Tan0001589 (gene) Snake gourd v1

Overview


Name	Tan0001589
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Autophagy-related protein
Location	LG06: 5079471 .. 5081470 (+)
RNA-Seq Expression	Tan0001589
Synteny	Tan0001589

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTATCCCCGCTTGATGTTTATCATTCAAAGTTTAAATAATAAATAATAGTTTATTATCACTTCTTTTTATTGCCTGCGTTCTTTCAATTCGTACGGCATCGCAAAGAGAGCGCTAATGGGAAAAGCCAATTCCTTCAAGAACGAGTTCTCCTACGGTATGATTGACCTTTCTGTGGCTTGAAATTCGAGATGATTTTCGTTCTTTTTCATCAATTTTTTTCTTGTTTCTTATTTTTGAAGATCGGTGTTTAATTATGGCGTTGAATTTTTCGTAGAACAACGATTTGAGGAGTCGTTCGATGTCTTGGCCAAGTATCCTGATCGAGTCCCCGTAAGTTGCAAAATTATCATCATCTGTATCTTTGATTTGAGAAGATTCGGTTCTTGTTGCATCTGTTTTGGATTTTACCGAGAAATTATAGATATTGGTGAATTTGTGAATTAGGTCGATATATATTACCGGTGACTCAGAAAGTCCGCAGGTGTCGAATTCTTTGGTTTTATCCTTTTTTCTCTTGGTAGACGCGTTATCGTTAAGAAATCTCTACGGAATAGCTCGCGTAATTTGCTATGTAGGATGTTTTTCAAATAAATTCTCTCGGGAAATGAAATACGAAAGTTATCATATGATTTTCGTCGATGTTTTCTTTGTTATCTAAGAACAAATTTGTATGTGGATTTCTGCACAAAATCGTGGATAGAAGCTGCTTTGTTGATTGTATTCAAGCAATGCAAAGGCGAAGTCAATTTTGATAGCCTTGAACAGAGCAATAGAAAGAAACATTCATTTATGCAATCTTCTTTTGTTTTTGAGGTGTAAATGCTAGCTAGGTATTCATTTCCTCCAAAATCCATGAAAGCGAATTAATAGTTTTTCTCTTGATGTTTTGAGTATAATTGCAGGTAATTGTTGAGAGATATGAGAAATGTGAATTTCCTGAAATGGAAAAGAAGAAGTAAGTTCCTCCAGCATTTCTGAGCTTCCCCAATGTTTCAGTTCTGCATATTTCATTTACCTTTCTCTGAAAATCAATTGAATGAAAACAGATACCATCTATCACCAGAGCATAACACTCTTTGACTTCTTGATTGGTAATGTTTGGTTTTTGTTTGCCTATAATAGAATCTTTCTGGCTATCTATTACATGATCATCCCAAAAATTTGCATGTTATTTATTTATTTACACCTTTAGAAAACATAGTCTCGCGTACTGTTTAGAGGTAACAGTGTGATAAAGTTGAATTATGTTTATGTTATAAAACCCATTGTATTCCAAAGTTTTCTCTCCTCGTACGATACATTTTGTATTCAATGACCGCAGAACTATATTTGAAAGCCAGTTGTGATCCTGACAAAACATGTTACATGACATATTTTGTCAATGCAGTTTTGCTTTCTGTATTGAATGTCGTTTGTTTTGTTATTGACTAAAGGTACCTCATTCCTCGAGACATGTCCGTTGGGCAATTCATCCATGTTCTGAGCACCAGGCTTCGTCTAGCCCCGGGAAAAGCTCTCTTTGTATTTGTAAAGAATACTTTGCCTCAAACAGGTAGGGTTACATTTCAGCTGATGCTGCTGCCCATTTTTACGTGCATTCTCGTGCAACAAGTCTTTTAAATGCTAGTTACTAACATGCTAATAATTAACTTCAAATTTTGCAGCTAGCTTAATGAGTACCGTGTACGAATCATACAAGGACGACGATGGCTTTCTGTACATGTGTTACAGCAGTGAAAAGACCTTTGGCTAAGCTAATCAATCTGATTGAGATTTGCTGTTGTATATTTCTGCTGCTACTTCTGTTGTGAATATATTCCATGAACAAACAAATTTGTTTTCACCATGTGGACACTATATAAAAAGTGTAAATCATCCTTCATATTGTATATTCTATCAAATTTAAATCATGTAATTGTTTCAAAGGTGCAGAAAGATGAAATCTACTAGCCATGGCCTGGGGCTGTCAACATAGGATGTGCCTATATATTGAACAAA

mRNA sequence

GCTATCCCCGCTTGATGTTTATCATTCAAAGTTTAAATAATAAATAATAGTTTATTATCACTTCTTTTTATTGCCTGCGTTCTTTCAATTCGTACGGCATCGCAAAGAGAGCGCTAATGGGAAAAGCCAATTCCTTCAAGAACGAGTTCTCCTACGAACAACGATTTGAGGAGTCGTTCGATGTCTTGGCCAAGTATCCTGATCGAGTCCCCGTAATTGTTGAGAGATATGAGAAATGTGAATTTCCTGAAATGGAAAAGAAGAAGTACCTCATTCCTCGAGACATGTCCGTTGGGCAATTCATCCATGTTCTGAGCACCAGGCTTCGTCTAGCCCCGGGAAAAGCTCTCTTTGTATTTGTAAAGAATACTTTGCCTCAAACAGCTAGCTTAATGAGTACCGTGTACGAATCATACAAGGACGACGATGGCTTTCTGTACATGTGTTACAGCAGTGAAAAGACCTTTGGCTAAGCTAATCAATCTGATTGAGATTTGCTGTTGTATATTTCTGCTGCTACTTCTGTTGTGAATATATTCCATGAACAAACAAATTTGTTTTCACCATGTGGACACTATATAAAAAGTGTAAATCATCCTTCATATTGTATATTCTATCAAATTTAAATCATGTAATTGTTTCAAAGGTGCAGAAAGATGAAATCTACTAGCCATGGCCTGGGGCTGTCAACATAGGATGTGCCTATATATTGAACAAA

Coding sequence (CDS)

ATGGGAAAAGCCAATTCCTTCAAGAACGAGTTCTCCTACGAACAACGATTTGAGGAGTCGTTCGATGTCTTGGCCAAGTATCCTGATCGAGTCCCCGTAATTGTTGAGAGATATGAGAAATGTGAATTTCCTGAAATGGAAAAGAAGAAGTACCTCATTCCTCGAGACATGTCCGTTGGGCAATTCATCCATGTTCTGAGCACCAGGCTTCGTCTAGCCCCGGGAAAAGCTCTCTTTGTATTTGTAAAGAATACTTTGCCTCAAACAGCTAGCTTAATGAGTACCGTGTACGAATCATACAAGGACGACGATGGCTTTCTGTACATGTGTTACAGCAGTGAAAAGACCTTTGGCTAA

Protein sequence

MGKANSFKNEFSYEQRFEESFDVLAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG

Homology

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BLAST of Tan0001589 vs. ExPASy Swiss-Prot
Match: Q9LRP7 (Autophagy-related protein 8i OS=Arabidopsis thaliana OX=3702 GN=ATG8I PE=1 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 8.0e-42
Identity = 78/113 (69.03%), Postives = 98/113 (86.73%), Query Frame = 0


Query: 6   SFKNEFSYEQRFEESFDVLAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIHV 65
           SFK +++ ++R  ES +++AKYP R+PVI E+Y K + P +EKKK+L+PRDMSVGQFI++
Sbjct: 3   SFKEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIYI 62

Query: 66  LSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           LS RL L+PGKALFVFV NTLPQTA+LM +VYESYKDDDGF+YMCYSSEKTFG
Sbjct: 63  LSARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTFG 115

[Close]

BLAST of Tan0001589 vs. ExPASy Swiss-Prot
Match: Q8S925 (Autophagy-related protein 8h OS=Arabidopsis thaliana OX=3702 GN=ATG8H PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.3e-39
Identity = 72/113 (63.72%), Postives = 97/113 (85.84%), Query Frame = 0


Query: 6   SFKNEFSYEQRFEESFDVLAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIHV 65
           SFK++FS ++R +ES +++AKYPDR+PVI+E+Y   + P+MEK KYL+PRDM+VG FIH+
Sbjct: 7   SFKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIHM 66

Query: 66  LSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           LS R++L P KALFVFV NTLPQTAS M ++Y ++K++DGFLYMCYS+EKTFG
Sbjct: 67  LSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119

[Close]

BLAST of Tan0001589 vs. ExPASy Swiss-Prot
Match: Q2RBS4 (Autophagy-related protein 8D OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8D PE=3 SV=2)

HSP 1 Score: 158.3 bits (399), Expect = 5.3e-38
Identity = 76/117 (64.96%), Postives = 94/117 (80.34%), Query Frame = 0


Query: 3   KANSFKNEFSYEQRFEESFDVLAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQF 62
           K   FK EF+ E+R +ES  ++A YPDR+PVIVE++ +   PEMEK+KYL+P +M VGQF
Sbjct: 2   KPRPFKEEFTLEERAKESAAMIASYPDRIPVIVEKFSRSNLPEMEKRKYLVPCNMPVGQF 61

Query: 63  IHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDD-DGFLYMCYSSEKTFG 119
           I +L +RL L+PG ALFVFV NTLPQTA LM +VYESYKD+ DGFLY+CYSSEKTFG
Sbjct: 62  IFILRSRLHLSPGTALFVFVNNTLPQTAQLMGSVYESYKDEGDGFLYLCYSSEKTFG 118

[Close]

BLAST of Tan0001589 vs. ExPASy Swiss-Prot
Match: Q9SL04 (Autophagy-related protein 8d OS=Arabidopsis thaliana OX=3702 GN=ATG8D PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.4e-33
Identity = 64/114 (56.14%), Postives = 91/114 (79.82%), Query Frame = 0


Query: 5   NSFKNEFSYEQRFEESFDVLAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIH 64
           +SFK+E   E+R  E+  +  KYPDR+PVIVER EK + P++++KKYL+P D++VGQF++
Sbjct: 4   SSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVY 63

Query: 65  VLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           V+  R++L+P KA+F+FVKN LP TA++MS +YE +KD+DGFLYM YS E TFG
Sbjct: 64  VVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117

[Close]

BLAST of Tan0001589 vs. ExPASy Swiss-Prot
Match: Q2XPP5 (Autophagy-related protein 8A OS=Oryza sativa subsp. indica OX=39946 GN=ATG8A PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.3e-33
Identity = 68/113 (60.18%), Postives = 88/113 (77.88%), Query Frame = 0


Query: 6   SFKNEFSYEQRFEESFDVLAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIHV 65
           SFK E   E+R  ES  +  KY DR+PVIVE+ +K + PE++KKKYL+P D++VGQF++V
Sbjct: 5   SFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYV 64

Query: 66  LSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           +  R++L+P KA+FVFVKNTLP TASLMS +YE  KD+DGFLYM YS E TFG
Sbjct: 65  VRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Tan0001589 vs. NCBI nr
Match: XP_023004698.1 (autophagy-related protein 8i-like [Cucurbita maxima])

HSP 1 Score: 232.3 bits (591), Expect = 2.2e-57
Identity = 113/118 (95.76%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MGKANSFKNEFSYEQRFEESFDVLAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
           MGKA SFKNEFSYEQR EESF++L KYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG
Sbjct: 1   MGKAKSFKNEFSYEQRLEESFEILIKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Tan0001589 vs. NCBI nr
Match: KAG6593267.1 (Autophagy-related protein 8i, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 229.2 bits (583), Expect = 1.9e-56
Identity = 112/118 (94.92%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MGKANSFKNEFSYEQRFEESFDVLAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
           MGKA SFKNEFSYEQR EESF++L KYPDRVPVIVERYEKCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Tan0001589 vs. NCBI nr
Match: XP_023513717.1 (autophagy-related protein 8i-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228.8 bits (582), Expect = 2.5e-56
Identity = 112/118 (94.92%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MGKANSFKNEFSYEQRFEESFDVLAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
           MGKA SFKNEFSY QR EESF++L KYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG
Sbjct: 1   MGKAKSFKNEFSYVQRSEESFEILIKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Tan0001589 vs. NCBI nr
Match: KAG7025617.1 (Autophagy-related protein 8i [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 228.4 bits (581), Expect = 3.2e-56
Identity = 111/118 (94.07%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MGKANSFKNEFSYEQRFEESFDVLAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
           MGKA SFKNEFSYEQR EESF++L KYPDRVPVIVERYEKCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTR+RLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRIRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Tan0001589 vs. NCBI nr
Match: XP_022960552.1 (autophagy-related protein 8i-like [Cucurbita moschata])

HSP 1 Score: 227.6 bits (579), Expect = 5.5e-56
Identity = 111/118 (94.07%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 1   MGKANSFKNEFSYEQRFEESFDVLAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
           MGKA SFKNEFSYEQR EESF++L KYPDRVPVIVERYEKCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMST YESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Tan0001589 vs. ExPASy TrEMBL
Match: A0A6J1L0B7 (Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111497916 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 113/118 (95.76%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MGKANSFKNEFSYEQRFEESFDVLAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
           MGKA SFKNEFSYEQR EESF++L KYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG
Sbjct: 1   MGKAKSFKNEFSYEQRLEESFEILIKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Tan0001589 vs. ExPASy TrEMBL
Match: A0A6J1H7R2 (Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111461254 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.6e-56
Identity = 111/118 (94.07%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 1   MGKANSFKNEFSYEQRFEESFDVLAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
           MGKA SFKNEFSYEQR EESF++L KYPDRVPVIVERYEKCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKAKSFKNEFSYEQRSEESFEILIKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMST YESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTAYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Tan0001589 vs. ExPASy TrEMBL
Match: A0A6J1GQC4 (Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111456510 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 3.8e-55
Identity = 108/118 (91.53%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MGKANSFKNEFSYEQRFEESFDVLAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
           MGK  SFK+EF+YEQRF ESF++LAKYPDRVPVIVERYEKCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTRL LAPGKALFVFVKNTLPQTASLM TVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Tan0001589 vs. ExPASy TrEMBL
Match: A0A5D3CGI6 (Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00040 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 6.5e-55
Identity = 108/118 (91.53%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 1   MGKANSFKNEFSYEQRFEESFDVLAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
           MG+  SFK+EF+YEQRFEESF+VLAKYPDRVPVIVERY KCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGRTKSFKDEFTYEQRFEESFEVLAKYPDRVPVIVERYGKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLSTRLRLAPGKALFVFV NTLPQTASLMSTVY+SYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLRLAPGKALFVFVNNTLPQTASLMSTVYDSYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Tan0001589 vs. ExPASy TrEMBL
Match: A0A6J1CW54 (Autophagy-related protein OS=Momordica charantia OX=3673 GN=LOC111014838 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 6.5e-55
Identity = 106/118 (89.83%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MGKANSFKNEFSYEQRFEESFDVLAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVG 60
           MGK+ SFKNEF+YEQRFEE+F++LAKYPDRVPVIVERY+KCE PEMEKKKYLIPRDMSVG
Sbjct: 1   MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           QFIHVLS RL LAPGKALFVFVKNTLPQTASLMS+VYESYKDDDGFLYMCYS+EKTFG
Sbjct: 61  QFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESYKDDDGFLYMCYSTEKTFG 118

[Close]

BLAST of Tan0001589 vs. TAIR 10
Match: AT3G15580.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 171.0 bits (432), Expect = 5.7e-43
Identity = 78/113 (69.03%), Postives = 98/113 (86.73%), Query Frame = 0


Query: 6   SFKNEFSYEQRFEESFDVLAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIHV 65
           SFK +++ ++R  ES +++AKYP R+PVI E+Y K + P +EKKK+L+PRDMSVGQFI++
Sbjct: 3   SFKEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIYI 62

Query: 66  LSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           LS RL L+PGKALFVFV NTLPQTA+LM +VYESYKDDDGF+YMCYSSEKTFG
Sbjct: 63  LSARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTFG 115

[Close]

BLAST of Tan0001589 vs. TAIR 10
Match: AT3G06420.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 163.7 bits (413), Expect = 9.0e-41
Identity = 72/113 (63.72%), Postives = 97/113 (85.84%), Query Frame = 0


Query: 6   SFKNEFSYEQRFEESFDVLAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIHV 65
           SFK++FS ++R +ES +++AKYPDR+PVI+E+Y   + P+MEK KYL+PRDM+VG FIH+
Sbjct: 7   SFKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIHM 66

Query: 66  LSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           LS R++L P KALFVFV NTLPQTAS M ++Y ++K++DGFLYMCYS+EKTFG
Sbjct: 67  LSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119

[Close]

BLAST of Tan0001589 vs. TAIR 10
Match: AT2G05630.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 143.7 bits (361), Expect = 9.7e-35
Identity = 64/114 (56.14%), Postives = 91/114 (79.82%), Query Frame = 0


Query: 5   NSFKNEFSYEQRFEESFDVLAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIH 64
           +SFK+E   E+R  E+  +  KYPDR+PVIVER EK + P++++KKYL+P D++VGQF++
Sbjct: 4   SSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVY 63

Query: 65  VLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           V+  R++L+P KA+F+FVKN LP TA++MS +YE +KD+DGFLYM YS E TFG
Sbjct: 64  VVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117

[Close]

BLAST of Tan0001589 vs. TAIR 10
Match: AT4G04620.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 139.4 bits (350), Expect = 1.8e-33
Identity = 65/114 (57.02%), Postives = 87/114 (76.32%), Query Frame = 0


Query: 5   NSFKNEFSYEQRFEESFDVLAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIH 64
           NSFK     E R  ES  + AKYP+RVPVIVE+  + + P+++KKKYL+P D+++GQF++
Sbjct: 4   NSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQFVY 63

Query: 65  VLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           V+  R++L   KA+FVFVKNTLP TA+LMS +YE +KD+DGFLYM YS E TFG
Sbjct: 64  VVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Tan0001589 vs. TAIR 10
Match: AT4G04620.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 139.4 bits (350), Expect = 1.8e-33
Identity = 65/114 (57.02%), Postives = 87/114 (76.32%), Query Frame = 0


Query: 5   NSFKNEFSYEQRFEESFDVLAKYPDRVPVIVERYEKCEFPEMEKKKYLIPRDMSVGQFIH 64
           NSFK     E R  ES  + AKYP+RVPVIVE+  + + P+++KKKYL+P D+++GQF++
Sbjct: 4   NSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQFVY 63

Query: 65  VLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 119
           V+  R++L   KA+FVFVKNTLP TA+LMS +YE +KD+DGFLYM YS E TFG
Sbjct: 64  VVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117

The following BLAST results are available for this feature:

BLAST of Tan0001589 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRP7	8.0e-42	69.03	Autophagy-related protein 8i OS=Arabidopsis thaliana OX=3702 GN=ATG8I PE=1 SV=1	[more]
Q8S925	1.3e-39	63.72	Autophagy-related protein 8h OS=Arabidopsis thaliana OX=3702 GN=ATG8H PE=1 SV=1	[more]
Q2RBS4	5.3e-38	64.96	Autophagy-related protein 8D OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8D P...	[more]
Q9SL04	1.4e-33	56.14	Autophagy-related protein 8d OS=Arabidopsis thaliana OX=3702 GN=ATG8D PE=1 SV=1	[more]
Q2XPP5	2.3e-33	60.18	Autophagy-related protein 8A OS=Oryza sativa subsp. indica OX=39946 GN=ATG8A PE=...	[more]

BLAST of Tan0001589 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023004698.1	2.2e-57	95.76	autophagy-related protein 8i-like [Cucurbita maxima]	[more]
KAG6593267.1	1.9e-56	94.92	Autophagy-related protein 8i, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023513717.1	2.5e-56	94.92	autophagy-related protein 8i-like [Cucurbita pepo subsp. pepo]	[more]
KAG7025617.1	3.2e-56	94.07	Autophagy-related protein 8i [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022960552.1	5.5e-56	94.07	autophagy-related protein 8i-like [Cucurbita moschata]	[more]

BLAST of Tan0001589 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L0B7	1.1e-57	95.76	Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111497916 PE=3 SV=1	[more]
A0A6J1H7R2	2.6e-56	94.07	Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111461254 PE=3 SV=...	[more]
A0A6J1GQC4	3.8e-55	91.53	Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111456510 PE=3 SV=...	[more]
A0A5D3CGI6	6.5e-55	91.53	Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1CW54	6.5e-55	89.83	Autophagy-related protein OS=Momordica charantia OX=3673 GN=LOC111014838 PE=3 SV...	[more]

BLAST of Tan0001589 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15580.1	5.7e-43	69.03	Ubiquitin-like superfamily protein	[more]
AT3G06420.1	9.0e-41	63.72	Ubiquitin-like superfamily protein	[more]
AT2G05630.1	9.7e-35	56.14	Ubiquitin-like superfamily protein	[more]
AT4G04620.1	1.8e-33	57.02	Ubiquitin-like superfamily protein	[more]
AT4G04620.2	1.8e-33	57.02	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004241	Autophagy protein Atg8 ubiquitin-like	PFAM	PF02991	Atg8	coord: 15..118 e-value: 5.8E-43 score: 145.3
IPR004241	Autophagy protein Atg8 ubiquitin-like	PANTHER	PTHR10969	MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED	coord: 1..118
None	No IPR available	GENE3D	3.10.20.90		coord: 1..118 e-value: 8.3E-49 score: 166.6
None	No IPR available	PANTHER	PTHR10969:SF81	AUTOPHAGY-RELATED PROTEIN	coord: 1..118
None	No IPR available	CDD	cd16108	Ubl_ATG8_like	coord: 29..113 e-value: 5.97889E-47 score: 143.873
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 6..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0001589.1	Tan0001589.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0006995	cellular response to nitrogen starvation
cellular_component	GO:0016020	membrane
cellular_component	GO:0005874	microtubule