Tan0002346 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAACAGAGAGAACGAAAAAAGAAAAAGAGAAAGGGGAAAGAATATGTTCGTTATTACGATTACAGTGTATGCACAGAAACTAGAGGATAGCGAAAGAAAAAAAAAAAAGAATCAATATCGGCTCCGGTTAGTTCTCTTTCCGTTCCATTTCATACTTCAATTTATCATCCTGATTTTGATTTTTAACAACCCCTGCTACTTCTTATCTTGACTGTTCTCTAATTTTGAACTTTAGGGTTCTTTCCCATCGGTAATGTGATGAATTTTGTCGATTTTCAATGTTTGATTAGACCCCTTTTTCGGTGCGATTGTGGTAATGGAATTCAGTCTTTTGTTTGATTTTTTTCAGGCATCGTTGATATTTGTTGTGGGTCTTTTGTCGGCTGTAATCATCTTTGAAGTTTAGACGCGTTTGATCACTCAATTTGTTCATGACTTCAAGGTACCTGATTTTGGTTTGAGAGCCCTTTAAAAAAAAAAAAAATCTTCATATTTTCTTGCGAAATGGTTTTTTCTTGTTGGAGCAAAGAAATTAGTGAAACGTTGCGATCTAGATTTTTTAAAATGAGCTGGTTGTGATATTATTCTCATTTGAGGTGTATCTGCTATGACTCTTTTTATACTTTGTGCTTTTGATTGCTTAGAAATTCCCATATGTGGTGGTTTATATTCGCTTGGATCACTGGAATTTGGATGTTAGAGCTGGGGTTTGAATGAATGACAATATACAACATTTTCTTTATGAGAGAGGCAGGTTAATAGAAGAAGAAGCTCTAATTTTCTGAACAAAATCCCTTCACCCAAGTAAAGTTTTGCCATAGATTTTTTTGTTTTGGATCACGATCACTTAGTATTTGAGTGTGATGACTTTGCTTAAAAGATCATAGAATACATGAACATCTATGCTATCAGATTCTCTGCAGGAGTTTGAATGGATGGTCCAAGTTTATGCTTATGCTTAGTTAGTTAGCTTAGTACTTAAAATCAAAGATTACTTCTGGAGTTTCTTATGTGCTGGTGGCTTCTCGGTATCGGTAGATGTGGATACCATTTGTTGATATTGGGTGAGTACATCTTTCAATTATGGTTTCTTAATCCGATGTCTAATTTAGCCTTTGAGGGTGGTTTAGTAAGAGGAGATATTTCCCTCTTCATTTTTACTGTCATTTGGTATCGGTCTGAAATTCTCAATGAGGGTTCTACTACTATTGGAAAAGTGGACTCTCAGTCTCTGCACCCTGGAGTTGAAATAGAATTTTTCGCTCCCTGTTAGGTAAATTCAAATGAACAAAGACAATTGATAGGAATGGTATTAGGGTGGTTATGAATATTATTAGAGTATTAAGGGTATATTAGTTATTAGGAGTCGATAATAAATAGAGTGAATGGAGGGGAGAAAGTTTGGGAATTGTTTAGATGGTTTTGGCTGAGTGTGTATACTCAAGAGAGGGGAGGTTCCAAACTTCCAAGTATCTCAAATACTTGGGTTATATTGTAGTTCTCCTATCTTCTATATTTCAATATTATTCTAGTTCAGTGGATTCTATCAACATCGAATCTACCTTACCATGCCTGGTTATAGTTTTCTCTCTTCCATATTGTTCTCTACTTCTTCATCTGATAAGAAACTTTATCATCTTCTTTGTCCTTATTATCCTCTATCTTCTGCTTTATATTTCTTCCATCAGTTTAAATCCTTTGTTCATAAGTTCATTTTTGTTTTTTTGTTTTTTTTGTTTTTGTTTTTTTGTTTTTGGTTTTTTTTTTTTTATGGTTTACCGGACAAGTATCCTTCATATCTTTATTTTACAAAACATTCTTTTCGGTTGAGCCTTCATATATGATCGCTACATTTCCGTTACAAATAATACATGTGTTAGCCCAATTATCCCTCTATTTCTGCTGATTTTCGCTACACTTTCCACTGTCCTATCACCCTTAGATATGCTTGCCTCCACCCCTTTTTTCCTTTACGAACTTGTAACAATTTTACCTACTTTTAACCTTGTAATCTTTATTTAGGAGCATTGATATTAGTTTGTAAAAAAGGATTGCCCACTAAATTTTTCTAAAGATCAAGTATATTAAAGTGGAGATCCTCTTTTGAATTCTTCCGTGGTTTCTCTTTTGTTTGGTCTCTCTTTCTACAATGGCTAGCAGTTGGAGAAGATCGTTTGGGAATGTCAGGTCCTTCATCGGTAATTCCATGGGCGGTCTCAGAGGCAGTGCCAATCTCGCTTCCTGGGTAGTCGCCGGAACCCTCGCCTACTTCCTCTGGGTCAAGCCCTCCCAAGACCTCAAACGCGAACAGCAGGAAAGAGCTGCTCTTGCAGCTACCGACCCTCATCGGTATATTGAGAAGAGGAAACCTATTCCTGATCCCCAGGAAACTGGTTTGATATACGGCAACAAGAATACAACTCGAAAACCGGAGGAATGAAATCTATGGAGTGTGAAAAGTTTGGAGGAATGTAACGGATTGCACTTTTCACAAATTGGAGGTGAAGGGGGTCGGTAATGTGGTTAGAAGCTAGAGCTCAGAACTGCATGATTGATTCTCTTTTAACGTTATAATGTGAAGATTAAAAGGTGATAGATGAGGAATGTGTGTAGTTCAGCAAAGAGTAGTGGCTAAATCATTTGAATCTTTTCAGTGTAACCTTCACTTGAAGGTTGAAAAAGTTTTGTATTTTGTGTTTGGTTCTGATGATGTCAATGGGATTATATACCTGGATGTATATTTCTAGTGGAGGAGGCTCCAACTTTCATGGCACATGAAGCAATAAGTTATCAAGTTTTCTAAA AAAAAAACAGAGAGAACGAAAAAAGAAAAAGAGAAAGGGGAAAGAATATGTTCGTTATTACGATTACAGTGTATGCACAGAAACTAGAGGATAGCGAAAGAAAAAAAAAAAAGAATCAATATCGGCTCCGGCATCGTTGATATTTGTTGTGGGTCTTTTGTCGGCTGTAATCATCTTTGAAGTTTAGACGCGTTTGATCACTCAATTTGTTCATGACTTCAAGCAGTTGGAGAAGATCGTTTGGGAATGTCAGGTCCTTCATCGGTAATTCCATGGGCGGTCTCAGAGGCAGTGCCAATCTCGCTTCCTGGGTAGTCGCCGGAACCCTCGCCTACTTCCTCTGGGTCAAGCCCTCCCAAGACCTCAAACGCGAACAGCAGGAAAGAGCTGCTCTTGCAGCTACCGACCCTCATCGGTATATTGAGAAGAGGAAACCTATTCCTGATCCCCAGGAAACTGGTTTGATATACGGCAACAAGAATACAACTCGAAAACCGGAGGAATGAAATCTATGGAGTGTGAAAAGTTTGGAGGAATGTAACGGATTGCACTTTTCACAAATTGGAGGTGAAGGGGGTCGGTAATGTGGTTAGAAGCTAGAGCTCAGAACTGCATGATTGATTCTCTTTTAACGTTATAATGTGAAGATTAAAAGGTGATAGATGAGGAATGTGTGTAGTTCAGCAAAGAGTAGTGGCTAAATCATTTGAATCTTTTCAGTGTAACCTTCACTTGAAGGTTGAAAAAGTTTTGTATTTTGTGTTTGGTTCTGATGATGTCAATGGGATTATATACCTGGATGTATATTTCTAGTGGAGGAGGCTCCAACTTTCATGGCACATGAAGCAATAAGTTATCAAGTTTTCTAAA ATGACTTCAAGCAGTTGGAGAAGATCGTTTGGGAATGTCAGGTCCTTCATCGGTAATTCCATGGGCGGTCTCAGAGGCAGTGCCAATCTCGCTTCCTGGGTAGTCGCCGGAACCCTCGCCTACTTCCTCTGGGTCAAGCCCTCCCAAGACCTCAAACGCGAACAGCAGGAAAGAGCTGCTCTTGCAGCTACCGACCCTCATCGGTATATTGAGAAGAGGAAACCTATTCCTGATCCCCAGGAAACTGGTTTGATATACGGCAACAAGAATACAACTCGAAAACCGGAGGAATGA MTSSSWRRSFGNVRSFIGNSMGGLRGSANLASWVVAGTLAYFLWVKPSQDLKREQQERAALAATDPHRYIEKRKPIPDPQETGLIYGNKNTTRKPEE Homology
BLAST of Tan0002346 vs. NCBI nr
Match: XP_038874523.1 (uncharacterized protein LOC120067145 isoform X1 [Benincasa hispida] >XP_038874529.1 uncharacterized protein LOC120067145 isoform X1 [Benincasa hispida]) HSP 1 Score: 192.2 bits (487), Expect = 2.1e-45 Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of Tan0002346 vs. NCBI nr
Match: XP_008451690.1 (PREDICTED: uncharacterized protein LOC103492913 isoform X2 [Cucumis melo]) HSP 1 Score: 189.5 bits (480), Expect = 1.4e-44 Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0
BLAST of Tan0002346 vs. NCBI nr
Match: XP_004137209.1 (uncharacterized protein LOC101205325 isoform X1 [Cucumis sativus]) HSP 1 Score: 188.7 bits (478), Expect = 2.3e-44 Identity = 92/97 (94.85%), Postives = 93/97 (95.88%), Query Frame = 0
BLAST of Tan0002346 vs. NCBI nr
Match: XP_038874538.1 (uncharacterized protein LOC120067145 isoform X2 [Benincasa hispida] >XP_038874547.1 uncharacterized protein LOC120067145 isoform X2 [Benincasa hispida] >XP_038874557.1 uncharacterized protein LOC120067145 isoform X2 [Benincasa hispida] >XP_038874566.1 uncharacterized protein LOC120067145 isoform X2 [Benincasa hispida] >XP_038874573.1 uncharacterized protein LOC120067145 isoform X2 [Benincasa hispida]) HSP 1 Score: 187.2 bits (474), Expect = 6.7e-44 Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 0
BLAST of Tan0002346 vs. NCBI nr
Match: XP_008451686.1 (PREDICTED: uncharacterized protein LOC103492913 isoform X1 [Cucumis melo] >XP_008451687.1 PREDICTED: uncharacterized protein LOC103492913 isoform X1 [Cucumis melo] >XP_008451688.1 PREDICTED: uncharacterized protein LOC103492913 isoform X1 [Cucumis melo] >XP_008451689.1 PREDICTED: uncharacterized protein LOC103492913 isoform X1 [Cucumis melo]) HSP 1 Score: 186.0 bits (471), Expect = 1.5e-43 Identity = 90/96 (93.75%), Postives = 93/96 (96.88%), Query Frame = 0
BLAST of Tan0002346 vs. ExPASy TrEMBL
Match: A0A1S3BT82 (uncharacterized protein LOC103492913 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492913 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 6.6e-45 Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 0
BLAST of Tan0002346 vs. ExPASy TrEMBL
Match: A0A0A0KZ01 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G089280 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 1.1e-44 Identity = 92/97 (94.85%), Postives = 93/97 (95.88%), Query Frame = 0
BLAST of Tan0002346 vs. ExPASy TrEMBL
Match: A0A1S3BS24 (uncharacterized protein LOC103492913 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492913 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 7.3e-44 Identity = 90/96 (93.75%), Postives = 93/96 (96.88%), Query Frame = 0
BLAST of Tan0002346 vs. ExPASy TrEMBL
Match: A0A6J1DP57 (uncharacterized protein LOC111022900 OS=Momordica charantia OX=3673 GN=LOC111022900 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.2e-43 Identity = 89/95 (93.68%), Postives = 92/95 (96.84%), Query Frame = 0
BLAST of Tan0002346 vs. ExPASy TrEMBL
Match: A0A1S4DYR4 (uncharacterized protein LOC103492913 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492913 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 2.1e-43 Identity = 89/95 (93.68%), Postives = 92/95 (96.84%), Query Frame = 0
BLAST of Tan0002346 vs. TAIR 10
Match: AT2G33585.1 (unknown protein; Has 31 Blast hits to 31 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 149.1 bits (375), Expect = 1.9e-36 Identity = 71/95 (74.74%), Postives = 81/95 (85.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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