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Tan0001891 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACTCCTTTACAACATAACTCAAAAAAAGAAAAAAAAAATGAAAAAGGGTTCCCTTTCCCTTTCACCATCTTCACTCCAAGTAATTTTTGGCTCAAATTCATCATCTTCAACCTTAACCCAGCTGGTGAAATTCAAAACCCTATTGCAGAGTCTCATTCTATCTCTGGCTAAAGCCATTTCCAGAGCCAAAACGACGGCGCTTCACATCTTCAAACAGGCCAATTACCAATCCACCGCCATGGCTAATTGGAAGAAGAAAAAGAATAAGCTTCTCTTCGGATCCTTCAGACTTCATTACAACTGGTGCTCTTCGTCGTCATCGCACGTGACTCCGGCGCCGGTCACGTGGGAGGGGGACTCCGGCGACGAGCTTTCTGGGTATTTGCAGTGGCTGGAGGAGAGAGATGAAAAAAAAGAAGTGAATGAGATTGATAAATTGGCAGAGATTTTTATTGCCAGGTGTCATGAGAAATTCAGGCTGGAAAAACAGGAGTCTTATAGGAGGTTTCAACAATTGATGGCTACAAGCTTGTGAGGATCTTTTTTTTAAAAAAAAATTAATTGTGGGGTTTTGTTTTGGTGGGAGGAAAAAAATAAATTTGAATTTCTTGAGGATGGGGATGGTGGTGATATTAATCTGTAAGATTTTTTTTCTTTTTTTTTTTTTACCAGTAATTGAAATTAATAAGGG AACTCCTTTACAACATAACTCAAAAAAAGAAAAAAAAAATGAAAAAGGGTTCCCTTTCCCTTTCACCATCTTCACTCCAAGTAATTTTTGGCTCAAATTCATCATCTTCAACCTTAACCCAGCTGGTGAAATTCAAAACCCTATTGCAGAGTCTCATTCTATCTCTGGCTAAAGCCATTTCCAGAGCCAAAACGACGGCGCTTCACATCTTCAAACAGGCCAATTACCAATCCACCGCCATGGCTAATTGGAAGAAGAAAAAGAATAAGCTTCTCTTCGGATCCTTCAGACTTCATTACAACTGGTGCTCTTCGTCGTCATCGCACGTGACTCCGGCGCCGGTCACGTGGGAGGGGGACTCCGGCGACGAGCTTTCTGGGTATTTGCAGTGGCTGGAGGAGAGAGATGAAAAAAAAGAAGTGAATGAGATTGATAAATTGGCAGAGATTTTTATTGCCAGGTGTCATGAGAAATTCAGGCTGGAAAAACAGGAGTCTTATAGGAGGTTTCAACAATTGATGGCTACAAGCTTGTGAGGATCTTTTTTTTAAAAAAAAATTAATTGTGGGGTTTTGTTTTGGTGGGAGGAAAAAAATAAATTTGAATTTCTTGAGGATGGGGATGGTGGTGATATTAATCTGTAAGATTTTTTTTCTTTTTTTTTTTTTACCAGTAATTGAAATTAATAAGGG ATGAAAAAGGGTTCCCTTTCCCTTTCACCATCTTCACTCCAAGTAATTTTTGGCTCAAATTCATCATCTTCAACCTTAACCCAGCTGGTGAAATTCAAAACCCTATTGCAGAGTCTCATTCTATCTCTGGCTAAAGCCATTTCCAGAGCCAAAACGACGGCGCTTCACATCTTCAAACAGGCCAATTACCAATCCACCGCCATGGCTAATTGGAAGAAGAAAAAGAATAAGCTTCTCTTCGGATCCTTCAGACTTCATTACAACTGGTGCTCTTCGTCGTCATCGCACGTGACTCCGGCGCCGGTCACGTGGGAGGGGGACTCCGGCGACGAGCTTTCTGGGTATTTGCAGTGGCTGGAGGAGAGAGATGAAAAAAAAGAAGTGAATGAGATTGATAAATTGGCAGAGATTTTTATTGCCAGGTGTCATGAGAAATTCAGGCTGGAAAAACAGGAGTCTTATAGGAGGTTTCAACAATTGATGGCTACAAGCTTGTGA MKKGSLSLSPSSLQVIFGSNSSSSTLTQLVKFKTLLQSLILSLAKAISRAKTTALHIFKQANYQSTAMANWKKKKNKLLFGSFRLHYNWCSSSSSHVTPAPVTWEGDSGDELSGYLQWLEERDEKKEVNEIDKLAEIFIARCHEKFRLEKQESYRRFQQLMATSL Homology
BLAST of Tan0001891 vs. NCBI nr
Match: XP_022935250.1 (uncharacterized protein LOC111442186 [Cucurbita moschata]) HSP 1 Score: 193.0 bits (489), Expect = 2.1e-45 Identity = 115/170 (67.65%), Postives = 135/170 (79.41%), Query Frame = 0
BLAST of Tan0001891 vs. NCBI nr
Match: XP_022983138.1 (uncharacterized protein LOC111481779 [Cucurbita maxima]) HSP 1 Score: 192.6 bits (488), Expect = 2.7e-45 Identity = 111/167 (66.47%), Postives = 133/167 (79.64%), Query Frame = 0
BLAST of Tan0001891 vs. NCBI nr
Match: XP_023526429.1 (uncharacterized protein LOC111789933 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 191.0 bits (484), Expect = 7.9e-45 Identity = 115/173 (66.47%), Postives = 135/173 (78.03%), Query Frame = 0
BLAST of Tan0001891 vs. NCBI nr
Match: KAG6580813.1 (hypothetical protein SDJN03_20815, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017563.1 hypothetical protein SDJN02_19429, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 189.9 bits (481), Expect = 1.8e-44 Identity = 115/173 (66.47%), Postives = 134/173 (77.46%), Query Frame = 0
BLAST of Tan0001891 vs. NCBI nr
Match: XP_038906153.1 (uncharacterized protein LOC120092033 [Benincasa hispida]) HSP 1 Score: 174.9 bits (442), Expect = 5.9e-40 Identity = 107/177 (60.45%), Postives = 124/177 (70.06%), Query Frame = 0
BLAST of Tan0001891 vs. ExPASy TrEMBL
Match: A0A6J1FA41 (uncharacterized protein LOC111442186 OS=Cucurbita moschata OX=3662 GN=LOC111442186 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 1.0e-45 Identity = 115/170 (67.65%), Postives = 135/170 (79.41%), Query Frame = 0
BLAST of Tan0001891 vs. ExPASy TrEMBL
Match: A0A6J1J6X1 (uncharacterized protein LOC111481779 OS=Cucurbita maxima OX=3661 GN=LOC111481779 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 1.3e-45 Identity = 111/167 (66.47%), Postives = 133/167 (79.64%), Query Frame = 0
BLAST of Tan0001891 vs. ExPASy TrEMBL
Match: A0A0A0LBV5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G809400 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 1.2e-38 Identity = 111/182 (60.99%), Postives = 126/182 (69.23%), Query Frame = 0
BLAST of Tan0001891 vs. ExPASy TrEMBL
Match: A0A5A7TJT8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00520 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 5.9e-38 Identity = 109/184 (59.24%), Postives = 125/184 (67.93%), Query Frame = 0
BLAST of Tan0001891 vs. ExPASy TrEMBL
Match: A0A1S3B8H1 (uncharacterized protein LOC103487158 OS=Cucumis melo OX=3656 GN=LOC103487158 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 5.9e-38 Identity = 109/184 (59.24%), Postives = 125/184 (67.93%), Query Frame = 0
BLAST of Tan0001891 vs. TAIR 10
Match: AT3G57950.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42180.1); Has 81 Blast hits to 81 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 104.8 bits (260), Expect = 7.0e-23 Identity = 70/176 (39.77%), Postives = 102/176 (57.95%), Query Frame = 0
BLAST of Tan0001891 vs. TAIR 10
Match: AT5G06790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible, petal differentiation and expansion stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 92.4 bits (228), Expect = 3.6e-19 Identity = 81/203 (39.90%), Postives = 110/203 (54.19%), Query Frame = 0
BLAST of Tan0001891 vs. TAIR 10
Match: AT2G42180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57950.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 73.2 bits (178), Expect = 2.2e-13 Identity = 63/173 (36.42%), Postives = 86/173 (49.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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