Tan0002234 (gene) Snake gourd v1

Overview


Name	Tan0002234
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Small polypeptide DEVIL 16
Location	LG08: 70995415 .. 70995633 (-)
RNA-Seq Expression	Tan0002234
Synteny	Tan0002234

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGAAAGTAGCAGCTATTGCAGAAGCTTGAGTAGTAGTAATGGAAGAAGGCAAGTGGAAAATGGTGAAAATAACAATGGATTTGAAGGTGGTGATGGGTGCAAATCTTTTGGTGAAAAATGTAACAATTTGGTGAAGAAACAGAGGGCTAAATTTTATATTCTTAGAAGGTGTATTGCTATGCTTGTGTGTTGGAGAGAAAGAGGGGAATCTTGA

mRNA sequence

ATGAGAGAAAGTAGCAGCTATTGCAGAAGCTTGAGTAGTAGTAATGGAAGAAGGCAAGTGGAAAATGGTGAAAATAACAATGGATTTGAAGGTGGTGATGGGTGCAAATCTTTTGGTGAAAAATGTAACAATTTGGTGAAGAAACAGAGGGCTAAATTTTATATTCTTAGAAGGTGTATTGCTATGCTTGTGTGTTGGAGAGAAAGAGGGGAATCTTGA

Coding sequence (CDS)

ATGAGAGAAAGTAGCAGCTATTGCAGAAGCTTGAGTAGTAGTAATGGAAGAAGGCAAGTGGAAAATGGTGAAAATAACAATGGATTTGAAGGTGGTGATGGGTGCAAATCTTTTGGTGAAAAATGTAACAATTTGGTGAAGAAACAGAGGGCTAAATTTTATATTCTTAGAAGGTGTATTGCTATGCTTGTGTGTTGGAGAGAAAGAGGGGAATCTTGA

Protein sequence

MRESSSYCRSLSSSNGRRQVENGENNNGFEGGDGCKSFGEKCNNLVKKQRAKFYILRRCIAMLVCWRERGES

Homology

[Close]

BLAST of Tan0002234 vs. ExPASy Swiss-Prot
Match: Q7XXN8 (Small polypeptide DEVIL 16 OS=Arabidopsis thaliana OX=3702 GN=DVL16 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 9.9e-11
Identity = 27/35 (77.14%), Postives = 34/35 (97.14%), Query Frame = 0


Query: 35 CKSFGEKCNNLVKKQRAKFYILRRCIAMLVCWRER 70
          CK+FG+KC+++VKKQRAKFYILRRCIAMLVCW ++
Sbjct: 12 CKTFGQKCSHVVKKQRAKFYILRRCIAMLVCWHDQ 46

[Close]

BLAST of Tan0002234 vs. ExPASy Swiss-Prot
Match: Q6IM93 (Small polypeptide DEVIL 8 OS=Arabidopsis thaliana OX=3702 GN=DVL8 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 2.5e-06
Identity = 20/39 (51.28%), Postives = 27/39 (69.23%), Query Frame = 0


Query: 34 GCKSFGEKCNNLVKKQRAKFYILRRCIAMLVCWRERGES 73
          G   F  KC  LVK+QRA+FYI+RRC+ ML+CW +   +
Sbjct: 36 GKYGFTRKCGRLVKEQRARFYIMRRCVVMLICWTDHNNN 74

[Close]

BLAST of Tan0002234 vs. ExPASy Swiss-Prot
Match: Q8S8S3 (Small polypeptide DEVIL 11 OS=Arabidopsis thaliana OX=3702 GN=DVL11 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 3.3e-06
Identity = 29/67 (43.28%), Postives = 39/67 (58.21%), Query Frame = 0


Query: 2  RESSSYCRSLSSSNGRRQVENGENNNGFEGGDGCKSFGEKCNNLVKKQRAKFYILRRCIA 61
          R + S   S SS NG++Q              G  +F  KC  LVK+QRA+FYI+RRC+ 
Sbjct: 30 RITRSSSTSSSSFNGKKQ--------------GRCAFTRKCARLVKEQRARFYIMRRCVI 82

Query: 62 MLVCWRE 69
          ML+CWR+
Sbjct: 90 MLICWRD 82

[Close]

BLAST of Tan0002234 vs. ExPASy Swiss-Prot
Match: Q8L7D0 (Small polypeptide DEVIL 13 OS=Arabidopsis thaliana OX=3702 GN=DVL13 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 5.6e-06
Identity = 27/69 (39.13%), Postives = 44/69 (63.77%), Query Frame = 0


Query: 4   SSSYCRSLSSSNGRRQVENGENNNGFEGGDGCKSFGEKCNNLVKKQRAKFYILRRCIAML 63
           SSS   S+S S  R++  +  +++         S  +K ++L K+Q+A+FYI+RRC+AML
Sbjct: 55  SSSSSSSISRSFSRKERRSSSSSS--------SSITQKYSSLAKEQKARFYIMRRCVAML 114

Query: 64  VCWRERGES 73
           VCW + G+S
Sbjct: 115 VCWHKHGDS 115

[Close]

BLAST of Tan0002234 vs. ExPASy Swiss-Prot
Match: Q8LBB5 (Small polypeptide DEVIL 20 OS=Arabidopsis thaliana OX=3702 GN=DVL20 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.6e-05
Identity = 26/47 (55.32%), Postives = 33/47 (70.21%), Query Frame = 0


Query: 23 GENNNGFEGGDGCKSFGEKCNNLVKKQRAKFYILRRCIAMLVCWRER 70
          GE N+        K+F  KC+++V+KQRAKFYIL RC+AMLVC R R
Sbjct: 2  GEENSTSGTCKPSKTFKAKCSHMVRKQRAKFYILGRCLAMLVCGRGR 48

[Close]

BLAST of Tan0002234 vs. NCBI nr
Match: XP_038904423.1 (uncharacterized protein LOC120090788 [Benincasa hispida])

HSP 1 Score: 113.2 bits (282), Expect = 9.2e-22
Identity = 58/73 (79.45%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 1  MRESSSYCRSLSSS-NGRRQVENGENNNGFEGGDGCKSFGEKCNNLVKKQRAKFYILRRC 60
          M+ESSSYCR LSS+  G    +N  NNNGFEGG+ CKSFGEKCNNLVKKQR KFYILRRC
Sbjct: 2  MKESSSYCRRLSSNGGGENGNDNANNNNGFEGGE-CKSFGEKCNNLVKKQRTKFYILRRC 61

Query: 61 IAMLVCWRERGES 73
          IAMLVCWRERGES
Sbjct: 62 IAMLVCWRERGES 73

[Close]

BLAST of Tan0002234 vs. NCBI nr
Match: XP_008443575.1 (PREDICTED: uncharacterized protein LOC103487131 [Cucumis melo])

HSP 1 Score: 108.2 bits (269), Expect = 2.9e-20
Identity = 57/77 (74.03%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 1  MRESSSYCRSLSSSNGRRQVENGEN---NNGFEGGDG--CKSFGEKCNNLVKKQRAKFYI 60
          M+ESS YCR L+SS+  R  ENGEN   NNGFE  +   CKSFGEKCNNLVKKQR KFYI
Sbjct: 2  MKESSRYCRRLNSSSNGRNGENGENNKKNNGFEDDNAGECKSFGEKCNNLVKKQRTKFYI 61

Query: 61 LRRCIAMLVCWRERGES 73
          LRRCIAMLVCWR+RGES
Sbjct: 62 LRRCIAMLVCWRDRGES 78

[Close]

BLAST of Tan0002234 vs. NCBI nr
Match: XP_022983170.1 (uncharacterized protein LOC111481804 [Cucurbita maxima])

HSP 1 Score: 99.4 bits (246), Expect = 1.4e-17
Identity = 51/71 (71.83%), Postives = 53/71 (74.65%), Query Frame = 0


Query: 2  RESSSYCRSLSSSNGRRQVENGENNNGFEGGDGCKSFGEKCNNLVKKQRAKFYILRRCIA 61
          RESSS   S     G     N  N+NGFEGG GCKSFGEKC NLVKKQR KFYILRRCIA
Sbjct: 3  RESSSSSSSRRYCRGGNGDFNNNNDNGFEGGGGCKSFGEKCTNLVKKQRTKFYILRRCIA 62

Query: 62 MLVCWRERGES 73
          MLVCWR+RGES
Sbjct: 63 MLVCWRDRGES 73

[Close]

BLAST of Tan0002234 vs. NCBI nr
Match: XP_022935492.1 (uncharacterized protein LOC111442348 [Cucurbita moschata])

HSP 1 Score: 98.6 bits (244), Expect = 2.3e-17
Identity = 52/71 (73.24%), Postives = 54/71 (76.06%), Query Frame = 0


Query: 2  RESSSYCRSLSSSNGRRQVENGENNNGFEGGDGCKSFGEKCNNLVKKQRAKFYILRRCIA 61
          RESSS  R     NG     N  N+NGFEGG GCKSFGEKC NLVKKQR KFYILRRCIA
Sbjct: 3  RESSSSRRYCRGGNGD---INNNNDNGFEGGGGCKSFGEKCTNLVKKQRTKFYILRRCIA 62

Query: 62 MLVCWRERGES 73
          MLVCWR+RGES
Sbjct: 63 MLVCWRDRGES 70

[Close]

BLAST of Tan0002234 vs. NCBI nr
Match: XP_023528782.1 (uncharacterized protein LOC111791613 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 95.9 bits (237), Expect = 1.5e-16
Identity = 51/71 (71.83%), Postives = 53/71 (74.65%), Query Frame = 0


Query: 2  RESSSYCRSLSSSNGRRQVENGENNNGFEGGDGCKSFGEKCNNLVKKQRAKFYILRRCIA 61
          RESSS  R      G     N  N+NGFEGG GCKSFGEKC NLVKKQR KFYILRRCIA
Sbjct: 3  RESSSSSR--RCCRGGNGDINNNNDNGFEGGGGCKSFGEKCTNLVKKQRTKFYILRRCIA 62

Query: 62 MLVCWRERGES 73
          MLVCWR+RGES
Sbjct: 63 MLVCWRDRGES 71

[Close]

BLAST of Tan0002234 vs. ExPASy TrEMBL
Match: A0A1S3B7W9 (uncharacterized protein LOC103487131 OS=Cucumis melo OX=3656 GN=LOC103487131 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.4e-20
Identity = 57/77 (74.03%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 1  MRESSSYCRSLSSSNGRRQVENGEN---NNGFEGGDG--CKSFGEKCNNLVKKQRAKFYI 60
          M+ESS YCR L+SS+  R  ENGEN   NNGFE  +   CKSFGEKCNNLVKKQR KFYI
Sbjct: 2  MKESSRYCRRLNSSSNGRNGENGENNKKNNGFEDDNAGECKSFGEKCNNLVKKQRTKFYI 61

Query: 61 LRRCIAMLVCWRERGES 73
          LRRCIAMLVCWR+RGES
Sbjct: 62 LRRCIAMLVCWRDRGES 78

[Close]

BLAST of Tan0002234 vs. ExPASy TrEMBL
Match: A0A6J1J510 (uncharacterized protein LOC111481804 OS=Cucurbita maxima OX=3661 GN=LOC111481804 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 6.6e-18
Identity = 51/71 (71.83%), Postives = 53/71 (74.65%), Query Frame = 0


Query: 2  RESSSYCRSLSSSNGRRQVENGENNNGFEGGDGCKSFGEKCNNLVKKQRAKFYILRRCIA 61
          RESSS   S     G     N  N+NGFEGG GCKSFGEKC NLVKKQR KFYILRRCIA
Sbjct: 3  RESSSSSSSRRYCRGGNGDFNNNNDNGFEGGGGCKSFGEKCTNLVKKQRTKFYILRRCIA 62

Query: 62 MLVCWRERGES 73
          MLVCWR+RGES
Sbjct: 63 MLVCWRDRGES 73

[Close]

BLAST of Tan0002234 vs. ExPASy TrEMBL
Match: A0A6J1F5Q1 (uncharacterized protein LOC111442348 OS=Cucurbita moschata OX=3662 GN=LOC111442348 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.1e-17
Identity = 52/71 (73.24%), Postives = 54/71 (76.06%), Query Frame = 0


Query: 2  RESSSYCRSLSSSNGRRQVENGENNNGFEGGDGCKSFGEKCNNLVKKQRAKFYILRRCIA 61
          RESSS  R     NG     N  N+NGFEGG GCKSFGEKC NLVKKQR KFYILRRCIA
Sbjct: 3  RESSSSRRYCRGGNGD---INNNNDNGFEGGGGCKSFGEKCTNLVKKQRTKFYILRRCIA 62

Query: 62 MLVCWRERGES 73
          MLVCWR+RGES
Sbjct: 63 MLVCWRDRGES 70

[Close]

BLAST of Tan0002234 vs. ExPASy TrEMBL
Match: A0A3Q0EW92 (uncharacterized protein LOC106756915 OS=Vigna radiata var. radiata OX=3916 GN=LOC106756915 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.7e-11
Identity = 34/43 (79.07%), Postives = 39/43 (90.70%), Query Frame = 0


Query: 30 EGGDGCKSFGEKCNNLVKKQRAKFYILRRCIAMLVCWRERGES 73
          E  D CKSFG+KC++LVKKQRAKFYILRRCIAML+CW ERGE+
Sbjct: 23 EACDPCKSFGQKCSHLVKKQRAKFYILRRCIAMLLCWHERGET 65

[Close]

BLAST of Tan0002234 vs. ExPASy TrEMBL
Match: V7D0S6 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G178700g PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.7e-11
Identity = 33/40 (82.50%), Postives = 38/40 (95.00%), Query Frame = 0


Query: 33 DGCKSFGEKCNNLVKKQRAKFYILRRCIAMLVCWRERGES 73
          D CKSFG+KC++LVKKQRAKFYILRRCIAML+CW ERGE+
Sbjct: 53 DPCKSFGQKCSHLVKKQRAKFYILRRCIAMLLCWHERGET 92

[Close]

BLAST of Tan0002234 vs. TAIR 10
Match: AT2G36985.1 (DVL family protein )

HSP 1 Score: 67.0 bits (162), Expect = 7.0e-12
Identity = 27/35 (77.14%), Postives = 34/35 (97.14%), Query Frame = 0


Query: 35 CKSFGEKCNNLVKKQRAKFYILRRCIAMLVCWRER 70
          CK+FG+KC+++VKKQRAKFYILRRCIAMLVCW ++
Sbjct: 12 CKTFGQKCSHVVKKQRAKFYILRRCIAMLVCWHDQ 46

[Close]

BLAST of Tan0002234 vs. TAIR 10
Match: AT3G55515.1 (ROTUNDIFOLIA like 7 )

HSP 1 Score: 52.4 bits (124), Expect = 1.8e-07
Identity = 20/39 (51.28%), Postives = 27/39 (69.23%), Query Frame = 0


Query: 34 GCKSFGEKCNNLVKKQRAKFYILRRCIAMLVCWRERGES 73
          G   F  KC  LVK+QRA+FYI+RRC+ ML+CW +   +
Sbjct: 36 GKYGFTRKCGRLVKEQRARFYIMRRCVVMLICWTDHNNN 74

[Close]

BLAST of Tan0002234 vs. TAIR 10
Match: AT2G39705.1 (ROTUNDIFOLIA like 8 )

HSP 1 Score: 52.0 bits (123), Expect = 2.3e-07
Identity = 29/67 (43.28%), Postives = 39/67 (58.21%), Query Frame = 0


Query: 2  RESSSYCRSLSSSNGRRQVENGENNNGFEGGDGCKSFGEKCNNLVKKQRAKFYILRRCIA 61
          R + S   S SS NG++Q              G  +F  KC  LVK+QRA+FYI+RRC+ 
Sbjct: 30 RITRSSSTSSSSFNGKKQ--------------GRCAFTRKCARLVKEQRARFYIMRRCVI 82

Query: 62 MLVCWRE 69
          ML+CWR+
Sbjct: 90 MLICWRD 82

[Close]

BLAST of Tan0002234 vs. TAIR 10
Match: AT2G29125.1 (ROTUNDIFOLIA like 2 )

HSP 1 Score: 51.2 bits (121), Expect = 4.0e-07
Identity = 27/69 (39.13%), Postives = 44/69 (63.77%), Query Frame = 0


Query: 4   SSSYCRSLSSSNGRRQVENGENNNGFEGGDGCKSFGEKCNNLVKKQRAKFYILRRCIAML 63
           SSS   S+S S  R++  +  +++         S  +K ++L K+Q+A+FYI+RRC+AML
Sbjct: 55  SSSSSSSISRSFSRKERRSSSSSS--------SSITQKYSSLAKEQKARFYIMRRCVAML 114

Query: 64  VCWRERGES 73
           VCW + G+S
Sbjct: 115 VCWHKHGDS 115

[Close]

BLAST of Tan0002234 vs. TAIR 10
Match: AT3G53232.1 (ROTUNDIFOLIA like 1 )

HSP 1 Score: 49.7 bits (117), Expect = 1.2e-06
Identity = 26/47 (55.32%), Postives = 33/47 (70.21%), Query Frame = 0


Query: 23 GENNNGFEGGDGCKSFGEKCNNLVKKQRAKFYILRRCIAMLVCWRER 70
          GE N+        K+F  KC+++V+KQRAKFYIL RC+AMLVC R R
Sbjct: 2  GEENSTSGTCKPSKTFKAKCSHMVRKQRAKFYILGRCLAMLVCGRGR 48

The following BLAST results are available for this feature:

BLAST of Tan0002234 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XXN8	9.9e-11	77.14	Small polypeptide DEVIL 16 OS=Arabidopsis thaliana OX=3702 GN=DVL16 PE=2 SV=1	[more]
Q6IM93	2.5e-06	51.28	Small polypeptide DEVIL 8 OS=Arabidopsis thaliana OX=3702 GN=DVL8 PE=3 SV=1	[more]
Q8S8S3	3.3e-06	43.28	Small polypeptide DEVIL 11 OS=Arabidopsis thaliana OX=3702 GN=DVL11 PE=3 SV=1	[more]
Q8L7D0	5.6e-06	39.13	Small polypeptide DEVIL 13 OS=Arabidopsis thaliana OX=3702 GN=DVL13 PE=3 SV=1	[more]
Q8LBB5	1.6e-05	55.32	Small polypeptide DEVIL 20 OS=Arabidopsis thaliana OX=3702 GN=DVL20 PE=3 SV=1	[more]

BLAST of Tan0002234 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904423.1	9.2e-22	79.45	uncharacterized protein LOC120090788 [Benincasa hispida]	[more]
XP_008443575.1	2.9e-20	74.03	PREDICTED: uncharacterized protein LOC103487131 [Cucumis melo]	[more]
XP_022983170.1	1.4e-17	71.83	uncharacterized protein LOC111481804 [Cucurbita maxima]	[more]
XP_022935492.1	2.3e-17	73.24	uncharacterized protein LOC111442348 [Cucurbita moschata]	[more]
XP_023528782.1	1.5e-16	71.83	uncharacterized protein LOC111791613 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0002234 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B7W9	1.4e-20	74.03	uncharacterized protein LOC103487131 OS=Cucumis melo OX=3656 GN=LOC103487131 PE=...	[more]
A0A6J1J510	6.6e-18	71.83	uncharacterized protein LOC111481804 OS=Cucurbita maxima OX=3661 GN=LOC111481804...	[more]
A0A6J1F5Q1	1.1e-17	73.24	uncharacterized protein LOC111442348 OS=Cucurbita moschata OX=3662 GN=LOC1114423...	[more]
A0A3Q0EW92	2.7e-11	79.07	uncharacterized protein LOC106756915 OS=Vigna radiata var. radiata OX=3916 GN=LO...	[more]
V7D0S6	2.7e-11	82.50	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G178700g PE=4 ...	[more]

BLAST of Tan0002234 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36985.1	7.0e-12	77.14	DVL family protein	[more]
AT3G55515.1	1.8e-07	51.28	ROTUNDIFOLIA like 7	[more]
AT2G39705.1	2.3e-07	43.28	ROTUNDIFOLIA like 8	[more]
AT2G29125.1	4.0e-07	39.13	ROTUNDIFOLIA like 2	[more]
AT3G53232.1	1.2e-06	55.32	ROTUNDIFOLIA like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012552	DVL	PFAM	PF08137	DVL	coord: 47..65 e-value: 3.7E-11 score: 42.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR33102	DVL19-RELATED-RELATED	coord: 19..71
None	No IPR available	PANTHER	PTHR33102:SF8	DVL FAMILY PROTEIN	coord: 19..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0002234.1	Tan0002234.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008285	negative regulation of cell population proliferation
biological_process	GO:0048367	shoot system development
cellular_component	GO:0005886	plasma membrane