Tan0002180 (gene) Snake gourd v1

Overview


Name	Tan0002180
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	CASP-like protein
Location	LG10: 5713861 .. 5715080 (-)
RNA-Seq Expression	Tan0002180
Synteny	Tan0002180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGATTTTCCTGGGACTCCTGGGACTGTGACGGGTCTGATTCTGAGGATTTTGCAGTGTGTTTTTGCTGCTGGCTCTATTGCTTCTATGGCTTCAACTACCTACTTCTTCAAATTCACAGCGTTTTGGTGTGTTTTCTTTGCCCCCCTTTTTGATTCCTCTGTTTGACTTGCACATCCATTATTTCTGCTTGGTTTTTTCCATGCTCATGGATAAGATTTTATTTTTCCTGCCACAAGTACTGAATTTTGACCGTCTTTCAGCAATTTGGATTATCAAAGTTCAAGATTTGTTCTTCCTATTTTGCAACTCTATTGATTGTTGACAATGACCAAAACTATCCATCAGCATAGGATTGGAAATCAATCTGCAAAATGTAGATGAAAACATGAGCAGTTCCCCTGCAGTTCTCTAGTTGGGTCTTCTTGTAGAGTTCTTATTTCCCTCGCACCTTTGCCATGAAATCAGTCTATCTTGTTTGCAATGTTCTTTGTCATAACTATAGCACTCCTAATTCCTTAAATTCATGCATTTCTGCATTGAGGCCACTGCTCGAGTTGGAAACATCTATTCAAACTTGAATACATGCTCATTTTGGATGAATCCATCAAGCAATCTTACTGTCCTATTCAGTTTCCAACTTCTAGCAATATCAATGTGTGTCGGCCTAAACCAAGATGATGCAGTGATATGGAACAGCTTATTCTTTGCCCTGAAAGAATCCCGAAACGTATAGAAGTTTACAAATAGAATACAACTTGTTTGATGTTTTCTTATCATTTGTCTTCTGTGCAGCTACCTGATTGCTTCATTGGGGCTGCAAATCACCTGGAGCTTTGTGCTAGCATTCATAGATGCCTATGCACTGGCGAGAAACAAAGCCCTCCAGAGCACAATTCTCGTTAGCCTCTTCACCGTCGGGGATTGGGTAAGTCGCCATGAAACCTTTTCACCATCTTCATTGTTATATGATGGTCTGGTAGTGGTCTCAGAGAATTCAAAGTTTCATGTATTATGTGCAGATAACAGCGACATTGACACTCGCAGCAGCTTCTGCTTCTAGTGGGATAGCAATATTGTATTTTAATGACTTGAAAAGCTGTAGTTTTATAGAGGAATGCCCAAAATACCAACTTTCCGTTGCCTTGGCATTCCTCTGCTGGATAACTATTGCTACTTCTTCTCTTATTATGGGATGGCTATTGGCTTCCAGTTAA

mRNA sequence

ATGAAGGATTTTCCTGGGACTCCTGGGACTGTGACGGGTCTGATTCTGAGGATTTTGCAGTGTGTTTTTGCTGCTGGCTCTATTGCTTCTATGGCTTCAACTACCTACTTCTTCAAATTCACAGCGTTTTGCTACCTGATTGCTTCATTGGGGCTGCAAATCACCTGGAGCTTTGTGCTAGCATTCATAGATGCCTATGCACTGGCGAGAAACAAAGCCCTCCAGAGCACAATTCTCGTTAGCCTCTTCACCGTCGGGGATTGGATAACAGCGACATTGACACTCGCAGCAGCTTCTGCTTCTAGTGGGATAGCAATATTGTATTTTAATGACTTGAAAAGCTGTAGTTTTATAGAGGAATGCCCAAAATACCAACTTTCCGTTGCCTTGGCATTCCTCTGCTGGATAACTATTGCTACTTCTTCTCTTATTATGGGATGGCTATTGGCTTCCAGTTAA

Coding sequence (CDS)

ATGAAGGATTTTCCTGGGACTCCTGGGACTGTGACGGGTCTGATTCTGAGGATTTTGCAGTGTGTTTTTGCTGCTGGCTCTATTGCTTCTATGGCTTCAACTACCTACTTCTTCAAATTCACAGCGTTTTGCTACCTGATTGCTTCATTGGGGCTGCAAATCACCTGGAGCTTTGTGCTAGCATTCATAGATGCCTATGCACTGGCGAGAAACAAAGCCCTCCAGAGCACAATTCTCGTTAGCCTCTTCACCGTCGGGGATTGGATAACAGCGACATTGACACTCGCAGCAGCTTCTGCTTCTAGTGGGATAGCAATATTGTATTTTAATGACTTGAAAAGCTGTAGTTTTATAGAGGAATGCCCAAAATACCAACTTTCCGTTGCCTTGGCATTCCTCTGCTGGATAACTATTGCTACTTCTTCTCTTATTATGGGATGGCTATTGGCTTCCAGTTAA

Protein sequence

MKDFPGTPGTVTGLILRILQCVFAAGSIASMASTTYFFKFTAFCYLIASLGLQITWSFVLAFIDAYALARNKALQSTILVSLFTVGDWITATLTLAAASASSGIAILYFNDLKSCSFIEECPKYQLSVALAFLCWITIATSSLIMGWLLASS

Homology

[Close]

BLAST of Tan0002180 vs. ExPASy Swiss-Prot
Match: Q8L7R5 (CASP-like protein 5B3 OS=Arabidopsis thaliana OX=3702 GN=At3g23200 PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.4e-51
Identity = 105/152 (69.08%), Postives = 123/152 (80.92%), Query Frame = 0


Query: 1   MKDFPGTPGTVTGLILRILQCVFAAGSIASMASTTYFFKFTAFCYLIASLGLQITWSFVL 60
           M D PGTPGT+TGL+LRI QCVFAAGSI+ M ++  FF FTAFCYLIA++GLQ+ WSF L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 61  AFIDAYALARNKALQSTILVSLFTVGDWITATLTLAAASASSGIAILYFNDLKSCSFIEE 120
           A +D +AL R K L S +LVSLF VGDW+T+TL+LA AS+S+GI +LYF DL SCSF  E
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120

Query: 121 CPKYQLSVALAFLCWITIATSSLIMGWLLASS 153
           C KYQLSVALAFLCWITIA SSL   WLLAS+
Sbjct: 121 CWKYQLSVALAFLCWITIAVSSLTTLWLLASA 152

[Close]

BLAST of Tan0002180 vs. ExPASy Swiss-Prot
Match: B8BD96 (CASP-like protein 5B3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30532 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 7.6e-37
Identity = 83/153 (54.25%), Postives = 109/153 (71.24%), Query Frame = 0


Query: 1   MKDFPGTPGTVTGLILRILQCVFAAGSIASMASTTYFFKFTAFCYLIASLGLQITWSFVL 60
           MKD  G+PGT +G+ LR+ QCVFA  S+ +MAS   F  +TAFCYLIAS+GLQ+ WSF L
Sbjct: 1   MKDVVGSPGTWSGMSLRVSQCVFAGASVVAMASAYGFSNYTAFCYLIASMGLQLLWSFGL 60

Query: 61  AFIDAYALARNKALQSTILVSLFTVGDWITATLTLAAASASSGIAILYFNDLKSCSFIEE 120
           A +D Y+L   + L + +LVSLF VGDW+TA L+ AAASAS+G+ IL+  D+  C    +
Sbjct: 61  ACLDIYSLQTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQ 120

Query: 121 --CPKYQLSVALAFLCWITIATSSLIMGWLLAS 152
             C +Y+LSV LAF+ W  IATS++ M WLLAS
Sbjct: 121 LSCGRYELSVILAFITWSFIATSAVSMFWLLAS 153

[Close]

BLAST of Tan0002180 vs. ExPASy Swiss-Prot
Match: Q6K478 (CASP-like protein 5B3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0249400 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 7.6e-37
Identity = 83/153 (54.25%), Postives = 109/153 (71.24%), Query Frame = 0


Query: 1   MKDFPGTPGTVTGLILRILQCVFAAGSIASMASTTYFFKFTAFCYLIASLGLQITWSFVL 60
           MKD  G+PGT +G+ LR+ QCVFA  S+ +MAS   F  +TAFCYLIAS+GLQ+ WSF L
Sbjct: 1   MKDVVGSPGTWSGMSLRVSQCVFAGASVVAMASAYGFSNYTAFCYLIASMGLQLLWSFGL 60

Query: 61  AFIDAYALARNKALQSTILVSLFTVGDWITATLTLAAASASSGIAILYFNDLKSCSFIEE 120
           A +D Y+L   + L + +LVSLF VGDW+TA L+ AAASAS+G+ IL+  D+  C    +
Sbjct: 61  ACLDIYSLQTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQ 120

Query: 121 --CPKYQLSVALAFLCWITIATSSLIMGWLLAS 152
             C +Y+LSV LAF+ W  IATS++ M WLLAS
Sbjct: 121 LSCGRYELSVILAFITWSFIATSAVSMFWLLAS 153

[Close]

BLAST of Tan0002180 vs. ExPASy Swiss-Prot
Match: Q945M8 (CASP-like protein 5B2 OS=Arabidopsis thaliana OX=3702 GN=At3g53850 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 8.4e-36
Identity = 85/153 (55.56%), Postives = 107/153 (69.93%), Query Frame = 0


Query: 1   MKDFPGTPGTVTGLILRILQCVFAAGSIASMASTTYFFKFTAFCYLIASLGLQITWSFVL 60
           MK   G PGTV GL+LRI QC  AA SI  M S   F   TAFCYLIAS+GLQ+ WSF L
Sbjct: 1   MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGL 60

Query: 61  AFIDAYALARNKALQSTILVSLFTVGDWITATLTLAAASASSGIAILYFNDLKSCSFIEE 120
           A +D YAL   K LQ+ ILVSLF VGDW+TA L+LAAA +S+G+ +LY  D+K C+   +
Sbjct: 61  ACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQ 120

Query: 121 --CPKYQLSVALAFLCWITIATSSLIMGWLLAS 152
             C +Y+++VAL+F+ WI IA SS +  W+LAS
Sbjct: 121 YPCLRYEVAVALSFVTWIQIAVSSHVTFWILAS 153

[Close]

BLAST of Tan0002180 vs. ExPASy Swiss-Prot
Match: D5ACW4 (CASP-like protein 5B1 (Fragment) OS=Picea sitchensis OX=3332 PE=2 SV=2)

HSP 1 Score: 150.6 bits (379), Expect = 1.4e-35
Identity = 83/151 (54.97%), Postives = 105/151 (69.54%), Query Frame = 0


Query: 1   MKDFPGTPGTVTGLILRILQCVFAAGSIASMASTTYFFKFTAFCYLIASLGLQITWSFVL 60
           MKD PGTPGTV GL LR+ Q +FAA S+  M ++  F  FTAFCYL A++ LQ  WSFVL
Sbjct: 32  MKDLPGTPGTVGGLALRMGQFIFAAASVVIMVTSDEFINFTAFCYLAAAMALQFLWSFVL 91

Query: 61  AFIDAYALARNKALQSTILVSLFTVGDWITATLTLAAASASSGIAILYFNDLKSCSFIEE 120
           A ID YAL   + L ++IL+SLF VGDW+TATL+LAAA +++GI +L+  DL  C  +  
Sbjct: 92  ATIDVYALLIKRGLPNSILLSLFVVGDWVTATLSLAAACSTAGITVLFDKDLNYCDQM-H 151

Query: 121 CPKYQLSVALAFLCWITIATSSLIMGWLLAS 152
           C +YQLS  +AF  W+ IA SSLI   LL S
Sbjct: 152 CRRYQLSATMAFFSWVLIAISSLITLLLLVS 181

[Close]

BLAST of Tan0002180 vs. NCBI nr
Match: XP_038877372.1 (CASP-like protein 5B3 [Benincasa hispida])

HSP 1 Score: 261.2 bits (666), Expect = 5.7e-66
Identity = 137/152 (90.13%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MKDFPGTPGTVTGLILRILQCVFAAGSIASMASTTYFFKFTAFCYLIASLGLQITWSFVL 60
           MKDFPGTPGT+TGLILRILQCVFAA SIASMAST+YFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 1   MKDFPGTPGTMTGLILRILQCVFAAASIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60

Query: 61  AFIDAYALARNKALQSTILVSLFTVGDWITATLTLAAASASSGIAILYFNDLKSCSFIEE 120
           A IDAYAL RNKALQST+L+SLF  GDWITATLTLAAAS+SSG+AILYFNDLKSCSFI E
Sbjct: 61  ALIDAYALVRNKALQSTVLISLFVAGDWITATLTLAAASSSSGVAILYFNDLKSCSFIGE 120

Query: 121 CPKYQLSVALAFLCWITIATSSLIMGWLLASS 153
           C KYQLSVALAFL WITIATSSLIM WLLASS
Sbjct: 121 CQKYQLSVALAFLSWITIATSSLIMVWLLASS 152

[Close]

BLAST of Tan0002180 vs. NCBI nr
Match: XP_004134071.1 (CASP-like protein 5B3 [Cucumis sativus] >KGN56870.1 hypothetical protein Csa_011136 [Cucumis sativus])

HSP 1 Score: 260.4 bits (664), Expect = 9.8e-66
Identity = 136/152 (89.47%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MKDFPGTPGTVTGLILRILQCVFAAGSIASMASTTYFFKFTAFCYLIASLGLQITWSFVL 60
           MKDFPGTPGTVTGLILRILQCVFAA S+ASMAST YFFKFTAFCYLIASLGLQITWSF+L
Sbjct: 1   MKDFPGTPGTVTGLILRILQCVFAAASVASMASTAYFFKFTAFCYLIASLGLQITWSFML 60

Query: 61  AFIDAYALARNKALQSTILVSLFTVGDWITATLTLAAASASSGIAILYFNDLKSCSFIEE 120
           A IDAYAL RNKALQST+LVSLF VGDWITATLTLAAAS+SSG+AILYFNDLKSC+FI E
Sbjct: 61  ALIDAYALVRNKALQSTVLVSLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCNFIGE 120

Query: 121 CPKYQLSVALAFLCWITIATSSLIMGWLLASS 153
           C KYQLSVALAFL WITIATSSLIM W+LASS
Sbjct: 121 CQKYQLSVALAFLSWITIATSSLIMVWILASS 152

[Close]

BLAST of Tan0002180 vs. NCBI nr
Match: XP_008438541.1 (PREDICTED: CASP-like protein 5B3 [Cucumis melo])

HSP 1 Score: 257.7 bits (657), Expect = 6.3e-65
Identity = 135/152 (88.82%), Postives = 141/152 (92.76%), Query Frame = 0


Query: 1   MKDFPGTPGTVTGLILRILQCVFAAGSIASMASTTYFFKFTAFCYLIASLGLQITWSFVL 60
           MKDFPGTPGT  GLILR+LQCVFAA SIASMAST YFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 1   MKDFPGTPGTAMGLILRVLQCVFAAASIASMASTAYFFKFTAFCYLIASLGLQITWSFVL 60

Query: 61  AFIDAYALARNKALQSTILVSLFTVGDWITATLTLAAASASSGIAILYFNDLKSCSFIEE 120
           A IDAYAL RNKALQST+LVSLF VGDWITATLTLAAAS+SSG+AILYFNDLKSC+FI E
Sbjct: 61  ALIDAYALVRNKALQSTVLVSLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCNFIGE 120

Query: 121 CPKYQLSVALAFLCWITIATSSLIMGWLLASS 153
           C KYQLSVALAFL WITIATSSLIM W+LASS
Sbjct: 121 CQKYQLSVALAFLSWITIATSSLIMVWILASS 152

[Close]

BLAST of Tan0002180 vs. NCBI nr
Match: KAA0049263.1 (CASP-like protein 5B3 [Cucumis melo var. makuwa] >TYK17294.1 CASP-like protein 5B3 [Cucumis melo var. makuwa])

HSP 1 Score: 255.8 bits (652), Expect = 2.4e-64
Identity = 134/152 (88.16%), Postives = 140/152 (92.11%), Query Frame = 0


Query: 1   MKDFPGTPGTVTGLILRILQCVFAAGSIASMASTTYFFKFTAFCYLIASLGLQITWSFVL 60
           MKDFPGTPGT  GLILR+LQCVFAA SIASMAST YFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 1   MKDFPGTPGTAMGLILRVLQCVFAAASIASMASTAYFFKFTAFCYLIASLGLQITWSFVL 60

Query: 61  AFIDAYALARNKALQSTILVSLFTVGDWITATLTLAAASASSGIAILYFNDLKSCSFIEE 120
           A IDAYAL RNKALQST+LVSLF VGDWITATLTLAAAS+SSG+AILYFNDLKSC+FI E
Sbjct: 61  ALIDAYALVRNKALQSTVLVSLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCNFIGE 120

Query: 121 CPKYQLSVALAFLCWITIATSSLIMGWLLASS 153
           C KYQLSVALAFL WI IATSSLIM W+LASS
Sbjct: 121 CQKYQLSVALAFLSWIAIATSSLIMVWILASS 152

[Close]

BLAST of Tan0002180 vs. NCBI nr
Match: XP_022147696.1 (CASP-like protein 5B3 [Momordica charantia])

HSP 1 Score: 255.8 bits (652), Expect = 2.4e-64
Identity = 135/152 (88.82%), Postives = 140/152 (92.11%), Query Frame = 0


Query: 1   MKDFPGTPGTVTGLILRILQCVFAAGSIASMASTTYFFKFTAFCYLIASLGLQITWSFVL 60
           MKDFPGTPGT TGLILRILQCVFAAGSIASMAST+YFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 1   MKDFPGTPGTKTGLILRILQCVFAAGSIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60

Query: 61  AFIDAYALARNKALQSTILVSLFTVGDWITATLTLAAASASSGIAILYFNDLKSCSFIEE 120
           A ID YAL RNK LQS IL+SLF VGDWITATLTLAAASASSGIAILYFNDL+ C+FI E
Sbjct: 61  AIIDGYALVRNKVLQSPILISLFVVGDWITATLTLAAASASSGIAILYFNDLEGCNFIGE 120

Query: 121 CPKYQLSVALAFLCWITIATSSLIMGWLLASS 153
           C KYQLSVALAFL W+TIATSSLIM WLLASS
Sbjct: 121 CQKYQLSVALAFLSWVTIATSSLIMVWLLASS 152

[Close]

BLAST of Tan0002180 vs. ExPASy TrEMBL
Match: A0A0A0L4F6 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G135670 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.7e-66
Identity = 136/152 (89.47%), Postives = 143/152 (94.08%), Query Frame = 0


Query: 1   MKDFPGTPGTVTGLILRILQCVFAAGSIASMASTTYFFKFTAFCYLIASLGLQITWSFVL 60
           MKDFPGTPGTVTGLILRILQCVFAA S+ASMAST YFFKFTAFCYLIASLGLQITWSF+L
Sbjct: 1   MKDFPGTPGTVTGLILRILQCVFAAASVASMASTAYFFKFTAFCYLIASLGLQITWSFML 60

Query: 61  AFIDAYALARNKALQSTILVSLFTVGDWITATLTLAAASASSGIAILYFNDLKSCSFIEE 120
           A IDAYAL RNKALQST+LVSLF VGDWITATLTLAAAS+SSG+AILYFNDLKSC+FI E
Sbjct: 61  ALIDAYALVRNKALQSTVLVSLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCNFIGE 120

Query: 121 CPKYQLSVALAFLCWITIATSSLIMGWLLASS 153
           C KYQLSVALAFL WITIATSSLIM W+LASS
Sbjct: 121 CQKYQLSVALAFLSWITIATSSLIMVWILASS 152

[Close]

BLAST of Tan0002180 vs. ExPASy TrEMBL
Match: A0A1S3AXA2 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103483607 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.1e-65
Identity = 135/152 (88.82%), Postives = 141/152 (92.76%), Query Frame = 0


Query: 1   MKDFPGTPGTVTGLILRILQCVFAAGSIASMASTTYFFKFTAFCYLIASLGLQITWSFVL 60
           MKDFPGTPGT  GLILR+LQCVFAA SIASMAST YFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 1   MKDFPGTPGTAMGLILRVLQCVFAAASIASMASTAYFFKFTAFCYLIASLGLQITWSFVL 60

Query: 61  AFIDAYALARNKALQSTILVSLFTVGDWITATLTLAAASASSGIAILYFNDLKSCSFIEE 120
           A IDAYAL RNKALQST+LVSLF VGDWITATLTLAAAS+SSG+AILYFNDLKSC+FI E
Sbjct: 61  ALIDAYALVRNKALQSTVLVSLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCNFIGE 120

Query: 121 CPKYQLSVALAFLCWITIATSSLIMGWLLASS 153
           C KYQLSVALAFL WITIATSSLIM W+LASS
Sbjct: 121 CQKYQLSVALAFLSWITIATSSLIMVWILASS 152

[Close]

BLAST of Tan0002180 vs. ExPASy TrEMBL
Match: A0A5D3D223 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001480 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.2e-64
Identity = 134/152 (88.16%), Postives = 140/152 (92.11%), Query Frame = 0


Query: 1   MKDFPGTPGTVTGLILRILQCVFAAGSIASMASTTYFFKFTAFCYLIASLGLQITWSFVL 60
           MKDFPGTPGT  GLILR+LQCVFAA SIASMAST YFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 1   MKDFPGTPGTAMGLILRVLQCVFAAASIASMASTAYFFKFTAFCYLIASLGLQITWSFVL 60

Query: 61  AFIDAYALARNKALQSTILVSLFTVGDWITATLTLAAASASSGIAILYFNDLKSCSFIEE 120
           A IDAYAL RNKALQST+LVSLF VGDWITATLTLAAAS+SSG+AILYFNDLKSC+FI E
Sbjct: 61  ALIDAYALVRNKALQSTVLVSLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCNFIGE 120

Query: 121 CPKYQLSVALAFLCWITIATSSLIMGWLLASS 153
           C KYQLSVALAFL WI IATSSLIM W+LASS
Sbjct: 121 CQKYQLSVALAFLSWIAIATSSLIMVWILASS 152

[Close]

BLAST of Tan0002180 vs. ExPASy TrEMBL
Match: A0A6J1D351 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111016562 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.2e-64
Identity = 135/152 (88.82%), Postives = 140/152 (92.11%), Query Frame = 0


Query: 1   MKDFPGTPGTVTGLILRILQCVFAAGSIASMASTTYFFKFTAFCYLIASLGLQITWSFVL 60
           MKDFPGTPGT TGLILRILQCVFAAGSIASMAST+YFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 1   MKDFPGTPGTKTGLILRILQCVFAAGSIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60

Query: 61  AFIDAYALARNKALQSTILVSLFTVGDWITATLTLAAASASSGIAILYFNDLKSCSFIEE 120
           A ID YAL RNK LQS IL+SLF VGDWITATLTLAAASASSGIAILYFNDL+ C+FI E
Sbjct: 61  AIIDGYALVRNKVLQSPILISLFVVGDWITATLTLAAASASSGIAILYFNDLEGCNFIGE 120

Query: 121 CPKYQLSVALAFLCWITIATSSLIMGWLLASS 153
           C KYQLSVALAFL W+TIATSSLIM WLLASS
Sbjct: 121 CQKYQLSVALAFLSWVTIATSSLIMVWLLASS 152

[Close]

BLAST of Tan0002180 vs. ExPASy TrEMBL
Match: A0A6J1E906 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111431763 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 7.8e-61
Identity = 127/152 (83.55%), Postives = 138/152 (90.79%), Query Frame = 0


Query: 1   MKDFPGTPGTVTGLILRILQCVFAAGSIASMASTTYFFKFTAFCYLIASLGLQITWSFVL 60
           M+DFPG+PGTV GLILRILQ VFAA S+ASMAST YFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 25  MRDFPGSPGTVMGLILRILQFVFAAASVASMASTAYFFKFTAFCYLIASLGLQITWSFVL 84

Query: 61  AFIDAYALARNKALQSTILVSLFTVGDWITATLTLAAASASSGIAILYFNDLKSCSFIEE 120
           A IDAYAL +NKALQ+++L+SLF VGDWITATLTLAAAS+SSG+AILYFNDL  C FI E
Sbjct: 85  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLDICGFIGE 144

Query: 121 CPKYQLSVALAFLCWITIATSSLIMGWLLASS 153
           C KYQLSVALAFL WIT+ATSSLIM WLLASS
Sbjct: 145 CQKYQLSVALAFLSWITVATSSLIMVWLLASS 176

[Close]

BLAST of Tan0002180 vs. TAIR 10
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 203.0 bits (515), Expect = 1.7e-52
Identity = 105/152 (69.08%), Postives = 123/152 (80.92%), Query Frame = 0


Query: 1   MKDFPGTPGTVTGLILRILQCVFAAGSIASMASTTYFFKFTAFCYLIASLGLQITWSFVL 60
           M D PGTPGT+TGL+LRI QCVFAAGSI+ M ++  FF FTAFCYLIA++GLQ+ WSF L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 61  AFIDAYALARNKALQSTILVSLFTVGDWITATLTLAAASASSGIAILYFNDLKSCSFIEE 120
           A +D +AL R K L S +LVSLF VGDW+T+TL+LA AS+S+GI +LYF DL SCSF  E
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120

Query: 121 CPKYQLSVALAFLCWITIATSSLIMGWLLASS 153
           C KYQLSVALAFLCWITIA SSL   WLLAS+
Sbjct: 121 CWKYQLSVALAFLCWITIAVSSLTTLWLLASA 152

[Close]

BLAST of Tan0002180 vs. TAIR 10
Match: AT3G53850.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 151.4 bits (381), Expect = 6.0e-37
Identity = 85/153 (55.56%), Postives = 107/153 (69.93%), Query Frame = 0


Query: 1   MKDFPGTPGTVTGLILRILQCVFAAGSIASMASTTYFFKFTAFCYLIASLGLQITWSFVL 60
           MK   G PGTV GL+LRI QC  AA SI  M S   F   TAFCYLIAS+GLQ+ WSF L
Sbjct: 1   MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGL 60

Query: 61  AFIDAYALARNKALQSTILVSLFTVGDWITATLTLAAASASSGIAILYFNDLKSCSFIEE 120
           A +D YAL   K LQ+ ILVSLF VGDW+TA L+LAAA +S+G+ +LY  D+K C+   +
Sbjct: 61  ACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQ 120

Query: 121 --CPKYQLSVALAFLCWITIATSSLIMGWLLAS 152
             C +Y+++VAL+F+ WI IA SS +  W+LAS
Sbjct: 121 YPCLRYEVAVALSFVTWIQIAVSSHVTFWILAS 153

[Close]

BLAST of Tan0002180 vs. TAIR 10
Match: AT5G02060.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 139.0 bits (349), Expect = 3.1e-33
Identity = 76/151 (50.33%), Postives = 102/151 (67.55%), Query Frame = 0


Query: 1   MKDFPGTPGTVTGLILRILQCVFAAGSIASMASTTYFFKFTAFCYLIASLGLQITWSFVL 60
           MK   G+PGT++GLILR+ QC  AA SI  M S+  F  +TAFC+L+AS+GLQ+ WSF L
Sbjct: 1   MKKMIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGL 60

Query: 61  AFIDAYALARNKALQSTILVSLFTVGDWITATLTLAAASASSGIAILYFNDLKSC--SFI 120
           A +D YA+ R   L+S IL+SLFTVGDW+TA L LAAA +S+G+ +L+  D + C     
Sbjct: 61  ACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKDTEFCRQQPA 120

Query: 121 EECPKYQLSVALAFLCWITIATSSLIMGWLL 150
             C ++Q+SV L+F  W   A SS  M W+L
Sbjct: 121 LSCDRFQISVGLSFFNWFLAAISSHTMFWIL 151

[Close]

BLAST of Tan0002180 vs. TAIR 10
Match: AT2G28370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 132.5 bits (332), Expect = 2.9e-31
Identity = 75/151 (49.67%), Postives = 97/151 (64.24%), Query Frame = 0


Query: 1   MKDFPGTPGTVTGLILRILQCVFAAGSIASMASTTYFFKFTAFCYLIASLGLQITWSFVL 60
           M D  G PGT+ GL LR  Q +FAA ++  MAST+ F   TAFCYL+A+ GLQ  WS  L
Sbjct: 29  MDDMEGMPGTLLGLALRFFQFLFAAAALCVMASTSDFPSVTAFCYLVAATGLQSLWSLAL 88

Query: 61  AFIDAYALARNKALQSTILVSLFTVGDWITATLTLAAASASSGIAILYFNDLKSCSFIEE 120
           A +D YA+   ++LQ+  LVSLF +GD +T+TLT AAA AS+GI +L  NDL SC+    
Sbjct: 89  AMVDVYAIMVKRSLQNRRLVSLFAIGDGVTSTLTFAAACASAGITVLIDNDLNSCA-QNH 148

Query: 121 CPKYQLSVALAFLCWITIATSSLIMGWLLAS 152
           C +++ S ALAF+ W     S L   W LAS
Sbjct: 149 CVQFETSTALAFISWFAALPSFLFNFWSLAS 178

[Close]

BLAST of Tan0002180 vs. TAIR 10
Match: AT2G37200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 115.9 bits (289), Expect = 2.8e-26
Identity = 67/151 (44.37%), Postives = 98/151 (64.90%), Query Frame = 0


Query: 1   MKDFPGTPGTVTGLILRILQCVFAAGSIASMASTTYFFKFTAFCYLIASLGLQITWSFVL 60
           MKD  G PGT  GLILR+ Q V A  S++ M +T+ F   TAFC L+ ++ LQ  WS  L
Sbjct: 31  MKDVQGMPGTTGGLILRLSQFVPALISVSVMVTTSDFRSATAFCCLVLAVSLQSLWSLSL 90

Query: 61  AFIDAYALARNKALQSTILVSLFTVGDWITATLTLAAASASSGIAILYFNDLKSCSFIEE 120
             IDAYAL   ++L++  +V  FT+GD +T+TLT AAASAS+GI +L  NDL  C+ +  
Sbjct: 91  FIIDAYALLVRRSLRNHSVVQCFTIGDGVTSTLTFAAASASAGITVL-INDLGQCN-VNH 150

Query: 121 CPKYQLSVALAFLCWITIATSSLIMGWLLAS 152
           C +++ + A+AF+ W  ++ S ++  W LA+
Sbjct: 151 CTRFETATAMAFISWFAVSPSFILNFWSLAT 179

The following BLAST results are available for this feature:

BLAST of Tan0002180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7R5	2.4e-51	69.08	CASP-like protein 5B3 OS=Arabidopsis thaliana OX=3702 GN=At3g23200 PE=2 SV=1	[more]
B8BD96	7.6e-37	54.25	CASP-like protein 5B3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30532 PE=3 S...	[more]
Q6K478	7.6e-37	54.25	CASP-like protein 5B3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0249400 P...	[more]
Q945M8	8.4e-36	55.56	CASP-like protein 5B2 OS=Arabidopsis thaliana OX=3702 GN=At3g53850 PE=2 SV=1	[more]
D5ACW4	1.4e-35	54.97	CASP-like protein 5B1 (Fragment) OS=Picea sitchensis OX=3332 PE=2 SV=2	[more]

BLAST of Tan0002180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877372.1	5.7e-66	90.13	CASP-like protein 5B3 [Benincasa hispida]	[more]
XP_004134071.1	9.8e-66	89.47	CASP-like protein 5B3 [Cucumis sativus] >KGN56870.1 hypothetical protein Csa_011...	[more]
XP_008438541.1	6.3e-65	88.82	PREDICTED: CASP-like protein 5B3 [Cucumis melo]	[more]
KAA0049263.1	2.4e-64	88.16	CASP-like protein 5B3 [Cucumis melo var. makuwa] >TYK17294.1 CASP-like protein 5...	[more]
XP_022147696.1	2.4e-64	88.82	CASP-like protein 5B3 [Momordica charantia]	[more]

BLAST of Tan0002180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4F6	4.7e-66	89.47	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G135670 PE=3 SV=1	[more]
A0A1S3AXA2	3.1e-65	88.82	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103483607 PE=3 SV=1	[more]
A0A5D3D223	1.2e-64	88.16	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00...	[more]
A0A6J1D351	1.2e-64	88.82	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111016562 PE=3 SV=1	[more]
A0A6J1E906	7.8e-61	83.55	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111431763 PE=3 SV=1	[more]

BLAST of Tan0002180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23200.1	1.7e-52	69.08	Uncharacterised protein family (UPF0497)	[more]
AT3G53850.1	6.0e-37	55.56	Uncharacterised protein family (UPF0497)	[more]
AT5G02060.1	3.1e-33	50.33	Uncharacterised protein family (UPF0497)	[more]
AT2G28370.1	2.9e-31	49.67	Uncharacterised protein family (UPF0497)	[more]
AT2G37200.1	2.8e-26	44.37	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 7..136 e-value: 9.2E-22 score: 77.4
IPR045009	CASP-like protein 5	PANTHER	PTHR32021	CASP-LIKE PROTEIN 5B3	coord: 1..150
None	No IPR available	PANTHER	PTHR32021:SF5	CASP-LIKE PROTEIN 5B3	coord: 1..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0002180.1	Tan0002180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane