Tan0001980 (gene) Snake gourd v1

Overview
NameTan0001980
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Description40S ribosomal protein S9-2
LocationLG04: 9839210 .. 9841694 (+)
RNA-Seq ExpressionTan0001980
SyntenyTan0001980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCTGCCTCCACTTGGGCACTCTTCGTTTTCTTTGTTTAGGGCTTCCAATCGAGATCGCGGCAGGGGCTGAAGCCGTAGCAGAGAAGAAAACATGGTGCACGTCTCCTTCTACAGGAACTGTGAGTATACTTCACTTCAAAAACTTTCTGGAATTGCATATCCATGGTCATCTAATAGAGCCTTCAAAGATATATGCATATGCTTCATTTTAGTGCCCTCAAGGTTTGGATCTTCAATCTCTCGTTGTGTTTCGCGCATGTTAGGTTACCTGGATATTCTTAGGTTAGCTTATTAGAAATCATGGGGCCTCAAACTTTCCAGGATTGAATTTATGCTGGTTGACAATCTTTCCTGATACTTTTTTTTTCTTTCATAATTTTGTTCACTTCATTTTATGGAGATCAATATATGACATAGTAGTTCTTACGTTTAATTTTTTTAAAAAATGTCGTTTTACATAATGCCTGTTTCTTGGCGCTTTGCTGAGAGCCATGATTATTGAATAGTGGGTTTTGTCATTACATAGATGGGAAGACTTTCAAGAAACCACGACGTCCTTATGAGAAGGAGCGTCTCGATGCAGAACTTAAACTTGTAGGTGAATATGGACTTCGTTGTAAAAGGGAGCTATGGAGGGTTCAATATGCGCTGAGCCGAATCCGTAATAACGCAAGAATGCTTTTAACTCTTGATGAAAAAAATCCACGTAGGATTTTTGAGGGGGAGGCCCTGCTCAGGAGGATGAACAGGTACGGTCTTTTGGATGAGAGTCAAAACAAGCTCGATTACGTCTTGGCTCTGACTGTCGAGAATTTTCTTGAGCGTCGTCTCCAAACACTTGTATTCAAGTCTGGAATGGCAAAGTCTATTCACCATGCTAGAGTGCTTATCAGACAGAGGCATATAAGGTAGAGTGGCATCATTATTACTCTAGTTTCTTACTCAATCGGTGCATAACAATAACAATAACATTCTATTGTAATTGTTTTATTTAAAATGCCCCTAAACTACTTGGTTGGTTTCAATTTAGCTTTTCAGTTTGTTTTTTGAATATCTGACTGGGCAATTGAGATTTAGCTTTAGACATTTAGGGTTTAGGACAAAGAAGTTTTAGGGTTTAGGGCTAGGCCTTGGCAAATGATGAGGAATTGTTGGAAGAAAGTAGCAGATAATTTTGTGTATCATTATGGTATTGTGCTACTAGGTATGAATTCTGGTATTGGATGTTTCTAGTATGAACGAAAGGTTTTTTTAACCCGAGACAATGAAAGCCATAAGTGTTAATTAAACATTTGATACCAGGCATAATTGAAACCAGTCCTATACTTTAAGACTATTTTATATAATTTAGCATTCTTTATTGCATTAGCTGTTTTTATTTGTTTTTGCACCCTCTATGAGATTCTTTATGCCTGATGGTTAACTGTTGCAAGATCGTATTCGTTGCCTGAAAATTGGAAATTGTTATGCTTCCTGCAAATTTATGAGCATATTGTTGTTTTTTGTTTACTTCTATCCTCTACTTTATTAATATGTATGTTGGCTTTGGAGCATTTGTTGATAATGGCTTCATCTGTTACATTTGTCTGTCTTTTTAGGGTTGGAAGGCAGGTGGTTAACATCCCTTCTTTCATGGTGAGAGTCGATTCTCAAAAGCACATTGACTTCTCTCTCACTAGTCCATTTGGAGGTGGTCGCCCTGGAAGAGTAAAGAGAAGGAATCAGAAGGCAGCTGCCAAGAAGGCTGCTGGTGGAGATGGAGATGAAGAAGATGAGGATTGAGTTGTTGACTAAAAACTCATCATCTGAGATGGTAAAGATTACCCGAGGATCTCAGGTATCTGAGATTAATCTCGAGTCCTATGCCCTCCTCCACCTAAACCTTAGCTATCACTATTGATGAGAATGTTACATCTTTTAGAAGTTTTGCTTTAATTAATTTTCATTTAGAGCTCTTGTGTTCTTTGGTGGCGGGACTAGTTTAATTTTCAATTTTGGACAAATTTTCATGCCATGATAGGACTTCTTTACTAAAAATTCCTCTGCATCATGAATTTATTGTGTTGATTTGGTTGGAATCTGTTTGCTTGGCTTATATTAATTCAGGAATCTGATCCGTTTTAAGGTTTTGTGAATTGTGATCACTAGACCTATTTGTTCTTGAAGTCGAGATATATTTCCAAGCGATGGAAGGTAGATGATGAGGGGGTTTTTAGGCCTTGATGGATATCATTGTACGTTAAGTTTTATAATTTAATCAACGTTAACATTCGTAGTTTAGTGTTACAAATGCCGATCATATTTATTCTTATCACCCTGGCTTAATGGATACGTAAATAAATGAACACTTTGATTCATCGAGAATGGATTCGTCAGTTTCGCATGATATATGATGAAAAAATGATTCTGTGAGCTGTCAAAGTCGTTATTGTACTCTGATGATGGAATATTATGTCTATGCTACGATTGGATTATGGATGGCCC

mRNA sequence

ACCTGCCTCCACTTGGGCACTCTTCGTTTTCTTTGTTTAGGGCTTCCAATCGAGATCGCGGCAGGGGCTGAAGCCGTAGCAGAGAAGAAAACATGGTGCACGTCTCCTTCTACAGGAACTATGGGAAGACTTTCAAGAAACCACGACGTCCTTATGAGAAGGAGCGTCTCGATGCAGAACTTAAACTTGTAGGTGAATATGGACTTCGTTGTAAAAGGGAGCTATGGAGGGTTCAATATGCGCTGAGCCGAATCCGTAATAACGCAAGAATGCTTTTAACTCTTGATGAAAAAAATCCACGTAGGATTTTTGAGGGGGAGGCCCTGCTCAGGAGGATGAACAGGTACGGTCTTTTGGATGAGAGTCAAAACAAGCTCGATTACGTCTTGGCTCTGACTGTCGAGAATTTTCTTGAGCGTCGTCTCCAAACACTTGTATTCAAGTCTGGAATGGCAAAGTCTATTCACCATGCTAGAGTGCTTATCAGACAGAGGCATATAAGGGTTGGAAGGCAGGTGGTTAACATCCCTTCTTTCATGGTGAGAGTCGATTCTCAAAAGCACATTGACTTCTCTCTCACTAGTCCATTTGGAGGTGGTCGCCCTGGAAGAGTAAAGAGAAGGAATCAGAAGGCAGCTGCCAAGAAGGCTGCTGGTGGAGATGGAGATGAAGAAGATGAGGATTGAGTTGTTGACTAAAAACTCATCATCTGAGATGGTAAAGATTACCCGAGGATCTCAGGTATCTGAGATTAATCTCGAGTCCTATGCCCTCCTCCACCTAAACCTTAGCTATCACTATTGATGAGAATGTTACATCTTTTAGAAGTTTTGCTTTAATTAATTTTCATTTAGAGCTCTTGTGTTCTTTGGTGGCGGGACTAGTTTAATTTTCAATTTTGGACAAATTTTCATGCCATGATAGGACTTCTTTACTAAAAATTCCTCTGCATCATGAATTTATTGTGTTGATTTGGTTGGAATCTGTTTGCTTGGCTTATATTAATTCAGGAATCTGATCCGTTTTAAGGTTTTGTGAATTGTGATCACTAGACCTATTTGTTCTTGAAGTCGAGATATATTTCCAAGCGATGGAAGGTAGATGATGAGGGGGTTTTTAGGCCTTGATGGATATCATTGTACGTTAAGTTTTATAATTTAATCAACGTTAACATTCGTAGTTTAGTGTTACAAATGCCGATCATATTTATTCTTATCACCCTGGCTTAATGGATACGTAAATAAATGAACACTTTGATTCATCGAGAATGGATTCGTCAGTTTCGCATGATATATGATGAAAAAATGATTCTGTGAGCTGTCAAAGTCGTTATTGTACTCTGATGATGGAATATTATGTCTATGCTACGATTGGATTATGGATGGCCC

Coding sequence (CDS)

ATGGTGCACGTCTCCTTCTACAGGAACTATGGGAAGACTTTCAAGAAACCACGACGTCCTTATGAGAAGGAGCGTCTCGATGCAGAACTTAAACTTGTAGGTGAATATGGACTTCGTTGTAAAAGGGAGCTATGGAGGGTTCAATATGCGCTGAGCCGAATCCGTAATAACGCAAGAATGCTTTTAACTCTTGATGAAAAAAATCCACGTAGGATTTTTGAGGGGGAGGCCCTGCTCAGGAGGATGAACAGGTACGGTCTTTTGGATGAGAGTCAAAACAAGCTCGATTACGTCTTGGCTCTGACTGTCGAGAATTTTCTTGAGCGTCGTCTCCAAACACTTGTATTCAAGTCTGGAATGGCAAAGTCTATTCACCATGCTAGAGTGCTTATCAGACAGAGGCATATAAGGGTTGGAAGGCAGGTGGTTAACATCCCTTCTTTCATGGTGAGAGTCGATTCTCAAAAGCACATTGACTTCTCTCTCACTAGTCCATTTGGAGGTGGTCGCCCTGGAAGAGTAAAGAGAAGGAATCAGAAGGCAGCTGCCAAGAAGGCTGCTGGTGGAGATGGAGATGAAGAAGATGAGGATTGA

Protein sequence

MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQKAAAKKAAGGDGDEEDED
Homology
[Close]
BLAST of Tan0001980 vs. ExPASy Swiss-Prot
Match: Q9FLF0 (40S ribosomal protein S9-2 OS=Arabidopsis thaliana OX=3702 GN=RPS9C PE=1 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 4.1e-99
Identity = 181/197 (91.88%), Postives = 192/197 (97.46%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MV+V FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQY LSRIRN AR 
Sbjct: 1   MVNVRFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYTLSRIRNAARE 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDE+QNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHHARVLIRQRHIRVGRQ+VNIPSFMVRV+SQKH+DFSLTSPFGGGRPGRVKRRN++
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQLVNIPSFMVRVESQKHVDFSLTSPFGGGRPGRVKRRNER 180

Query: 181 AAAKKAAGGDGDEEDED 198
           A AKKA+GGDGDE+DE+
Sbjct: 181 AGAKKASGGDGDEDDEE 197

[Close]
BLAST of Tan0001980 vs. ExPASy Swiss-Prot
Match: Q9LXG1 (40S ribosomal protein S9-1 OS=Arabidopsis thaliana OX=3702 GN=RPS9B PE=1 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 2.0e-93
Identity = 174/198 (87.88%), Postives = 190/198 (95.96%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHV +YRNYGKTFK PRRPYEKERLD+ELKLVGEYGLR KRELWRVQY+LSRIRN AR 
Sbjct: 1   MVHVCYYRNYGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEK+PRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHH+RVLIRQRHIRVG+Q+VNIPSFMVR+DSQKHIDF+LTSPFGGGRPGRVKRRN+K
Sbjct: 121 AKSIHHSRVLIRQRHIRVGKQLVNIPSFMVRLDSQKHIDFALTSPFGGGRPGRVKRRNEK 180

Query: 181 AAAKKAAGG---DGDEED 196
           +A+KKA+GG   DGD+E+
Sbjct: 181 SASKKASGGGDADGDDEE 198

[Close]
BLAST of Tan0001980 vs. ExPASy Swiss-Prot
Match: P52810 (40S ribosomal protein S9 OS=Podospora anserina OX=2587412 GN=RPS9 PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 6.1e-71
Identity = 140/191 (73.30%), Postives = 164/191 (85.86%), Query Frame = 0 

Query: 8   RNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEK 67
           R+Y KT K PRRP+E  RLD+ELKLVGEYGLR KRE+WRV   LS+IR  AR LLTLDEK
Sbjct: 4   RSYSKTAKVPRRPFEAARLDSELKLVGEYGLRNKREVWRVLLTLSKIRRAARELLTLDEK 63

Query: 68  NPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHA 127
           +P+R+FEG AL+RR+ R G+LDES+ KLDYVLAL  E+FLERRLQTLV+K G+AKSIHHA
Sbjct: 64  DPKRLFEGNALIRRLVRVGVLDESRMKLDYVLALKAEDFLERRLQTLVYKLGLAKSIHHA 123

Query: 128 RVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQKAAAKKAA 187
           RVLIRQRHIRVG+Q+VN+PSF+VR+DSQKHIDF+LTSPFGGGRPGRV+R+     AK A 
Sbjct: 124 RVLIRQRHIRVGKQIVNVPSFVVRLDSQKHIDFALTSPFGGGRPGRVRRKK----AKAAE 183

Query: 188 GGDGD-EEDED 198
           GGDGD EEDE+
Sbjct: 184 GGDGDAEEDEE 190

[Close]
BLAST of Tan0001980 vs. ExPASy Swiss-Prot
Match: A6QLG5 (40S ribosomal protein S9 OS=Bos taurus OX=9913 GN=RPS9 PE=2 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 5.7e-69
Identity = 132/184 (71.74%), Postives = 155/184 (84.24%), Query Frame = 0 

Query: 12  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRR 71
           KT+  PRRP+EK RLD ELKL+GEYGLR KRE+WRV++ L++IR  AR LLTLDEK+PRR
Sbjct: 11  KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70

Query: 72  IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLI 131
           +FEG ALLRR+ R G+LDE + KLDY+L L +E+FLERRLQT VFK G+AKSIHHARVLI
Sbjct: 71  LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130

Query: 132 RQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQKAAAKKAAGGDG 191
           RQRHIRV +QVVNIPSF+VR+DSQKHIDFSL SP+GGGRPGRVKR+N K     A  GD 
Sbjct: 131 RQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDD 190

Query: 192 DEED 196
           +EED
Sbjct: 191 EEED 194

[Close]
BLAST of Tan0001980 vs. ExPASy Swiss-Prot
Match: P46781 (40S ribosomal protein S9 OS=Homo sapiens OX=9606 GN=RPS9 PE=1 SV=3)

HSP 1 Score: 261.9 bits (668), Expect = 5.7e-69
Identity = 132/184 (71.74%), Postives = 155/184 (84.24%), Query Frame = 0 

Query: 12  KTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRR 71
           KT+  PRRP+EK RLD ELKL+GEYGLR KRE+WRV++ L++IR  AR LLTLDEK+PRR
Sbjct: 11  KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 70

Query: 72  IFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLI 131
           +FEG ALLRR+ R G+LDE + KLDY+L L +E+FLERRLQT VFK G+AKSIHHARVLI
Sbjct: 71  LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLI 130

Query: 132 RQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQKAAAKKAAGGDG 191
           RQRHIRV +QVVNIPSF+VR+DSQKHIDFSL SP+GGGRPGRVKR+N K     A  GD 
Sbjct: 131 RQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDD 190

Query: 192 DEED 196
           +EED
Sbjct: 191 EEED 194

[Close]
BLAST of Tan0001980 vs. NCBI nr
Match: XP_024018555.1 (40S ribosomal protein S9-2 [Morus notabilis] >PON71929.1 Ribosomal protein [Parasponia andersonii] >PON83707.1 Ribosomal protein [Trema orientale])

HSP 1 Score: 386.7 bits (992), Expect = 1.2e-103
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of Tan0001980 vs. NCBI nr
Match: XP_022944955.1 (40S ribosomal protein S9-2 [Cucurbita moschata] >XP_022968439.1 40S ribosomal protein S9-2 [Cucurbita maxima] >XP_022973398.1 40S ribosomal protein S9-2 [Cucurbita maxima] >XP_023525066.1 40S ribosomal protein S9-2 [Cucurbita pepo subsp. pepo] >XP_023541316.1 40S ribosomal protein S9-2 [Cucurbita pepo subsp. pepo] >KAG6574094.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013152.1 40S ribosomal protein S9-2 [Cucurbita argyrosperma subsp. argyrosperma] >KAG6607518.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 385.6 bits (989), Expect = 2.6e-103
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHHARVLIRQ+HIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of Tan0001980 vs. NCBI nr
Match: XP_022142910.1 (40S ribosomal protein S9-2 [Momordica charantia] >XP_022151237.1 40S ribosomal protein S9-2 [Momordica charantia] >XP_038893425.1 40S ribosomal protein S9-2 [Benincasa hispida])

HSP 1 Score: 385.6 bits (989), Expect = 2.6e-103
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKR+NQK
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of Tan0001980 vs. NCBI nr
Match: KAF3437759.1 (hypothetical protein FNV43_RR20515 [Rhamnella rubrinervis])

HSP 1 Score: 385.2 bits (988), Expect = 3.4e-103
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDE+
Sbjct: 181 AAAKKAAGGDGDEEDEE 197

[Close]
BLAST of Tan0001980 vs. NCBI nr
Match: KAF3444781.1 (hypothetical protein FNV43_RR14474 [Rhamnella rubrinervis])

HSP 1 Score: 384.4 bits (986), Expect = 5.8e-103
Identity = 195/197 (98.98%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLD+ELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDSELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHHARVLIRQRHIRVGRQVVNIPSF+VRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFLVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of Tan0001980 vs. ExPASy TrEMBL
Match: A0A2P5DF58 (Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_067710 PE=3 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 5.7e-104
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of Tan0001980 vs. ExPASy TrEMBL
Match: A0A2P5EDU1 (Ribosomal protein OS=Trema orientale OX=63057 GN=TorRG33x02_205130 PE=3 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 5.7e-104
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of Tan0001980 vs. ExPASy TrEMBL
Match: A0A6J1HZN1 (40S ribosomal protein S9-2 OS=Cucurbita maxima OX=3661 GN=LOC111467686 PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.3e-103
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHHARVLIRQ+HIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of Tan0001980 vs. ExPASy TrEMBL
Match: A0A6J1DCX8 (40S ribosomal protein S9-2 OS=Momordica charantia OX=3673 GN=LOC111019211 PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.3e-103
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKR+NQK
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of Tan0001980 vs. ExPASy TrEMBL
Match: A0A6J1FZI5 (40S ribosomal protein S9-2 OS=Cucurbita moschata OX=3662 GN=LOC111449338 PE=3 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.3e-103
Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM
Sbjct: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHHARVLIRQ+HIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK
Sbjct: 121 AKSIHHARVLIRQKHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180

Query: 181 AAAKKAAGGDGDEEDED 198
           AAAKKAAGGDGDEEDED
Sbjct: 181 AAAKKAAGGDGDEEDED 197

[Close]
BLAST of Tan0001980 vs. TAIR 10
Match: AT5G39850.1 (Ribosomal protein S4 )

HSP 1 Score: 362.1 bits (928), Expect = 2.9e-100
Identity = 181/197 (91.88%), Postives = 192/197 (97.46%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MV+V FYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQY LSRIRN AR 
Sbjct: 1   MVNVRFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYTLSRIRNAARE 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEKNPRRIFEGEALLRRMNRYGLLDE+QNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDETQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHHARVLIRQRHIRVGRQ+VNIPSFMVRV+SQKH+DFSLTSPFGGGRPGRVKRRN++
Sbjct: 121 AKSIHHARVLIRQRHIRVGRQLVNIPSFMVRVESQKHVDFSLTSPFGGGRPGRVKRRNER 180

Query: 181 AAAKKAAGGDGDEEDED 198
           A AKKA+GGDGDE+DE+
Sbjct: 181 AGAKKASGGDGDEDDEE 197

[Close]
BLAST of Tan0001980 vs. TAIR 10
Match: AT5G15200.1 (Ribosomal protein S4 )

HSP 1 Score: 343.2 bits (879), Expect = 1.4e-94
Identity = 174/198 (87.88%), Postives = 190/198 (95.96%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHV +YRNYGKTFK PRRPYEKERLD+ELKLVGEYGLR KRELWRVQY+LSRIRN AR 
Sbjct: 1   MVHVCYYRNYGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEK+PRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRRNQK 180
           AKSIHH+RVLIRQRHIRVG+Q+VNIPSFMVR+DSQKHIDF+LTSPFGGGRPGRVKRRN+K
Sbjct: 121 AKSIHHSRVLIRQRHIRVGKQLVNIPSFMVRLDSQKHIDFALTSPFGGGRPGRVKRRNEK 180

Query: 181 AAAKKAAGG---DGDEED 196
           +A+KKA+GG   DGD+E+
Sbjct: 181 SASKKASGGGDADGDDEE 198

[Close]
BLAST of Tan0001980 vs. TAIR 10
Match: AT5G15200.2 (Ribosomal protein S4 )

HSP 1 Score: 250.4 bits (638), Expect = 1.2e-66
Identity = 126/137 (91.97%), Postives = 132/137 (96.35%), Query Frame = 0 

Query: 1   MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARM 60
           MVHV +YRNYGKTFK PRRPYEKERLD+ELKLVGEYGLR KRELWRVQY+LSRIRN AR 
Sbjct: 1   MVHVCYYRNYGKTFKGPRRPYEKERLDSELKLVGEYGLRNKRELWRVQYSLSRIRNAARD 60

Query: 61  LLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGM 120
           LLTLDEK+PRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQT+VFKSGM
Sbjct: 61  LLTLDEKSPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTIVFKSGM 120

Query: 121 AKSIHHARVLIRQRHIR 138
           AKSIHH+RVLIRQRHIR
Sbjct: 121 AKSIHHSRVLIRQRHIR 137

[Close]
BLAST of Tan0001980 vs. TAIR 10
Match: AT5G15750.1 (Alpha-L RNA-binding motif/Ribosomal protein S4 family protein )

HSP 1 Score: 42.0 bits (97), Expect = 6.6e-04
Identity = 29/130 (22.31%), Postives = 61/130 (46.92%), Query Frame = 0 

Query: 21  YEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLR 80
           +++E    E ++   Y +  + +  +       ++    ++  +D  +P RI   + LL 
Sbjct: 20  WKREGNHRENEITYRYHMGSRDDYKKYSGLCRMVQKLTNIMKQMDPADPFRIQMTDMLLE 79

Query: 81  RMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGR 140
           ++   G++  ++  L     L+V +F  RRL T++     A+    A   I Q H+RVG 
Sbjct: 80  KLYNMGVI-PTRKSLTLTERLSVSSFCRRRLSTVLVHLKFAEHHKEAVTYIEQGHVRVGP 139

Query: 141 QVVNIPSFMV 151
           + +  P+F+V
Sbjct: 140 ETITDPAFLV 148

The following BLAST results are available for this feature:
BLAST of Tan0001980 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FLF04.1e-9991.8840S ribosomal protein S9-2 OS=Arabidopsis thaliana OX=3702 GN=RPS9C PE=1 SV=1[more]
Q9LXG12.0e-9387.8840S ribosomal protein S9-1 OS=Arabidopsis thaliana OX=3702 GN=RPS9B PE=1 SV=1[more]
P528106.1e-7173.3040S ribosomal protein S9 OS=Podospora anserina OX=2587412 GN=RPS9 PE=3 SV=1[more]
A6QLG55.7e-6971.7440S ribosomal protein S9 OS=Bos taurus OX=9913 GN=RPS9 PE=2 SV=1[more]
P467815.7e-6971.7440S ribosomal protein S9 OS=Homo sapiens OX=9606 GN=RPS9 PE=1 SV=3[more]
BLAST of Tan0001980 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_024018555.11.2e-103100.0040S ribosomal protein S9-2 [Morus notabilis] >PON71929.1 Ribosomal protein [Para... [more]
XP_022944955.12.6e-10399.4940S ribosomal protein S9-2 [Cucurbita moschata] >XP_022968439.1 40S ribosomal pr... [more]
XP_022142910.12.6e-10399.4940S ribosomal protein S9-2 [Momordica charantia] >XP_022151237.1 40S ribosomal p... [more]
KAF3437759.13.4e-10399.49hypothetical protein FNV43_RR20515 [Rhamnella rubrinervis][more]
KAF3444781.15.8e-10398.98hypothetical protein FNV43_RR14474 [Rhamnella rubrinervis][more]
BLAST of Tan0001980 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2P5DF585.7e-104100.00Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_067710 PE=3 SV=... [more]
A0A2P5EDU15.7e-104100.00Ribosomal protein OS=Trema orientale OX=63057 GN=TorRG33x02_205130 PE=3 SV=1[more]
A0A6J1HZN11.3e-10399.4940S ribosomal protein S9-2 OS=Cucurbita maxima OX=3661 GN=LOC111467686 PE=3 SV=1[more]
A0A6J1DCX81.3e-10399.4940S ribosomal protein S9-2 OS=Momordica charantia OX=3673 GN=LOC111019211 PE=3 S... [more]
A0A6J1FZI51.3e-10399.4940S ribosomal protein S9-2 OS=Cucurbita moschata OX=3662 GN=LOC111449338 PE=3 SV... [more]
BLAST of Tan0001980 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G39850.12.9e-10091.88Ribosomal protein S4 [more]
AT5G15200.11.4e-9487.88Ribosomal protein S4 [more]
AT5G15200.21.2e-6691.97Ribosomal protein S4 [more]
AT5G15750.16.6e-0422.31Alpha-L RNA-binding motif/Ribosomal protein S4 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001912Ribosomal protein S4/S9, N-terminalSMARTSM01390Ribosomal_S4_2coord: 8..108
e-value: 6.8E-25
score: 98.7
IPR001912Ribosomal protein S4/S9, N-terminalPFAMPF00163Ribosomal_S4coord: 15..64
e-value: 1.4E-6
score: 29.1
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 109..180
e-value: 3.1E-5
score: 33.4
IPR002942RNA-binding S4 domainPFAMPF01479S4coord: 109..152
e-value: 3.0E-13
score: 49.2
IPR002942RNA-binding S4 domainCDDcd00165S4coord: 109..153
e-value: 4.55727E-9
score: 49.1702
IPR005710Ribosomal protein S4/S9, eukaryotic/archaealTIGRFAMTIGR01018TIGR01018coord: 11..166
e-value: 9.9E-65
score: 215.4
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 108..165
e-value: 1.8E-14
score: 55.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..197
NoneNo IPR availablePANTHERPTHR11831:SF3440S RIBOSOMAL PROTEIN S9-2-LIKEcoord: 5..197
NoneNo IPR availablePROSITEPS50889S4coord: 109..180
score: 10.948408
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 12..159
IPR022801Ribosomal protein S4/S9PANTHERPTHR1183130S 40S RIBOSOMAL PROTEINcoord: 5..197
IPR018079Ribosomal protein S4, conserved sitePROSITEPS00632RIBOSOMAL_S4coord: 107..131

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0001980.1Tan0001980.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045903 positive regulation of translational fidelity
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding