Tan0001930 (gene) Snake gourd v1

Overview
NameTan0001930
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionstress-associated endoplasmic reticulum protein 2-like
LocationLG10: 19520177 .. 19523611 (-)
RNA-Seq ExpressionTan0001930
SyntenyTan0001930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCAATATAACGTGCCGAAAAACAGCCAGGAAAAAATAAACATAAAATCCTGATTTGAAGTTTGAACAGGCAGACATAAATCTGAAGAATTCGCCTCCATCTCTCTTCTCCAATTCGTTTCCGCCTCCCAGATCTCCCTCTCACAAATGGTAATTTGCTTTTCTCCTCGAAATCGTTCTTCTTCCTTCCCCCTCGATTCTATTATTTTCCCTCTAGGGTTTTATTTTTCAGATTTCCATCTATGGTTTGATATTTGGATTTCGTTTGCGGATGGATTAGATTTCATGTAATTGCCTTTGTCTATTTGTCGATTTATGATTTTGATTTGATGGGAATTTTGCAGACGACATCACGGCGTCTTGCGGATCGGAAGGTGGAGCGGTTCGAGAAGAACATTTTGAAGAGAGGGGCCGTGCCCGAGACTGCCACGAAGAAGGGAAAGGACTACCCGGTTGGCCCTCTTCTTCTTGGATTCTTCGTTTTTGTCGTCATTGGATCATGTGAGTTTTTCCCTTTTCCACCCTCTTTCATCTCGATTTCTGTTTTGTGATTCGAGTTTTTGTGCGGTTGTTTATAAGAATATATATATGTTAAAGAATTAAATGTACCTTAATCTATCCGAGAAGAACACGATCTCTAGCTCCTCTCTTCAAATTCCTGTGAAGACCCAAATTGAAAGTTTGAGAATATATGCTGTAACGTTTGTTTGTAATGGTGGGTCGAAAGAATCTTGGTAGCTACCAATCCGTCCATTTTTTCTCGGATTTCCATGATGCGTCTTGTTGAAGGGAGCGCAGAATAAGTCCATAATTGTCCAGTATTCGATTTTATTGATATTATTCTGGTTCAACAGAGGGCATCTGAAAATTTCTATGAATGGTTTAACATATTCAAAATTTGAATGATTATTGCTGAGGTTTCCTACCCAGTAGAAGCTTCTGTGACTTTATTTTCATCAATGAAGTGTATATTTGGGAGTTAATGGTTGAGTTCCTGTGGGCTGATGATCTTTTGTTCCATTGTTTGAATTGTGCAGCTCTGTTTCAGATAATCAGGACGGCTACAGGTGGAGGAATGGCTTGAGCCATCTTCAGTTCTGAGGGGTAGCAGAGGCAGGACATGAGGTTAAAACTTCTTGTGCTATTTGTTATTCCTCTCTGTGTCTGTGTCTGTGTCTGTGCTACCCTGTAGGAGGAGAAGCTTGGTAGTGTAGAGAAAGTAAAGACCATTTATGGTCGTCCTCTGAAGTACTTATTAAAAAAGTAATTTAAATAACAGTGTGCACATCTACAAGTGCTATGCTATCCTATATCTAATTATTCATTGTTCTCATGATCTCTTTAACTCCTAACGTGCACTTTAAAACTTTTTAAATGTGAGTTTGGAATAACTTTTTTTTATAAAACGGTTGTAAGTGTAAGTATCCTTTTTTATAAGCACTTATAGCTTAAAAACACTTTTTACCTTTCTCATTCCGAACCCAACCCAAGAATCTCATAAGAAAATTATCCCACATTAGCATGCATTTGTAGAGCTTTCAATTATGAACCAATGGAAAAAACAATTCTCCTCGCATGTCATGCCCACTCCACTGTTTTATACGCATTTGTCCGAATGGTTTGCTTAATATGATCTTGGAAAAGAGATTAAATAAAGTTCGAAATTGTAAAACCTTACTTGAATAAGATCGGTTCTATAGGTTGTACGACTCTGCCCTTGAGTTCTAATAAAGTTCAAAACTGTGGTATGAAGCATTTTCTACTGTTTGTTTGCACAAATTTCAAGTTACATCAGTTGCTAGGCATAAAAATAAAGAGGTTCAGCGTTTCTTTATATCATTTGGAAAGATTATTCTGTTTATTTAACTTCAACACACAATTGTTATACTTGTATTTAGGATCAATATAGGAGGAGGAAGGGTATGTGCTCCATCTTCTTGTTTTTCTTTTTCGAGTTTGAGTGGGGAAACGGATCAGAGGTGCTTTATATACTGAGCTGTTGCTCGAATTGGATAAATAGAAGAAATAATCTTATTAGTATTCTTCTTAGGCTTTATAATCATTACATTAAAGCTTTAAATACAATACCTATCACAACATAATCCCTCCAAACATATATTTGGTTCAGAATTCATGCTTATTTAGCAAAGAATCAAACATAAGTTAGATCATTAAGATCCCACTTATCGTAGCTTTTTGAATCTGTAAAGTTGGTGGAGAATAGGTAGAGTTCTCCATGAACAGCTTCTTTGCATTCTCTATTGGTTTAGAAGAGGAACAAATTCTTGGTCAGTACAAACTGTGTGCTTTTTGTAGCTTTAGAGTCCATCCACTGCTTTCTTAGATTAGAGGGGCCTTCATTTGTTTTCTATTAAAAGAAAGAAGAGAAAAATAACGATCTTTAGGTCCCAACATGGATCCTTTGGCTTATTTGTTATGCGTCTAGTCTTTGAAGTTTTGGTCACAAACTATTTTGTTAGTTGAAGTTTTACAAGGGTTTAACCATTCATCTATTTGAGCTTGTGGCTGAGATAATTCGTTCTTTTTCAAGCAAGAGATTTCATGCAGGACCAATTGAAAGTCCTCCCTTTTGATTGCTCAAAATCCACCATTTATAGTCATAGAATGAATGGAACTACAAATTTTGAACTTAGTATATTGATTCATTAAAATCCTAAACTTGTTTGTTAGTTAAAATGGGGTTGAGGGCAGAAAACATAGCAAAGTACATGATAAGGGTGATCTTTTGCACCTTACGAAGCAATAAACCAGTGCTTTTACAAGCAGCAATAACGAAATTCCACCCAATGTATTCCCCACCAAAATTTGAAATGCTAACAAGAACAACATCATTTGCCTCGTTATCCCAAGAAAATTTCCTTAGGACAAACTTTCAATAGTGGTGGAATTCGAAGTCTTTACTGCAAAATATACCTTCCTTCCACATGCGTGATAAACAACAATAATACGAGTAATAAAAGAGAAGTAGAGGTACACTAATTACTTTTAGTGTGACCAGAGATGTATATATTGTTTGACCTACAATACATACACCCTTCATACTACTACTTATACTAACATAAGTAGAGCTCGATTATTTTATCTCACAACGACACACAATTGACACTAATAGACAAGAGGTTAGTGTCGGAAGAGTTGAATTGTTCTCTCAATCTTTATTTATTAATAAAAATAAACTTTAAGGGGTTGTTTGAGCTTTTAATTTGCATGGATGAGTAGGCTATAATAGCCCACTCGCTGTTTGAGGCGTTAATTATGAAAATGAGAACAGTGATATAACTCCTCGGTTTTTGCTCCACGCGTACGACATAGATCATAGAAGTGAACACACATAGCAAAGTACATGATTAGGTTGTCATTTGTACATCTTCAACTATAGAGCTTTCTTATCTAATGGATTCACATCTTCAACTA

mRNA sequence

TTTCAATATAACGTGCCGAAAAACAGCCAGGAAAAAATAAACATAAAATCCTGATTTGAAGTTTGAACAGGCAGACATAAATCTGAAGAATTCGCCTCCATCTCTCTTCTCCAATTCGTTTCCGCCTCCCAGATCTCCCTCTCACAAATGACGACATCACGGCGTCTTGCGGATCGGAAGGTGGAGCGGTTCGAGAAGAACATTTTGAAGAGAGGGGCCGTGCCCGAGACTGCCACGAAGAAGGGAAAGGACTACCCGGTTGGCCCTCTTCTTCTTGGATTCTTCGTTTTTGTCGTCATTGGATCATCTCTGTTTCAGATAATCAGGACGGCTACAGGTGGAGGAATGGCTTGAGCCATCTTCAGTTCTGAGGGGTAGCAGAGGCAGGACATGAGGTTAAAACTTCTTGTGCTATTTGTTATTCCTCTCTGTGTCTGTGTCTGTGTCTGTGCTACCCTGTAGGAGGAGAAGCTTGGTAGTGTAGAGAAAGTAAAGACCATTTATGGTCGTCCTCTGAAGTACTTATTAAAAAAGTAATTTAAATAACAGTGTGCACATCTACAAGTGCTATGCTATCCTATATCTAATTATTCATTGTTCTCATGATCTCTTTAACTCCTAACGTGCACTTTAAAACTTTTTAAATGTGAGTTTGGAATAACTTTTTTTTATAAAACGGTTGTAAGTGTAAGTATCCTTTTTTATAAGCACTTATAGCTTAAAAACACTTTTTACCTTTCTCATTCCGAACCCAACCCAAGAATCTCATAAGAAAATTATCCCACATTAGCATGCATTTGTAGAGCTTTCAATTATGAACCAATGGAAAAAACAATTCTCCTCGCATGTCATGCCCACTCCACTGTTTTATACGCATTTGTCCGAATGGTTTGCTTAATATGATCTTGGAAAAGAGATTAAATAAAGTTCGAAATTGTAAAACCTTACTTGAATAAGATCGGTTCTATAGGTTGTACGACTCTGCCCTTGAGTTCTAATAAAGTTCAAAACTGTGGTATGAAGCATTTTCTACTGTTTGTTTGCACAAATTTCAAGTTACATCAGTTGCTAGGCATAAAAATAAAGAGGTTCAGCGTTTCTTTATATCATTTGGAAAGATTATTCTGTTTATTTAACTTCAACACACAATTGTTATACTTGTATTTAGGATCAATATAGGAGGAGGAAGGGTATGTGCTCCATCTTCTTGTTTTTCTTTTTCGAGTTTGAGTGGGGAAACGGATCAGAGGTGCTTTATATACTGAGCTGTTGCTCGAATTGGATAAATAGAAGAAATAATCTTATTAGTATTCTTCTTAGGCTTTATAATCATTACATTAAAGCTTTAAATACAATACCTATCACAACATAATCCCTCCAAACATATATTTGGTTCAGAATTCATGCTTATTTAGCAAAGAATCAAACATAAGTTAGATCATTAAGATCCCACTTATCGTAGCTTTTTGAATCTGTAAAGTTGGTGGAGAATAGGTAGAGTTCTCCATGAACAGCTTCTTTGCATTCTCTATTGGTTTAGAAGAGGAACAAATTCTTGGTCAGTACAAACTGTGTGCTTTTTGTAGCTTTAGAGTCCATCCACTGCTTTCTTAGATTAGAGGGGCCTTCATTTGTTTTCTATTAAAAGAAAGAAGAGAAAAATAACGATCTTTAGGTCCCAACATGGATCCTTTGGCTTATTTGTTATGCGTCTAGTCTTTGAAGTTTTGGTCACAAACTATTTTGTTAGTTGAAGTTTTACAAGGGTTTAACCATTCATCTATTTGAGCTTGTGGCTGAGATAATTCGTTCTTTTTCAAGCAAGAGATTTCATGCAGGACCAATTGAAAGTCCTCCCTTTTGATTGCTCAAAATCCACCATTTATAGTCATAGAATGAATGGAACTACAAATTTTGAACTTAGTATATTGATTCATTAAAATCCTAAACTTGTTTGTTAGTTAAAATGGGGTTGAGGGCAGAAAACATAGCAAAGTACATGATAAGGGTGATCTTTTGCACCTTACGAAGCAATAAACCAGTGCTTTTACAAGCAGCAATAACGAAATTCCACCCAATGTATTCCCCACCAAAATTTGAAATGCTAACAAGAACAACATCATTTGCCTCGTTATCCCAAGAAAATTTCCTTAGGACAAACTTTCAATAGTGGTGGAATTCGAAGTCTTTACTGCAAAATATACCTTCCTTCCACATGCGTGATAAACAACAATAATACGAGTAATAAAAGAGAAGTAGAGGTACACTAATTACTTTTAGTGTGACCAGAGATGTATATATTGTTTGACCTACAATACATACACCCTTCATACTACTACTTATACTAACATAAGTAGAGCTCGATTATTTTATCTCACAACGACACACAATTGACACTAATAGACAAGAGGTTAGTGTCGGAAGAGTTGAATTGTTCTCTCAATCTTTATTTATTAATAAAAATAAACTTTAAGGGGTTGTTTGAGCTTTTAATTTGCATGGATGAGTAGGCTATAATAGCCCACTCGCTGTTTGAGGCGTTAATTATGAAAATGAGAACAGTGATATAACTCCTCGGTTTTTGCTCCACGCGTACGACATAGATCATAGAAGTGAACACACATAGCAAAGTACATGATTAGGTTGTCATTTGTACATCTTCAACTATAGAGCTTTCTTATCTAATGGATTCACATCTTCAACTA

Coding sequence (CDS)

ATGACGACATCACGGCGTCTTGCGGATCGGAAGGTGGAGCGGTTCGAGAAGAACATTTTGAAGAGAGGGGCCGTGCCCGAGACTGCCACGAAGAAGGGAAAGGACTACCCGGTTGGCCCTCTTCTTCTTGGATTCTTCGTTTTTGTCGTCATTGGATCATCTCTGTTTCAGATAATCAGGACGGCTACAGGTGGAGGAATGGCTTGA

Protein sequence

MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIRTATGGGMA
Homology
[Close]
BLAST of Tan0001930 vs. ExPASy Swiss-Prot
Match: Q3T073 (Stress-associated endoplasmic reticulum protein 2 OS=Bos taurus OX=9913 GN=SERP2 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 4.8e-07
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0 

Query: 13 ERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIRTATGG 66
          E+  KNI +RG V +T   + + YPVGP LL  FVFVV GS++FQII++   G
Sbjct: 12 EKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 64

[Close]
BLAST of Tan0001930 vs. ExPASy Swiss-Prot
Match: Q8N6R1 (Stress-associated endoplasmic reticulum protein 2 OS=Homo sapiens OX=9606 GN=SERP2 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 4.8e-07
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0 

Query: 13 ERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIRTATGG 66
          E+  KNI +RG V +T   + + YPVGP LL  FVFVV GS++FQII++   G
Sbjct: 12 EKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 64

[Close]
BLAST of Tan0001930 vs. ExPASy Swiss-Prot
Match: Q6TAW2 (Stress-associated endoplasmic reticulum protein 2 OS=Mus musculus OX=10090 GN=Serp2 PE=3 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 4.8e-07
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0 

Query: 13 ERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIRTATGG 66
          E+  KNI +RG V +T   + + YPVGP LL  FVFVV GS++FQII++   G
Sbjct: 12 EKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 64

[Close]
BLAST of Tan0001930 vs. ExPASy Swiss-Prot
Match: Q5REZ1 (Stress-associated endoplasmic reticulum protein 1 OS=Pongo abelii OX=9601 GN=SERP1 PE=3 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 1.3e-04
Identity = 25/54 (46.30%), Postives = 35/54 (64.81%), Query Frame = 0 

Query: 13 ERFEKNILKRGAVPETA-TKKGKDYPVGPLLLGFFVFVVIGSSLFQIIRTATGG 66
          E+  KNI +RG V +T+    G+   VGP LL  F+FVV GS++FQII++   G
Sbjct: 12 EKHSKNITQRGNVAKTSRNAPGEKASVGPWLLALFIFVVCGSAIFQIIQSIRMG 65

[Close]
BLAST of Tan0001930 vs. ExPASy Swiss-Prot
Match: Q3ZBR1 (Stress-associated endoplasmic reticulum protein 1 OS=Bos taurus OX=9913 GN=SERP1 PE=3 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 5.0e-04
Identity = 24/54 (44.44%), Postives = 35/54 (64.81%), Query Frame = 0 

Query: 13 ERFEKNILKRGAVPETATKKGKD-YPVGPLLLGFFVFVVIGSSLFQIIRTATGG 66
          E+  KNI +RG V +T+    ++   VGP LL  F+FVV GS++FQII++   G
Sbjct: 12 EKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIRMG 65

[Close]
BLAST of Tan0001930 vs. NCBI nr
Match: XP_038900855.1 (stress-associated endoplasmic reticulum protein 2-like [Benincasa hispida])

HSP 1 Score: 133.7 bits (335), Expect = 6.2e-28
Identity = 67/68 (98.53%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGP+LLGFFVFVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPILLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TATGGGMA
Sbjct: 61 TATGGGMA 68

[Close]
BLAST of Tan0001930 vs. NCBI nr
Match: XP_022956326.1 (stress-associated endoplasmic reticulum protein 2-like [Cucurbita moschata] >XP_022979456.1 stress-associated endoplasmic reticulum protein 2-like [Cucurbita maxima] >XP_023526291.1 stress-associated endoplasmic reticulum protein 2-like [Cucurbita pepo subsp. pepo] >KAG6582010.1 Stress-associated endoplasmic reticulum protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018433.1 Stress-associated endoplasmic reticulum protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 132.9 bits (333), Expect = 1.1e-27
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0 

Query: 1  MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRRLADRKVERFEKNILKRGAVPET TKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TATGGGMA
Sbjct: 61 TATGGGMA 68

[Close]
BLAST of Tan0001930 vs. NCBI nr
Match: XP_022932563.1 (stress-associated endoplasmic reticulum protein 2-like isoform X2 [Cucurbita moschata] >XP_022972333.1 stress-associated endoplasmic reticulum protein 2-like [Cucurbita maxima] >XP_023538872.1 stress-associated endoplasmic reticulum protein 2-like [Cucurbita pepo subsp. pepo] >KAG6597676.1 Stress-associated endoplasmic reticulum protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 132.9 bits (333), Expect = 1.1e-27
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0 

Query: 1  MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRR ADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR
Sbjct: 1  MTTSRRFADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TATGGGMA
Sbjct: 61 TATGGGMA 68

[Close]
BLAST of Tan0001930 vs. NCBI nr
Match: XP_004152134.1 (stress-associated endoplasmic reticulum protein 2 [Cucumis sativus] >KGN53016.1 hypothetical protein Csa_015278 [Cucumis sativus])

HSP 1 Score: 132.1 bits (331), Expect = 1.8e-27
Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGP+LLGFFVFVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPILLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGM 68
          TATGGGM
Sbjct: 61 TATGGGM 67

[Close]
BLAST of Tan0001930 vs. NCBI nr
Match: XP_022932562.1 (stress-associated endoplasmic reticulum protein 2-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 131.0 bits (328), Expect = 4.0e-27
Identity = 66/67 (98.51%), Postives = 66/67 (98.51%), Query Frame = 0 

Query: 2  TTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIRT 61
          TTSRR ADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIRT
Sbjct: 10 TTSRRFADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIRT 69

Query: 62 ATGGGMA 69
          ATGGGMA
Sbjct: 70 ATGGGMA 76

[Close]
BLAST of Tan0001930 vs. ExPASy TrEMBL
Match: A0A6J1I9M5 (stress-associated endoplasmic reticulum protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111470902 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.1e-28
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0 

Query: 1  MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRR ADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR
Sbjct: 1  MTTSRRFADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TATGGGMA
Sbjct: 61 TATGGGMA 68

[Close]
BLAST of Tan0001930 vs. ExPASy TrEMBL
Match: A0A6J1IQU2 (stress-associated endoplasmic reticulum protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111479167 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.1e-28
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0 

Query: 1  MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRRLADRKVERFEKNILKRGAVPET TKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TATGGGMA
Sbjct: 61 TATGGGMA 68

[Close]
BLAST of Tan0001930 vs. ExPASy TrEMBL
Match: A0A6J1F232 (stress-associated endoplasmic reticulum protein 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439082 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.1e-28
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0 

Query: 1  MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRR ADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR
Sbjct: 1  MTTSRRFADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TATGGGMA
Sbjct: 61 TATGGGMA 68

[Close]
BLAST of Tan0001930 vs. ExPASy TrEMBL
Match: A0A6J1GW87 (stress-associated endoplasmic reticulum protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111458060 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.1e-28
Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 0 

Query: 1  MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRRLADRKVERFEKNILKRGAVPET TKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVERFEKNILKRGAVPETTTKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TATGGGMA
Sbjct: 61 TATGGGMA 68

[Close]
BLAST of Tan0001930 vs. ExPASy TrEMBL
Match: A0A0A0KYW0 (Stress associated endoplasmic reticulum protein OS=Cucumis sativus OX=3659 GN=Csa_4G011630 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 8.7e-28
Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0 

Query: 1  MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGP+LLGFFVFVVIGSSLFQIIR
Sbjct: 1  MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPILLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGM 68
          TATGGGM
Sbjct: 61 TATGGGM 67

[Close]
BLAST of Tan0001930 vs. TAIR 10
Match: AT1G27350.1 (Ribosome associated membrane protein RAMP4 )

HSP 1 Score: 123.6 bits (309), Expect = 6.0e-29
Identity = 60/68 (88.24%), Postives = 65/68 (95.59%), Query Frame = 0 

Query: 1  MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTS+RLADRK+E+F+KNILKRG VPET TKKGKDYPVGP+LLGFFVFVVIGSSLFQIIR
Sbjct: 1  MTTSKRLADRKIEKFDKNILKRGFVPETTTKKGKDYPVGPILLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TAT GGMA
Sbjct: 61 TATSGGMA 68

[Close]
BLAST of Tan0001930 vs. TAIR 10
Match: AT1G27330.1 (Ribosome associated membrane protein RAMP4 )

HSP 1 Score: 123.6 bits (309), Expect = 6.0e-29
Identity = 60/68 (88.24%), Postives = 65/68 (95.59%), Query Frame = 0 

Query: 1  MTTSRRLADRKVERFEKNILKRGAVPETATKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR 60
          MTTS+RLADRK+E+F+KNILKRG VPET TKKGKDYPVGP+LLGFFVFVVIGSSLFQIIR
Sbjct: 1  MTTSKRLADRKIEKFDKNILKRGFVPETTTKKGKDYPVGPILLGFFVFVVIGSSLFQIIR 60

Query: 61 TATGGGMA 69
          TAT GGMA
Sbjct: 61 TATSGGMA 68

The following BLAST results are available for this feature:
BLAST of Tan0001930 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q3T0734.8e-0750.94Stress-associated endoplasmic reticulum protein 2 OS=Bos taurus OX=9913 GN=SERP2... [more]
Q8N6R14.8e-0750.94Stress-associated endoplasmic reticulum protein 2 OS=Homo sapiens OX=9606 GN=SER... [more]
Q6TAW24.8e-0750.94Stress-associated endoplasmic reticulum protein 2 OS=Mus musculus OX=10090 GN=Se... [more]
Q5REZ11.3e-0446.30Stress-associated endoplasmic reticulum protein 1 OS=Pongo abelii OX=9601 GN=SER... [more]
Q3ZBR15.0e-0444.44Stress-associated endoplasmic reticulum protein 1 OS=Bos taurus OX=9913 GN=SERP1... [more]
BLAST of Tan0001930 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038900855.16.2e-2898.53stress-associated endoplasmic reticulum protein 2-like [Benincasa hispida][more]
XP_022956326.11.1e-2798.53stress-associated endoplasmic reticulum protein 2-like [Cucurbita moschata] >XP_... [more]
XP_022932563.11.1e-2798.53stress-associated endoplasmic reticulum protein 2-like isoform X2 [Cucurbita mos... [more]
XP_004152134.11.8e-2798.51stress-associated endoplasmic reticulum protein 2 [Cucumis sativus] >KGN53016.1 ... [more]
XP_022932562.14.0e-2798.51stress-associated endoplasmic reticulum protein 2-like isoform X1 [Cucurbita mos... [more]
BLAST of Tan0001930 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I9M55.1e-2898.53stress-associated endoplasmic reticulum protein 2-like OS=Cucurbita maxima OX=36... [more]
A0A6J1IQU25.1e-2898.53stress-associated endoplasmic reticulum protein 2-like OS=Cucurbita maxima OX=36... [more]
A0A6J1F2325.1e-2898.53stress-associated endoplasmic reticulum protein 2-like isoform X2 OS=Cucurbita m... [more]
A0A6J1GW875.1e-2898.53stress-associated endoplasmic reticulum protein 2-like OS=Cucurbita moschata OX=... [more]
A0A0A0KYW08.7e-2898.51Stress associated endoplasmic reticulum protein OS=Cucumis sativus OX=3659 GN=Cs... [more]
BLAST of Tan0001930 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G27350.16.0e-2988.24Ribosome associated membrane protein RAMP4 [more]
AT1G27330.16.0e-2988.24Ribosome associated membrane protein RAMP4 [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010580Stress-associated endoplasmic reticulum proteinPFAMPF06624RAMP4coord: 5..61
e-value: 6.3E-25
score: 86.9
IPR010580Stress-associated endoplasmic reticulum proteinPANTHERPTHR15601STRESS ASSOCIATED ENDOPLASMIC RETICULUM PROTEIN SERP1/RAMP4coord: 1..68
NoneNo IPR availablePANTHERPTHR15601:SF26STRESS ASSOCIATED ENDOPLASMIC RETICULUM PROTEINcoord: 1..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0001930.1Tan0001930.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030968 endoplasmic reticulum unfolded protein response
biological_process GO:0006486 protein glycosylation
biological_process GO:0015031 protein transport
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0016021 integral component of membrane