS=Arabidopsis thaliana OX=3702 GN=PP2B6 PE=4 SV=1	[more]
Q9ZVQ8	5.3e-33	35.59	Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1	[more]
Q9ZVR5	7.0e-33	34.93	Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2	[more]
Q9ZVQ6	1.6e-32	35.71	F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1	[more]
Q3E6P4	8.5e-31	35.27	F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1	[more]

BLAST of Tan0002404 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6582459.1	1.1e-59	52.81	putative F-box protein PP2-B12, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022924695.1	4.2e-59	52.43	putative F-box protein PP2-B12 [Cucurbita moschata]	[more]
XP_023528482.1	1.6e-58	52.06	putative F-box protein PP2-B12 [Cucurbita pepo subsp. pepo]	[more]
XP_022980373.1	3.9e-57	52.06	putative F-box protein PP2-B12 [Cucurbita maxima]	[more]
KAG6582460.1	6.7e-57	50.94	putative F-box protein PP2-B12, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Tan0002404 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EFS1	2.0e-59	52.43	putative F-box protein PP2-B12 OS=Cucurbita moschata OX=3662 GN=LOC111432116 PE=...	[more]
A0A6J1IZ41	1.9e-57	52.06	putative F-box protein PP2-B12 OS=Cucurbita maxima OX=3661 GN=LOC111479760 PE=4 ...	[more]
A0A0A0L6T0	9.7e-54	49.63	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G132020 PE=4 ...	[more]
A0A6J1BT05	1.3e-53	47.23	putative F-box protein PP2-B12 OS=Momordica charantia OX=3673 GN=LOC111005495 PE...	[more]
A0A5A7U6B1	2.2e-53	48.52	Putative F-box protein PP2-B12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Tan0002404 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02310.1	2.9e-34	35.97	phloem protein 2-B6	[more]
AT2G02340.1	3.8e-34	35.59	phloem protein 2-B8	[more]
AT2G02250.1	4.9e-34	34.93	phloem protein 2-B2	[more]
AT2G02360.1	1.1e-33	35.71	phloem protein 2-B10	[more]
AT2G02240.1	6.0e-32	35.27	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 4..44 e-value: 1.0E-4 score: 31.6
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 2..44 e-value: 3.4E-6 score: 26.8
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 1..44 score: 9.153042
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 100..263 e-value: 3.9E-20 score: 72.4
None	No IPR available	GENE3D	1.20.1280.50		coord: 1..80 e-value: 2.6E-6 score: 29.1
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 3..264
None	No IPR available	PANTHER	PTHR32278:SF71	SUBFAMILY NOT NAMED	coord: 3..264
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 2..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0002404.1	Tan0002404.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding