Tan0002387 (gene) Snake gourd v1

Overview
NameTan0002387
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Description60S ribosomal protein L34
LocationLG11: 4417977 .. 4419718 (-)
RNA-Seq ExpressionTan0002387
SyntenyTan0002387
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTTATCCAACTCCCTCCGCCAATCTGCAGCCCCCCTTGCCGCGATTTCTCTCAGAGACGCATCGAACTTAAGGTTAATCGAAGATGGTGCAGCGACTTACTTACCGTAAGCGCCACAGCTACGCCACCAAATCCAATCAGCACCGTGTCGTCAAGACCCCTGGTACTTTTTCTTCCTCTGTTATTCATCTCTTCAGTATAATCCCAGCTCTTATTTGCCGCTTCCCCGTTCAATTTCACTCACATTCTGTAGTGCCCTTCTCCAAATTTTAGTGTTGGTCGCATAATGTTTGTCATGTTGCTGTGTTTTAGGTGGAAAGTTGATCTACCAAAGCACTAAGAAGAGGGCCAGCGGTCCCAAATGTCCTGTTACCGGGAAGAGAATCCAAGGGGTACGTTAGATTTTATGCGTTTGATCAATAGGGTGTTGTTTACGTCTAATTCATATTTATAGCTTGATTTAAAGGCATGTGGATATGGAAATAGTCATTGTTCTCGAAGCTAATATGTGGGCACTCTCATGTTCTGATAGAGATGTGTTTTTTCTTTTGGCAATAGCTTGAGAAGTAGAAGTAGAGTGGTTCAAAGGTGTCCATAGCGGTCATTTATATTTTGTTTAGTTTCTGATTTGATCCAGGATGTATGAAGTTGTTGACAAAAAGCATTTTTAATACACGTTTTTTTATCTATATTCGTAAGGACGTCTGATTTCTCCACCTTTTTCTACCATTTCAAAACTTTGGGGTTTGTTGCCTAATGTGGAATTGATACACAATTTAGATGATTCTTTTTATTGTCAAGTATTTAAGCTTAGCTTTTGCTGACAAATAGAGGACATGGAAATCAGTTTTGTGTACACCCTTAGTCTCTAGGACGTATATTTGCGAGGTTGTATCGGTTGGCATCATTTTGATGATCAATTAGGAGACTCTCTCTCTTTCTTATAGCTGAAGCTTGAAAGTAAATTTATATGGATTGTCTTAATTTAAACTTTTTTTGTTGGTGTTACAGATTCCGCACTTGAGGCCTGCTGAATACAAGAGGTCTAGACTGGCTAGGAACCGTAGAACTGTAAATCGGGCATATGGTGGTGTACTGTCAGGCGGTGCTGTCAGGGAGAGGTAGGAGCTCCTCATTGAATTAACCCTGATATTTTTGGTTTCTTTCGTTTTTCTACTGTAACCAAAGCTTAAGGAGTATTTGAACACTGCAGGATTATTCGAGCTTTTCTGGTAGAAGAGCAGAAGATTGTGAAAAAGGTATTGAAAATTCAAAAAGCAAAGGAAAAGTTAGCCGCTAAGAGTTAAATGAGTAGGTGAAAAGGATGAGAAATGCATGGAAACTTTTCTGTGGTCTAAGGAGTATTTTGCCTTGAATTTTCGAAATTTTAGTGTTGATAGTGACTAGGTGTTTCTGCTTTTGCTGAATTGGATCGCCACATTTTGATTCTTCATTTTGTTGACAAATCAATCCGTCAGGTCTTGTTTGGCTATATTATGTATCTACTATGAGAATTGGGATGTTATTTTTTAACTCCCTTCTAAAGATTTTTGTAGTATGTTGCTGAATCTTATACGAACTTTCTTCTTGATTTGGCATCAGAATGGAATTTCTCCGATTAGATTGAGTTTAATTTTATTGTTCGATGTGGTTCACCCTATGGATTATGTTGTGCCCATGTTCATTATGTTGAATTTTTTGGAGATTTTGAAAATGTATTTTAACTAGATTTTTTCCCCTG

mRNA sequence

TATTTATCCAACTCCCTCCGCCAATCTGCAGCCCCCCTTGCCGCGATTTCTCTCAGAGACGCATCGAACTTAAGGTTAATCGAAGATGGTGCAGCGACTTACTTACCGTAAGCGCCACAGCTACGCCACCAAATCCAATCAGCACCGTGTCGTCAAGACCCCTGGTGGAAAGTTGATCTACCAAAGCACTAAGAAGAGGGCCAGCGGTCCCAAATGTCCTGTTACCGGGAAGAGAATCCAAGGGATTCCGCACTTGAGGCCTGCTGAATACAAGAGGTCTAGACTGGCTAGGAACCGTAGAACTGTAAATCGGGCATATGGTGGTGTACTGTCAGGCGGTGCTGTCAGGGAGAGGATTATTCGAGCTTTTCTGGTAGAAGAGCAGAAGATTGTGAAAAAGGTATTGAAAATTCAAAAAGCAAAGGAAAAGTTAGCCGCTAAGAGTTAAATGAGTAGGTGAAAAGGATGAGAAATGCATGGAAACTTTTCTGTGGTCTAAGGAGTATTTTGCCTTGAATTTTCGAAATTTTAGTGTTGATAGTGACTAGGTGTTTCTGCTTTTGCTGAATTGGATCGCCACATTTTGATTCTTCATTTTGTTGACAAATCAATCCGTCAGGTCTTGTTTGGCTATATTATGTATCTACTATGAGAATTGGGATGTTATTTTTTAACTCCCTTCTAAAGATTTTTGTAGTATGTTGCTGAATCTTATACGAACTTTCTTCTTGATTTGGCATCAGAATGGAATTTCTCCGATTAGATTGAGTTTAATTTTATTGTTCGATGTGGTTCACCCTATGGATTATGTTGTGCCCATGTTCATTATGTTGAATTTTTTGGAGATTTTGAAAATGTATTTTAACTAGATTTTTTCCCCTG

Coding sequence (CDS)

ATGGTGCAGCGACTTACTTACCGTAAGCGCCACAGCTACGCCACCAAATCCAATCAGCACCGTGTCGTCAAGACCCCTGGTGGAAAGTTGATCTACCAAAGCACTAAGAAGAGGGCCAGCGGTCCCAAATGTCCTGTTACCGGGAAGAGAATCCAAGGGATTCCGCACTTGAGGCCTGCTGAATACAAGAGGTCTAGACTGGCTAGGAACCGTAGAACTGTAAATCGGGCATATGGTGGTGTACTGTCAGGCGGTGCTGTCAGGGAGAGGATTATTCGAGCTTTTCTGGTAGAAGAGCAGAAGATTGTGAAAAAGGTATTGAAAATTCAAAAAGCAAAGGAAAAGTTAGCCGCTAAGAGTTAA

Protein sequence

MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS
Homology
[Close]
BLAST of Tan0002387 vs. ExPASy Swiss-Prot
Match: P41098 (60S ribosomal protein L34 OS=Nicotiana tabacum OX=4097 GN=RPL34 PE=2 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.8e-57
Identity = 117/120 (97.50%), Postives = 118/120 (98.33%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120

[Close]
BLAST of Tan0002387 vs. ExPASy Swiss-Prot
Match: P40590 (60S ribosomal protein L34 OS=Pisum sativum OX=3888 GN=RPL34 PE=2 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 7.5e-56
Identity = 112/120 (93.33%), Postives = 117/120 (97.50%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYR+RHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQK KEK AAK+
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQAAKN 120

[Close]
BLAST of Tan0002387 vs. ExPASy Swiss-Prot
Match: Q42351 (60S ribosomal protein L34-1 OS=Arabidopsis thaliana OX=3702 GN=RPL34A PE=2 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.4e-54
Identity = 108/120 (90.00%), Postives = 116/120 (96.67%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRP+
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K+
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPKA 120

[Close]
BLAST of Tan0002387 vs. ExPASy Swiss-Prot
Match: Q9FE65 (60S ribosomal protein L34-2 OS=Arabidopsis thaliana OX=3702 GN=RPL34B PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.6e-53
Identity = 108/119 (90.76%), Postives = 113/119 (94.96%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKL YQ+TKKRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAK 120
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPK 119

[Close]
BLAST of Tan0002387 vs. ExPASy Swiss-Prot
Match: Q9LJW6 (60S ribosomal protein L34-3 OS=Arabidopsis thaliana OX=3702 GN=RPL34C PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 4.6e-53
Identity = 108/120 (90.00%), Postives = 112/120 (93.33%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKL YQ+T KRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120
           EYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQKIVKKVLK+QKAKEK A KS
Sbjct: 61  EYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAFLVEEQKIVKKVLKLQKAKEKTAPKS 120

[Close]
BLAST of Tan0002387 vs. NCBI nr
Match: PIN24078.1 (60s ribosomal protein L34 [Handroanthus impetiginosus])

HSP 1 Score: 226.5 bits (576), Expect = 1.2e-55
Identity = 118/120 (98.33%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQSTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120

[Close]
BLAST of Tan0002387 vs. NCBI nr
Match: XP_038893923.1 (60S ribosomal protein L34-like [Benincasa hispida])

HSP 1 Score: 226.5 bits (576), Expect = 1.2e-55
Identity = 118/120 (98.33%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120
           EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120

[Close]
BLAST of Tan0002387 vs. NCBI nr
Match: XP_004138175.3 (60S ribosomal protein L34 [Cucumis sativus] >XP_022152880.1 60S ribosomal protein L34 [Momordica charantia] >XP_022922091.1 60S ribosomal protein L34-like [Cucurbita moschata] >XP_022933946.1 60S ribosomal protein L34-like [Cucurbita moschata] >XP_022933947.1 60S ribosomal protein L34-like [Cucurbita moschata] >XP_022964734.1 60S ribosomal protein L34-like [Cucurbita moschata] >XP_022964735.1 60S ribosomal protein L34-like [Cucurbita moschata] >XP_022969674.1 60S ribosomal protein L34-like [Cucurbita maxima] >XP_022970352.1 60S ribosomal protein L34-like [Cucurbita maxima] >XP_022973066.1 60S ribosomal protein L34-like [Cucurbita maxima] >XP_022973072.1 60S ribosomal protein L34-like [Cucurbita maxima] >XP_023515397.1 60S ribosomal protein L34-like [Cucurbita pepo subsp. pepo] >XP_023519212.1 60S ribosomal protein L34-like [Cucurbita pepo subsp. pepo] >XP_023520847.1 60S ribosomal protein L34-like [Cucurbita pepo subsp. pepo] >XP_023529309.1 60S ribosomal protein L34-like [Cucurbita pepo subsp. pepo] >XP_023529311.1 60S ribosomal protein L34-like [Cucurbita pepo subsp. pepo] >XP_038878407.1 60S ribosomal protein L34-like [Benincasa hispida] >KAG6586008.1 60S ribosomal protein L34, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019300.1 60S ribosomal protein L34 [Cucurbita argyrosperma subsp. argyrosperma] >KAG6587535.1 60S ribosomal protein L34, partial [Cucurbita argyrosperma subsp. sororia] >KAG6589504.1 60S ribosomal protein L34, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021512.1 60S ribosomal protein L34 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 225.3 bits (573), Expect = 2.8e-55
Identity = 117/120 (97.50%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120
           EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLA+KS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of Tan0002387 vs. NCBI nr
Match: KAG6583599.1 (Crooked neck-like protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 225.3 bits (573), Expect = 2.8e-55
Identity = 117/120 (97.50%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 745 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 804

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120
           EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLA+KS
Sbjct: 805 EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 864

[Close]
BLAST of Tan0002387 vs. NCBI nr
Match: XP_016578358.1 (PREDICTED: 60S ribosomal protein L34 [Capsicum annuum] >PHT46229.1 hypothetical protein CQW23_15387 [Capsicum baccatum] >PHT97967.1 60S ribosomal protein L34 [Capsicum chinense] >KAF3615566.1 60S ribosomal protein L34 [Capsicum annuum] >KAF3669466.1 60S ribosomal protein L34 [Capsicum annuum] >PHT79658.1 60S ribosomal protein L34 [Capsicum annuum])

HSP 1 Score: 225.3 bits (573), Expect = 2.8e-55
Identity = 117/120 (97.50%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQ+TKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERI+RAFLVEEQKIVKKVLKIQKAKEKLAAKS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIVRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120

[Close]
BLAST of Tan0002387 vs. ExPASy TrEMBL
Match: A0A2G9I2U4 (60s ribosomal protein L34 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_03199 PE=3 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.0e-56
Identity = 118/120 (98.33%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQSTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120

[Close]
BLAST of Tan0002387 vs. ExPASy TrEMBL
Match: A0A6J1I6I6 (60S ribosomal protein L34-like OS=Cucurbita maxima OX=3661 GN=LOC111471563 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.3e-55
Identity = 117/120 (97.50%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120
           EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLA+KS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of Tan0002387 vs. ExPASy TrEMBL
Match: A0A2G9HI44 (60s ribosomal protein L34 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10179 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.3e-55
Identity = 117/120 (97.50%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQSTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLA+KS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of Tan0002387 vs. ExPASy TrEMBL
Match: A0A6J1HLN7 (60S ribosomal protein L34-like OS=Cucurbita moschata OX=3662 GN=LOC111464723 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.3e-55
Identity = 117/120 (97.50%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120
           EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLA+KS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of Tan0002387 vs. ExPASy TrEMBL
Match: A0A2G2WM29 (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_15387 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.3e-55
Identity = 117/120 (97.50%), Postives = 120/120 (100.00%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQ+TKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERI+RAFLVEEQKIVKKVLKIQKAKEKLAAKS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIVRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120

[Close]
BLAST of Tan0002387 vs. TAIR 10
Match: AT1G26880.1 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 212.6 bits (540), Expect = 1.7e-55
Identity = 108/120 (90.00%), Postives = 116/120 (96.67%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRP+
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K+
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPKA 120

[Close]
BLAST of Tan0002387 vs. TAIR 10
Match: AT1G69620.1 (ribosomal protein L34 )

HSP 1 Score: 209.9 bits (533), Expect = 1.1e-54
Identity = 108/119 (90.76%), Postives = 113/119 (94.96%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKL YQ+TKKRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAK 120
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPK 119

[Close]
BLAST of Tan0002387 vs. TAIR 10
Match: AT3G28900.1 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 208.4 bits (529), Expect = 3.2e-54
Identity = 108/120 (90.00%), Postives = 112/120 (93.33%), Query Frame = 0 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKL YQ+T KRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120
           EYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQKIVKKVLK+QKAKEK A KS
Sbjct: 61  EYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAFLVEEQKIVKKVLKLQKAKEKTAPKS 120

[Close]
BLAST of Tan0002387 vs. TAIR 10
Match: AT1G26880.2 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 171.0 bits (432), Expect = 5.7e-43
Identity = 82/92 (89.13%), Postives = 88/92 (95.65%), Query Frame = 0 

Query: 1  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPA 60
          MVQRL YR RHSYATKSNQHR+VKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRP+
Sbjct: 1  MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60

Query: 61 EYKRSRLARNRRTVNRAYGGVLSGGAVRERII 93
          EYKRSRL+RNRRTVNRAYGGVLSG AVRER +
Sbjct: 61 EYKRSRLSRNRRTVNRAYGGVLSGSAVRERFV 92

The following BLAST results are available for this feature:
BLAST of Tan0002387 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P410981.8e-5797.5060S ribosomal protein L34 OS=Nicotiana tabacum OX=4097 GN=RPL34 PE=2 SV=1[more]
P405907.5e-5693.3360S ribosomal protein L34 OS=Pisum sativum OX=3888 GN=RPL34 PE=2 SV=1[more]
Q423512.4e-5490.0060S ribosomal protein L34-1 OS=Arabidopsis thaliana OX=3702 GN=RPL34A PE=2 SV=1[more]
Q9FE651.6e-5390.7660S ribosomal protein L34-2 OS=Arabidopsis thaliana OX=3702 GN=RPL34B PE=3 SV=1[more]
Q9LJW64.6e-5390.0060S ribosomal protein L34-3 OS=Arabidopsis thaliana OX=3702 GN=RPL34C PE=2 SV=1[more]
BLAST of Tan0002387 vs. NCBI nr
Match NameE-valueIdentityDescription
PIN24078.11.2e-5598.3360s ribosomal protein L34 [Handroanthus impetiginosus][more]
XP_038893923.11.2e-5598.3360S ribosomal protein L34-like [Benincasa hispida][more]
XP_004138175.32.8e-5597.5060S ribosomal protein L34 [Cucumis sativus] >XP_022152880.1 60S ribosomal protei... [more]
KAG6583599.12.8e-5597.50Crooked neck-like protein 1, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_016578358.12.8e-5597.50PREDICTED: 60S ribosomal protein L34 [Capsicum annuum] >PHT46229.1 hypothetical ... [more]
BLAST of Tan0002387 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2G9I2U46.0e-5698.3360s ribosomal protein L34 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_03199... [more]
A0A6J1I6I61.3e-5597.5060S ribosomal protein L34-like OS=Cucurbita maxima OX=3661 GN=LOC111471563 PE=3 ... [more]
A0A2G9HI441.3e-5597.5060s ribosomal protein L34 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_10179... [more]
A0A6J1HLN71.3e-5597.5060S ribosomal protein L34-like OS=Cucurbita moschata OX=3662 GN=LOC111464723 PE=... [more]
A0A2G2WM291.3e-5597.50Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_15387 PE=3 SV=1[more]
BLAST of Tan0002387 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G26880.11.7e-5590.00Ribosomal protein L34e superfamily protein [more]
AT1G69620.11.1e-5490.76ribosomal protein L34 [more]
AT3G28900.13.2e-5490.00Ribosomal protein L34e superfamily protein [more]
AT1G26880.25.7e-4389.13Ribosomal protein L34e superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008195Ribosomal protein L34AePRINTSPR01250RIBOSOMALL34coord: 13..26
score: 59.18
coord: 44..54
score: 50.0
coord: 26..43
score: 50.0
coord: 66..88
score: 44.72
IPR008195Ribosomal protein L34AePFAMPF01199Ribosomal_L34ecoord: 1..96
e-value: 6.5E-38
score: 128.9
IPR008195Ribosomal protein L34AePANTHERPTHR1075960S RIBOSOMAL PROTEIN L34coord: 1..120
NoneNo IPR availableGENE3D6.20.370.70coord: 1..37
e-value: 1.1E-21
score: 78.3
NoneNo IPR availableGENE3D6.20.340.10coord: 39..120
e-value: 2.6E-36
score: 125.4
NoneNo IPR availablePANTHERPTHR10759:SF14SUBFAMILY NOT NAMEDcoord: 1..120
IPR018065Ribosomal protein L34e, conserved sitePROSITEPS01145RIBOSOMAL_L34Ecoord: 15..28

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0002387.1Tan0002387.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome