Tan0001745 (gene) Snake gourd v1

Overview


Name	Tan0001745
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Location	LG10: 4529296 .. 4531430 (-)
RNA-Seq Expression	Tan0001745
Synteny	Tan0001745

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGAAATTTAGAAGGCGACTCATACCACACTTGAGGTACAGCGGGATGAAGGATCCGAGGCCACCGAGACGACGTGGAGGATCGCGGTACCCGGGCCAGCGGCATACGCTGCCAGCGTGGAGTGCAGAGCCTGTTGTTAAGCGTGCGTCGGGACAGGAGTTCGAGACCACGCTACTTCACTTCATAATTCTAATGGCTTGGAAGCAGGCATGGCATGGCGAATCATGGCGAGACCGGCGTTTCCATGACACGCTCGCCGGTATCATGGCTGACTGTACTTGCTCCCGCGGCGGCTCATGCAACGAGGCGAGTAGTAAGGGATACGGCAGGCTCGGCATGAGAGGAAGACGAGAAGAGAGAGAGAGTTCAATGGGTCCAAGGAGAGAGCAGTATGTGTGGAGCGCGAAGAGAATGATAGGAGTGGGCCGACCAGCGGACCGCCGAAGCCGGGGAAATACGCGGGGACGCGCCGGGGAGGAGATAGGCTTTCGAGAGCTTTCGAGAGAGAGAGAGTAGAGATGGGGAGTTTGGCTTGATGGGAAGGATATGGAAGGGGAAGAGAGGGAAAGGGAAAAGGTTATGTTAGGGAGTGCCGATCGGAGTCCGCTAGCTGCGGCTGTTCTACTGAAGGCAACACTTGACAGGGAGCGTGAGAAGATGGTTCCTCACGCCTTCCTCCTTTTTGTTTTAAAAAAATCCGCCCAATCACACGCGGTCTGCACGCCGTGAACTCCTCCAATAAATTTACTACTTGCCTGCCGTGATCCGCGACGTGATTTCTCCTCTGGAAGGCGAGATGTGTGGTTTCGCCGCACGTGAGTGACCTGGCTAGTTCCGCTGTAATCACCGTAACTTACTACACGAAAGCGTTCAACCGCTTTTCCTGCCCCGATCGCAATTCCACCGCCTAGAAACGCGCGGCAGCATCCGCATATGCGTCGCAGCATCGGCTATTATTATTACGGAACCGCGCCACGAACCGCGACCGACAGGTGAGCGAGCTTATGTCTCCACTTTGTCAACGCGCTCCGCAATCTGACCAGAACTGCAAGCCTTGTTCAGACTCTAGGCACTTACCTCTCAGTGTCGTACTCGAACAGAGATCTGAATGGCGCCTAACTCTCACGCCCCCACGTGGCAATTACTCGCACTGCAGGCCAAGCAATAATAACATCCGAGATCGAGTAGCCCATGCCCATATCATTTCAACACTGTCCACAATTCACTACACCAACCTCCTGAACTGCGTCCTTCTCTCCATAAAGCAAGAGGGCCATACCAATGATGCCTGATAACTATATGCGTTAATCCATCAAAAGCGGCGGTAGAGTCACACCGCGGACAGTCCAAGTCCAATGATGCCCGCATATCCTCAGTACTGTCGCTTTCTTTCTCGACTCCACATGTCTGCGTGAAATGTGTTCCCTGCCCTTCTCAAAACGAACTGGCTCAAAACTCGTACCTGGTAAGTCGAACGAGTTCAACATACATTTTCCGAACCGCGACTACCTCTCTTCTTCATGAACGCAACAACCAGCCAGAGTATGTAGGCTTGTAAGAAGTGATCTTGACGGTCCGGGCCCACTTTACCCACAATCACGAGATCATCAGGACGTTAGCGAGCACCCGAATAAAGTCCACGAGGAGATCTTCCCACCGGTACTTCCACGGCTACATAACAACCTGTGTTCCTTTTGTGAGCAACGAAACATCCGATATAAACCCACATCGTCTCTTTTCATTCCGCATGATTAGACGACAGATCCCGACATCTTGGCTGTGGATAATCACCAGTGATCAAGCGGATTGCGAAAGATGAACCAAAATCTTCTCCGCACTCCTCACAGGAGGAACACCTGGCCGGCCTCTATCAATTGAGCTGTCCCGCGTCTGCAGTAACTCCTCACTCGCTGGCTCGATGGCTAACTAGCAAAGCACGAGACCAGTTGACAGGATTAGCCGCCCGGCACAACCTCGGGCACGATTGGCCAGATTCAACAGATCCGAATCCGCCAATGCGCTATATCCCCGCATCCTGCCCATCTTCCTCAAAGTGCGGAACTCGCGTCGATCATAACTGTGAAAGCCACTCGCGGCGCGGCGCCGCGCTTGGCCCTGATGATAAGATCTGA

mRNA sequence

ATGCAGAAATTTAGAAGGCGACTCATACCACACTTGAGGTACAGCGGGATGAAGGATCCGAGGCCACCGAGACGACGTGGAGGATCGCGGTACCCGGGCCAGCGGCATACGCTGCCAGCGTGGAGTGCAGAGCCTGTTGTTAAGCGTGCGTCGGGACAGGAGTTCGAGACCACGCTACTTCACTTCATAATTCTAATGGCTTGGAAGCAGGCATGGCATGGCGAATCATGGCGAGACCGGCGTTTCCATGACACGCTCGCCGGTATCATGGCTGACTGTACTTGCTCCCGCGGCGGCTCATGCAACGAGGCGAGTAGTAAGGGATACGGCAGGCTCGGCATGAGAGGAAGACGAGAAGAGAGAGAGAGTTCAATGGGTCCAAGGAGAGAGCAGTATGTGTGGAGCGCGAAGAGAATGATAGGAGTGGGCCGACCAGCGGACCGCCGAAGCCGGGGAAATACGCGGGGACGCGCCGGGGAGGAGATAGGCTTTCGAGAGCTTTCGAGAGAGAGAGAAAACGCGCGGCAGCATCCGCATATGCGTCGCAGCATCGGCTATTATTATTACGGAACCGCGCCACGAACCGCGACCGACAGCAAAGCACGAGACCAGTTGACAGGATTAGCCGCCCGGCACAACCTCGGGCACGATTGGCCAGATTCAACAGATCCGAATCCGCCAATGCGCTATATCCCCGCATCCTGCCCATCTTCCTCAAAGTGCGGAACTCGCGTCGATCATAACTGTGAAAGCCACTCGCGGCGCGGCGCCGCGCTTGGCCCTGATGATAAGATCTGA

Coding sequence (CDS)

ATGCAGAAATTTAGAAGGCGACTCATACCACACTTGAGGTACAGCGGGATGAAGGATCCGAGGCCACCGAGACGACGTGGAGGATCGCGGTACCCGGGCCAGCGGCATACGCTGCCAGCGTGGAGTGCAGAGCCTGTTGTTAAGCGTGCGTCGGGACAGGAGTTCGAGACCACGCTACTTCACTTCATAATTCTAATGGCTTGGAAGCAGGCATGGCATGGCGAATCATGGCGAGACCGGCGTTTCCATGACACGCTCGCCGGTATCATGGCTGACTGTACTTGCTCCCGCGGCGGCTCATGCAACGAGGCGAGTAGTAAGGGATACGGCAGGCTCGGCATGAGAGGAAGACGAGAAGAGAGAGAGAGTTCAATGGGTCCAAGGAGAGAGCAGTATGTGTGGAGCGCGAAGAGAATGATAGGAGTGGGCCGACCAGCGGACCGCCGAAGCCGGGGAAATACGCGGGGACGCGCCGGGGAGGAGATAGGCTTTCGAGAGCTTTCGAGAGAGAGAGAAAACGCGCGGCAGCATCCGCATATGCGTCGCAGCATCGGCTATTATTATTACGGAACCGCGCCACGAACCGCGACCGACAGCAAAGCACGAGACCAGTTGACAGGATTAGCCGCCCGGCACAACCTCGGGCACGATTGGCCAGATTCAACAGATCCGAATCCGCCAATGCGCTATATCCCCGCATCCTGCCCATCTTCCTCAAAGTGCGGAACTCGCGTCGATCATAACTGTGAAAGCCACTCGCGGCGCGGCGCCGCGCTTGGCCCTGATGATAAGATCTGA

Protein sequence

MQKFRRRLIPHLRYSGMKDPRPPRRRGGSRYPGQRHTLPAWSAEPVVKRASGQEFETTLLHFIILMAWKQAWHGESWRDRRFHDTLAGIMADCTCSRGGSCNEASSKGYGRLGMRGRREERESSMGPRREQYVWSAKRMIGVGRPADRRSRGNTRGRAGEEIGFRELSRERENARQHPHMRRSIGYYYYGTAPRTATDSKARDQLTGLAARHNLGHDWPDSTDPNPPMRYIPASCPSSSKCGTRVDHNCESHSRRGAALGPDDKI

Homology

The following BLAST results are available for this feature:

BLAST of Tan0001745 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0001745 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0001745 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0001745 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 245..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..37
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0001745.1	Tan0001745.1	mRNA