Tan0001673 (gene) Snake gourd v1

Overview


Name	Tan0001673
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	agamous-like MADS-box protein AGL80
Location	LG09: 1995565 .. 1996334 (-)
RNA-Seq Expression	Tan0001673
Synteny	Tan0001673

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAAGGAAGAAGGTGAAATTGGCTTACATTGCGAATGACTCTGCAAGAAAAGCGACATTCAAGAAGAGGAAGAGAGGGCTTATGAAGAAAGTGAGTGAATTGAGCACTCTTTGTGGGATTGAAGCTTGTGCAATCGTGTTTAGTCCCTACGATTCTCAGCCTGAGCTCTGGCCTTCCGCCATTGGAGTCCAACGTGTTCTTTCTCAGTTCAAGAAAATGCCTGAGATGGAGCAGAGCAAGAAGATGGTAATTCCCTCCCTCCCTCCCTCCCCCGCTCTTAATTAAATAAAAATTAAATAATTTACAAGATACATGAGTTATTACTCTGTATACAGGTGAATCAAGAGACATTTCTACGACAAAGAATTGCAAAAGCAAACGAGCAATTAAAGAAGATGAGAAAAGATAATCGTGAGAAAGAGATCACGCGGCTGATGTTCCAAAGCCTGACCGGAGCGAAAGGGTTGCAAGCTCTCAACATGGTGGATTTGAACGACCTCGGTTGGCTCATCGATCAGAACTTAAAAGACATCACCAAACGCATAGACTCTCTTAGAAAGCCGCCACCACAGATCACTCAGCCGCTGCCGCCCCCGCCTCAGCCTCAGCCTCAGCCTCAGCCGCCACAGACGGCGGCGTGGCTGATGGAGCTGGTGAGCCCTCAGGATCAGATGGGGTTCGTTGGAGATGATATGCTTTTGCCTTTTGGAGATCATAGCTATAACAACCATAATGCCGCCATGTGGTCTAATGCCTTTTTCCCTTAG

mRNA sequence

ATGACAAGGAAGAAGGTGAAATTGGCTTACATTGCGAATGACTCTGCAAGAAAAGCGACATTCAAGAAGAGGAAGAGAGGGCTTATGAAGAAAGTGAGTGAATTGAGCACTCTTTGTGGGATTGAAGCTTGTGCAATCGTGTTTAGTCCCTACGATTCTCAGCCTGAGCTCTGGCCTTCCGCCATTGGAGTCCAACGTGTTCTTTCTCAGTTCAAGAAAATGCCTGAGATGGAGCAGAGCAAGAAGATGGTGAATCAAGAGACATTTCTACGACAAAGAATTGCAAAAGCAAACGAGCAATTAAAGAAGATGAGAAAAGATAATCGTGAGAAAGAGATCACGCGGCTGATGTTCCAAAGCCTGACCGGAGCGAAAGGGTTGCAAGCTCTCAACATGGTGGATTTGAACGACCTCGGTTGGCTCATCGATCAGAACTTAAAAGACATCACCAAACGCATAGACTCTCTTAGAAAGCCGCCACCACAGATCACTCAGCCGCTGCCGCCCCCGCCTCAGCCTCAGCCTCAGCCTCAGCCGCCACAGACGGCGGCGTGGCTGATGGAGCTGGTGAGCCCTCAGGATCAGATGGGGTTCGTTGGAGATGATATGCTTTTGCCTTTTGGAGATCATAGCTATAACAACCATAATGCCGCCATGTGGTCTAATGCCTTTTTCCCTTAG

Coding sequence (CDS)

ATGACAAGGAAGAAGGTGAAATTGGCTTACATTGCGAATGACTCTGCAAGAAAAGCGACATTCAAGAAGAGGAAGAGAGGGCTTATGAAGAAAGTGAGTGAATTGAGCACTCTTTGTGGGATTGAAGCTTGTGCAATCGTGTTTAGTCCCTACGATTCTCAGCCTGAGCTCTGGCCTTCCGCCATTGGAGTCCAACGTGTTCTTTCTCAGTTCAAGAAAATGCCTGAGATGGAGCAGAGCAAGAAGATGGTGAATCAAGAGACATTTCTACGACAAAGAATTGCAAAAGCAAACGAGCAATTAAAGAAGATGAGAAAAGATAATCGTGAGAAAGAGATCACGCGGCTGATGTTCCAAAGCCTGACCGGAGCGAAAGGGTTGCAAGCTCTCAACATGGTGGATTTGAACGACCTCGGTTGGCTCATCGATCAGAACTTAAAAGACATCACCAAACGCATAGACTCTCTTAGAAAGCCGCCACCACAGATCACTCAGCCGCTGCCGCCCCCGCCTCAGCCTCAGCCTCAGCCTCAGCCGCCACAGACGGCGGCGTGGCTGATGGAGCTGGTGAGCCCTCAGGATCAGATGGGGTTCGTTGGAGATGATATGCTTTTGCCTTTTGGAGATCATAGCTATAACAACCATAATGCCGCCATGTGGTCTAATGCCTTTTTCCCTTAG

Protein sequence

MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPSAIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLTGAKGLQALNMVDLNDLGWLIDQNLKDITKRIDSLRKPPPQITQPLPPPPQPQPQPQPPQTAAWLMELVSPQDQMGFVGDDMLLPFGDHSYNNHNAAMWSNAFFP

Homology

[Close]

BLAST of Tan0001673 vs. ExPASy Swiss-Prot
Match: Q9FJK3 (Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=1 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.3e-53
Identity = 108/163 (66.26%), Postives = 136/163 (83.44%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKKVKLAYI+NDS+RKATFKKRK+GLMKKV ELSTLCGI ACAI++SPYD+ PE+WPS
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61  AIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
             GVQRV+S+F+ +PEM+Q KKMV+QE FL+QRIAKA E L++ RKD+RE E+T +MFQ 
Sbjct: 61  NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120

Query: 121 LTGAKGLQALNMVDLNDLGWLIDQNLKDITKRIDSLRKPPPQI 164
           L G   +  LN+VDLNDLG++I+Q LKD+ +RI+ LR    +I
Sbjct: 121 LIGNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEILRNSGTEI 163

[Close]

BLAST of Tan0001673 vs. ExPASy Swiss-Prot
Match: Q7XJK8 (MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana OX=3702 GN=PHE2 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.1e-34
Identity = 76/154 (49.35%), Postives = 111/154 (72.08%), Query Frame = 0


Query: 3   RKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPSAI 62
           ++K+KL+ I N  +RK TF KRK+G+ KK++EL TLCG+EACA+V+SP++S PE WPS  
Sbjct: 2   KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61

Query: 63  GVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLT 122
           GV+ V+S+F ++  ++++KKMV+QETF+ QRIAK  EQL+K+R +N   +I  LMF  L 
Sbjct: 62  GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELMFGCLK 121

Query: 123 GAKGLQALNMVDLNDLGWLIDQNLKDITKRIDSL 157
           G   +  L+  DL DL   ID+ L  +T+RI+ L
Sbjct: 122 GETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEIL 155

[Close]

BLAST of Tan0001673 vs. ExPASy Swiss-Prot
Match: O80805 (MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana OX=3702 GN=PHE1 PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.6e-33
Identity = 79/168 (47.02%), Postives = 117/168 (69.64%), Query Frame = 0


Query: 3   RKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPSAI 62
           R K+KL++I NDS RK TF KRK+G++KK +EL TLCG++ACA++ SPY+S  E WPS  
Sbjct: 2   RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61

Query: 63  GVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLT 122
           GV+ V+S+F +   ++++KKMV+QETFLRQRIAK  E+L+K+R +NR  +I  LMF  L 
Sbjct: 62  GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDENRNSQIRDLMFGCLK 121

Query: 123 GAKGLQALNMVDLNDLGWLIDQNLKDITKRIDSLRKPPPQITQPLPPP 171
           G   +  L+  DL DL   +++ L  + +R++ L K   + +  +PPP
Sbjct: 122 GEVDVSHLHGRDLLDLNVFLNKYLNGVIRRVEIL-KENGESSSSVPPP 168

[Close]

BLAST of Tan0001673 vs. ExPASy Swiss-Prot
Match: Q7XJK6 (Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana OX=3702 GN=AGL36 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 6.0e-30
Identity = 73/168 (43.45%), Postives = 109/168 (64.88%), Query Frame = 0


Query: 4   KKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPSAIG 63
           KKVKL+ IAN+ +RK +F KRK G+ KK+ ELSTLCG++ACA+++SP+   PE WPS  G
Sbjct: 2   KKVKLSLIANERSRKTSFIKRKDGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  VQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLTG 123
            ++V S+F +MP   ++KKM++QET+L +RI KA EQLK +  +NRE ++ R MF  + G
Sbjct: 62  AKKVASRFLEMPPTARTKKMMDQETYLMERITKAKEQLKNLAAENRELQVRRFMFDCVEG 121

Query: 124 AKGLQALNMVDLNDLGWLIDQNLKDITKRIDSLRKPPPQITQPLPPPP 172
                  +  DL DL   I+  L  +  RI+S+++    +   + P P
Sbjct: 122 KMSQYHYDAKDLQDLQSCINLYLDQLNGRIESIKENGESLLSSVSPFP 169

[Close]

BLAST of Tan0001673 vs. ExPASy Swiss-Prot
Match: Q7XJK5 (Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana OX=3702 GN=AGL90 PE=1 SV=2)

HSP 1 Score: 130.2 bits (326), Expect = 3.0e-29
Identity = 71/168 (42.26%), Postives = 108/168 (64.29%), Query Frame = 0


Query: 4   KKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPSAIG 63
           KKVKL+ IAN+ +RK +F KRK G+ KK+ ELSTLCG++ACA+++SP+   PE WPS  G
Sbjct: 2   KKVKLSLIANERSRKTSFMKRKNGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  VQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLTG 123
            ++V S+F +MP   +++KM++QET L +RI KA EQLK +  +NRE ++ R MF  + G
Sbjct: 62  AKKVASKFLEMPRTARTRKMMDQETHLMERITKAKEQLKNLAAENRELQVRRFMFDCVEG 121

Query: 124 AKGLQALNMVDLNDLGWLIDQNLKDITKRIDSLRKPPPQITQPLPPPP 172
                  +  DL DL   ++  L  +  RI+S+++    +   + P P
Sbjct: 122 KMSQYRYDAKDLQDLLSCMNLYLDQLNGRIESIKENGESLLSSVSPFP 169

[Close]

BLAST of Tan0001673 vs. NCBI nr
Match: XP_023538956.1 (agamous-like MADS-box protein AGL80 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 376.7 bits (966), Expect = 1.4e-100
Identity = 203/227 (89.43%), Postives = 211/227 (92.95%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKKVKLAYI NDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYD+QPELWPS
Sbjct: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60

Query: 61  AIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
            IGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKAN+QLKKMRKDNREKE+TRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120

Query: 121 LTGAKGLQALNMVDLNDLGWLIDQNLKDITKRIDSLRKPPPQITQPLP-PPPQPQPQPQP 180
           LT AKGL ALNM+DLNDL WLIDQNLKDITKRIDSL+KPPP  +QP P P P PQP P P
Sbjct: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPH-SQPHPHPHPHPQP-PPP 180

Query: 181 PQTAAWLMELVSPQDQMGFVGDDMLLPFGDHSYNNHNAAMWSNAFFP 227
           PQTAAWLMELVSPQDQMGFVGDDMLLPFGD +Y +HN AMWSNAFFP
Sbjct: 181 PQTAAWLMELVSPQDQMGFVGDDMLLPFGDQTY-SHNNAMWSNAFFP 224

[Close]

BLAST of Tan0001673 vs. NCBI nr
Match: XP_022968841.1 (agamous-like MADS-box protein AGL80 [Cucurbita maxima])

HSP 1 Score: 374.8 bits (961), Expect = 5.3e-100
Identity = 202/226 (89.38%), Postives = 211/226 (93.36%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKKVKLAYI NDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYD+QPELWPS
Sbjct: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60

Query: 61  AIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
            IGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKAN+QLKKMRKDNREKE+TRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120

Query: 121 LTGAKGLQALNMVDLNDLGWLIDQNLKDITKRIDSLRKPPPQITQPLPPPPQPQPQPQPP 180
           LT AKGL ALNM+DLNDL WLIDQNLKDITKRIDSL+KPPP+ +QP  P P PQP P PP
Sbjct: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPR-SQP-HPHPHPQP-PPPP 180

Query: 181 QTAAWLMELVSPQDQMGFVGDDMLLPFGDHSYNNHNAAMWSNAFFP 227
           QTAAWLMELVSPQDQMGFVGDDMLLPFGD +Y +HN AMWSNAFFP
Sbjct: 181 QTAAWLMELVSPQDQMGFVGDDMLLPFGDQTY-SHNNAMWSNAFFP 222

[Close]

BLAST of Tan0001673 vs. NCBI nr
Match: XP_022961458.1 (agamous-like MADS-box protein AGL80 [Cucurbita moschata] >KAG6590517.1 Agamous-like MADS-box protein AGL80, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024050.1 Agamous-like MADS-box protein AGL80, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 372.1 bits (954), Expect = 3.4e-99
Identity = 201/226 (88.94%), Postives = 209/226 (92.48%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKKVKLAYI NDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYD+QPELWPS
Sbjct: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60

Query: 61  AIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
            IGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKAN+QLKKMRKDNREKE+TRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120

Query: 121 LTGAKGLQALNMVDLNDLGWLIDQNLKDITKRIDSLRKPPPQITQPLPPPPQPQPQPQPP 180
           LT AKGL ALNM+DLNDL WLIDQNLKDITKRIDSL+KPPP  +QP  P P PQP P PP
Sbjct: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPH-SQP-HPHPHPQP-PPPP 180

Query: 181 QTAAWLMELVSPQDQMGFVGDDMLLPFGDHSYNNHNAAMWSNAFFP 227
           QTAAWLMELVSPQDQMGFV DDMLLPFGD +Y +HN AMWSNAFFP
Sbjct: 181 QTAAWLMELVSPQDQMGFVADDMLLPFGDQTY-SHNNAMWSNAFFP 222

[Close]

BLAST of Tan0001673 vs. NCBI nr
Match: XP_008450513.1 (PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis melo] >KAA0050967.1 agamous-like MADS-box protein AGL80 [Cucumis melo var. makuwa] >TYK10313.1 agamous-like MADS-box protein AGL80 [Cucumis melo var. makuwa])

HSP 1 Score: 365.2 bits (936), Expect = 4.2e-97
Identity = 196/226 (86.73%), Postives = 202/226 (89.38%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKKVKLAYIANDSARKAT+KKRKRGLMKKVSELSTLCGIEACAI+FSPYDSQPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  AIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
            IGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTGAKGLQALNMVDLNDLGWLIDQNLKDITKRIDSLRKPPPQITQPLPPPPQPQPQPQPP 180
           LT AKGL  LNM+DLNDLGWLIDQNLKDIT RIDSL+K  P + QP        P    P
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKK--PSLPQPQAQAQAQAPPTTQP 180

Query: 181 QTAAWLMELVSPQDQMGFVGDDMLLPFGDHSYNNHNAAMWSNAFFP 227
           QTAAWLMELVSPQDQMGFVGDDMLLPFGD +Y NHN AMWSNAFFP
Sbjct: 181 QTAAWLMELVSPQDQMGFVGDDMLLPFGDQTY-NHNNAMWSNAFFP 223

[Close]

BLAST of Tan0001673 vs. NCBI nr
Match: XP_004135760.1 (agamous-like MADS-box protein AGL80 [Cucumis sativus] >KGN65990.1 hypothetical protein Csa_006882 [Cucumis sativus])

HSP 1 Score: 362.1 bits (928), Expect = 3.6e-96
Identity = 195/226 (86.28%), Postives = 200/226 (88.50%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKKVKLAYIANDSARKAT+KKRKRGLMKKVSELSTLCGIEACAI+FSPYDSQPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  AIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
            IGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTGAKGLQALNMVDLNDLGWLIDQNLKDITKRIDSLRKPPPQITQPLPPPPQPQPQPQPP 180
           LT AKGL  LNM+DLNDLGWLIDQNLKDIT RIDSL+  P           Q Q  P  P
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQAPPTQP 180

Query: 181 QTAAWLMELVSPQDQMGFVGDDMLLPFGDHSYNNHNAAMWSNAFFP 227
           QTAAWLMELVSPQDQMGFVGDDMLLPFGD +Y NHN AMWSNAFFP
Sbjct: 181 QTAAWLMELVSPQDQMGFVGDDMLLPFGDQTY-NHNNAMWSNAFFP 225

[Close]

BLAST of Tan0001673 vs. ExPASy TrEMBL
Match: A0A6J1HW01 (agamous-like MADS-box protein AGL80 OS=Cucurbita maxima OX=3661 GN=LOC111467976 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.6e-100
Identity = 202/226 (89.38%), Postives = 211/226 (93.36%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKKVKLAYI NDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYD+QPELWPS
Sbjct: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60

Query: 61  AIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
            IGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKAN+QLKKMRKDNREKE+TRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120

Query: 121 LTGAKGLQALNMVDLNDLGWLIDQNLKDITKRIDSLRKPPPQITQPLPPPPQPQPQPQPP 180
           LT AKGL ALNM+DLNDL WLIDQNLKDITKRIDSL+KPPP+ +QP  P P PQP P PP
Sbjct: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPR-SQP-HPHPHPQP-PPPP 180

Query: 181 QTAAWLMELVSPQDQMGFVGDDMLLPFGDHSYNNHNAAMWSNAFFP 227
           QTAAWLMELVSPQDQMGFVGDDMLLPFGD +Y +HN AMWSNAFFP
Sbjct: 181 QTAAWLMELVSPQDQMGFVGDDMLLPFGDQTY-SHNNAMWSNAFFP 222

[Close]

BLAST of Tan0001673 vs. ExPASy TrEMBL
Match: A0A6J1HBW4 (agamous-like MADS-box protein AGL80 OS=Cucurbita moschata OX=3662 GN=LOC111462033 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.7e-99
Identity = 201/226 (88.94%), Postives = 209/226 (92.48%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKKVKLAYI NDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYD+QPELWPS
Sbjct: 1   MTRKKVKLAYIVNDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDAQPELWPS 60

Query: 61  AIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
            IGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKAN+QLKKMRKDNREKE+TRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANDQLKKMRKDNREKEMTRLMFQS 120

Query: 121 LTGAKGLQALNMVDLNDLGWLIDQNLKDITKRIDSLRKPPPQITQPLPPPPQPQPQPQPP 180
           LT AKGL ALNM+DLNDL WLIDQNLKDITKRIDSL+KPPP  +QP  P P PQP P PP
Sbjct: 121 LTAAKGLHALNMLDLNDLTWLIDQNLKDITKRIDSLKKPPPH-SQP-HPHPHPQP-PPPP 180

Query: 181 QTAAWLMELVSPQDQMGFVGDDMLLPFGDHSYNNHNAAMWSNAFFP 227
           QTAAWLMELVSPQDQMGFV DDMLLPFGD +Y +HN AMWSNAFFP
Sbjct: 181 QTAAWLMELVSPQDQMGFVADDMLLPFGDQTY-SHNNAMWSNAFFP 222

[Close]

BLAST of Tan0001673 vs. ExPASy TrEMBL
Match: A0A5A7U988 (Agamous-like MADS-box protein AGL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004670 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 2.0e-97
Identity = 196/226 (86.73%), Postives = 202/226 (89.38%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKKVKLAYIANDSARKAT+KKRKRGLMKKVSELSTLCGIEACAI+FSPYDSQPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  AIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
            IGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTGAKGLQALNMVDLNDLGWLIDQNLKDITKRIDSLRKPPPQITQPLPPPPQPQPQPQPP 180
           LT AKGL  LNM+DLNDLGWLIDQNLKDIT RIDSL+K  P + QP        P    P
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKK--PSLPQPQAQAQAQAPPTTQP 180

Query: 181 QTAAWLMELVSPQDQMGFVGDDMLLPFGDHSYNNHNAAMWSNAFFP 227
           QTAAWLMELVSPQDQMGFVGDDMLLPFGD +Y NHN AMWSNAFFP
Sbjct: 181 QTAAWLMELVSPQDQMGFVGDDMLLPFGDQTY-NHNNAMWSNAFFP 223

[Close]

BLAST of Tan0001673 vs. ExPASy TrEMBL
Match: A0A1S3BPF2 (agamous-like MADS-box protein AGL80 OS=Cucumis melo OX=3656 GN=LOC103492094 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 2.0e-97
Identity = 196/226 (86.73%), Postives = 202/226 (89.38%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKKVKLAYIANDSARKAT+KKRKRGLMKKVSELSTLCGIEACAI+FSPYDSQPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  AIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
            IGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTGAKGLQALNMVDLNDLGWLIDQNLKDITKRIDSLRKPPPQITQPLPPPPQPQPQPQPP 180
           LT AKGL  LNM+DLNDLGWLIDQNLKDIT RIDSL+K  P + QP        P    P
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKK--PSLPQPQAQAQAQAPPTTQP 180

Query: 181 QTAAWLMELVSPQDQMGFVGDDMLLPFGDHSYNNHNAAMWSNAFFP 227
           QTAAWLMELVSPQDQMGFVGDDMLLPFGD +Y NHN AMWSNAFFP
Sbjct: 181 QTAAWLMELVSPQDQMGFVGDDMLLPFGDQTY-NHNNAMWSNAFFP 223

[Close]

BLAST of Tan0001673 vs. ExPASy TrEMBL
Match: A0A0A0LVS3 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G560740 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 1.7e-96
Identity = 195/226 (86.28%), Postives = 200/226 (88.50%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKKVKLAYIANDSARKAT+KKRKRGLMKKVSELSTLCGIEACAI+FSPYDSQPELWPS
Sbjct: 1   MTRKKVKLAYIANDSARKATYKKRKRGLMKKVSELSTLCGIEACAIIFSPYDSQPELWPS 60

Query: 61  AIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
            IGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS
Sbjct: 61  PIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120

Query: 121 LTGAKGLQALNMVDLNDLGWLIDQNLKDITKRIDSLRKPPPQITQPLPPPPQPQPQPQPP 180
           LT AKGL  LNM+DLNDLGWLIDQNLKDIT RIDSL+  P           Q Q  P  P
Sbjct: 121 LTAAKGLHGLNMLDLNDLGWLIDQNLKDITIRIDSLKIKPSSSQPQAQVQAQAQAPPTQP 180

Query: 181 QTAAWLMELVSPQDQMGFVGDDMLLPFGDHSYNNHNAAMWSNAFFP 227
           QTAAWLMELVSPQDQMGFVGDDMLLPFGD +Y NHN AMWSNAFFP
Sbjct: 181 QTAAWLMELVSPQDQMGFVGDDMLLPFGDQTY-NHNNAMWSNAFFP 225

[Close]

BLAST of Tan0001673 vs. TAIR 10
Match: AT5G48670.1 (AGAMOUS-like 80 )

HSP 1 Score: 211.1 bits (536), Expect = 9.4e-55
Identity = 108/163 (66.26%), Postives = 136/163 (83.44%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKKVKLAYI+NDS+RKATFKKRK+GLMKKV ELSTLCGI ACAI++SPYD+ PE+WPS
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61  AIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
             GVQRV+S+F+ +PEM+Q KKMV+QE FL+QRIAKA E L++ RKD+RE E+T +MFQ 
Sbjct: 61  NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120

Query: 121 LTGAKGLQALNMVDLNDLGWLIDQNLKDITKRIDSLRKPPPQI 164
           L G   +  LN+VDLNDLG++I+Q LKD+ +RI+ LR    +I
Sbjct: 121 LIGNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEILRNSGTEI 163

[Close]

BLAST of Tan0001673 vs. TAIR 10
Match: AT5G26630.1 (MADS-box transcription factor family protein )

HSP 1 Score: 154.8 bits (390), Expect = 8.0e-38
Identity = 84/179 (46.93%), Postives = 122/179 (68.16%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTR+KVK+ +I N++ARK+TFKKRK+GL+KK  EL  LCG+   A+V SPY+  PE+WPS
Sbjct: 1   MTRQKVKMTFIENETARKSTFKKRKKGLLKKAQELGILCGVPIFAVVNSPYELNPEVWPS 60

Query: 61  AIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
                +V+SQ+K M  M+++KKMVNQETFL+QRI KA E  KK+RK+N+E E+  +MF  
Sbjct: 61  REAANQVVSQWKTMSVMDKTKKMVNQETFLQQRITKATESWKKLRKENKELEMKNIMFDC 120

Query: 121 LTGAKGLQALNMVDLNDLGWLIDQNLKDITKRIDSLRK--PPPQITQPLPPPPQPQPQP 178
           L+G   + ++   +L D G++I+Q LKD+ +RI+ L++   P     P+  P      P
Sbjct: 121 LSGKTLVSSIEKTELRDFGYVIEQQLKDVNRRIEILKRNNEPSSALVPVAAPTTSSVMP 179

[Close]

BLAST of Tan0001673 vs. TAIR 10
Match: AT1G65300.1 (AGAMOUS-like 38 )

HSP 1 Score: 148.3 bits (373), Expect = 7.5e-36
Identity = 76/154 (49.35%), Postives = 111/154 (72.08%), Query Frame = 0


Query: 3   RKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPSAI 62
           ++K+KL+ I N  +RK TF KRK+G+ KK++EL TLCG+EACA+V+SP++S PE WPS  
Sbjct: 2   KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61

Query: 63  GVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQSLT 122
           GV+ V+S+F ++  ++++KKMV+QETF+ QRIAK  EQL+K+R +N   +I  LMF  L 
Sbjct: 62  GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELMFGCLK 121

Query: 123 GAKGLQALNMVDLNDLGWLIDQNLKDITKRIDSL 157
           G   +  L+  DL DL   ID+ L  +T+RI+ L
Sbjct: 122 GETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEIL 155

[Close]

BLAST of Tan0001673 vs. TAIR 10
Match: AT3G05860.1 (MADS-box transcription factor family protein )

HSP 1 Score: 142.9 bits (359), Expect = 3.2e-34
Identity = 79/151 (52.32%), Postives = 107/151 (70.86%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKK+ L+YI N+S RKATF KRK+GL+KK+ ELS LCGIEACA+++SP++S PE+WPS
Sbjct: 1   MTRKKLNLSYITNESMRKATFNKRKKGLVKKIHELSVLCGIEACAVIYSPFNSNPEVWPS 60

Query: 61  AIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
              V+ V+  F+ + ++EQ KKMV+ E F+RQ I+K  E   K   DN E+ +   MFQ 
Sbjct: 61  NSEVKNVMENFEMLTKLEQEKKMVSHEGFIRQNISKTMESNNKKMIDNAERTMKEAMFQL 120

Query: 121 LTGAKGLQALNMVDLN--DLGWLIDQNLKDI 150
           L+G KG + LN+ D N  DL   IDQ LK++
Sbjct: 121 LSG-KG-EKLNLTDRNREDLCKYIDQYLKEL 149

[Close]

BLAST of Tan0001673 vs. TAIR 10
Match: AT3G05860.2 (MADS-box transcription factor family protein )

HSP 1 Score: 142.9 bits (359), Expect = 3.2e-34
Identity = 79/151 (52.32%), Postives = 107/151 (70.86%), Query Frame = 0


Query: 1   MTRKKVKLAYIANDSARKATFKKRKRGLMKKVSELSTLCGIEACAIVFSPYDSQPELWPS 60
           MTRKK+ L+YI N+S RKATF KRK+GL+KK+ ELS LCGIEACA+++SP++S PE+WPS
Sbjct: 1   MTRKKLNLSYITNESMRKATFNKRKKGLVKKIHELSVLCGIEACAVIYSPFNSNPEVWPS 60

Query: 61  AIGVQRVLSQFKKMPEMEQSKKMVNQETFLRQRIAKANEQLKKMRKDNREKEITRLMFQS 120
              V+ V+  F+ + ++EQ KKMV+ E F+RQ I+K  E   K   DN E+ +   MFQ 
Sbjct: 61  NSEVKNVMENFEMLTKLEQEKKMVSHEGFIRQNISKTMESNNKKMIDNAERTMKEAMFQL 120

Query: 121 LTGAKGLQALNMVDLN--DLGWLIDQNLKDI 150
           L+G KG + LN+ D N  DL   IDQ LK++
Sbjct: 121 LSG-KG-EKLNLTDRNREDLCKYIDQYLKEL 149

The following BLAST results are available for this feature:

BLAST of Tan0001673 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJK3	1.3e-53	66.26	Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=...	[more]
Q7XJK8	1.1e-34	49.35	MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana OX=3702 GN=PHE2 P...	[more]
O80805	7.6e-33	47.02	MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana OX=3702 GN=PHE1 P...	[more]
Q7XJK6	6.0e-30	43.45	Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana OX=3702 GN=AGL36 PE=...	[more]
Q7XJK5	3.0e-29	42.26	Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana OX=3702 GN=AGL90 PE=...	[more]

BLAST of Tan0001673 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538956.1	1.4e-100	89.43	agamous-like MADS-box protein AGL80 [Cucurbita pepo subsp. pepo]	[more]
XP_022968841.1	5.3e-100	89.38	agamous-like MADS-box protein AGL80 [Cucurbita maxima]	[more]
XP_022961458.1	3.4e-99	88.94	agamous-like MADS-box protein AGL80 [Cucurbita moschata] >KAG6590517.1 Agamous-l...	[more]
XP_008450513.1	4.2e-97	86.73	PREDICTED: agamous-like MADS-box protein AGL80 [Cucumis melo] >KAA0050967.1 agam...	[more]
XP_004135760.1	3.6e-96	86.28	agamous-like MADS-box protein AGL80 [Cucumis sativus] >KGN65990.1 hypothetical p...	[more]

BLAST of Tan0001673 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HW01	2.6e-100	89.38	agamous-like MADS-box protein AGL80 OS=Cucurbita maxima OX=3661 GN=LOC111467976 ...	[more]
A0A6J1HBW4	1.7e-99	88.94	agamous-like MADS-box protein AGL80 OS=Cucurbita moschata OX=3662 GN=LOC11146203...	[more]
A0A5A7U988	2.0e-97	86.73	Agamous-like MADS-box protein AGL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3BPF2	2.0e-97	86.73	agamous-like MADS-box protein AGL80 OS=Cucumis melo OX=3656 GN=LOC103492094 PE=4...	[more]
A0A0A0LVS3	1.7e-96	86.28	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G560740 PE...	[more]

BLAST of Tan0001673 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48670.1	9.4e-55	66.26	AGAMOUS-like 80	[more]
AT5G26630.1	8.0e-38	46.93	MADS-box transcription factor family protein	[more]
AT1G65300.1	7.5e-36	49.35	AGAMOUS-like 38	[more]
AT3G05860.1	3.2e-34	52.32	MADS-box transcription factor family protein	[more]
AT3G05860.2	3.2e-34	52.32	MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 87..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 156..180
None	No IPR available	PANTHER	PTHR48019:SF17	AGAMOUS-LIKE MADS-BOX PROTEIN AGL80	coord: 1..182
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 1..182
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 38..59 score: 29.15 coord: 23..38 score: 62.47 coord: 3..23 score: 39.48
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 8.4E-26 score: 101.7
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 11..51 e-value: 6.5E-19 score: 67.2
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..49 score: 17.661095
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..115 e-value: 5.4E-20 score: 73.3
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 1..85
IPR033897	MADS SRF-like	CDD	cd00266	MADS_SRF_like	coord: 2..85 e-value: 5.66933E-35 score: 117.746

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0001673.1	Tan0001673.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0000987	cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding