Tan0002403 (gene) Snake gourd v1

Overview
NameTan0002403
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDisease resistance protein RGA2
LocationLG06: 39283277 .. 39289768 (-)
RNA-Seq ExpressionTan0002403
SyntenyTan0002403
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGATGAGAGGACAGTTGTATATATGTGTTGGAAGCTGGTATTGCAACATTATTATCATAAGCTCATTTTTGACAAAGTATTATATGAAACCATGGCGGAAGGAATTCTGTTTACTGTTGCTGGGGAGATATTGATGAAGTTAAGCTCTCAAGCTTCACAACGACTTGGTATGCTAATTGGACTGAAGGATGATCTTGACAAACTCAATAGCAATGTTTCGTCCATTCAGGCTGTACTTCTTGATGCAGAGGAGCGTCCAACTAAAAGTCACTCTCTAAAAAATTGGCTTGAAAAGTTGGGAGAAGCTCTTTATGATGCAGATGATGTGGTTGATGAATTCTCTGGTGAGGCTATCCGTCGTGAAGTAATGACAAGAGGAAAAAATGCAAAACAGGTAAGGATCTTCTTTTCCAGATCTAACCAACTTGCATTTAACTATAGGATGACACATGAAGTAAAGAGAATCAGAGAAAGACTAGATGTTATTTCTGCTGAAAAGAACAACTTTCATTTGAATCAAATCTTTGAACCAAGAATACAACATGATTTGTTTCATCAAAATGATAGAATCGGCAACTGGTGAGCAACCCAAAGCACAAGAAATGGATCCATTACGACATGAGCTTCAAAAAGTGATAGGTGGAAAGAAGTATTTGTTGGTTATGGATGATATATGGAATGAAAGTGAAAAAAAATGGGAGGATTTGAAACCTTTGTTAATGTATGGCGCGAGAGGGAGTAAGATTATTATCACAAAGCGTGATAGTAAAGTAGCTATAGAATTAGTCAAAAGCATGACCTTCTCGTTCCCTTTAAAAACCTTGCATGAGAACACTTCTTGGTTATTGTTTAGAGAAGTGGCATTCAAACAAGGCAAAGAGCCAACAAATTCAGTCTTGCTATCATTGGGAAAAGAAATTGTAGCAACATGTGGAGGTGTTCCTCTGGTAATAAGACACATAGGACGCTTGTTGTACTCTAAAACATCAGAAGAAGAGTGGATGTGCTTCAAAAATAATGAACTTTTGAAAATCACTCAAGAAAATAATGATATAACATCCATATTAGAATTGAGTTATAATCATCTCCCATCACATTTGAAGCAATGTTTTGCCTATTCATCCTTGTTTTCTAAAGGAAGGGAAATAAAAATTAATGATTTGATTCGACAATGGGTGGCTCATGGTTTTATTAAATCCGAAGATATAGGAAAGAGCCATTTCGAGGAATTATGTTGGAGGTTTTTTTTATGAAAATTCTAGTAATGACTATAACCTCAACGATTTTGTTTGTATGCATGATGTCATTCGTGAGCTTGCAAGGAAGGTAGCAGGAAAGAAATTATATGTACGTGGAAACCCAGAAAATGATTATACTGTCAGTGAACAAACTCGCCATATTTCATTTGGCTACAAAATAAAACCATGGGAGGATGTTGTATCTAAATTACGCAATGCTAAAGGATTAAGAACACTCCTATTTTATTCTGGCTGTGAGAAGAGGAATACCGCCAGATTTTTGGATGAACTATTTTCTAGTGTTCCACGTTTGAGAGTTTTAGGTCTTAATTCCTCAAAAATTGAAACAATTCCAGATTCAATAAGAAAACTCAGACATCTTCGATATCTAGATCTGTCTGGGAATCGTAGGATCAAATCACTTCCAAATTCCATCTCTAAATTGCAAAATTTGCAAACTCTAAAGCTAACAAGTTGCTATCTGCTAAAGGAATTGCCAAGGGATACCAAGAACCTAGTTAATCTAAGGCATCTTCATTTTTCTTTTACAGAAATAACCCATATGCCAAAAGGGATGGAGAAGTTGACCTGTCTACAAACAATAAGTTTATTTATATTGGACGGCAAAACTTTGAATAAGGTAAGTGAATTGAATCAGCTCAACCATTTAAGTGGAAAGGAAATAAGGATCATTGGATTAGAGGAGGTAAGGCATAGTTCATCTGAAGTTGGGCCAGTAAAGTTGTTCAAAGACGAAAAAGGTTTTCAAAATGTGATATTGGAATGGAAACCAAGTGAGGATGAATACAGAGGTAATGCCGATGAAACAGTAATGGAAGGCTTAGAACCACGTCCAAATATTGAATTTTTAAGAATTTATGGGTACAGTGGAGTAAGATTATCAAATTGGGTATGGTCCTACTCTGCTTTGAAGTTAATTACCAGAATTCAAATTGTTAGATGCCAAAGGCTGCAACATCTACCTTCCTTCAACCGCCTTCAGAGTCTTGAAGAGCTATATTTAGAAGAGTTGCCTAATTTGAAAAGATGGTGGCAGATTGAGAATGAGTCTCCAACAATATTTCCTGATCGGCTTAAGAGACTTGAAATCCACCATTGTCCCAACTTAACTTCCATTCCCAACCTAGCACCTTCCACTCAAGTATATGTTTTTTTACATGATGTTGCTGATCAGGTGGTGACTTCCATTGGTCCAATGTTGTCCTGTTTGAGTGCTCTAACACTAAAACAAATTAACGATCTCAAATATCTACCAATGGAATTTGAGAACCAAAACCTTATTTCTTCCCTTATTGCCCTTCAGTTCTTGGAAATTAACAAATGCCCCAACTTCTTGAGTTTACCGGAATCGATTGGCCTCCTCCCTTACCTTGAAAGGATCAGTATTATTAATTGCCCCAAATTAAAATCACTGCCCGAAGGAATTCGGCCACTCAAAACTTTGCAATGGCTTGACATTGTGAAATGCCCAGAACTTGAACAGTGATGCAAGCAGGGAGGAGAGGATTGGTCTAAGATTTCTCACGTCCCCATCGTTTCTTACACACAGTCTCCTTCAGGTATTCTACACACAATCCCTTTCCTTCGTAATCATATCTGTTTGATAAAAAAAAAGTATTGAGGAAGCAATAATCAAATCAAAGTCTCAATGTTTGTTGAACAAAGAGAGAAAATGAGAGAGTGAAATCCAATAAATGAATAGTCTTCTTATTGAAATAGAAAATATTGGTAATGCATCCTTCACATGGAAGTTCGTCCTTTTATAGGTACGAGGAATTGACACTCATTTAATTTTTCAACATTAAAAGCATTAGAAACTTACAAACTTAAAAACCAAAATTTAAAAGACAAAAAATCGAAATGTGTTAAATCTAACTTTTAAAAGAAAAAACATAAAACATTAATTGAAAAACTTAACGTAATTAAAAAAGAAAAAACTCATAACTCAACAATATCTATATTATCTATCATCTTTATTTTCCTTCCATTATCATTCTATTTCATATGCAGTTCTAGATATTATTCAGTATCTGTTTATGGACCCGATTGAAAAATAATTAAAATCATAGAGATCAAATTGAATTGTAAGTACAGAGTTTATAAGAATGAAAATTGTAATGCGTAATTCACATTGACTTATATTATCTAGTTCAAAAATTATAATATTCCTAAAAGTTGACAATTTTTATATGTTGCAGGAACATGGGGAAAAATCAAAGATAAAGATAGCCATCGAATGTTACATTCTCTTTTGCATAATATAGGTATGAACATTCATAAATCTGAACCTACTATGACCTCGATTTTCAACGTTGATTTCAGGCTTTGACTGTTAATCTTATATCACCCTCTTTTTTGTTGCCAAATTATACGGTAAAGCCACTTTTTACCCCCTCCTCTGTATTTTACCTTTGGGATAAAATTAGGTTACACTTTGTCAAAAGCAAAATAAGTCCACTAACGCTAGTTAAAATAAATTGCATTTCACTCTATTTCAAATACAAGTCAAATTTGAATAGAATCTCATGTGTTCAATCTATAATCGGTTGGCAGAACAACTTCTTAGAATTGTGTTGGTGGACGAGAGAGGTTGCTTGAAATTTGAGATTAAATAGGTTGAGATTAGATAGTGATAATGACTTCATATTTTATCAGGCAACTATAATTTTTATGCTATAAAATAGGTTTCAAATTTTCAACTCAATAACGTGTTTACTTCTTTCTATTTCTTCGATTTCTACTGTTCGAACAATGTTTTATATCTAACATAATTTGTATTAGGGGCACTTATATAGATGACAAAATAATCTATACCAATTGCATGTGTGCCATTTCATATATTAGATTTGCAAATAAGCAAAAACAACAGGTGTAGCCCAATCAGACAGCAAAAAGTCGAAAATGCCCCCGACATGTTTTCCAATATGGAGAATATCAGTCATCTTTGGACGATAGTTGTGATAGACTAACGATATACCTAACTAAAGATATTCTTATTTGAAGTTGATCAATAATATATTAGTAATTAACTAGCATATGTGATACACATTATCACTGGTGTACTATTGATATATTTTAGTTTTCACGGGGTAGTTCGTAAAAAGTTTTTAGTAGTTTATCAATGGTATACTATTGATAGACCAACAATATACATAATATAAAGTATATCACTGATAAACTACTGATATACTTCTATGAAATTTATCAAGAAGACATAATTAGAATGATACACATGATATTATACATAATATAGAGGATATCACTAATACACTTTCTTATCTAATTTATTTTATGCAATTTAATATGAAATTTGTCAGTAGTTTATCAATGATATATCGTTGACATAATAGTAATATGCCTAATATAAAGTATATAACTGATTTATTTCTAATATACTTATATGAAATTTATCAAAAATATATCAATAATTCACATATGAGTTATACATAATGTAGAGTATAGATATAATTTATTTTAGTTCTGTACTTTATTAATGATTTATATTTACTAGTTTTTAGTAATAGACTTGTTTAATTGATGCACTTAAGTAGTAGTATATAATAAATTCATATTTAATATATAAAATATATCTAAAATGAAATATATCACTCATATACTACTGGTATATTCAATGTTAGGTATAAAATGAAGTATATAAATGATATACTAAGTATGCAAAATTTCTATTATATGCTCCACACATATATATAAAATATACCTTACAAAAATGTATCGGTAATATATCAGTAATATATTGCTAATATACATTGTTTTATGTATATATTATTTGATTGATGTACCAAATATAAAATATATCTGATATATTACTGATATATCAAATATTAAGTATATCAGATACCCTACTGATACACGAACGAAGATAAAATTGGAACAGTGCAAAAACATAAATTAGATATTAAAACTTTTTGCTATATTTGCAAATCCAAAAAATATAGTTAGATTTTCAATTATTTTAATATTTTTTTTTGCTATCTATTACAATTCTCCTTTGTATTACGGTTACTGTGATAGGACTATTATTAATAGTTAGTTGGTGATTGGCATGTTCAGAGTTGAGCAAAAGCTACTGAAAGATCTATTTTTATCTAAATTATCCATTTGAAAGTACTCAAATTAATGATAGATAATTTTTTTTTTTTTTGTAAATCTATGATTATTTTATTGATTTCATAATAATGAGAAGTTTAATGTTATTGAATCTTTCCCTCGGAAATAATGTGATTGATTTTGAACATTTGTTTCCGGAAGGATTAGGATGGGAGAAGGTCAACAGAATAAAAGGTGGCATTACATATTTTTTAGGAGAATTATAATGGGTAGCAAAAATATTAGGATAATTTTAAATCTAACTATAGTTTTTGGAGATTTACAAATATAGCAAAAAATTTTACACCTAATTTTTATTTTTTATTATTCTAGTATTACCCTCATTAATATATTAGCAGGTATATCAATAGTATATATGATATACTTCATATTTGGTATATCAATAGTTGATAGCACTGTAAAAGTACAACTTTATGATCTTAGTTCATGTTAGTTTTGTTGCCCTCACGTGCCTATTTCAATATTTATATAGGGATTGAGCAAATCGGACCCATTTGGAAGACTTCAAATGAATCAAGTTTAAAAGGGGTGAGTCCAATTTTAATATAATCAGAACCATCGGGAGTTTCTTAATAAGCCAGAAAAATGTCATTTTACAGACCTTTCCTATGCAGCTTCAAGCGACAATAATCACAGCCGTTTTGAATATATTGTCCAGTCATTCTCCAGATAAAGAGTATTTGGGAAAAGATATTGGACAAGCATGGGCTGATGAGCCTTTTATAAAGGAAGCATTTGAGAAGTTCAGTGGGAAATTGAAAGAATTGGAAGGAATGCCAACCATATGCTAAAGAACAGACATGGAGCTGGGGCTGCGCCTTATCAACTTTTGAAGCCTGAATCGAGTCTGGAGTCACAGGAACAGGAATTTCTTATAGTATCTCCATTTTTATCGGACTCCAGAAAAGGAGTTTCTTATAGTATCTCCCTTTAAATCTAATCTCGAGTTTATCAAGAATATATAAGTATGTCACATATATATCTTAATATAAATATATTTTATTTTAGGAAAATTGTAATGAGTAACACAAAATATTAGCATATTTGCAAACCTATGATTTTTTAGATTTGCAAATCTAGAAAAAAATTTTAAATTTGATTTCCG

mRNA sequence

CGATGAGAGGACAGTTGTATATATGTGTTGGAAGCTGGTATTGCAACATTATTATCATAAGCTCATTTTTGACAAAGTATTATATGAAACCATGGCGGAAGGAATTCTGTTTACTGTTGCTGGGGAGATATTGATGAAGTTAAGCTCTCAAGCTTCACAACGACTTGGTATGCTAATTGGACTGAAGGATGATCTTGACAAACTCAATAGCAATGTTTCGTCCATTCAGGCTGTACTTCTTGATGCAGAGGAGCGTCCAACTAAAAGTCACTCTCTAAAAAATTGGCTTGAAAAGTTGGGAGAAGCTCTTTATGATGCAGATGATGTGGTTGATGAATTCTCTGGTGAGGCTATCCGTCGTGAAGTAATGACAAGAGGAAAAAATGCAAAACAGGAACATGGGGAAAAATCAAAGATAAAGATAGCCATCGAATGTTACATTCTCTTTTGCATAATATAGGGATTGAGCAAATCGGACCCATTTGGAAGACTTCAAATGAATCAAGTTTAAAAGGGCTTCAAGCGACAATAATCACAGCCGTTTTGAATATATTGTCCAGTCATTCTCCAGATAAAGAGTATTTGGGAAAAGATATTGGACAAGCATGGGCTGATGAGCCTTTTATAAAGGAAGCATTTGAGAAGTTCAGTGGGAAATTGAAAGAATTGGAAGGAATGCCAACCATATGCTAAAGAACAGACATGGAGCTGGGGCTGCGCCTTATCAACTTTTGAAGCCTGAATCGAGTCTGGAGTCACAGGAACAGGAATTTCTTATAGTATCTCCATTTTTATCGGACTCCAGAAAAGGAGTTTCTTATAGTATCTCCCTTTAAATCTAATCTCGAGTTTATCAAGAATATATAAGTATGTCACATATATATCTTAATATAAATATATTTTATTTTAGGAAAATTGTAATGAGTAACACAAAATATTAGCATATTTGCAAACCTATGATTTTTTAGATTTGCAAATCTAGAAAAAAATTTTAAATTTGATTTCCG

Coding sequence (CDS)

ATGTGTTGGAAGCTGGTATTGCAACATTATTATCATAAGCTCATTTTTGACAAAGTATTATATGAAACCATGGCGGAAGGAATTCTGTTTACTGTTGCTGGGGAGATATTGATGAAGTTAAGCTCTCAAGCTTCACAACGACTTGGTATGCTAATTGGACTGAAGGATGATCTTGACAAACTCAATAGCAATGTTTCGTCCATTCAGGCTGTACTTCTTGATGCAGAGGAGCGTCCAACTAAAAGTCACTCTCTAAAAAATTGGCTTGAAAAGTTGGGAGAAGCTCTTTATGATGCAGATGATGTGGTTGATGAATTCTCTGGTGAGGCTATCCGTCGTGAAGTAATGACAAGAGGAAAAAATGCAAAACAGGAACATGGGGAAAAATCAAAGATAAAGATAGCCATCGAATGTTACATTCTCTTTTGCATAATATAG

Protein sequence

MCWKLVLQHYYHKLIFDKVLYETMAEGILFTVAGEILMKLSSQASQRLGMLIGLKDDLDKLNSNVSSIQAVLLDAEERPTKSHSLKNWLEKLGEALYDADDVVDEFSGEAIRREVMTRGKNAKQEHGEKSKIKIAIECYILFCII
Homology
[Close]
BLAST of Tan0002403 vs. ExPASy Swiss-Prot
Match: Q7XA39 (Putative disease resistance protein RGA4 OS=Solanum bulbocastanum OX=147425 GN=RGA4 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.0e-10
Identity = 33/79 (41.77%), Postives = 52/79 (65.82%), Query Frame = 0 

Query: 36  ILMKLSSQASQRLGMLIGLKDDLDKLNSNVSSIQAVLLDAEERPTKSHSLKNWLEKLGEA 95
           +L  L+S    +L ++ G + + +KL+S  S+IQAVL DA+E+  K  +++NWL+KL  A
Sbjct: 9   LLENLTSFIGDKLVLIFGFEKECEKLSSVFSTIQAVLQDAQEKQLKDKAIENWLQKLNSA 68

Query: 96  LYDADDVVDEFSGEAIRRE 115
            Y+ DD++ E   EAIR E
Sbjct: 69  AYEVDDILGECKNEAIRFE 87

[Close]
BLAST of Tan0002403 vs. ExPASy Swiss-Prot
Match: Q7XA42 (Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=RGA1 PE=2 SV=2)

HSP 1 Score: 65.1 bits (157), Expect = 7.6e-10
Identity = 32/77 (41.56%), Postives = 49/77 (63.64%), Query Frame = 0 

Query: 36  ILMKLSSQASQRLGMLIGLKDDLDKLNSNVSSIQAVLLDAEERPTKSHSLKNWLEKLGEA 95
           +L  L+S     L +L G +D+  +L+S  S+IQAVL DA+E+      L+NWL+KL  A
Sbjct: 9   VLDNLTSFLKGELVLLFGFQDEFQRLSSMFSTIQAVLEDAQEKQLNDKPLENWLQKLNAA 68

Query: 96  LYDADDVVDEFSGEAIR 113
            Y+ DD++DE+  +A R
Sbjct: 69  TYEVDDILDEYKTKATR 85

[Close]
BLAST of Tan0002403 vs. ExPASy Swiss-Prot
Match: Q7XBQ9 (Disease resistance protein RGA2 OS=Solanum bulbocastanum OX=147425 GN=RGA2 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 7.6e-10
Identity = 32/77 (41.56%), Postives = 50/77 (64.94%), Query Frame = 0 

Query: 36  ILMKLSSQASQRLGMLIGLKDDLDKLNSNVSSIQAVLLDAEERPTKSHSLKNWLEKLGEA 95
           +L  L+S     L +L G +D+  +L+S  S+IQAVL DA+E+   +  L+NWL+KL  A
Sbjct: 9   LLDNLTSFLKGELVLLFGFQDEFQRLSSMFSTIQAVLEDAQEKQLNNKPLENWLQKLNAA 68

Query: 96  LYDADDVVDEFSGEAIR 113
            Y+ DD++DE+  +A R
Sbjct: 69  TYEVDDILDEYKTKATR 85

[Close]
BLAST of Tan0002403 vs. ExPASy Swiss-Prot
Match: Q7XA40 (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 2.9e-09
Identity = 35/97 (36.08%), Postives = 55/97 (56.70%), Query Frame = 0 

Query: 24  MAEGILFTVAGEILMKLSSQASQRLGMLIGLKDDLDKLNSNVSSIQAVLLDAEERPTKSH 83
           MAE  L  +   +   +  +    LG++ G + +  KL+S  S IQAVL DA+E+  K  
Sbjct: 1   MAEAFLQVLLDNLTFFIQGE----LGLVFGFEKEFKKLSSMFSMIQAVLEDAQEKQLKYK 60

Query: 84  SLKNWLEKLGEALYDADDVVDEFSGEAIRREVMTRGK 121
           ++KNWL+KL  A Y+ DD++D+   EA R +    G+
Sbjct: 61  AIKNWLQKLNVAAYEVDDILDDCKTEAARFKQAVLGR 93

[Close]
BLAST of Tan0002403 vs. ExPASy Swiss-Prot
Match: P0C8S1 (Probable disease resistance RPP8-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RPP8L2 PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 5.6e-05
Identity = 34/118 (28.81%), Postives = 68/118 (57.63%), Query Frame = 0 

Query: 24  MAEGILFTVAGEILMKLSSQASQRLGMLIGLKDDLDKLNSNVSSIQAVLLDAEERPTKSH 83
           MAE ++ +   E L +L S+ S RL    G+ + +D L   +  +Q++L DA+ +  ++ 
Sbjct: 1   MAEAVV-SFGVEKLWELLSRESARLN---GIDEQVDGLKRQLGRLQSLLKDADAKKNETE 60

Query: 84  SLKNWLEKLGEALYDADDVVDEFSGEAIRREVMTRGKNAKQEHGEKSKIKIAIECYIL 142
            ++N+LE + + +YDADD+++ F    +  E+  RGK    E G K +++  + C+++
Sbjct: 61  RVRNFLEDVKDIVYDADDIIESF----LLNEL--RGK----EKGIKKQVR-TLACFLV 103

[Close]
BLAST of Tan0002403 vs. NCBI nr
Match: XP_022155938.1 (putative disease resistance protein RGA4 [Momordica charantia])

HSP 1 Score: 142.5 bits (358), Expect = 2.8e-30
Identity = 76/101 (75.25%), Postives = 89/101 (88.12%), Query Frame = 0 

Query: 24  MAEGILFTVAGEILMKLSSQASQRLGMLIGLKDDLDKLNSNVSSIQAVLLDAEERPTKSH 83
           MAEGILF VAGEILMKLSS+ASQ+LGML GLK+DL KL ++VS+I+A+LLDAEER TKSH
Sbjct: 1   MAEGILFHVAGEILMKLSSEASQQLGMLWGLKNDLTKLTNSVSTIKALLLDAEERQTKSH 60

Query: 84  SLKNWLEKLGEALYDADDVVDEFSGEAIRREVMTRGKNAKQ 125
           S+K+WLEKL EALYDADDV++EFS E+ RRE MTR K  KQ
Sbjct: 61  SVKDWLEKLKEALYDADDVLNEFSYESRRREGMTREKMVKQ 101

[Close]
BLAST of Tan0002403 vs. NCBI nr
Match: XP_038897566.1 (putative disease resistance protein RGA4 [Benincasa hispida])

HSP 1 Score: 142.1 bits (357), Expect = 3.7e-30
Identity = 74/101 (73.27%), Postives = 85/101 (84.16%), Query Frame = 0 

Query: 24  MAEGILFTVAGEILMKLSSQASQRLGMLIGLKDDLDKLNSNVSSIQAVLLDAEERPTKSH 83
           MAE ILF +AGEILMKLSSQA QRLGML GLKD+L+KL + VS+I+ VLLDAE R TK H
Sbjct: 1   MAEAILFDIAGEILMKLSSQAFQRLGMLFGLKDNLNKLTATVSTIKDVLLDAEGRQTKGH 60

Query: 84  SLKNWLEKLGEALYDADDVVDEFSGEAIRREVMTRGKNAKQ 125
            L+NWL+KL EALYDA+DV+DE S EA+ REVMTR KNAKQ
Sbjct: 61  LLENWLQKLEEALYDAEDVLDELSTEALHREVMTRDKNAKQ 101

[Close]
BLAST of Tan0002403 vs. NCBI nr
Match: XP_031745107.1 (putative disease resistance protein RGA4 [Cucumis sativus])

HSP 1 Score: 138.7 bits (348), Expect = 4.1e-29
Identity = 76/102 (74.51%), Postives = 85/102 (83.33%), Query Frame = 0 

Query: 24  MAEGILFTVAGEILMKLSSQASQRLGMLIGLKDDLDKLNSNVSSIQAVLLDAEERPTKSH 83
           MAE ILF VAGEILMKLSSQA QRLGML GLK DL+KL + VS+I+ VLLDAE R TKSH
Sbjct: 1   MAEAILFQVAGEILMKLSSQAFQRLGMLFGLKGDLNKLTTTVSTIKDVLLDAEGRQTKSH 60

Query: 84  SLKNWLEKLGEALYDADDVVDEFSGEAIRREVMTRG-KNAKQ 125
            L+NWL KL EALYDA+DV+DE S EA+RRE+MTR  KNAKQ
Sbjct: 61  LLQNWLHKLEEALYDAEDVLDELSTEALRRELMTRDHKNAKQ 102

[Close]
BLAST of Tan0002403 vs. NCBI nr
Match: KAE8646395.1 (hypothetical protein Csa_016171 [Cucumis sativus])

HSP 1 Score: 138.7 bits (348), Expect = 4.1e-29
Identity = 76/102 (74.51%), Postives = 85/102 (83.33%), Query Frame = 0 

Query: 24  MAEGILFTVAGEILMKLSSQASQRLGMLIGLKDDLDKLNSNVSSIQAVLLDAEERPTKSH 83
           MAE ILF VAGEILMKLSSQA QRLGML GLK DL+KL + VS+I+ VLLDAE R TKSH
Sbjct: 1   MAEAILFQVAGEILMKLSSQAFQRLGMLFGLKGDLNKLTTTVSTIKDVLLDAEGRQTKSH 60

Query: 84  SLKNWLEKLGEALYDADDVVDEFSGEAIRREVMTRG-KNAKQ 125
            L+NWL KL EALYDA+DV+DE S EA+RRE+MTR  KNAKQ
Sbjct: 61  LLQNWLHKLEEALYDAEDVLDELSTEALRRELMTRDHKNAKQ 102

[Close]
BLAST of Tan0002403 vs. NCBI nr
Match: XP_038896095.1 (putative disease resistance protein RGA4 [Benincasa hispida])

HSP 1 Score: 132.9 bits (333), Expect = 2.3e-27
Identity = 71/101 (70.30%), Postives = 84/101 (83.17%), Query Frame = 0 

Query: 24  MAEGILFTVAGEILMKLSSQASQRLGMLIGLKDDLDKLNSNVSSIQAVLLDAEERPTKSH 83
           MAEGILF +AGEI+ KLSS A Q+LGML G+ DDL KL S+VS+I+AVLLDAEER T S+
Sbjct: 1   MAEGILFNLAGEIIKKLSSLAFQQLGMLWGVNDDLTKLTSSVSAIKAVLLDAEERQTGSN 60

Query: 84  SLKNWLEKLGEALYDADDVVDEFSGEAIRREVMTRGKNAKQ 125
           SL++WL KL EALYDA+DV+DE S EA+ REVMT GK AKQ
Sbjct: 61  SLQDWLGKLKEALYDAEDVLDEISYEALHREVMTAGKKAKQ 101

[Close]
BLAST of Tan0002403 vs. ExPASy TrEMBL
Match: A0A6J1DP92 (putative disease resistance protein RGA4 OS=Momordica charantia OX=3673 GN=LOC111022938 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.4e-30
Identity = 76/101 (75.25%), Postives = 89/101 (88.12%), Query Frame = 0 

Query: 24  MAEGILFTVAGEILMKLSSQASQRLGMLIGLKDDLDKLNSNVSSIQAVLLDAEERPTKSH 83
           MAEGILF VAGEILMKLSS+ASQ+LGML GLK+DL KL ++VS+I+A+LLDAEER TKSH
Sbjct: 1   MAEGILFHVAGEILMKLSSEASQQLGMLWGLKNDLTKLTNSVSTIKALLLDAEERQTKSH 60

Query: 84  SLKNWLEKLGEALYDADDVVDEFSGEAIRREVMTRGKNAKQ 125
           S+K+WLEKL EALYDADDV++EFS E+ RRE MTR K  KQ
Sbjct: 61  SVKDWLEKLKEALYDADDVLNEFSYESRRREGMTREKMVKQ 101

[Close]
BLAST of Tan0002403 vs. ExPASy TrEMBL
Match: A0A0A0K603 (Rx_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G426510 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 2.0e-29
Identity = 76/102 (74.51%), Postives = 85/102 (83.33%), Query Frame = 0 

Query: 24  MAEGILFTVAGEILMKLSSQASQRLGMLIGLKDDLDKLNSNVSSIQAVLLDAEERPTKSH 83
           MAE ILF VAGEILMKLSSQA QRLGML GLK DL+KL + VS+I+ VLLDAE R TKSH
Sbjct: 1   MAEAILFQVAGEILMKLSSQAFQRLGMLFGLKGDLNKLTTTVSTIKDVLLDAEGRQTKSH 60

Query: 84  SLKNWLEKLGEALYDADDVVDEFSGEAIRREVMTRG-KNAKQ 125
            L+NWL KL EALYDA+DV+DE S EA+RRE+MTR  KNAKQ
Sbjct: 61  LLQNWLHKLEEALYDAEDVLDELSTEALRRELMTRDHKNAKQ 102

[Close]
BLAST of Tan0002403 vs. ExPASy TrEMBL
Match: A0A6J1GPK9 (putative disease resistance protein RGA4 OS=Cucurbita moschata OX=3662 GN=LOC111456321 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 3.5e-26
Identity = 67/101 (66.34%), Postives = 84/101 (83.17%), Query Frame = 0 

Query: 24  MAEGILFTVAGEILMKLSSQASQRLGMLIGLKDDLDKLNSNVSSIQAVLLDAEERPTKSH 83
           MAEG+LF +A +I+ KLSS ASQ+LGML G+KD+L +L S+VS+I+AV+LDAEER TKSH
Sbjct: 1   MAEGVLFNLAADIIKKLSSLASQQLGMLWGVKDELTELKSSVSAIKAVVLDAEERQTKSH 60

Query: 84  SLKNWLEKLGEALYDADDVVDEFSGEAIRREVMTRGKNAKQ 125
            LK+WLEKL EALYDA+DV+DE SGEA+R     RG+ AKQ
Sbjct: 61  FLKDWLEKLKEALYDAEDVLDEISGEAVR-----RGRKAKQ 96

[Close]
BLAST of Tan0002403 vs. ExPASy TrEMBL
Match: A0A6J1D168 (putative disease resistance protein RGA4 OS=Momordica charantia OX=3673 GN=LOC111016078 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 1.0e-25
Identity = 69/103 (66.99%), Postives = 85/103 (82.52%), Query Frame = 0 

Query: 24  MAEGILFTVAGEILMKLSSQASQRLGMLIGLKDDLDKLNSNVSSIQAVLLDAEER-PTKS 83
           MAEG+LF VAGEILMKL S ASQRLGM+ G+++DL KL S VS I+ VLLDAEE   TK+
Sbjct: 1   MAEGVLFHVAGEILMKLGSIASQRLGMVRGVENDLTKLTSTVSVIKNVLLDAEEHCQTKT 60

Query: 84  -HSLKNWLEKLGEALYDADDVVDEFSGEAIRREVMTRGKNAKQ 125
            H+L++WL+KL EALYDA+DV+DE S E + REV+T+GKNAKQ
Sbjct: 61  DHTLQDWLQKLEEALYDAEDVLDELSSETLHREVVTKGKNAKQ 103

[Close]
BLAST of Tan0002403 vs. ExPASy TrEMBL
Match: A0A0A0K6I1 (Rx_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G425900 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 3.0e-25
Identity = 68/101 (67.33%), Postives = 78/101 (77.23%), Query Frame = 0 

Query: 26  EGILFTVAGEILMKLSSQASQRLGMLIGLKDDLDKLNSNVSSIQAVLLDAEERPTK--SH 85
           EGIL  V  EIL KLSS A + LGM+ GL DDL+KL SNVSSIQ+VL DAE+R  K   H
Sbjct: 4   EGILSGVGVEILKKLSSHALECLGMVCGLNDDLNKLRSNVSSIQSVLRDAEQRQIKGNDH 63

Query: 86  SLKNWLEKLGEALYDADDVVDEFSGEAIRREVMTRGKNAKQ 125
           SL +WLEKLG+  YD +DV+DE S EA+RREVMTRGKNAKQ
Sbjct: 64  SLTDWLEKLGDVFYDVEDVLDEISTEALRREVMTRGKNAKQ 104

[Close]
BLAST of Tan0002403 vs. TAIR 10
Match: AT1G53350.1 (Disease resistance protein (CC-NBS-LRR class) family )

HSP 1 Score: 48.9 bits (115), Expect = 4.0e-06
Identity = 34/118 (28.81%), Postives = 68/118 (57.63%), Query Frame = 0 

Query: 24  MAEGILFTVAGEILMKLSSQASQRLGMLIGLKDDLDKLNSNVSSIQAVLLDAEERPTKSH 83
           MAE ++ +   E L +L S+ S RL    G+ + +D L   +  +Q++L DA+ +  ++ 
Sbjct: 1   MAEAVV-SFGVEKLWELLSRESARLN---GIDEQVDGLKRQLGRLQSLLKDADAKKNETE 60

Query: 84  SLKNWLEKLGEALYDADDVVDEFSGEAIRREVMTRGKNAKQEHGEKSKIKIAIECYIL 142
            ++N+LE + + +YDADD+++ F    +  E+  RGK    E G K +++  + C+++
Sbjct: 61  RVRNFLEDVKDIVYDADDIIESF----LLNEL--RGK----EKGIKKQVR-TLACFLV 103

[Close]
BLAST of Tan0002403 vs. TAIR 10
Match: AT5G48620.1 (Disease resistance protein (CC-NBS-LRR class) family )

HSP 1 Score: 48.1 bits (113), Expect = 6.8e-06
Identity = 32/101 (31.68%), Postives = 58/101 (57.43%), Query Frame = 0 

Query: 24  MAEGILFTVAGEILMKLSSQASQRLGMLIGLKDDLDKLNSNVSSIQAVLLDAEERPTKSH 83
           MAEG + +   E L  L S+ S+RL    G+ + LD L   + S+Q++L DA+ +   S 
Sbjct: 1   MAEGFV-SFGLEKLWDLLSRESERLQ---GIDEQLDGLKRQLRSLQSLLKDADAKKHGSD 60

Query: 84  SLKNWLEKLGEALYDADDVVDEFSGEAIRREVMTRGKNAKQ 125
            ++N+LE + + ++DA+D+++ +    +R E    GK  K+
Sbjct: 61  RVRNFLEDVKDLVFDAEDIIESYVLNKLRGE----GKGVKK 93

[Close]
BLAST of Tan0002403 vs. TAIR 10
Match: AT3G46730.1 (NB-ARC domain-containing disease resistance protein )

HSP 1 Score: 47.0 bits (110), Expect = 1.5e-05
Identity = 23/75 (30.67%), Postives = 40/75 (53.33%), Query Frame = 0 

Query: 32  VAGEILMKLSSQASQRLGMLIGLKDDLDKLNSNVSSIQAVLLDAEERPTKSHSLKNWLEK 91
           V G +L K+       +  L+G+KDDL++L + ++ I   L D E R  +    K W + 
Sbjct: 5   VTGFVLNKIGGYLINEVLALMGVKDDLEELKTELTCIHGYLKDVEAREREDEVSKEWTKL 64

Query: 92  LGEALYDADDVVDEF 107
           + +  YD +DV+D +
Sbjct: 65  VLDIAYDIEDVLDTY 79

[Close]
BLAST of Tan0002403 vs. TAIR 10
Match: AT3G14470.1 (NB-ARC domain-containing disease resistance protein )

HSP 1 Score: 45.8 bits (107), Expect = 3.4e-05
Identity = 19/58 (32.76%), Postives = 40/58 (68.97%), Query Frame = 0 

Query: 58  LDKLNSNVSSIQAVLLDAEERPTKSHSLKNWLEKLGEALYDADDVVDEFSGEAIRREV 116
           L++L++ + +I AVL+DAEE+   +  ++ W+ +L + +Y A+D +D+ + EA+R  +
Sbjct: 39  LERLSTALLTITAVLIDAEEKQITNPVVEKWVNELRDVVYHAEDALDDIATEALRLNI 96

[Close]
BLAST of Tan0002403 vs. TAIR 10
Match: AT5G35450.1 (Disease resistance protein (CC-NBS-LRR class) family )

HSP 1 Score: 45.1 bits (105), Expect = 5.7e-05
Identity = 28/100 (28.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 24  MAEGILFTVAGEILMKLSSQASQRLGMLIGLKDDLDKLNSNVSSIQAVLLDAEERPTKSH 83
           MAEG++ +   + L  L ++ S+RL    G+ + +D L   +  +Q++L DA+ +   S 
Sbjct: 1   MAEGVV-SFGVQKLWALLNRESERLN---GIDEQVDGLKRQLRGLQSLLKDADAKKHGSD 60

Query: 84  SLKNWLEKLGEALYDADDVVDEFSGEAIRREVMTRGKNAK 124
            ++N+LE + + ++DA+D+++ +    +R E    GK  K
Sbjct: 61  RVRNFLEDVKDLVFDAEDIIESYVLNKLRGE----GKGVK 92

The following BLAST results are available for this feature:
BLAST of Tan0002403 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q7XA392.0e-1041.77Putative disease resistance protein RGA4 OS=Solanum bulbocastanum OX=147425 GN=R... [more]
Q7XA427.6e-1041.56Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=R... [more]
Q7XBQ97.6e-1041.56Disease resistance protein RGA2 OS=Solanum bulbocastanum OX=147425 GN=RGA2 PE=1 ... [more]
Q7XA402.9e-0936.08Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=R... [more]
P0C8S15.6e-0528.81Probable disease resistance RPP8-like protein 2 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of Tan0002403 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022155938.12.8e-3075.25putative disease resistance protein RGA4 [Momordica charantia][more]
XP_038897566.13.7e-3073.27putative disease resistance protein RGA4 [Benincasa hispida][more]
XP_031745107.14.1e-2974.51putative disease resistance protein RGA4 [Cucumis sativus][more]
KAE8646395.14.1e-2974.51hypothetical protein Csa_016171 [Cucumis sativus][more]
XP_038896095.12.3e-2770.30putative disease resistance protein RGA4 [Benincasa hispida][more]
BLAST of Tan0002403 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DP921.4e-3075.25putative disease resistance protein RGA4 OS=Momordica charantia OX=3673 GN=LOC11... [more]
A0A0A0K6032.0e-2974.51Rx_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G426510 PE=4 S... [more]
A0A6J1GPK93.5e-2666.34putative disease resistance protein RGA4 OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1D1681.0e-2566.99putative disease resistance protein RGA4 OS=Momordica charantia OX=3673 GN=LOC11... [more]
A0A0A0K6I13.0e-2567.33Rx_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G425900 PE=4 S... [more]
BLAST of Tan0002403 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G53350.14.0e-0628.81Disease resistance protein (CC-NBS-LRR class) family [more]
AT5G48620.16.8e-0631.68Disease resistance protein (CC-NBS-LRR class) family [more]
AT3G46730.11.5e-0530.67NB-ARC domain-containing disease resistance protein [more]
AT3G14470.13.4e-0532.76NB-ARC domain-containing disease resistance protein [more]
AT5G35450.15.7e-0528.00Disease resistance protein (CC-NBS-LRR class) family [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 58..78
NoneNo IPR availableGENE3D1.20.5.4130coord: 34..138
e-value: 5.7E-20
score: 73.4
IPR041118Rx, N-terminalPFAMPF18052Rx_Ncoord: 35..120
e-value: 2.5E-22
score: 78.9
IPR038005Virus X resistance protein-like, coiled-coil domainCDDcd14798RX-CC_likecoord: 37..137
e-value: 4.56684E-10
score: 51.8539

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0002403.1Tan0002403.1mRNA
Tan0002403.2Tan0002403.2mRNA
Tan0002403.3Tan0002403.3mRNA
Tan0002403.4Tan0002403.4mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response
molecular_function GO:0043531 ADP binding