Tan0002041 (gene) Snake gourd v1

Overview


Name	Tan0002041
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Retrovirus-related Pol polyprotein from transposon RE1
Location	LG01: 102734017 .. 102734412 (+)
RNA-Seq Expression	Tan0002041
Synteny	Tan0002041

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTACTAGGACAAAGAGTGATATTTTTAAACCTAAGGCTTTACTAGCAGCCACTAATTTTGTTGAAACTAAACCTCGTAGTATTCAGGTAGCTTTAAAATGCCCTCATTGGCGTAAGACAATGCAAGAAGAGTATGATGCCTTACTTAAAAATAACACATGGGAGTTAGTATCAAGACCAGTGAGTCAGAAAGTAGTTGGTTGCAAGTGGGTATTCAAAATCAAAAGGAATTCTGATGGCACCATTAGTAGATATAAGGCTCGATTGGTTGCAAAGGGGTTTCACCAATCACCAGATATAGATTATTTTGAAACTTTTAGTCCCGTTGTGAAACCAATTACCATACGAATTCTACTCACCCTTGCCCTTGCTTTTAACTGGACTATTTGTTAG

mRNA sequence

ATGGTTACTAGGACAAAGAGTGATATTTTTAAACCTAAGGCTTTACTAGCAGCCACTAATTTTGTTGAAACTAAACCTCGTAGTATTCAGGTAGCTTTAAAATGCCCTCATTGGCGTAAGACAATGCAAGAAGAGTATGATGCCTTACTTAAAAATAACACATGGGAGTTAGTATCAAGACCAGTGAGTCAGAAAGTAGTTGGTTGCAAGTGGGTATTCAAAATCAAAAGGAATTCTGATGGCACCATTAGTAGATATAAGGCTCGATTGGTTGCAAAGGGGTTTCACCAATCACCAGATATAGATTATTTTGAAACTTTTAGTCCCGTTGTGAAACCAATTACCATACGAATTCTACTCACCCTTGCCCTTGCTTTTAACTGGACTATTTGTTAG

Coding sequence (CDS)

ATGGTTACTAGGACAAAGAGTGATATTTTTAAACCTAAGGCTTTACTAGCAGCCACTAATTTTGTTGAAACTAAACCTCGTAGTATTCAGGTAGCTTTAAAATGCCCTCATTGGCGTAAGACAATGCAAGAAGAGTATGATGCCTTACTTAAAAATAACACATGGGAGTTAGTATCAAGACCAGTGAGTCAGAAAGTAGTTGGTTGCAAGTGGGTATTCAAAATCAAAAGGAATTCTGATGGCACCATTAGTAGATATAAGGCTCGATTGGTTGCAAAGGGGTTTCACCAATCACCAGATATAGATTATTTTGAAACTTTTAGTCCCGTTGTGAAACCAATTACCATACGAATTCTACTCACCCTTGCCCTTGCTTTTAACTGGACTATTTGTTAG

Protein sequence

MVTRTKSDIFKPKALLAATNFVETKPRSIQVALKCPHWRKTMQEEYDALLKNNTWELVSRPVSQKVVGCKWVFKIKRNSDGTISRYKARLVAKGFHQSPDIDYFETFSPVVKPITIRILLTLALAFNWTIC

Homology

[Close]

BLAST of Tan0002041 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 9.2e-31
Identity = 68/125 (54.40%), Postives = 88/125 (70.40%), Query Frame = 0


Query: 1   MVTRTKSDIFK--PKALLAATNFVETKPRSIQVALKCPHWRKTMQEEYDALLKNNTWELV 60
           M+TR+K+ I K  PK  L  T  ++ +P+S+  ALK P W + MQEE DAL +N TW LV
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILV 60

Query: 61  SRPVSQKVVGCKWVFKIKRNSDGTISRYKARLVAKGFHQSPDIDYFETFSPVVKPITIRI 120
             PV+Q ++GCKWVFK K +SDGT+ R KARLVAKGFHQ   I + ET+SPVV+  TIR 
Sbjct: 61  PPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRT 120

Query: 121 LLTLA 124
           +L +A
Sbjct: 121 ILNVA 125

[Close]

BLAST of Tan0002041 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.3e-28
Identity = 66/133 (49.62%), Postives = 90/133 (67.67%), Query Frame = 0


Query: 1    MVTRTKSDIFK--PKALLAATNFVETKPRSIQVALKCPHWRKTMQEEYDALLKNNTWELV 60
            M TR K+ I K  PK  LA +   E++PR+   ALK   WR  M  E +A + N+TW+LV
Sbjct: 929  MGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLV 988

Query: 61   SRPVSQ-KVVGCKWVFKIKRNSDGTISRYKARLVAKGFHQSPDIDYFETFSPVVKPITIR 120
              P S   +VGC+W+F  K NSDG+++RYKARLVAKG++Q P +DY ETFSPV+K  +IR
Sbjct: 989  PPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIR 1048

Query: 121  ILLTLALAFNWTI 131
            I+L +A+  +W I
Sbjct: 1049 IVLGVAVDRSWPI 1061

[Close]

BLAST of Tan0002041 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.8e-26
Identity = 63/133 (47.37%), Postives = 88/133 (66.17%), Query Frame = 0


Query: 1    MVTRTKSDIFKP--KALLAATNFVETKPRSIQVALKCPHWRKTMQEEYDALLKNNTWELV 60
            M TR K  I KP  K   A +    ++PR+   A+K   WR+ M  E +A + N+TW+LV
Sbjct: 912  MATRAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLV 971

Query: 61   -SRPVSQKVVGCKWVFKIKRNSDGTISRYKARLVAKGFHQSPDIDYFETFSPVVKPITIR 120
               P S  +VGC+W+F  K NSDG+++RYKARLVAKG++Q P +DY ETFSPV+K  +IR
Sbjct: 972  PPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIR 1031

Query: 121  ILLTLALAFNWTI 131
            I+L +A+  +W I
Sbjct: 1032 IVLGVAVDRSWPI 1044

[Close]

BLAST of Tan0002041 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.8e-19
Identity = 49/108 (45.37%), Postives = 70/108 (64.81%), Query Frame = 0


Query: 23  ETKPRSIQVALKCP---HWRKTMQEEYDALLKNNTWELVSRPVSQKVVGCKWVFKIKRNS 82
           + +P S++  L  P      K MQEE ++L KN T++LV  P  ++ + CKWVFK+K++ 
Sbjct: 808 DREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDG 867

Query: 83  DGTISRYKARLVAKGFHQSPDIDYFETFSPVVKPITIRILLTLALAFN 128
           D  + RYKARLV KGF Q   ID+ E FSPVVK  +IR +L+LA + +
Sbjct: 868 DCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLD 915

[Close]

BLAST of Tan0002041 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 85.9 bits (211), Expect = 3.7e-16
Identity = 39/90 (43.33%), Postives = 56/90 (62.22%), Query Frame = 0


Query: 38  WRKTMQEEYDALLKNNTWELVSRPVSQKVVGCKWVFKIKRNSDGTISRYKARLVAKGFHQ 97
           W + +  E +A   NNTW +  RP ++ +V  +WVF +K N  G   RYKARLVA+GF Q
Sbjct: 906 WEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQ 965

Query: 98  SPDIDYFETFSPVVKPITIRILLTLALAFN 128
              IDY ETF+PV +  + R +L+L + +N
Sbjct: 966 KYQIDYEETFAPVARISSFRFILSLVIQYN 995

[Close]

BLAST of Tan0002041 vs. NCBI nr
Match: XP_016902739.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00820-like isoform X2 [Cucumis melo])

HSP 1 Score: 168.7 bits (426), Expect = 3.3e-38
Identity = 78/130 (60.00%), Postives = 104/130 (80.00%), Query Frame = 0


Query: 1   MVTRTKSDIFKPKALLAATNFVETKPRSIQVALKCPHWRKTMQEEYDALLKNNTWELVSR 60
           M+TR+K  IFKPKA L   ++ +T+P +++ A   PHW+K M+EE++AL KN+TW L S+
Sbjct: 84  MITRSKHGIFKPKAFL--IDYTQTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLTSQ 143

Query: 61  PVSQKVVGCKWVFKIKRNSDGTISRYKARLVAKGFHQSPDIDYFETFSPVVKPITIRILL 120
             +QK+VGCKWVFKIKRNS  +I+RYK RLVAK FHQ+P+IDY ETFSPVVKP+TIR+LL
Sbjct: 144 NPNQKIVGCKWVFKIKRNSYRSIARYKVRLVAKEFHQTPNIDYHETFSPVVKPVTIRMLL 203

Query: 121 TLALAFNWTI 131
           T+A+   W+I
Sbjct: 204 TIAIMKGWSI 211

[Close]

BLAST of Tan0002041 vs. NCBI nr
Match: XP_008461310.2 (PREDICTED: uncharacterized mitochondrial protein AtMg00820-like isoform X1 [Cucumis melo] >XP_016902737.1 PREDICTED: uncharacterized mitochondrial protein AtMg00820-like isoform X1 [Cucumis melo])

HSP 1 Score: 168.7 bits (426), Expect = 3.3e-38
Identity = 78/130 (60.00%), Postives = 104/130 (80.00%), Query Frame = 0


Query: 1   MVTRTKSDIFKPKALLAATNFVETKPRSIQVALKCPHWRKTMQEEYDALLKNNTWELVSR 60
           M+TR+K  IFKPKA L   ++ +T+P +++ A   PHW+K M+EE++AL KN+TW L S+
Sbjct: 85  MITRSKHGIFKPKAFL--IDYTQTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLTSQ 144

Query: 61  PVSQKVVGCKWVFKIKRNSDGTISRYKARLVAKGFHQSPDIDYFETFSPVVKPITIRILL 120
             +QK+VGCKWVFKIKRNS  +I+RYK RLVAK FHQ+P+IDY ETFSPVVKP+TIR+LL
Sbjct: 145 NPNQKIVGCKWVFKIKRNSYRSIARYKVRLVAKEFHQTPNIDYHETFSPVVKPVTIRMLL 204

Query: 121 TLALAFNWTI 131
           T+A+   W+I
Sbjct: 205 TIAIMKGWSI 212

[Close]

BLAST of Tan0002041 vs. NCBI nr
Match: KAA0035484.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK31041.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 168.7 bits (426), Expect = 3.3e-38
Identity = 78/130 (60.00%), Postives = 104/130 (80.00%), Query Frame = 0


Query: 1   MVTRTKSDIFKPKALLAATNFVETKPRSIQVALKCPHWRKTMQEEYDALLKNNTWELVSR 60
           M+TR+K  IFKPKA L   ++ +T+P +++ A   PHW+K M+EE++AL KN+TW L S+
Sbjct: 74  MITRSKHGIFKPKAFL--IDYTQTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLTSQ 133

Query: 61  PVSQKVVGCKWVFKIKRNSDGTISRYKARLVAKGFHQSPDIDYFETFSPVVKPITIRILL 120
             +QK+VGCKWVFKIKRNS  +I+RYK RLVAK FHQ+P+IDY ETFSPVVKP+TIR+LL
Sbjct: 134 NPNQKIVGCKWVFKIKRNSYRSIARYKVRLVAKEFHQTPNIDYHETFSPVVKPVTIRMLL 193

Query: 121 TLALAFNWTI 131
           T+A+   W+I
Sbjct: 194 TIAIMKGWSI 201

[Close]

BLAST of Tan0002041 vs. NCBI nr
Match: TYK18915.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 166.0 bits (419), Expect = 2.2e-37
Identity = 79/130 (60.77%), Postives = 102/130 (78.46%), Query Frame = 0


Query: 1   MVTRTKSDIFKPKALLAATNFVETKPRSIQVALKCPHWRKTMQEEYDALLKNNTWELVSR 60
           M+T++K DIFKPKA L   ++ +T+  + + A   PHW+K M+EE+ AL KN TW L+ +
Sbjct: 220 MITQSKHDIFKPKAFL--IDYTQTETCNAKEAFNHPHWKKAMEEEFKALQKNGTWSLIPQ 279

Query: 61  PVSQKVVGCKWVFKIKRNSDGTISRYKARLVAKGFHQSPDIDYFETFSPVVKPITIRILL 120
             +QK+VGCKWVFKIKRNS G+ISRYKARLVAKGFHQ+ +IDY ETFSPVVKPITIR+LL
Sbjct: 280 NPNQKIVGCKWVFKIKRNSYGSISRYKARLVAKGFHQTHNIDYNETFSPVVKPITIRMLL 339

Query: 121 TLALAFNWTI 131
           T+ +   W+I
Sbjct: 340 TITIMKGWSI 347

[Close]

BLAST of Tan0002041 vs. NCBI nr
Match: RVW84602.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])

HSP 1 Score: 163.7 bits (413), Expect = 1.1e-36
Identity = 75/133 (56.39%), Postives = 99/133 (74.44%), Query Frame = 0


Query: 1   MVTRTKSDIFKPKALLAATNFV---ETKPRSIQVALKCPHWRKTMQEEYDALLKNNTWEL 60
           M TR K+ IFKPK  L+ T  +     +P S + A+K P W++ M  E++AL+ N TW L
Sbjct: 443 MTTRAKNGIFKPKIFLSPTETIFHPLCEPNSFKEAVKVPEWQQAMHLEFEALMSNRTWVL 502

Query: 61  VSRPVSQKVVGCKWVFKIKRNSDGTISRYKARLVAKGFHQSPDIDYFETFSPVVKPITIR 120
           VS P +Q ++GC+WV+K+K   DGT+ RYKARLVAKGFHQ+PD DYFETFSPVVKP TIR
Sbjct: 503 VSPPPNQNIIGCRWVYKLKYKPDGTVERYKARLVAKGFHQTPDFDYFETFSPVVKPTTIR 562

Query: 121 ILLTLALAFNWTI 131
           ++L+LAL+ NW+I
Sbjct: 563 VVLSLALSKNWSI 575

[Close]

BLAST of Tan0002041 vs. ExPASy TrEMBL
Match: A0A1S3CEF5 (uncharacterized mitochondrial protein AtMg00820-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499934 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.6e-38
Identity = 78/130 (60.00%), Postives = 104/130 (80.00%), Query Frame = 0


Query: 1   MVTRTKSDIFKPKALLAATNFVETKPRSIQVALKCPHWRKTMQEEYDALLKNNTWELVSR 60
           M+TR+K  IFKPKA L   ++ +T+P +++ A   PHW+K M+EE++AL KN+TW L S+
Sbjct: 85  MITRSKHGIFKPKAFL--IDYTQTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLTSQ 144

Query: 61  PVSQKVVGCKWVFKIKRNSDGTISRYKARLVAKGFHQSPDIDYFETFSPVVKPITIRILL 120
             +QK+VGCKWVFKIKRNS  +I+RYK RLVAK FHQ+P+IDY ETFSPVVKP+TIR+LL
Sbjct: 145 NPNQKIVGCKWVFKIKRNSYRSIARYKVRLVAKEFHQTPNIDYHETFSPVVKPVTIRMLL 204

Query: 121 TLALAFNWTI 131
           T+A+   W+I
Sbjct: 205 TIAIMKGWSI 212

[Close]

BLAST of Tan0002041 vs. ExPASy TrEMBL
Match: A0A5A7SW14 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G002970 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.6e-38
Identity = 78/130 (60.00%), Postives = 104/130 (80.00%), Query Frame = 0


Query: 1   MVTRTKSDIFKPKALLAATNFVETKPRSIQVALKCPHWRKTMQEEYDALLKNNTWELVSR 60
           M+TR+K  IFKPKA L   ++ +T+P +++ A   PHW+K M+EE++AL KN+TW L S+
Sbjct: 74  MITRSKHGIFKPKAFL--IDYTQTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLTSQ 133

Query: 61  PVSQKVVGCKWVFKIKRNSDGTISRYKARLVAKGFHQSPDIDYFETFSPVVKPITIRILL 120
             +QK+VGCKWVFKIKRNS  +I+RYK RLVAK FHQ+P+IDY ETFSPVVKP+TIR+LL
Sbjct: 134 NPNQKIVGCKWVFKIKRNSYRSIARYKVRLVAKEFHQTPNIDYHETFSPVVKPVTIRMLL 193

Query: 121 TLALAFNWTI 131
           T+A+   W+I
Sbjct: 194 TIAIMKGWSI 201

[Close]

BLAST of Tan0002041 vs. ExPASy TrEMBL
Match: A0A1S4E3D4 (uncharacterized mitochondrial protein AtMg00820-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499934 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.6e-38
Identity = 78/130 (60.00%), Postives = 104/130 (80.00%), Query Frame = 0


Query: 1   MVTRTKSDIFKPKALLAATNFVETKPRSIQVALKCPHWRKTMQEEYDALLKNNTWELVSR 60
           M+TR+K  IFKPKA L   ++ +T+P +++ A   PHW+K M+EE++AL KN+TW L S+
Sbjct: 84  MITRSKHGIFKPKAFL--IDYTQTEPYNVKEAFNHPHWKKAMEEEFEALQKNDTWSLTSQ 143

Query: 61  PVSQKVVGCKWVFKIKRNSDGTISRYKARLVAKGFHQSPDIDYFETFSPVVKPITIRILL 120
             +QK+VGCKWVFKIKRNS  +I+RYK RLVAK FHQ+P+IDY ETFSPVVKP+TIR+LL
Sbjct: 144 NPNQKIVGCKWVFKIKRNSYRSIARYKVRLVAKEFHQTPNIDYHETFSPVVKPVTIRMLL 203

Query: 121 TLALAFNWTI 131
           T+A+   W+I
Sbjct: 204 TIAIMKGWSI 211

[Close]

BLAST of Tan0002041 vs. ExPASy TrEMBL
Match: A0A5D3D5W0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G001310 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.0e-37
Identity = 79/130 (60.77%), Postives = 102/130 (78.46%), Query Frame = 0


Query: 1   MVTRTKSDIFKPKALLAATNFVETKPRSIQVALKCPHWRKTMQEEYDALLKNNTWELVSR 60
           M+T++K DIFKPKA L   ++ +T+  + + A   PHW+K M+EE+ AL KN TW L+ +
Sbjct: 220 MITQSKHDIFKPKAFL--IDYTQTETCNAKEAFNHPHWKKAMEEEFKALQKNGTWSLIPQ 279

Query: 61  PVSQKVVGCKWVFKIKRNSDGTISRYKARLVAKGFHQSPDIDYFETFSPVVKPITIRILL 120
             +QK+VGCKWVFKIKRNS G+ISRYKARLVAKGFHQ+ +IDY ETFSPVVKPITIR+LL
Sbjct: 280 NPNQKIVGCKWVFKIKRNSYGSISRYKARLVAKGFHQTHNIDYNETFSPVVKPITIRMLL 339

Query: 121 TLALAFNWTI 131
           T+ +   W+I
Sbjct: 340 TITIMKGWSI 347

[Close]

BLAST of Tan0002041 vs. ExPASy TrEMBL
Match: A0A2N9FNX4 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16493 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.8e-37
Identity = 78/131 (59.54%), Postives = 100/131 (76.34%), Query Frame = 0


Query: 1   MVTRTKSDIFKPKALLAAT-NFVETKPRSIQVALKCPHWRKTMQEEYDALLKNNTWELVS 60
           MVTR++ +I+KPK LL AT +   ++P  +  ALK P WR TM EE+DAL++N TWELV 
Sbjct: 575 MVTRSQHNIYKPKQLLVATSSSASSEPSCVSQALKIPEWRATMSEEFDALIRNGTWELVP 634

Query: 61  RPVSQKVVGCKWVFKIKRNSDGTISRYKARLVAKGFHQSPDIDYFETFSPVVKPITIRIL 120
              +  ++GCKWVF+IKRN DG+ISRYKARLVAKGFHQ P +DY +TFSPVVKP TIR++
Sbjct: 635 SRPTFNLIGCKWVFRIKRNPDGSISRYKARLVAKGFHQRPGLDYTDTFSPVVKPTTIRVV 694

Query: 121 LTLALAFNWTI 131
           L LAL+  W +
Sbjct: 695 LCLALSRGWPL 705

[Close]

BLAST of Tan0002041 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 134.4 bits (337), Expect = 6.5e-32
Identity = 68/125 (54.40%), Postives = 88/125 (70.40%), Query Frame = 0


Query: 1   MVTRTKSDIFK--PKALLAATNFVETKPRSIQVALKCPHWRKTMQEEYDALLKNNTWELV 60
           M+TR+K+ I K  PK  L  T  ++ +P+S+  ALK P W + MQEE DAL +N TW LV
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILV 60

Query: 61  SRPVSQKVVGCKWVFKIKRNSDGTISRYKARLVAKGFHQSPDIDYFETFSPVVKPITIRI 120
             PV+Q ++GCKWVFK K +SDGT+ R KARLVAKGFHQ   I + ET+SPVV+  TIR 
Sbjct: 61  PPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRT 120

Query: 121 LLTLA 124
           +L +A
Sbjct: 121 ILNVA 125

[Close]

BLAST of Tan0002041 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 106.3 bits (264), Expect = 1.9e-23
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 0


Query: 38  WRKTMQEEYDALLKNNTWELVSRPVSQKVVGCKWVFKIKRNSDGTISRYKARLVAKGFHQ 97
           W   M +E  A+   +TWE+ + P ++K +GCKWV+KIK NSDGTI RYKARLVAKG+ Q
Sbjct: 98  WCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQ 157

Query: 98  SPDIDYFETFSPVVKPITIRILLTLALAFNWTI 131
              ID+ ETFSPV K  +++++L ++  +N+T+
Sbjct: 158 QEGIDFIETFSPVCKLTSVKLILAISAIYNFTL 190

The following BLAST results are available for this feature:

BLAST of Tan0002041 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92520	9.2e-31	54.40	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q94HW2	3.3e-28	49.62	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.8e-26	47.37	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	2.8e-19	45.37	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	3.7e-16	43.33	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Tan0002041 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902739.1	3.3e-38	60.00	PREDICTED: uncharacterized mitochondrial protein AtMg00820-like isoform X2 [Cucu...	[more]
XP_008461310.2	3.3e-38	60.00	PREDICTED: uncharacterized mitochondrial protein AtMg00820-like isoform X1 [Cucu...	[more]
KAA0035484.1	3.3e-38	60.00	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK31041.1 putative m...	[more]
TYK18915.1	2.2e-37	60.77	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
RVW84602.1	1.1e-36	56.39	Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]	[more]

BLAST of Tan0002041 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CEF5	1.6e-38	60.00	uncharacterized mitochondrial protein AtMg00820-like isoform X1 OS=Cucumis melo ...	[more]
A0A5A7SW14	1.6e-38	60.00	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S4E3D4	1.6e-38	60.00	uncharacterized mitochondrial protein AtMg00820-like isoform X2 OS=Cucumis melo ...	[more]
A0A5D3D5W0	1.0e-37	60.77	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A2N9FNX4	1.8e-37	59.54	CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1649...	[more]

BLAST of Tan0002041 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00820.1	6.5e-32	54.40	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
AT4G23160.1	1.9e-23	49.46	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 52..130 e-value: 7.2E-22 score: 78.2
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 8..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0002041.1	Tan0002041.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding