
Tan0001538 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCCACTATAAATCTCCACCATTTCCCTGATTAGGGTTTTTATTCATTCTCAGCCGTCGCCGTCGCCGTCGCCGTTCCAGCTCCAGAGAGAGAGTCAGAGAGTTGCATTAGGAAAAGATGAAGACGATCCTCTCATCGGAAACTATGGACATCCCCGAGGGGGTGAAGATCAAAGTGAACGCCAAAATCATCGAGGTCGAAGGCCCTCGGGGGAAACTCACTCGCAACTTCAAGCATCTGAATCTTGATTTCCAGTTGATCACCGAAGAGGGTACCGGAAAGAAGAAGCTCAAGATCGATGCCTGGTTCGGCTCCAGGAAGACTTCTGCTGCCATTCGTACTGCCCTTAGCCATGTTGAGAATCTCATCACTGGTGTCACCAAGGGCTACCGTTACAAGATGCGATTTGTTTATGCTCACTTTCCTATCAATGCTAGCATCACCAACGGCAACAAGGCTATCGAGATCCGTAACTTTCTTGGTGAGAAAAAGGTATAACTCTCTCCCTCACTTTATTCTCATAATTTGCACTATTTGGATTATGGATTTGTATTTGCTGCCGCGTTTGCATTTTTTACCCTAATTGAATGTTGAATAATCGAGTCTTAAGTGTTAGTCAGGATTGGTTGACTACTCTTTTAAACTAATTCATGAATGATGCCCTAGCCCTTTGCAATATTGTTCTTTTTCATCCTTCTTCCGTAATTATTTTGGCCCTAGCCCTTTGAAGAGCATATGTTTGAAAACAGAACAGTTTTTATTTATTTTTACATTATCTTTATTTGATTTGATTCTCCGCCAGGGCTATGGTTTAATTTCAGTAACTCCTCAATTAGTAAAATTATCTCTTTAGTGGAATCTATTATTGGGGCATTTTGTGGTTTTGAAATGTTATGGAAAACAAAGAATACAAACGATAAGGTTCAGTTGATTGTAACGAAAATTTACAAGGAAAGACTGTGTTCGGTAAAACAGTTTGTGGGGATTGGGAAGTTGAGTTAGATGTCAAATACAGTAGAAGGAGATGCAGAGAGGGAAGGAGGTCAGATGGATGGGGATGAAGATGTATCTCTTTTTTTTGTTGTTGTGTGCGCGTTTGTTTTGCGTGTGGTTAAAAACTACTTTAAAAAGCAAGTCTGCGAGTGCATTGAAAAGAAATAGGTTACATTGACTACAGTCCTTTGAGTATTTCAGCCAAAGTACAAGTATCATAAAATTTAAACAAGTATCGAAACGGAGCTATTATGTACTCCCAAACAATTATTTGAAACCCCCCTCCTCCTCTTTTGTATGAAGTATTGAAACTATTGTTCTTTTCTATTGGTATGATGCTTGGATGTGATGTCTCTGTCTTTTCTGTGCAATAGGTGCGAAAGGTAGATATGCTTGATGGAGTATCTATTCTTCGATCTGAGAAGGTCAAAGATGAGTTAGTCTTGGATGGTAATGATATTGAGCTCGTATCTCGGTCTGCTGCCTTGATAAACCAGGTCTCTCTTCCATGCTACTTTGTGATTGATTCTTGCTTGCAAAACTTCGCCTGCACAGGCATAATCAGTTTTATACTCACTTTTTTCTTTTCTTCTGGGTGACAGAAATGCCATGTCAAGAACAAAGATATCAGGAAGTTCCTTGATGGTATTTATGTCAGCGAAAAGGGAACTGTTCTTGACGAGGAGTGAAGATCATGAGTAGTTTTGTTCAACCATGCTTTGGCTTTGGGTGATTGTTTCTTCTTATATATTTATATTTCATTCGTAGACAAATTCGTGAAAGCTGGGTTTTGAAAGGAAAAAAAAACTTATCGTAGACAAATTCTCGAGCTTTTTGGACACTTGTAATGGCTGATGGATGGAGTAAATGCCAGTTTTCATTGTTTGGTTTGTTTTGAGAGTTTCTATTTCCAAAAGACTTAATTTTGTTCCTATCTGTAGGGTTGAGAATGTTGTCCATTTTTCAATTTATAGTTAAATTAGTAGTATGGTGAAGCAATTGTTGATTGTGGATGCAGTTCTTGTTCCTCTGGGCCCTAAAATTTTGCTCTTATAATATTAACATCAACTTACATCGATGGTAAGCTATGATTGAAGACTGCAGAACTGCCCTCATAACTTTTGGTTTTTATCAAGTTCTCTTTTTATCATCTTTTAGGTTGTTACTGTCCAC TCCCACTATAAATCTCCACCATTTCCCTGATTAGGGTTTTTATTCATTCTCAGCCGTCGCCGTCGCCGTCGCCGTTCCAGCTCCAGAGAGAGAGTCAGAGAGTTGCATTAGGAAAAGATGAAGACGATCCTCTCATCGGAAACTATGGACATCCCCGAGGGGGTGAAGATCAAAGTGAACGCCAAAATCATCGAGGTCGAAGGCCCTCGGGGGAAACTCACTCGCAACTTCAAGCATCTGAATCTTGATTTCCAGTTGATCACCGAAGAGGGTACCGGAAAGAAGAAGCTCAAGATCGATGCCTGGTTCGGCTCCAGGAAGACTTCTGCTGCCATTCGTACTGCCCTTAGCCATGTTGAGAATCTCATCACTGGTGTCACCAAGGGCTACCGTTACAAGATGCGATTTGTTTATGCTCACTTTCCTATCAATGCTAGCATCACCAACGGCAACAAGGCTATCGAGATCCGTAACTTTCTTGGTGAGAAAAAGGTGCGAAAGGTAGATATGCTTGATGGAGTATCTATTCTTCGATCTGAGAAGGTCAAAGATGAGTTAGTCTTGGATGGTAATGATATTGAGCTCGTATCTCGGTCTGCTGCCTTGATAAACCAGAAATGCCATGTCAAGAACAAAGATATCAGGAAGTTCCTTGATGGTATTTATGTCAGCGAAAAGGGAACTGTTCTTGACGAGGAGTGAAGATCATGAGTAGTTTTGTTCAACCATGCTTTGGCTTTGGGTGATTGTTTCTTCTTATATATTTATATTTCATTCGTAGACAAATTCGTGAAAGCTGGGTTTTGAAAGGAAAAAAAAACTTATCGTAGACAAATTCTCGAGCTTTTTGGACACTTGTAATGGCTGATGGATGGAGTAAATGCCAGTTTTCATTGTTTGGTTTGTTTTGAGAGTTTCTATTTCCAAAAGACTTAATTTTGTTCCTATCTGTAGGGTTGAGAATGTTGTCCATTTTTCAATTTATAGTTAAATTAGTAGTATGGTGAAGCAATTGTTGATTGTGGATGCAGTTCTTGTTCCTCTGGGCCCTAAAATTTTGCTCTTATAATATTAACATCAACTTACATCGATGGTAAGCTATGATTGAAGACTGCAGAACTGCCCTCATAACTTTTGGTTTTTATCAAGTTCTCTTTTTATCATCTTTTAGGTTGTTACTGTCCAC ATGAAGACGATCCTCTCATCGGAAACTATGGACATCCCCGAGGGGGTGAAGATCAAAGTGAACGCCAAAATCATCGAGGTCGAAGGCCCTCGGGGGAAACTCACTCGCAACTTCAAGCATCTGAATCTTGATTTCCAGTTGATCACCGAAGAGGGTACCGGAAAGAAGAAGCTCAAGATCGATGCCTGGTTCGGCTCCAGGAAGACTTCTGCTGCCATTCGTACTGCCCTTAGCCATGTTGAGAATCTCATCACTGGTGTCACCAAGGGCTACCGTTACAAGATGCGATTTGTTTATGCTCACTTTCCTATCAATGCTAGCATCACCAACGGCAACAAGGCTATCGAGATCCGTAACTTTCTTGGTGAGAAAAAGGTGCGAAAGGTAGATATGCTTGATGGAGTATCTATTCTTCGATCTGAGAAGGTCAAAGATGAGTTAGTCTTGGATGGTAATGATATTGAGCTCGTATCTCGGTCTGCTGCCTTGATAAACCAGAAATGCCATGTCAAGAACAAAGATATCAGGAAGTTCCTTGATGGTATTTATGTCAGCGAAAAGGGAACTGTTCTTGACGAGGAGTGA MKTILSSETMDIPEGVKIKVNAKIIEVEGPRGKLTRNFKHLNLDFQLITEEGTGKKKLKIDAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNGNKAIEIRNFLGEKKVRKVDMLDGVSILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTVLDEE Homology
BLAST of Tan0001538 vs. ExPASy Swiss-Prot
Match: P30707 (60S ribosomal protein L9 OS=Pisum sativum OX=3888 GN=RPL9 PE=2 SV=1) HSP 1 Score: 337.4 bits (864), Expect = 1.1e-91 Identity = 172/194 (88.66%), Postives = 183/194 (94.33%), Query Frame = 0
BLAST of Tan0001538 vs. ExPASy Swiss-Prot
Match: Q9SZX9 (60S ribosomal protein L9-2 OS=Arabidopsis thaliana OX=3702 GN=RPL9D PE=2 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 4.1e-88 Identity = 160/194 (82.47%), Postives = 180/194 (92.78%), Query Frame = 0
BLAST of Tan0001538 vs. ExPASy Swiss-Prot
Match: P49209 (60S ribosomal protein L9-1 OS=Arabidopsis thaliana OX=3702 GN=RPL9B PE=1 SV=3) HSP 1 Score: 324.3 bits (830), Expect = 9.2e-88 Identity = 160/194 (82.47%), Postives = 180/194 (92.78%), Query Frame = 0
BLAST of Tan0001538 vs. ExPASy Swiss-Prot
Match: P49210 (60S ribosomal protein L9 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL9 PE=2 SV=3) HSP 1 Score: 323.9 bits (829), Expect = 1.2e-87 Identity = 160/193 (82.90%), Postives = 180/193 (93.26%), Query Frame = 0
BLAST of Tan0001538 vs. ExPASy Swiss-Prot
Match: Q90YW0 (60S ribosomal protein L9 OS=Ictalurus punctatus OX=7998 GN=rpl9 PE=2 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 6.9e-59 Identity = 115/194 (59.28%), Postives = 144/194 (74.23%), Query Frame = 0
BLAST of Tan0001538 vs. NCBI nr
Match: XP_022996012.1 (60S ribosomal protein L9-like [Cucurbita maxima]) HSP 1 Score: 370.2 bits (949), Expect = 1.1e-98 Identity = 188/194 (96.91%), Postives = 192/194 (98.97%), Query Frame = 0
BLAST of Tan0001538 vs. NCBI nr
Match: XP_022159699.1 (60S ribosomal protein L9-like [Momordica charantia]) HSP 1 Score: 370.2 bits (949), Expect = 1.1e-98 Identity = 187/194 (96.39%), Postives = 192/194 (98.97%), Query Frame = 0
BLAST of Tan0001538 vs. NCBI nr
Match: XP_022958609.1 (60S ribosomal protein L9-like [Cucurbita moschata] >XP_023532091.1 60S ribosomal protein L9-like [Cucurbita pepo subsp. pepo] >KAG6605746.1 60S ribosomal protein L9, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035650.1 60S ribosomal protein L9 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 368.6 bits (945), Expect = 3.3e-98 Identity = 187/194 (96.39%), Postives = 191/194 (98.45%), Query Frame = 0
BLAST of Tan0001538 vs. NCBI nr
Match: XP_023551562.1 (60S ribosomal protein L9-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 367.9 bits (943), Expect = 5.6e-98 Identity = 187/194 (96.39%), Postives = 191/194 (98.45%), Query Frame = 0
BLAST of Tan0001538 vs. NCBI nr
Match: XP_004145906.1 (60S ribosomal protein L9 [Cucumis sativus] >KGN49915.1 hypothetical protein Csa_000354 [Cucumis sativus]) HSP 1 Score: 367.1 bits (941), Expect = 9.5e-98 Identity = 185/194 (95.36%), Postives = 191/194 (98.45%), Query Frame = 0
BLAST of Tan0001538 vs. ExPASy TrEMBL
Match: A0A6J1K0L1 (60S ribosomal protein L9-like OS=Cucurbita maxima OX=3661 GN=LOC111491349 PE=3 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 5.4e-99 Identity = 188/194 (96.91%), Postives = 192/194 (98.97%), Query Frame = 0
BLAST of Tan0001538 vs. ExPASy TrEMBL
Match: A0A6J1E338 (60S ribosomal protein L9-like OS=Momordica charantia OX=3673 GN=LOC111026041 PE=3 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 5.4e-99 Identity = 187/194 (96.39%), Postives = 192/194 (98.97%), Query Frame = 0
BLAST of Tan0001538 vs. ExPASy TrEMBL
Match: A0A6J1H5L1 (60S ribosomal protein L9-like OS=Cucurbita moschata OX=3662 GN=LOC111459785 PE=3 SV=1) HSP 1 Score: 368.6 bits (945), Expect = 1.6e-98 Identity = 187/194 (96.39%), Postives = 191/194 (98.45%), Query Frame = 0
BLAST of Tan0001538 vs. ExPASy TrEMBL
Match: A0A5D3C437 (60S ribosomal protein L9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00890 PE=3 SV=1) HSP 1 Score: 367.1 bits (941), Expect = 4.6e-98 Identity = 185/194 (95.36%), Postives = 191/194 (98.45%), Query Frame = 0
BLAST of Tan0001538 vs. ExPASy TrEMBL
Match: E5GBD5 (60S ribosomal protein l9 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 367.1 bits (941), Expect = 4.6e-98 Identity = 185/194 (95.36%), Postives = 191/194 (98.45%), Query Frame = 0
BLAST of Tan0001538 vs. TAIR 10
Match: AT4G10450.1 (Ribosomal protein L6 family ) HSP 1 Score: 325.5 bits (833), Expect = 2.9e-89 Identity = 160/194 (82.47%), Postives = 180/194 (92.78%), Query Frame = 0
BLAST of Tan0001538 vs. TAIR 10
Match: AT1G33120.1 (Ribosomal protein L6 family ) HSP 1 Score: 324.3 bits (830), Expect = 6.6e-89 Identity = 160/194 (82.47%), Postives = 180/194 (92.78%), Query Frame = 0
BLAST of Tan0001538 vs. TAIR 10
Match: AT1G33140.1 (Ribosomal protein L6 family ) HSP 1 Score: 324.3 bits (830), Expect = 6.6e-89 Identity = 160/194 (82.47%), Postives = 180/194 (92.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|