Tan0002207 (gene) Snake gourd v1

Overview
NameTan0002207
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRNase H domain-containing protein
LocationLG04: 14961924 .. 14966742 (+)
RNA-Seq ExpressionTan0002207
SyntenyTan0002207
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCACTTCACCGGCAGATTCTTCGAGAACAGGGAATGGAATTCAATCGGAACCGGCAGCGGTGAAGAGATCTGTGATTTCGCAGATGCTTTCTCCGATCACCATCAATTCATCCATGGACGTTTCACCATCAATGCAAATCAGCGAAAAATCAGGGGAGAAAGAGGAGCTCGTTACGAAACGTACGAACATTAAATATGCTAAGAAGCTCAATTTTGAGGGAGCTGAAATGATTGATAGAGGGTTCTCGAAAAAGCTGGAAGATAAGGGTTACATGGTTGGCAATGGGTTAGACCTTGATGGGCTCTTAATTTGCAATGTTGCGGTTAATGGAAAGGAGTTGGGTCAGTCTCTTCCAGATTCACAAAATGTGAAGGCCCAATCTAAAACTAAAGGGGTCGAGGAAAGAAATCAAACGGGGTTGGTCCATGCGGTTATTGGGCTGGCCGAAAATAAACTTGAAGGGGGCCCAGAACCTGCTTCATATGCAGGCAAGGAAGATGATTTGAAGCCCACTTCTTTCTGCAAACAAGTCCAAATACCGGCAACTCCTACACCTCCGCCAGGTAAGTGGAAAAGATTTATTCGTCCATCTTCTCCATTACCGAGCACGACTGATGTTTGTGTTAAGGGGGAAAAGCGGAAGTCTGTTTGTATTTCTGCAAGTTCCAATAAGAGGTCATTACTCCAATCCAGGTCATACGATGGTGAGGATGGAAAAAACTTATCTTTTGAGGGGGCGGTGGTTGCTGAGCAACCCCGCCAGCAATCATGAAAACTCTTTGTTGGAATGTCCGTGGGTTGGGGAACCCTAGGGCATTTCGTGTTGTTTGCGATGAATTAACTCGTTATACTCCCCATTTATGTTTTTTTGTTGGAAACTAAATGTAATCGCAATGTTCTGAATAAGTTGAAAAGCACTTTATGTTATTATGGTTGTTTTATTGTTGATAGAACAGGTCGGAGTGGGGGTCTCTGTCTGCTCTGGTCAGAGCAAATTGTAGTTTCTATTCTATCTTTTTCCCCTCATCACATTGATGCATCCATAGGATGGAATAGTAAGAGTTGGAGATTCACCGACTTTTATGGTCAACCTGACTAATCTCTTCGGAATCAGTCATGGAACTATTACGCATAATTGGTAACAATGACCCATCGCCTTGGGTTGTAGGGAGAGATGTTAATGAAATTCTTTGGGATGTCGAGAAAAGTAGAGGTGGGAACAGACAACAAGGACTGATTCAGGAGTTTCGACAAGCTATAAATGATTGATGCCTCCAAGACTTGGGTTTTCGCGGTGGTAAATTTACCTGGTGCAACAGGAGGGAGCAAAATGATCAGGTTAGTCTTCGTCTTGATCGATTTTTGGCTAACAAAGAGTTTTGCCTTTTGTTCCAGAATTGTGTTGTAAATAATCTTGACTGGGCAAAATCTGACCACCGTCTGATCCTACTAAATCTGGAAGCTCCCTATCGAAAGGTTGGAGATCTCGAAAACCGTTTCGATTCAAGAAATTTTGGGTAAGGAACCCAGAGTGCAAGAGTTTAATTGAAAAAATAAGTGAGTCAAATCAGTTGAATCAGGTGGAACCAGGGTTGCAACGATTGTTGAATTTAACAGCTAGAGTTTTGGGTCCTTGGGGCAAGAAGCAGAATGGTAGCTTAAAATCCGATATACATACATTGCGGTCTAAGTTAAAGGAAGCCTATGCACAACCATTGCCTTTAAATTTTGCTCTAATCAGATTTATAGAAAAAAAACTTGAAAGCAGATTGTTGGATGAGGAGATTTACTGGAAACAAAGATCACGAGAAAACTGGCTAAAGTAAGGAGACAGAAACACCAGATGGTTTCGCCTGAGGGCCTCAAAAAGAAAGAAAAGAAACACAATCAAGCGGATTTTGGATGGGTCGGGACAATTGCAAGAGAACCCGACTGTGGTGTCCAAGGTGTTTCTGGATTACTTCACGGGTGTCTTTGCTTCCTCCAACCCAACGACGGAGAACATTTCTAAGGTAACTAATGCAATCCCTCGGAAACTGTCAAATAATATGATTAATATTCTCTTTCAGGATTTCACTGAGGATGAAATTGTGAGGGCGGTAAAAGGATTCCATCCGACTAAGTCACCTGGTCCAGATGGGTTCTCAGCAGTTTTTTACCAGAAATACTAGGACGTAATTGGTCCTCAGACAGTGGACAGTTGTTTGAAGATTCTTAAACAGAGAGTCTCGTCGGCATGTTGGAACAAAACTACTATTGTTCTCATTCCTAAGGTGAAGGATCCTAAGGAGGTGACGGACAATCGTCTGATTAGCCTTTGTAACGTTTGTTATAAAATAGTGACAAAGGTCATCCCGAACCGAATGAAACAAATTCTGGGTGATATAATCTCTGAGGAGCAATCTGCTTTTGTCCCAGGTAGGAACATCACAGACGATCTTATTATTGCACATGAAACCTTAGGCTGGATGAACTAGATGAAAAAGGGCTCCGGGGGCTTTGCTGCAATCAAGCTGGATATGAACAAGGCTTACGATAGAGTGGAATGGGCATTCCTCCAACAAGTATTATTGCAATTGAGGTTCCCTACAAGATGGGTGGAATTGATCATGGATTGTATTTCGACGGTGTTCTTTTCTATTTCATTAAATGGGAAAGACATTGGGACTGTTAAACCGTCAAGAGGGATTCGACAGGGGGATTCGTTATCTCCATATCTGTTTTTGTTGTGTGTCGAAGGCTTATCAGCGTTACTTTCATTAGAATCAAGGGTTGGAAGACTATCCGAGGTGGCAGGTTCAAGACAAAATCCTAAGGTAACTCATTTGTTCTTTTGCGGATGATAGTCTTCTTTTCTTTAGAGCCAATGTCAATGAGTTTGGCCTACTAAAGGCCATTCTCAGTACCTATGAGTCAACATCAGGTCAGTCCATCAATATGAGAAAGTCAGCAATGGGTTCTCCCCAAATGTAGGTCCAAAGTGCAAACAGTATCTAGGTCTTATTTTGCAAATGAATACAGTTGGCAATCTTGGGTCGTATCTGGGTATTCTTTCTTCCTTTTCAAGAACTAAATGGGCAGATTGGCGCTACTTAAAGGACAAATTTTGGCAGAAGCTACAGGGTTGGAAAAGAAGTTTGTTCTCTACAGGAGCTAAAGAGGTGATGGTAAAAAGTGTAGTTATGGCCTTGCCAACATATCCTATGAGTTGTTTTAGACTCCAAAAGAAGTTGCATCATTATTTACCAGTCAGATGGCAAAGTTTTGGTGGGGTTCCTCGACAGAGAACAGGAAAATACACTGGATGGGGTGAGAGAGATTATGTAAACGTAAGGAATTGGGAGGTCTAAATTTTCGTGATCTGATGGGGGTAAATAAAGTTATTTTAGCCAAACAGACTTTGAGAGTGTTTATGAACCCTTGCTTATTGGTGTCTAAAGTTTTGAAAGGTAGATACTTTCCCAATTCTGATCTTCTCAGTATATCATCTTCCCCTGCCTCAGGATCATATTTCTGGAAGAGTTTTGTCTGGGGCATGGATTTACGCAAGAAAGGTATGCGTCTGCAGGTTGGGAATGAGGAATCCATCAGGATTTGCAAAGACCCCTGGTTACTAAGGTTATGGTCTTTTAAGTCGATCTAGTGTCTTACTGACCCAGGGGGAGATGTATGTCTCTGAGTTCATCACACCAGATAAACATTGGGATATCAACAGGTTGGAGCATTACATTGAGAAGGAGGAGGTACAGGAAATTGTAAGGCAACCGATATCTTTATCTAGATGTGCAGATAGGTGGGTATGGCATTTTGATAAGGTGGGTCGTTATCAAGTCAAGAGTGGCTACAAGTTGTGTATGCTGAACCCCGAGAGACCATCCTCATCTCTTGAGGAGGGGGACAAGAAATGTTGGAAAGGACTATGGGGATTAAATTTACCGACGAAGGTAAAATTGTTTGTATGGCGTTCCTTTCATGGTTGCCTGCCTACGTGAGTCAACATGATAGATCTCTCTTGTAGTTGTCCTATATGTGGTCGGATGCCAGAGAAGATGAAACATATACTTTTTTGGTGCCCCAGAGCACAAGATTTGTGGAATGTCTTGATTAAGAGGGTTGAGGTTGGATTAGATAGAAGATGGTCGATACAAGATATTTGGTTGGAGTTGTTCAAGCACAATGACAGTGAACTGATGTGTGTTGGTGCAAGGGGTATCTGGAATGATCATAACAATTGGTGTTTTAGCCATCATTTGTCTCTGGTTTCTGATAGAGCGGAGTGGGTATTACATTATCTGCAGGAATTCCAATCTTCAAATATATCATCGAAGCCCAAATCCGAGAGTGGTGTCGCTAGGTCGAGTACAGTCCCTTCCTGTATTAACATTTTTGTGGATGCAGCTTGTAATGAACAGGATGGAAAGACAGGCGTGGGAGTGGCTATTTGTGTTAATGATGGGAGTTGTTTGGTGGCCATGGCCAACAAATATGATTGTTACTTAAATTCGACATGCTTCGAAGAAGTGGCTTTGTATGATGGGTTGAAATTGGCTTCCCGTCTGGATTTCTCTCAAGTTCACTTCTTTTCAGATTCGTTGTCCTTAGTAGCAATGGTGAATGGAGTCCAGGAGCCTACTACGGATATCAAAAATTATATCGAAGATATTCATTTGCTTTGGCAACATTTTAGGGTGAATCATTTGAGCCATACTAGTAGATCTTTTAATTCTTTAGCACATGTATTAGCAAGGAAGGGTTTGGGGGGTTGTACAGAGCTTTGGAATGACAATTTTCTTGATTGGATCCGAAATCTTTAA

mRNA sequence

ATGGCCACTTCACCGGCAGATTCTTCGAGAACAGGGAATGGAATTCAATCGGAACCGGCAGCGGTGAAGAGATCTGTGATTTCGCAGATGCTTTCTCCGATCACCATCAATTCATCCATGGACGTTTCACCATCAATGCAAATCAGCGAAAAATCAGGGGAGAAAGAGGAGCTCGTTACGAAACGTACGAACATTAAATATGCTAAGAAGCTCAATTTTGAGGGAGCTGAAATGATTGATAGAGGGTTCTCGAAAAAGCTGGAAGATAAGGGTTACATGGTTGGCAATGGGTTAGACCTTGATGGGCTCTTAATTTGCAATGTTGCGGTTAATGGAAAGGAGTTGGGTCAGTCTCTTCCAGATTCACAAAATGTGAAGGCCCAATCTAAAACTAAAGGGGTCGAGGAAAGAAATCAAACGGGGTTGGTCCATGCGGTTATTGGGCTGGCCGAAAATAAACTTGAAGGGGGCCCAGAACCTGCTTCATATGCAGGCAAGGAAGATGATTTGAAGCCCACTTCTTTCTGCAAACAAGTCCAAATACCGGCAACTCCTACACCTCCGCCAGCTTGTAATGAACAGGATGGAAAGACAGGCGTGGGAGTGGCTATTTGTGTTAATGATGGGAGTTGTTTGGTGGCCATGGCCAACAAATATGATTGTTACTTAAATTCGACATGCTTCGAAGAAGTGGCTTTGTATGATGGGTTGAAATTGGCTTCCCGTCTGGATTTCTCTCAAGTTCACTTCTTTTCAGATTCGTTGTCCTTAGTAGCAATGGTGAATGGAGTCCAGGAGCCTACTACGGATATCAAAAATTATATCGAAGATATTCATTTGCTTTGGCAACATTTTAGGGTGAATCATTTGAGCCATACTAGTAGATCTTTTAATTCTTTAGCACATGTATTAGCAAGGAAGGGTTTGGGGGGTTGTACAGAGCTTTGGAATGACAATTTTCTTGATTGGATCCGAAATCTTTAA

Coding sequence (CDS)

ATGGCCACTTCACCGGCAGATTCTTCGAGAACAGGGAATGGAATTCAATCGGAACCGGCAGCGGTGAAGAGATCTGTGATTTCGCAGATGCTTTCTCCGATCACCATCAATTCATCCATGGACGTTTCACCATCAATGCAAATCAGCGAAAAATCAGGGGAGAAAGAGGAGCTCGTTACGAAACGTACGAACATTAAATATGCTAAGAAGCTCAATTTTGAGGGAGCTGAAATGATTGATAGAGGGTTCTCGAAAAAGCTGGAAGATAAGGGTTACATGGTTGGCAATGGGTTAGACCTTGATGGGCTCTTAATTTGCAATGTTGCGGTTAATGGAAAGGAGTTGGGTCAGTCTCTTCCAGATTCACAAAATGTGAAGGCCCAATCTAAAACTAAAGGGGTCGAGGAAAGAAATCAAACGGGGTTGGTCCATGCGGTTATTGGGCTGGCCGAAAATAAACTTGAAGGGGGCCCAGAACCTGCTTCATATGCAGGCAAGGAAGATGATTTGAAGCCCACTTCTTTCTGCAAACAAGTCCAAATACCGGCAACTCCTACACCTCCGCCAGCTTGTAATGAACAGGATGGAAAGACAGGCGTGGGAGTGGCTATTTGTGTTAATGATGGGAGTTGTTTGGTGGCCATGGCCAACAAATATGATTGTTACTTAAATTCGACATGCTTCGAAGAAGTGGCTTTGTATGATGGGTTGAAATTGGCTTCCCGTCTGGATTTCTCTCAAGTTCACTTCTTTTCAGATTCGTTGTCCTTAGTAGCAATGGTGAATGGAGTCCAGGAGCCTACTACGGATATCAAAAATTATATCGAAGATATTCATTTGCTTTGGCAACATTTTAGGGTGAATCATTTGAGCCATACTAGTAGATCTTTTAATTCTTTAGCACATGTATTAGCAAGGAAGGGTTTGGGGGGTTGTACAGAGCTTTGGAATGACAATTTTCTTGATTGGATCCGAAATCTTTAA

Protein sequence

MATSPADSSRTGNGIQSEPAAVKRSVISQMLSPITINSSMDVSPSMQISEKSGEKEELVTKRTNIKYAKKLNFEGAEMIDRGFSKKLEDKGYMVGNGLDLDGLLICNVAVNGKELGQSLPDSQNVKAQSKTKGVEERNQTGLVHAVIGLAENKLEGGPEPASYAGKEDDLKPTSFCKQVQIPATPTPPPACNEQDGKTGVGVAICVNDGSCLVAMANKYDCYLNSTCFEEVALYDGLKLASRLDFSQVHFFSDSLSLVAMVNGVQEPTTDIKNYIEDIHLLWQHFRVNHLSHTSRSFNSLAHVLARKGLGGCTELWNDNFLDWIRNL
Homology
[Close]
BLAST of Tan0002207 vs. NCBI nr
Match: XP_030969974.1 (uncharacterized protein LOC115990267 [Quercus lobata])

HSP 1 Score: 71.2 bits (173), Expect = 1.8e-08
Identity = 39/117 (33.33%), Postives = 59/117 (50.43%), Query Frame = 0 

Query: 193 EQDGKTGVGVAICVNDGSCLVAMANKYDCYLNSTCFEEVALYDGLKLASRLDFSQVHFFS 252
           ++  K G+GV +  + G  L A+  K D   ++   E +A+   ++ A    F+ V   S
Sbjct: 30  KESNKAGIGVVVRDSQGWVLAALTEKVDGVQDAEVIEALAIRRAIRFAIETSFNCVIIES 89

Query: 253 DSLSLVAMVNGVQEPTTDIKNYIEDIHLLWQHFRVNHLSHTSRSFNSLAHVLARKGL 310
           DSLS+V  +    EPT  I N IED+ LL +  +     HT R  N +AH LAR  +
Sbjct: 90  DSLSVVKAIQDTAEPTCHIGNIIEDVKLLSKTMKSCEFHHTKREANQVAHTLARNAI 146

[Close]
BLAST of Tan0002207 vs. NCBI nr
Match: XP_022154440.1 (uncharacterized protein LOC111021711 [Momordica charantia])

HSP 1 Score: 66.2 bits (160), Expect = 5.8e-07
Identity = 45/157 (28.66%), Postives = 75/157 (47.77%), Query Frame = 0 

Query: 177 KQVQIPATPTP-------PPACNEQDGKTGVGVAICVND-GSCLVAMANKYDCYLNSTCF 236
           K V   A P+P         AC   + +TG+GV +C ND G  +VAM  K D +      
Sbjct: 123 KDVNYWAPPSPDWVKINVDTACKLSNSRTGIGV-VCQNDKGEIIVAMIRKLDVFYEPLQV 182

Query: 237 EEVALYDGLKLASRLDFSQVHFFSDSLSLVAMVNGVQEPTTDIKNYIEDIHLLWQHFRVN 296
           E +A+ +GL L   LD   V   SDS + + +++   +P+     +++DIH+   +F   
Sbjct: 183 ETLAILEGLWLTQCLDLIFVQVDSDSQNSINLISQEYDPSHQPNVWVDDIHMCAINFIDI 242

Query: 297 HLSHTSRSFNSLAHVLARKGL-GGCTELWNDNFLDWI 325
              H  RS +++ H LA   +     ++W   F +W+
Sbjct: 243 LFMHIQRSSSNVTHRLASTAISSNPNKIWISRFPNWL 278

[Close]
BLAST of Tan0002207 vs. NCBI nr
Match: XP_023920968.1 (uncharacterized protein LOC112032440 [Quercus suber])

HSP 1 Score: 64.3 bits (155), Expect = 2.2e-06
Identity = 36/113 (31.86%), Postives = 55/113 (48.67%), Query Frame = 0 

Query: 197 KTGVGVAICVNDGSCLVAMANKYDCYLNSTCFEEVALYDGLKLASRLDFSQVHFFSDSLS 256
           + GVGV +   +G+ + A+A K +C L +   E  AL  G+     +    V F  DSL 
Sbjct: 61  QAGVGVLVRDEEGNVIAALARKLECPLGALAMEAKALEIGVSFVEEVGLRDVVFEGDSLL 120

Query: 257 LVAMVNGVQEPTTDIKNYIEDIHLLWQHFRVNHLSHTSRSFNSLAHVLARKGL 310
           ++  V G+ E    ++N I  +    Q FR     HT R  N+ AH+LA+  L
Sbjct: 121 VINAVQGINEAEASVRNIILGVLRNVQRFRTFDFLHTKRQGNAPAHLLAQHAL 173

[Close]
BLAST of Tan0002207 vs. NCBI nr
Match: XP_023906281.1 (uncharacterized protein LOC112018008 [Quercus suber])

HSP 1 Score: 63.5 bits (153), Expect = 3.8e-06
Identity = 43/134 (32.09%), Postives = 65/134 (48.51%), Query Frame = 0 

Query: 182 PATPTPPP---------ACNEQDGKTGVGVAICVNDGSCLVAMANKYDCYLNSTCFEEVA 241
           P  P+PPP         A +E D  + VGV I  N G  + A+   +  Y ++   E  A
Sbjct: 19  PRRPSPPPGIQKVNVDGASSEHDSFSSVGVVIRDNKGQVVAALCLPHQSYYSAELTEVFA 78

Query: 242 LYDGLKLASRLDFSQVHFFSDSLSLVAMVNGVQEPTTDIKNYIEDIHLLWQHFRVNHLSH 301
           L  G+ LA  L   ++ F  DSL ++  +N  +   T+  + I+ I  +   F   H  H
Sbjct: 79  LEQGVLLAQELQLPRLIFELDSLVVIQAIND-KANGTNYGHLIQGILQVCDSFESCHFKH 138

Query: 302 TSRSFNSLAHVLAR 307
            SRSFN++AH LA+
Sbjct: 139 LSRSFNTVAHELAQ 151

[Close]
BLAST of Tan0002207 vs. NCBI nr
Match: XP_042965938.1 (uncharacterized protein LOC122299618 [Carya illinoinensis])

HSP 1 Score: 63.2 bits (152), Expect = 4.9e-06
Identity = 43/139 (30.94%), Postives = 71/139 (51.08%), Query Frame = 0 

Query: 190  ACNEQDGKTGVGVAICVNDGSCLVAMANKYDCYLNSTCFEEVALYDGLKLASRLDFSQVH 249
            A ++++GK G+GV I   +G  LVA   + +   ++   E  AL   L++   L+F+ V 
Sbjct: 873  AVDKKEGKVGIGVVIRDEEGEVLVATGEQMNYMTDAAIAESFALRKALEVCRDLNFNNVW 932

Query: 250  FFSDSLSLVAMVNGVQEPTTDIKNYIEDIHLLWQHFRVNHLSHTSRSFNSLAHVLARKGL 309
            F  D+ ++V  VN   E  +   + IED+  L +  +   +S   R  N  AHVLAR  L
Sbjct: 933  FEGDAQNIVNAVNTETEDMSRYGSVIEDVKNLLKGRKKWRVSFVFREANEAAHVLARDVL 992

Query: 310  GGCTEL-WNDNFLDWIRNL 328
               +E+ W ++  D IR +
Sbjct: 993  FFQSEIVWIEDAPDCIRGI 1011

[Close]
BLAST of Tan0002207 vs. ExPASy TrEMBL
Match: A0A6J1DJL6 (uncharacterized protein LOC111021711 OS=Momordica charantia OX=3673 GN=LOC111021711 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.8e-07
Identity = 45/157 (28.66%), Postives = 75/157 (47.77%), Query Frame = 0 

Query: 177 KQVQIPATPTP-------PPACNEQDGKTGVGVAICVND-GSCLVAMANKYDCYLNSTCF 236
           K V   A P+P         AC   + +TG+GV +C ND G  +VAM  K D +      
Sbjct: 123 KDVNYWAPPSPDWVKINVDTACKLSNSRTGIGV-VCQNDKGEIIVAMIRKLDVFYEPLQV 182

Query: 237 EEVALYDGLKLASRLDFSQVHFFSDSLSLVAMVNGVQEPTTDIKNYIEDIHLLWQHFRVN 296
           E +A+ +GL L   LD   V   SDS + + +++   +P+     +++DIH+   +F   
Sbjct: 183 ETLAILEGLWLTQCLDLIFVQVDSDSQNSINLISQEYDPSHQPNVWVDDIHMCAINFIDI 242

Query: 297 HLSHTSRSFNSLAHVLARKGL-GGCTELWNDNFLDWI 325
              H  RS +++ H LA   +     ++W   F +W+
Sbjct: 243 LFMHIQRSSSNVTHRLASTAISSNPNKIWISRFPNWL 278

[Close]
BLAST of Tan0002207 vs. ExPASy TrEMBL
Match: A0A6J1CNR4 (uncharacterized protein LOC111012950 OS=Momordica charantia OX=3673 GN=LOC111012950 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 7.0e-06
Identity = 38/122 (31.15%), Postives = 63/122 (51.64%), Query Frame = 0 

Query: 190 ACNEQDGKTGVGVAICVND-GSCLVAMANKYDCYLNSTCFEEVALYDGLKLASRLDFSQV 249
           AC +   +T +G+ +C N+ G  L A + + + Y +    E +AL +GL+LA  L+  QV
Sbjct: 40  ACKKHQFRTAIGI-VCRNEKGQILAAASRRMEAYHDPLMAESLALLEGLRLADHLNIQQV 99

Query: 250 HFFSDSLSLVAMVNGVQEPTTDIKNYIEDIHLLWQHFRVNHLSHTSRSFNSLAHVLARKG 309
            F SDSL L+ ++            ++EDI +L ++F   +  H  RS N  A  +A   
Sbjct: 100 QFESDSLQLINLLTEDPISWCGSNVWLEDIRVLARNFIDFNFLHVCRSSNKAARRVASFA 159

Query: 310 LG 311
           +G
Sbjct: 160 VG 160

[Close]
BLAST of Tan0002207 vs. ExPASy TrEMBL
Match: A0A7N2KSS6 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.5e-05
Identity = 37/110 (33.64%), Postives = 57/110 (51.82%), Query Frame = 0 

Query: 197 KTGVGVAICVNDGSCLVAMANKYDCYLNSTCFEEVALYDGLKLASRLDFSQVHFFSDSLS 256
           + G+GV I  + G  + A++ K    L +   E  AL +G++ A  +    V F SDSL+
Sbjct: 295 QVGIGVVIRDSGGVVVAALSKKMALPLGALETEAKALEEGIQFACDVGVRDVIFESDSLN 354

Query: 257 LVAMVNGVQEPTTDIKNYIEDIHLLWQHFRVNHLSHTSRSFNSLAHVLAR 307
           +   V G+ EP + ++N I  I    Q FR    +HT R  N  AH+LA+
Sbjct: 355 ICNSVQGLSEPPSSVQNIIAGILRQVQSFRTFEFTHTRRQGNVPAHILAQ 404

[Close]
BLAST of Tan0002207 vs. ExPASy TrEMBL
Match: A0A5C7IST2 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_000473 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 5.9e-05
Identity = 36/114 (31.58%), Postives = 57/114 (50.00%), Query Frame = 0 

Query: 197 KTGVGVAICVNDGSCLVAMANKYDCYLNSTCFEEVALYDGLKLASRLDFSQVHFFSDSLS 256
           K  VG+ I  + G  L + A  ++   ++   E   +Y+GL LA+      +   SDSL+
Sbjct: 259 KFSVGIVIRDSSGRILKSAALVFNGRTSTDIAEAKVIYEGLLLATSSGLQPLSIESDSLN 318

Query: 257 LVAMVNGVQEPTTDIKNYIEDIHLLWQHFRVNHLSHTSRSFNSLAHVLARKGLG 311
           +V + NG      D+ N I DI  L    R   +S+  RS N +AH +AR+ +G
Sbjct: 319 VVRLCNGEISTRNDVFNVICDIQFLLSRERKTSISYIPRSCNRVAHEVARRAIG 372

[Close]
BLAST of Tan0002207 vs. ExPASy TrEMBL
Match: A0A1J6L6J0 (RNase H domain-containing protein OS=Nicotiana attenuata OX=49451 GN=A4A49_31321 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 7.7e-05
Identity = 32/110 (29.09%), Postives = 54/110 (49.09%), Query Frame = 0 

Query: 197 KTGVGVAICVNDGSCLVAMANKYDCYLNSTCFEEVALYDGLKLASRLDFSQVHFFSDSLS 256
           K  +G+     +G  L A  +       +   E  A+   ++LA +  +  +H  SDSL+
Sbjct: 32  KASIGMVALKANGDVLYAYGSPIPFVGKAIMAEAWAIRKAIQLAVKYGWKNIHILSDSLT 91

Query: 257 LVAMVNGVQEPTTDIKNYIEDIHLLWQHFRVNHLSHTSRSFNSLAHVLAR 307
           +V M+NG + P+ ++    EDI  L QH       + SR FN+ +H LA+
Sbjct: 92  MVQMLNGSRGPSWEVNTLCEDIWALQQHLSDVSFKYLSRRFNTCSHRLAK 141

The following BLAST results are available for this feature:
BLAST of Tan0002207 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0002207 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_030969974.11.8e-0833.33uncharacterized protein LOC115990267 [Quercus lobata][more]
XP_022154440.15.8e-0728.66uncharacterized protein LOC111021711 [Momordica charantia][more]
XP_023920968.12.2e-0631.86uncharacterized protein LOC112032440 [Quercus suber][more]
XP_023906281.13.8e-0632.09uncharacterized protein LOC112018008 [Quercus suber][more]
XP_042965938.14.9e-0630.94uncharacterized protein LOC122299618 [Carya illinoinensis][more]
BLAST of Tan0002207 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DJL62.8e-0728.66uncharacterized protein LOC111021711 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A6J1CNR47.0e-0631.15uncharacterized protein LOC111012950 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
A0A7N2KSS61.5e-0533.64Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A5C7IST25.9e-0531.58RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_000473 ... [more]
A0A1J6L6J07.7e-0529.09RNase H domain-containing protein OS=Nicotiana attenuata OX=49451 GN=A4A49_31321... [more]
BLAST of Tan0002207 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 190..307
e-value: 2.9E-20
score: 72.3
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 189..310
e-value: 1.8E-13
score: 52.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR47723:SF1OS05G0353850 PROTEINcoord: 191..320
NoneNo IPR availablePANTHERPTHR47723OS05G0353850 PROTEINcoord: 191..320
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 191..306
e-value: 1.16051E-12
score: 61.9464
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 190..311

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0002207.1Tan0002207.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity