Tan0002185 (gene) Snake gourd v1

Overview


Name	Tan0002185
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Gag/pol protein
Location	LG07: 25814285 .. 25815989 (+)
RNA-Seq Expression	Tan0002185
Synteny	Tan0002185

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAGCTCTTTTATTCAATTACTCGCCTCCGACAAACTTAACGACGATAACTTTGGAACTTGGAAATCAAACTTGAATACAATTCTTGTGATTGATGATCTAAGGTTCGTCTTAACGGAGGAATGTCCTCCCCCTCCTAGCTCGTCTGCAAATCGAACAGTTCGGGATGCATTTGACAAATGGATTAGGGCTAATGATAAGGCTCGAGTCTACATCTTAACCAACATATCTAATGTGTTGTCTAAGAAACATGAGGGCATGATCACCGCAAAGGAGATCATGGGATCATTACAAGCCATGTTTGGACAACCGTCCTCGTCGGTTCGTTATGATGCTCTCAAGTACGTTTACAACTCCCGAATGAAGGAGGGAACTTCTGTTAGGGAGCATGTCCTTAATATGTGGTCCACTTCAACGTGGCAGAGGTAAACAGGGTTTTCATAGATGAGAACAGTCAGGTTAGCTTTATAATGGATTTTCTTCCGAAAAGTTTCCTACAGTTTCCGCACCAATTCAGTGATGAACAAGAAAGAGTATAACATGACTACTCTACTCAACGAGCTCCAGACTTTCGAGTCCCTGATGAAATCAAAGGGAAAAGAGAAGGAGACAAATGTTATCACTTCGAGGAAGTTCCTAAGAGGATTGTCCTCAGGGACTAAGTCTGGTCCTTCTTTTTCAAAGAATAAGAAGAATGATAAAGGGAAGGAAAAAGCTCCCATACGCAAGGTTAAAGCCACAGGAAAATGTTTCCATTGTGGTGAGGACGGGCACTAGAAAAGGAACTACTTGAAGTACCTTGCGAAAAAGAAAGCTGAGAAAGAAAAACAAGGTAATTATGATTTACTTGTTGTTCAAACATGTTTAGTGGAACATGATGATTCCACCTGAATACTAGATTTAGGAGTCACTAGCCATGTGTGTTCTTCTTGTTAGGAAACTAGTTCCTGGAGGGAGCTTGCTGATAGTGAAATAACTCTCAGGGTTAGAATAGGAGAGGTTGTCTCAGCTAGAGGAGTGAGAGCAGTCAAGTTGTTATTTAGAGATAGATTCATTTTATTAGAAAATGTACTTTTGGTTCCTGTAATCAAAAGAAATTTTGCATCTATCTATTGTTTACTTGAACATATGTATAAAGTATCTTTTGATTATAATGAAGTGTGCATTTGCAAAAGAGATGTACGAATATGTTCTGCTAAACTTGAAAACAACTTATATGTGTTAAGACCAACAGAGATAAAAGCTATTTTGAACACCGAGATGTTTAAAACAACTGATACTCAAAATAAAAGGCAGAAGCTTTCTCCAAGTACCTATCTTTGGCACTTGAGACTAGGTCACATTAATTTCAATAGGATTGGAAGATTGGTTAAGAGTGGTCGCCTAAGTCAGCTAGAGGACAACTCTTTACCACCATGTGAATCCTGTCTTGATGGAAAAAAGACTAAACTACCTTTTTTTGAAAAAAGGTTATAGGGCTAAAGAACCCTTGGAACTCATGCATTCGAATCTCTGTGGTCCAATGAATGTCAAGGCACGAGGAGGGTATGAATATTTCATCAGTTTCATTGATGATTATTCTAGGTATGGCTATCTTTCCCTAATGCATCATAAGTCCGAAACCCTTGAAAAGTTCAAGGAGTATAAGGCAGAGGTTGAGAACGCGATAGGTAAAACGATTGAAACACTTCAATCAGATTGA

mRNA sequence

ATGTCGAGCTCTTTTATTCAATTACTCGCCTCCGACAAACTTAACGACGATAACTTTGGAACTTGGAAATCAAACTTGAATACAATTCTTGTGATTGATGATCTAAGGTTCGTCTTAACGGAGGAATGTCCTCCCCCTCCTAGCTCGTCTGCAAATCGAACAGTTCGGGATGCATTTGACAAATGGATTAGGGCTAATGATAAGGCTCGAGTCTACATCTTAACCAACATATCTAATGTGTTGGCTAAAGAACCCTTGGAACTCATGCATTCGAATCTCTGTGGTCCAATGAATGTCAAGGCACGAGGAGGGTATGAATATTTCATCAGTTTCATTGATGATTATTCTAGGTATGGCTATCTTTCCCTAATGCATCATAAGTCCGAAACCCTTGAAAAGTTCAAGGAGTATAAGGCAGAGGTTGAGAACGCGATAGGTAAAACGATTGAAACACTTCAATCAGATTGA

Coding sequence (CDS)

ATGTCGAGCTCTTTTATTCAATTACTCGCCTCCGACAAACTTAACGACGATAACTTTGGAACTTGGAAATCAAACTTGAATACAATTCTTGTGATTGATGATCTAAGGTTCGTCTTAACGGAGGAATGTCCTCCCCCTCCTAGCTCGTCTGCAAATCGAACAGTTCGGGATGCATTTGACAAATGGATTAGGGCTAATGATAAGGCTCGAGTCTACATCTTAACCAACATATCTAATGTGTTGGCTAAAGAACCCTTGGAACTCATGCATTCGAATCTCTGTGGTCCAATGAATGTCAAGGCACGAGGAGGGTATGAATATTTCATCAGTTTCATTGATGATTATTCTAGGTATGGCTATCTTTCCCTAATGCATCATAAGTCCGAAACCCTTGAAAAGTTCAAGGAGTATAAGGCAGAGGTTGAGAACGCGATAGGTAAAACGATTGAAACACTTCAATCAGATTGA

Protein sequence

MSSSFIQLLASDKLNDDNFGTWKSNLNTILVIDDLRFVLTEECPPPPSSSANRTVRDAFDKWIRANDKARVYILTNISNVLAKEPLELMHSNLCGPMNVKARGGYEYFISFIDDYSRYGYLSLMHHKSETLEKFKEYKAEVENAIGKTIETLQSD

Homology

[Close]

BLAST of Tan0002185 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.2e-09
Identity = 26/70 (37.14%), Postives = 50/70 (71.43%), Query Frame = 0


Query: 86  LELMHSNLCGPMNVKARGGYEYFISFIDDYSRYGYLSLMHHKSETLEKFKEYKAEVENAI 145
           L+L++S++CGPM +++ GG +YF++FIDD SR  ++ ++  K +  + F+++ A VE   
Sbjct: 481 LDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERET 540

Query: 146 GKTIETLQSD 156
           G+ ++ L+SD
Sbjct: 541 GRKLKRLRSD 550

[Close]

BLAST of Tan0002185 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 45.8 bits (107), Expect = 5.1e-04
Identity = 19/60 (31.67%), Postives = 35/60 (58.33%), Query Frame = 0


Query: 83  KEPLELMHSNLCGPMNVKARGGYEYFISFIDDYSRYGYLSLMHHKSETLEKFKEYKAEVE 142
           K PL ++HS++CGP+         YF+ F+D ++ Y    L+ +KS+    F+++ A+ E
Sbjct: 478 KRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSE 537

[Close]

BLAST of Tan0002185 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 8.6e-04
Identity = 24/78 (30.77%), Postives = 44/78 (56.41%), Query Frame = 0


Query: 78  SNVLAKEPLELMHSNLCGPMNVKARGGYEYFISFIDDYSRYGYLSLMHHKSETLEKFKEY 137
           S + + +PLE ++S++     + +   Y Y++ F+D ++RY +L  +  KS+  + F  +
Sbjct: 495 STITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIF 554

Query: 138 KAEVENAIGKTIETLQSD 156
           K+ VEN     I TL SD
Sbjct: 555 KSLVENRFQTRIGTLYSD 571

[Close]

BLAST of Tan0002185 vs. NCBI nr
Match: KAA0054515.1 (gag/pol protein [Cucumis melo var. makuwa] >TYJ98280.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 181.8 bits (460), Expect = 4.5e-42
Identity = 108/256 (42.19%), Postives = 129/256 (50.39%), Query Frame = 0


Query: 1   MSSSFIQLLASDKLNDDNFGTWKSNLNTILVIDDLRFVLTEECPPPPSSSANRTVRDAFD 60
           MSSS I LL  D+L  +N+ TWKS LN ILVI DLRFVL EECP  P+  A+++VRDA+D
Sbjct: 1   MSSSIIALLKKDQLTGENYATWKSKLNMILVIPDLRFVLMEECPHFPTKYASQSVRDAYD 60

Query: 61  KWIRANDKARVYILTNISNVL--------------------------------------- 120
           +W +ANDKAR++IL ++S++L                                       
Sbjct: 61  RWTKANDKARLHILASMSDILSKKHEIMITARATNHVCSSLQETSSFKQLEESEMTLKVE 120

Query: 121 ------------------------------------------------------------ 156
                                                                       
Sbjct: 121 TGVVILARAVGDAKLGHINLDRIGRLVKNGLLNKLEDDSLPPCESCLKGKMTKRPFTGKG 180

[Close]

BLAST of Tan0002185 vs. NCBI nr
Match: KAA0059677.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK26116.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 179.1 bits (453), Expect = 2.9e-41
Identity = 108/268 (40.30%), Postives = 133/268 (49.63%), Query Frame = 0


Query: 1   MSSSFIQLLASDKLNDDNFGTWKSNLNTILVIDDLRFVLTEECPPPPSSSANRTVRDAFD 60
           M+SS +QLLA +KLN DN+  WKSNLNTILV+DDLRFVLTEECP  P+S+AN+T   A+D
Sbjct: 1   MNSSIVQLLAFEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQTPASNANQTSPKAYD 60

Query: 61  KWIRANDKARVYILTNISNVLAKE------------------------------------ 120
           +WI+AN+KA VYIL ++S+VLAK+                                    
Sbjct: 61  RWIKANEKACVYILASMSDVLAKKYESLTTAKEIMDSLKGMFGQPKWSLRHETIKYIYIK 120

Query: 121 ------------------------------------------------------------ 156
                                                                       
Sbjct: 121 RMKEGTSVREHVLDMMIHFNIAEVNGGAIDEAMRIGRLVKNGLLSQFEDNSLLPCDSCLE 180

[Close]

BLAST of Tan0002185 vs. NCBI nr
Match: KAA0059678.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 177.2 bits (448), Expect = 1.1e-40
Identity = 109/279 (39.07%), Postives = 132/279 (47.31%), Query Frame = 0


Query: 1   MSSSFIQLLASDKLNDDNFGTWKSNLNTILVIDDLRFVLTEECPPPPSSSANRTVRDAFD 60
           MSSS I LL  D+L D+N+ TWKS LN ILVI DLRFVL EECPP P+  A+++VRDA+D
Sbjct: 1   MSSSIIALLKIDQLTDENYATWKSKLNMILVIADLRFVLMEECPPFPTKYASQSVRDAYD 60

Query: 61  KWIRANDKARVYILTNISNVL--------------------------------------- 120
           +W +ANDK+R++ILT++S++L                                       
Sbjct: 61  RWTKANDKSRLHILTSMSDILSKKHEIMIKQEANVAHSRRFAPSSSGSEKIQKRKEGKGK 120

Query: 121 ------------------------------------------------------------ 156
                                                                       
Sbjct: 121 GPTITVEGKGKTKVVIKGKCFHCNVDEHWKKNCPKYLVKKKEKEGATNHVCSSLQETSSF 180

[Close]

BLAST of Tan0002185 vs. NCBI nr
Match: TYK29762.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 175.6 bits (444), Expect = 3.2e-40
Identity = 109/275 (39.64%), Postives = 135/275 (49.09%), Query Frame = 0


Query: 1   MSSSFIQLLASDKLNDDNFGTWKSNLNTILVIDDLRFVLTEECPPPPSSSANRTVRDAFD 60
           M+SS +QLLAS+KLN DN+  WKSNLNTIL + DLRFVLT +CP  P+S+ANRT R A+D
Sbjct: 1   MNSSIVQLLASEKLNGDNYAAWKSNLNTILDVGDLRFVLTGKCPQTPASNANRTSRKAYD 60

Query: 61  KWIRANDKARVYILTNISNVLAKE------------------------------------ 120
           +WI+AN+KARVYIL ++S+VLAK+                                    
Sbjct: 61  RWIKANEKARVYILASMSDVLAKKHKSLATAKEIMDSLKGMFGQPELFLGHDVIKYIHTK 120

Query: 121 ------------------------------------------------------------ 156
                                                                       
Sbjct: 121 QMKEGTSIREHVLDMMMHFNIAEVNGSVIDEGNQVSFILESLPKSFIPFQTNVSLNKIEF 180

[Close]

BLAST of Tan0002185 vs. NCBI nr
Match: TYJ98650.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 168.7 bits (426), Expect = 4.0e-38
Identity = 102/252 (40.48%), Postives = 121/252 (48.02%), Query Frame = 0


Query: 1   MSSSFIQLLASDKLNDDNFGTWKSNLNTILVIDDLRFVLTEECPPPPSSSANRTVRDAFD 60
           MSS  I LL  D+L  +N+ TWKS LN ILVI DLRFVL EEC P P   A+++VRDA+D
Sbjct: 1   MSSLIIALLKKDQLTGENYATWKSKLNMILVIADLRFVLMEECHPFPIKYASQSVRDAYD 60

Query: 61  KWIRANDKARVYILTNISNVL--------------------------------------- 120
           +W +ANDKAR++IL ++S++L                                       
Sbjct: 61  RWTKANDKARLHILASMSDILSKKHEIMVTTRQIMDSLREMFGQPSIQIKQEANVAYSRR 120

Query: 121 ------------------------------------------------------------ 146
                                                                       
Sbjct: 121 FSPSSSGSEKIQKRKGGKGKGPTIAAEGNGKAKVTIKGNISTEMLIDIGKETALSKMTKR 180

[Close]

BLAST of Tan0002185 vs. ExPASy TrEMBL
Match: A0A5A7ULG4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold203G00250 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.2e-42
Identity = 108/256 (42.19%), Postives = 129/256 (50.39%), Query Frame = 0


Query: 1   MSSSFIQLLASDKLNDDNFGTWKSNLNTILVIDDLRFVLTEECPPPPSSSANRTVRDAFD 60
           MSSS I LL  D+L  +N+ TWKS LN ILVI DLRFVL EECP  P+  A+++VRDA+D
Sbjct: 1   MSSSIIALLKKDQLTGENYATWKSKLNMILVIPDLRFVLMEECPHFPTKYASQSVRDAYD 60

Query: 61  KWIRANDKARVYILTNISNVL--------------------------------------- 120
           +W +ANDKAR++IL ++S++L                                       
Sbjct: 61  RWTKANDKARLHILASMSDILSKKHEIMITARATNHVCSSLQETSSFKQLEESEMTLKVE 120

Query: 121 ------------------------------------------------------------ 156
                                                                       
Sbjct: 121 TGVVILARAVGDAKLGHINLDRIGRLVKNGLLNKLEDDSLPPCESCLKGKMTKRPFTGKG 180

[Close]

BLAST of Tan0002185 vs. ExPASy TrEMBL
Match: A0A5A7UYF5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00290 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.4e-41
Identity = 108/268 (40.30%), Postives = 133/268 (49.63%), Query Frame = 0


Query: 1   MSSSFIQLLASDKLNDDNFGTWKSNLNTILVIDDLRFVLTEECPPPPSSSANRTVRDAFD 60
           M+SS +QLLA +KLN DN+  WKSNLNTILV+DDLRFVLTEECP  P+S+AN+T   A+D
Sbjct: 1   MNSSIVQLLAFEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQTPASNANQTSPKAYD 60

Query: 61  KWIRANDKARVYILTNISNVLAKE------------------------------------ 120
           +WI+AN+KA VYIL ++S+VLAK+                                    
Sbjct: 61  RWIKANEKACVYILASMSDVLAKKYESLTTAKEIMDSLKGMFGQPKWSLRHETIKYIYIK 120

Query: 121 ------------------------------------------------------------ 156
                                                                       
Sbjct: 121 RMKEGTSVREHVLDMMIHFNIAEVNGGAIDEAMRIGRLVKNGLLSQFEDNSLLPCDSCLE 180

[Close]

BLAST of Tan0002185 vs. ExPASy TrEMBL
Match: A0A5A7UWW4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54G001280 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 5.4e-41
Identity = 109/279 (39.07%), Postives = 132/279 (47.31%), Query Frame = 0


Query: 1   MSSSFIQLLASDKLNDDNFGTWKSNLNTILVIDDLRFVLTEECPPPPSSSANRTVRDAFD 60
           MSSS I LL  D+L D+N+ TWKS LN ILVI DLRFVL EECPP P+  A+++VRDA+D
Sbjct: 1   MSSSIIALLKIDQLTDENYATWKSKLNMILVIADLRFVLMEECPPFPTKYASQSVRDAYD 60

Query: 61  KWIRANDKARVYILTNISNVL--------------------------------------- 120
           +W +ANDK+R++ILT++S++L                                       
Sbjct: 61  RWTKANDKSRLHILTSMSDILSKKHEIMIKQEANVAHSRRFAPSSSGSEKIQKRKEGKGK 120

Query: 121 ------------------------------------------------------------ 156
                                                                       
Sbjct: 121 GPTITVEGKGKTKVVIKGKCFHCNVDEHWKKNCPKYLVKKKEKEGATNHVCSSLQETSSF 180

[Close]

BLAST of Tan0002185 vs. ExPASy TrEMBL
Match: A0A5D3E1K0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2208G00190 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.6e-40
Identity = 109/275 (39.64%), Postives = 135/275 (49.09%), Query Frame = 0


Query: 1   MSSSFIQLLASDKLNDDNFGTWKSNLNTILVIDDLRFVLTEECPPPPSSSANRTVRDAFD 60
           M+SS +QLLAS+KLN DN+  WKSNLNTIL + DLRFVLT +CP  P+S+ANRT R A+D
Sbjct: 1   MNSSIVQLLASEKLNGDNYAAWKSNLNTILDVGDLRFVLTGKCPQTPASNANRTSRKAYD 60

Query: 61  KWIRANDKARVYILTNISNVLAKE------------------------------------ 120
           +WI+AN+KARVYIL ++S+VLAK+                                    
Sbjct: 61  RWIKANEKARVYILASMSDVLAKKHKSLATAKEIMDSLKGMFGQPELFLGHDVIKYIHTK 120

Query: 121 ------------------------------------------------------------ 156
                                                                       
Sbjct: 121 QMKEGTSIREHVLDMMMHFNIAEVNGSVIDEGNQVSFILESLPKSFIPFQTNVSLNKIEF 180

[Close]

BLAST of Tan0002185 vs. ExPASy TrEMBL
Match: A0A5A7V4G9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G005830 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 7.3e-38
Identity = 101/271 (37.27%), Postives = 126/271 (46.49%), Query Frame = 0


Query: 1   MSSSFIQLLASDKLNDDNFGTWKSNLNTILVIDDLRFVLTEECPPPPSSSANRTVRDAFD 60
           M+SS +QLLAS KL+ DN+  WKSNLNTILV+ DLRFVLT+ECP  P+S+ANRT R A+D
Sbjct: 1   MNSSIVQLLASKKLDGDNYAAWKSNLNTILVVGDLRFVLTKECPQTPTSNANRTSRKAYD 60

Query: 61  KWIRANDKARVYILTNISNVL--------------------------------------- 120
           +WI+AN+KARVYIL ++S+V                                        
Sbjct: 61  RWIKANEKARVYILASVSDVFAKNGKGNTPKQNKKKKTTKKGKCYHYGENGHWLRNCPKY 120

Query: 121 ------------------------------------------------------------ 144
                                                                       
Sbjct: 121 LAQKKAEKEEQGKYDLLENSSWKRLAEGEITLKVGTGEMVSAKAVGDLKIGRLVKSGLLS 180

The following BLAST results are available for this feature:

BLAST of Tan0002185 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	5.2e-09	37.14	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	5.1e-04	31.67	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	8.6e-04	30.77	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]

BLAST of Tan0002185 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0054515.1	4.5e-42	42.19	gag/pol protein [Cucumis melo var. makuwa] >TYJ98280.1 gag/pol protein [Cucumis ...	[more]
KAA0059677.1	2.9e-41	40.30	gag/pol protein [Cucumis melo var. makuwa] >TYK26116.1 gag/pol protein [Cucumis ...	[more]
KAA0059678.1	1.1e-40	39.07	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK29762.1	3.2e-40	39.64	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYJ98650.1	4.0e-38	40.48	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Tan0002185 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7ULG4	2.2e-42	42.19	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold203G0025...	[more]
A0A5A7UYF5	1.4e-41	40.30	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G0029...	[more]
A0A5A7UWW4	5.4e-41	39.07	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54G00128...	[more]
A0A5D3E1K0	1.6e-40	39.64	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2208G001...	[more]
A0A5A7V4G9	7.3e-38	37.27	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G00583...	[more]

BLAST of Tan0002185 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 79..155 e-value: 1.3E-7 score: 33.1
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 82..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0002185.1	Tan0002185.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding