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Tan0001882 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAACCTCATCTTCTTCGTCAAAATTTTGCTATCCTCTTCGTTTCTCTGTAATGCTAATGGCTACCAATCTCTCCTTTTCTCCTCAATCCCTAATTCCACTTCAGAAGCCATCTCTCTTACCACGCGTTCAACTCGGTCACTTTATTCAGCTCAACTCAGTGAGTCGGATTTCGAGTGCTCGCCTTCATTCCGGCTCTCAATCGGGGGTTTTGGTGCGAGCTGCTTTGGATAGCGATTACTCGTCGAAGAGGAGTAGTAGCAATGAGCAGAGGGAGACGATTATGTTGCCTGGTTGTGATTATAACCATTGGCTTATTGTCATGGAGTTCCCTAAAGATCCTGCTCCGACGAGGGAACAGATGATTGATACCTACCTCAACACTCTTGCTACTGTATTGGGAAGGTTCTCTTTCTTTCTCTCTCTCTCTCTTTATGCATATGTTCGTTTTCATTTCAAATGTTTGTGTGAGAATTGCATTTGTGTAAAGGGTTAAAAAATCTCTGCTCGGACATGAATCGGTTTTGGAGGCTGAAAATCTAACTCTTATGTTTTTGTGTTTCTCGCGGCTGAAAAGGAAATTATAGAAATGTATCAGGTTTTGGAAACGGAAATGTTATGTCGATCTAGCGTCTTTTTTTTTTTTTTTTAGCCAGAAACGAAATTTTTCAAAGAGACTATTGGAACTCCAAAATGTGTAAAAACAAAAACAGAACTAAAGAAAAAGAAATGACAAACCATTCTATAGGGAAAATAAAGGTAAGCCAAATTAGAACAAATACCCTGGAAAAAAAAACAGCAAAAGATTTAGGAAGAGAGCATTAAAAAGAAGTCTTTAAACATGCTGAATCGATACGATATGAAAGCTGTCTTGAGCTGTGGTAAATTAATATGCAACAGTGGGAGTTTGAATTTGGTGAGTTTTGGAATTTCATTTTTGAAGTTAAATGTTTAGACACCTACGAGACACTTTTGAAATTCATAGACCTATTAGGGGCAATCAAAAGTTCAAGGACCTGCACTTTTTGAAGTTGAGGAACCTATTAGACGCCTCTTAAATTTCAGGACTAAACATATAATTTAACCTTTATTACATCAGATTGTGGTTAATCTGAAAAACTTGAGAACTGAACCTTCTGGGGTTTTGATGAATAGTTGGTCAAGGTTATTTTCACCTCTCATGTGTGGATTTTCTTGGAAACAGCATGGAAGAAGCTAAGAAAAACATGTATGCTTTCAGCACCACCACCTATACTGGATTCCAATGCACAGTGTCCGAAGAAACATCGGAGAAATTTAAGGGTAAGTGTTAGTTTATGAACTTTTCTTGGAAGCCCTGTCCTGGCAGCTATGCTGAGAGATCCACCTGAACCTTTTCATTGCAGGATTACCCGGAGTTCTTTGGGTGTTGCCAGATTCTTATATAGATGTCAAGAACAAAGATTATGGAGGTTGGGTTTATATCCTCTCTTTATCTTTTTACCCCCTGTTTCTTGAAGATGGTATTGTCAGTTTGCAAACATAACAGTAGGATTAGGAGCTTCTTTTCAGTAGTTTTATCTAGATTATCATAGATTCTTGTTGTTAACTTTTAGGTGACAAGTATATAAACGGGGAGATAATTCCATCCAAGTATCCTGTTTATGAACCAAAGAAACGAAGAGAAACAAAATACGAAAGTAGGAGATATGAAAGGAAAAGAGATGGCCCTCCTCCTGAACAACGAAGGCCGAGACCACAAGCGACCAGAACGGAATCAAATTCAGGATAAGGTAGTGCAGTGATTTTCCTTCTATTATTTACAGTGCTTGCATGGGAAAATAGAATGTTTTTATTCATTTCCTTTGCAATCCATTAGTGTATGACTTAAGATTGTGCTTTGAACTGAACTAGTAAGAAAGATAGATGCAGAATGAAGAGGTACTCCAGGGAATTTCATACTGTTCTTGGAATTTTGTACATGCTGTGCTGTAGTTCATCCTGAAAAAGGAATCTTGTACTGTGATGTGACCTTCTAGTTCAGAGTTTCATTGGAGAATATATGGTTGAGAACAGTTCTTTTCATTACAGAGGAAATTTAGAGTACTTTTGGTTGATT GAAAAACCTCATCTTCTTCGTCAAAATTTTGCTATCCTCTTCGTTTCTCTGTAATGCTAATGGCTACCAATCTCTCCTTTTCTCCTCAATCCCTAATTCCACTTCAGAAGCCATCTCTCTTACCACGCGTTCAACTCGGTCACTTTATTCAGCTCAACTCAGTGAGTCGGATTTCGAGTGCTCGCCTTCATTCCGGCTCTCAATCGGGGGTTTTGGTGCGAGCTGCTTTGGATAGCGATTACTCGTCGAAGAGGAGTAGTAGCAATGAGCAGAGGGAGACGATTATGTTGCCTGGTTGTGATTATAACCATTGGCTTATTGTCATGGAGTTCCCTAAAGATCCTGCTCCGACGAGGGAACAGATGATTGATACCTACCTCAACACTCTTGCTACTGTATTGGGAAGCATGGAAGAAGCTAAGAAAAACATGTATGCTTTCAGCACCACCACCTATACTGGATTCCAATGCACAGTGTCCGAAGAAACATCGGAGAAATTTAAGGGATTACCCGGAGTTCTTTGGGTGTTGCCAGATTCTTATATAGATGTCAAGAACAAAGATTATGGAGGTGACAAGTATATAAACGGGGAGATAATTCCATCCAAGTATCCTGTTTATGAACCAAAGAAACGAAGAGAAACAAAATACGAAAGTAGGAGATATGAAAGGAAAAGAGATGGCCCTCCTCCTGAACAACGAAGGCCGAGACCACAAGCGACCAGAACGGAATCAAATTCAGGATAAGGTAGTGCAGTGATTTTCCTTCTATTATTTACAGTGCTTGCATGGGAAAATAGAATGTTTTTATTCATTTCCTTTGCAATCCATTAGTGTATGACTTAAGATTGTGCTTTGAACTGAACTAGTAAGAAAGATAGATGCAGAATGAAGAGGTACTCCAGGGAATTTCATACTGTTCTTGGAATTTTGTACATGCTGTGCTGTAGTTCATCCTGAAAAAGGAATCTTGTACTGTGATGTGACCTTCTAGTTCAGAGTTTCATTGGAGAATATATGGTTGAGAACAGTTCTTTTCATTACAGAGGAAATTTAGAGTACTTTTGGTTGATT ATGCTAATGGCTACCAATCTCTCCTTTTCTCCTCAATCCCTAATTCCACTTCAGAAGCCATCTCTCTTACCACGCGTTCAACTCGGTCACTTTATTCAGCTCAACTCAGTGAGTCGGATTTCGAGTGCTCGCCTTCATTCCGGCTCTCAATCGGGGGTTTTGGTGCGAGCTGCTTTGGATAGCGATTACTCGTCGAAGAGGAGTAGTAGCAATGAGCAGAGGGAGACGATTATGTTGCCTGGTTGTGATTATAACCATTGGCTTATTGTCATGGAGTTCCCTAAAGATCCTGCTCCGACGAGGGAACAGATGATTGATACCTACCTCAACACTCTTGCTACTGTATTGGGAAGCATGGAAGAAGCTAAGAAAAACATGTATGCTTTCAGCACCACCACCTATACTGGATTCCAATGCACAGTGTCCGAAGAAACATCGGAGAAATTTAAGGGATTACCCGGAGTTCTTTGGGTGTTGCCAGATTCTTATATAGATGTCAAGAACAAAGATTATGGAGGTGACAAGTATATAAACGGGGAGATAATTCCATCCAAGTATCCTGTTTATGAACCAAAGAAACGAAGAGAAACAAAATACGAAAGTAGGAGATATGAAAGGAAAAGAGATGGCCCTCCTCCTGAACAACGAAGGCCGAGACCACAAGCGACCAGAACGGAATCAAATTCAGGATAA MLMATNLSFSPQSLIPLQKPSLLPRVQLGHFIQLNSVSRISSARLHSGSQSGVLVRAALDSDYSSKRSSSNEQRETIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVSEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYINGEIIPSKYPVYEPKKRRETKYESRRYERKRDGPPPEQRRPRPQATRTESNSG Homology
BLAST of Tan0001882 vs. ExPASy Swiss-Prot
Match: Q9LPZ1 (Multiple organellar RNA editing factor 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MORF9 PE=1 SV=1) HSP 1 Score: 309.7 bits (792), Expect = 2.8e-83 Identity = 161/232 (69.40%), Postives = 183/232 (78.88%), Query Frame = 0
BLAST of Tan0001882 vs. ExPASy Swiss-Prot
Match: Q38732 (DAG protein, chloroplastic OS=Antirrhinum majus OX=4151 GN=DAG PE=2 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 5.8e-81 Identity = 160/233 (68.67%), Postives = 187/233 (80.26%), Query Frame = 0
BLAST of Tan0001882 vs. ExPASy Swiss-Prot
Match: Q84JZ6 (Multiple organellar RNA editing factor 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF3 PE=1 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 6.5e-40 Identity = 85/151 (56.29%), Postives = 108/151 (71.52%), Query Frame = 0
BLAST of Tan0001882 vs. ExPASy Swiss-Prot
Match: O22793 (Multiple organellar RNA editing factor 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MORF2 PE=1 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 7.0e-34 Identity = 93/215 (43.26%), Postives = 123/215 (57.21%), Query Frame = 0
BLAST of Tan0001882 vs. ExPASy Swiss-Prot
Match: O49429 (Multiple organellar RNA editing factor 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF1 PE=1 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 2.2e-32 Identity = 81/195 (41.54%), Postives = 112/195 (57.44%), Query Frame = 0
BLAST of Tan0001882 vs. NCBI nr
Match: XP_038900065.1 (multiple organellar RNA editing factor 9, chloroplastic [Benincasa hispida]) HSP 1 Score: 446.4 bits (1147), Expect = 1.5e-121 Identity = 226/230 (98.26%), Postives = 229/230 (99.57%), Query Frame = 0
BLAST of Tan0001882 vs. NCBI nr
Match: XP_004151975.1 (multiple organellar RNA editing factor 9, chloroplastic [Cucumis sativus] >XP_008454611.1 PREDICTED: multiple organellar RNA editing factor 9, chloroplastic [Cucumis melo] >KAA0063450.1 DAG protein [Cucumis melo var. makuwa] >KAE8650675.1 hypothetical protein Csa_010519 [Cucumis sativus]) HSP 1 Score: 442.2 bits (1136), Expect = 2.8e-120 Identity = 222/230 (96.52%), Postives = 226/230 (98.26%), Query Frame = 0
BLAST of Tan0001882 vs. NCBI nr
Match: XP_023521912.1 (multiple organellar RNA editing factor 9, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 436.4 bits (1121), Expect = 1.5e-118 Identity = 218/229 (95.20%), Postives = 225/229 (98.25%), Query Frame = 0
BLAST of Tan0001882 vs. NCBI nr
Match: XP_022939990.1 (multiple organellar RNA editing factor 9, chloroplastic-like [Cucurbita moschata] >KAG6607838.1 Multiple organellar RNA editing factor 9, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015236.1 Multiple organellar RNA editing factor 9, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 431.0 bits (1107), Expect = 6.3e-117 Identity = 215/229 (93.89%), Postives = 223/229 (97.38%), Query Frame = 0
BLAST of Tan0001882 vs. NCBI nr
Match: XP_022139753.1 (multiple organellar RNA editing factor 9, chloroplastic [Momordica charantia] >XP_022139754.1 multiple organellar RNA editing factor 9, chloroplastic [Momordica charantia]) HSP 1 Score: 429.5 bits (1103), Expect = 1.8e-116 Identity = 218/230 (94.78%), Postives = 225/230 (97.83%), Query Frame = 0
BLAST of Tan0001882 vs. ExPASy TrEMBL
Match: A0A5A7V8E4 (DAG protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold977G00330 PE=4 SV=1) HSP 1 Score: 442.2 bits (1136), Expect = 1.3e-120 Identity = 222/230 (96.52%), Postives = 226/230 (98.26%), Query Frame = 0
BLAST of Tan0001882 vs. ExPASy TrEMBL
Match: A0A1S3C092 (multiple organellar RNA editing factor 9, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103494977 PE=4 SV=1) HSP 1 Score: 442.2 bits (1136), Expect = 1.3e-120 Identity = 222/230 (96.52%), Postives = 226/230 (98.26%), Query Frame = 0
BLAST of Tan0001882 vs. ExPASy TrEMBL
Match: A0A6J1FPB2 (multiple organellar RNA editing factor 9, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111445760 PE=4 SV=1) HSP 1 Score: 431.0 bits (1107), Expect = 3.1e-117 Identity = 215/229 (93.89%), Postives = 223/229 (97.38%), Query Frame = 0
BLAST of Tan0001882 vs. ExPASy TrEMBL
Match: A0A6J1CDW8 (multiple organellar RNA editing factor 9, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111010589 PE=4 SV=1) HSP 1 Score: 429.5 bits (1103), Expect = 8.9e-117 Identity = 218/230 (94.78%), Postives = 225/230 (97.83%), Query Frame = 0
BLAST of Tan0001882 vs. ExPASy TrEMBL
Match: A0A6J1IX05 (multiple organellar RNA editing factor 9, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111480671 PE=4 SV=1) HSP 1 Score: 429.1 bits (1102), Expect = 1.2e-116 Identity = 215/229 (93.89%), Postives = 222/229 (96.94%), Query Frame = 0
BLAST of Tan0001882 vs. TAIR 10
Match: AT1G11430.1 (plastid developmental protein DAG, putative ) HSP 1 Score: 309.7 bits (792), Expect = 2.0e-84 Identity = 161/232 (69.40%), Postives = 183/232 (78.88%), Query Frame = 0
BLAST of Tan0001882 vs. TAIR 10
Match: AT3G06790.1 (plastid developmental protein DAG, putative ) HSP 1 Score: 165.6 bits (418), Expect = 4.6e-41 Identity = 85/151 (56.29%), Postives = 108/151 (71.52%), Query Frame = 0
BLAST of Tan0001882 vs. TAIR 10
Match: AT3G06790.2 (plastid developmental protein DAG, putative ) HSP 1 Score: 165.6 bits (418), Expect = 4.6e-41 Identity = 85/151 (56.29%), Postives = 108/151 (71.52%), Query Frame = 0
BLAST of Tan0001882 vs. TAIR 10
Match: AT2G33430.1 (differentiation and greening-like 1 ) HSP 1 Score: 145.6 bits (366), Expect = 5.0e-35 Identity = 93/215 (43.26%), Postives = 123/215 (57.21%), Query Frame = 0
BLAST of Tan0001882 vs. TAIR 10
Match: AT4G20020.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44780.1); Has 28928 Blast hits to 16023 proteins in 1033 species: Archae - 4; Bacteria - 4155; Metazoa - 15463; Fungi - 2938; Plants - 3091; Viruses - 205; Other Eukaryotes - 3072 (source: NCBI BLink). ) HSP 1 Score: 140.6 bits (353), Expect = 1.6e-33 Identity = 81/195 (41.54%), Postives = 112/195 (57.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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