Tan0001503 (gene) Snake gourd v1

Overview


Name	Tan0001503
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RNA-binding protein 39
Location	LG02: 6127847 .. 6143137 (+)
RNA-Seq Expression	Tan0001503
Synteny	Tan0001503

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACATTTGACTACTCCCAGCAAAAAGCCAGTTCTTGGGCTGATGGGCTTTCAGTTCAGCGCACAATCAGACGCTCGACAGTAAATCAGAAGTTAAGCCAAATTCCGTATCACAGCGTACCATCGAAACCAATTGCGAACGAGCGGGCGGGCGGGAGCACCAGCACAGCACCAATCCAGTTATCCTCGTGCTGCCGGCTGGAGGCTGGAGCTGGTGAGCAGAGCTCAAAAATTTTCTCGCTGTGGAGGTAATTCAACGTTTCTACTTTCTATGAAACAATTGCTTTCATTAGCGTCCGAGAATGGTGGCGAAGTGGAATGTAAATGTAATGTTTGGCATTGAGAACTGAAGGAGTCTTCTTCTTCATTCGTAATTAGGGCTTCGTTCTTCGCGTAGCTTTAATTTTTGAATTGCTGTATCGTTTCATGTCTTTGGCCGTCGGGACAGTACTTACGCGAGTTTGCGATTAGGATTCGCAAGTTGAGTGAAGTTCTTGTTTAGCTGGAAGCAATTGTGTTATGGAGTCGGTATATGGTTGTTAAGTTCTTGAGAACTGAGATATTTGTTGCTTTATAGATTTCTCGCTTACAAGTTTTTCTTTTCTCTTCCTCGCAGGTTTTCGCAGTTCTGAAGACGCAGTTTAACTGCCGTATGTTGTATTGCTTGCTTTGGAGAGAGTAGTTATGGATTTTGATGAGTATGATTATTTGGAGAAAACAGTTGAAAATCCTGAGGGGCAGAAACTGAAGGAAACTGCCAATGGCGGCGATGCAGAAATTAAGTCTGGAGATAAACATCGTAGTCGAAGTTCAAAGTATAAGAATGATGGTAAAGACGATGGGGAACATAGGTCGAAGCGTTCAAAATCAGAAGATGGGTCACGGGATCATGATCGACATAGAGATAGGACTTCTTCCCGGCACCGGTCTAGGTCTAGAGATAGAGACCGTGATCGGCACCGAAGCAGTAAGGAATATAGGGGAAAAGAGGACAGAGAAAGGAATCGGGAAGAGAGGAGCAGTAAGGACAGAGATGCGGACAGAGATAAAGAACGTGTTCATGATCGTGATAGACGAGGTAGAGATGGTGAAAGGGATAAGGAAAGAGAACGGTCACGTCGAAGTAGAAGTCGTTCGGAAAGACATCGCAGTGATAGAGATGAAAGCATAAGAGAGAGGAGGCAAGATAATGAATTCAGAGAAAGGGAAAAGGAGAGAGAGTCGAGAGAGCGAGGAAGAGATGGCAGGTATTTTGTGCATTTATATTCTTGTATCACGTTTTTTGGTATTTAGAAGGAGAGACAACCAAGAGAGTTATTTGCGTTCTTCCGATAATAACCTGCATAAAACTTGTAATTCTCATTCAGACTCTAATGACGAAACTCTTTCATTGAGTAATTTAATTTGCATATTATGTTGGTGGATTATTCTTTATGATTTGGATTAGATATGACTCATGAGCATTCTAAATGATAGTCGATGATGTTCATTCACCATTAAAAAAATAAACTCCTGTTTGATGTTGTATGATCATGAAATGATCAGTATGTACTAGTCATATTACAGTCTAGTTGCTTCCAGGAATAAACTTATTGGACTTTGGACTTGGCTTCTTGTAAGGCACCTGTAAGTCTTTGTCCAATGGTCCAATCTCTTTTTCTTGTTCTCCGCACATCATCCATTGTGTATATAGATTTTCATGAGATCCAAGACCACAAACCATATAAATGATGACCTCGTTTTGAAAGGTGAATGAGGAGGTTAAAATATGGCCAATGGGAAACCTCGTCACTTGGTGTTCTTGATGTTTTTTGAGAAAACCCGTGTATCTTCAATTGCAGCCCATCATGATATATGGTGTTTTAAGGACATACTTGTCCCTTCTTTCATACTAGTGTATTTTGATTGTTGTCATTCTTTTCTAAAGTGAACTTCCATTGGGTTTGGTATGAAGTGTGGAAGCACACGCCATTCATAAGGGTTTACCCATTTCTTTCCCAATTAAGGTTGGTAAAAAATTGTTGATTAATGGAAATTCACCCTCGTAGTATCCTAGTGTCTACAGTTTTCTGGTTTTCCAGAATTTCTCATACAATCGTAGTAATTAGGAAACCTCAGATGTGCAAGACTGTCTTGGCTGTCATTTTAGCAATTTTTATGGCAGAGACATTCAATCCCTTTCTAGTGTTCCTACAAATCAACTATTAAGTTTGCTTTGGACCGTTGTGTGTTTCAGTAATGGAGGTCATAAATAGTGGTGGTGACATGACATTTTTTTTCACCATCACCACATTGAAATCCAATATTTAATTTTTATTTATTCTGTTGCAGAATGCTGGTGAGGGAGTTGTGGGCTTTTCTTAAGAGATGAATTCCATCTTCTGATGCTTGTGGGAAATTCAATGTTCAGTTGCTACTGGATTCTTATCATACATGAAATTATTATTTTTTGCTGATTGTCTGTCTATATTTTAAAGGGGTTTTGATTCACTGTTAATGATCTCTTATATTTAGTTGTAGAAATAATTGTTTTGCAGAATTTATAGTAATTGAACTTTTTTTTTGGCACCCATTGATTGTAATCTTGTTCTCTCTATCTATTTTCAGATATTCTCAACATTCCTTTTTTAAACATATTTTTTAATTATTACATTTTTTTCAAAGGTGTATTTCAAAAAATCTTGCAGATCCTTGACTATTAGTTTTGAGAATAAGTTGATCTGTATCACCAATATCACTTATTGAGGTTGAATATTCACTGCTTCCCATGTATACTCCAGTTGATGCTTTACATGTCATACAAATATAAGAGTGTGATAATTATTTCTTTCACCTTTTGTGTAGTTAATTCTTTCTCTGGAGTATAAACTTTTAACGTGTTCTGTGTTAATGCAATTAGGTTCTTTGGTACTGCATCAATTCAACTTGATGACGCTGTTGTCATTTAAGATTTTGTTATTTATGGAAGGTACAAAATCTGTGGTCAATCCATTCCACTGTGTGACTATTTTAGTCTGATTCTTAACTTTCCCATTAAGTACCAGTGTATGTCACATCGTTCTTTGTCAAATGTGTGGAAATGGATTTTTCACATCTCTCTGTTGATTCTAACCTTATTAAAATGTCTACGGGACTTTGTAATTCTTTATAAGCTTTTCATAAAAAATGGAAAGATATGTGTTCTGGATTATTCTTCTACTGTTGCCAGAATCAAAGGTGTAATCAACTCGTTGTAATTTTTTTTCCCATTTCAATGCGTGTTTTTTTCCCACCCTTTTAAATGGAGTTGTTTATAGTTTACTGATGGGTGGTCTCTCATGACTTAGTTGTGCATCCGAAGGGTGTGGTTATAATTTGGCCAGCTAATAATAAAGGATGTCTCTGACCAATGTTTTTTCCCTCCCCACAGAAGATATAAAGAGAAAAAAGAAGAAGCCGCAGAACCAGAAGCTGATCCTGAAAGGGACCAGAGGACTGTTTTTGCCTATCAGGTAAACCTTCTACTGAGATGGGAGATACTCTAGGCTTTTTTATTATCTTCCCCCCTCGTTGCATACTTTTAATTATGTTAACTGATATTTTGTGTGATTTCTTGGCCAGATAAGTTTAAAGGCAACTGAAAGAGACGTGTATGAATTCTTCTCCAGGGCTGGTAAGGTTTGTATGCTCATCATATCATCTCTACCACGTTTTCAGCTCTAAACTTCTCTTATGGTAGAATGCTCGTAATTGATCAAACCAAGGTGCTTTATTTGACTCCTACTCTATGGGAGGTTTTAGCCGCATCTTTTATTTTGAAGCCCCTCCATCTACTGTATTGCATGGTAAAACACAAAACTCATCTAAATTATCCATAGAAATTATACAGCATTAATAGTCTTTGTGCTAGGTAACGTCTCACGTCTCATGTATGATATAAGAAATTGGGTGTATATGATAAATATGCTTCTAAGGAATAATTACAAAAAGCTTTTGTGGGCTTGGTTTTTTCGAATACTATTGTATTCTTTCATTTTTTTTTAGGGGGATATTTTTCTCAATGAAAGTTTGGTTCTTTAAAAAAAAAAATGATAAACATGCTTCTATATTTAGAATCTTTTATACCAACATGAGCATAGCTCAATTGGTATCAAGTAAGACTTATGATTAAGAGGTCATAAGTTCGAATCTCCCACCCCCAAATGTTGTTCTACTCAAAAAAAAAAATATTTAGAATCTTTTATGATGGGATGGGGTGGGGGAGGCTATATGACATTGACCATTCATCCTTTGTACTTACTATTATTTTTATTTTTGAGGCCTTTCCAACATTTGTGATAGGTTTGAGAAAATCATGAGACTTCCTACAGGGAAGATGGGGTTCTCAACTCGATAAGTAGGGATCTGTCTCTGCAGTTACTGAGACCATCGGGTTTGGGTTTCGGGAATTCGGGATCCACTGTAGCAGCTTTCCTTAGAGCTTGATTCTTTGTGGCATAAGATTAATGTGAGTAAATATAGACAATACACTAATGGGTAGGATTTAGGGTTGGTGGGTATTGACACTTATAGGAACTTGTGGAAGGCTATTCAGTCATGTTTGTCTTATTTTCTTGTACATTACTTTTGGTTGGTGAAGGATCTTTCCATTTGGTAATATGTGTTAGGCTGATAGCAACTTTTCGACAAATGTTTCGCGGTCTTTTGGTTGGCTCAAGTTAGGCCATTGTTGTTTCCCTCCCTCTCTCTAAGAAAATATATTCTCAATTTCTTCTTAATGAAAGCTGAATTTTAGAAACTGCTTTCAATTGGTCGATTTCTTCCCTATTGAACCCTGTAGGGTGGCTCGCCCATACTTATTGGTCACACCCTTCCACAGCTGAGAAAAGGATAATTTTGTTTCACATAATCAGAGCCTACTTTGGGGTTATTTGGATTGAACGCAATGCTAGAATTTTCCAAGACAAAGAAAGACCTATAGAAGATATGACTGAACTTATTCTATTTTTAGCTTTTTATTGGCGTAAACATGTTTCTCAATTTTTTTGTATGGATGACCTAAATTTTCAGGCCCAAATGAAATATGATCCACTTTCTAAAATTAAGGACGAATAACCTTTTGCTTACGTCAAAACGATAACGAGAAGACGAGAAAACCTGACGAGAGTGAGAGGGATGAAAGTGTGAGGACGAGAAGAGCAACAATCAACCCATGCCCCCACCCCATCACCATCTTCAACCTTCTTCTTCCCCTTCTCATGCACGCCGACGCTAGCCCACCTCACCATCTCCATCTTCGTTTATTTCCTCCTTCAACAAGCGAACGCAAACAGTGAGGATTCAAGTCATCACTCCCTCCACCATCTTCAATTTCTTCTTCTCCTTCTCACACACTCTAACTCTCCTCCACTGATGCTCTGAAAATGGTATTGTCCACCATAGGCTTCACCGCCGCCTTCGACCAATGAATCATCATTGCATGCAACCCCAAGAACATCAATCAACACCAAACTTCTCTGCAACCTTTAGCTCGAGGCGTCGATTGCAATCGCCATTCTCTCTGTAAATCACCAATTAACCAAAAACCTTAAGCTGATAGGTTATGACAAATTTAATTATATCAACACCAACAATCCCCCTCACTTGTGGGCTAAGAAATTTGAACAAAGGCCCAATAAGTGGAAATCAAACACTCCCCTAACTTGTGGGCTTGAAAATTTGAACAAAAGCCCAACAAGTACAAATCAATATTAATGGGGAGAAAACGACTTCACCAGGATTCAAACATAGGACCTCCTGCTTTGATACCATGTAAATCACCAATTAACCCAAAAGCTTAAGTTGATAGGTTATGACAAATTTAATTATATTAACACCAACACTCTCGTCGGTTCCCAAAGCCATATTGACCTGTAACGCACACAGAACGAGCCAAGCGACGCTCAGGTCGAACGATTTCGCCATAAGAATCGATTTACTGTGCAATATCAAGAACCTCTTGCTCTTGTCGGGTTTTTCGTCCTCTCGCTCTTGTTGAGACGTAAGCAAAAGGTTATCAATCCTTAATTTTAGAAAGTCGGGCATATTTCATTTGAGTCCAAAATTTTGGATGGATATACAAAAAACCCATGTTTCTCCCTTTTGCAACTATAGTCTCAACACTGTAGTACCTAATTGTAGAACCTTTTTGTTACTTCATTGGATGAGATTTTTTTCCCCCTTTTTTGTAAAGTTTCAGTCTATCAATGCAGTTTCCTGTCCAAAAAAAGTTGAGTTTCTTATACGTTTTATTTATAGGAAAACTCTCTTATCTCTCTGCTTTAAATTTATTTCTAAGTTCCTCTGAATGAAATTTGAGTTTCTTATATCTATAGAAAGAAAAAGTGATCAGCTTGGCCAATTTCTCTCTTCTTCTTATTTTTTTTTAAAAAATTAATTTTAATTTCTTCTCAATGTAAGTTGAGTTTCTTATACCCAATTTTCTTTTTCGTTTGTTGTTGGTAATTTCCTTCATTATAAATCTCCCTAATTGATGGAACGCAACTTACAGGTGCGAGATGTACGTCTCATAATGGATCGTAATTCAAGACGTTCTAAAGGCGTTGGGTAAGATTAATGTGCTTGATGATGTTCACTTGAGTTGGTTGGAGTCTGAACACTTTTGATTCACGTTGTCTCATATTTCATTATTCTGATTATTGTCTTAAATCAAATGTCATTAATTTTTCAAAGTTCAACAACTGGAGCAATAATGTTCAAGACAAAATGTGATAAAACATTGAGTATGTTCTGGAACAAGAAGTTGAGTTTGAGGGGCTTTGCTTTGCTTTTGCTTCTTTTATTTTATTTTTGTTTTTAGAGACTGTATTATAGACAAAAAGAAGGGGGAACAAAACAACTTGGAGGCTGGGGGTGGAGAAAACCCTTGCCTAGAACTACAAAAGAAGAGCCTTCCAAAGGTCAATGGTTTGATCCCCCACCTCCACAATTGTTGAACTCAAAAAAAAAATAAAAACAGAAAAAGGGCCTTCCAATAATGATCATAAAAAGTCTATAATTACAAAAGGACTTGTGGTTTGAGCACCTCCAAGAAGTAATGTGTTGAACCCTTACAAAAAGAATTCACTGAGACCATCTTATCTACTAAAATCCTTTGGTTTCTTTCCTTTCATGTCAGACGAAGGAGAGTACACACTGCCCAATTCCCCAAAACCTTTGTTTTGCCTTTTAACATGGAGTCTCCAAATGATTCCTGAAACAACTAATTCACCTTTAGAAGAACGCGAAAGTCCATGCTAAATTCAGACAAAATGCAGGATTAGGTGCAATAGTCGAAGAGCCAAGGATAAAAAGATGATCCAGGGTCTCTTCATTCATGCTGTATAAACAACAGATCAGAGGAGATACGATCTATTGGGGAAAGTTTCTCATGAGCATCTCAGCCATTTGACGACTTCTGTAGAAAAGAGACCATAAGAAGAACTTCAGTTCCTTAGGAGCCTTAAAATTCCAAATATAGTTCACCAGAGGGGCTTTCAGCTTAGCTTTGGACTTAGTAAGGTTGGTAAAGGCAGACTTAGCTAAGTAAGAACTGCTTGCATCTTTTTGTTTCCCAAACCTATAGGAGTTCTGCACTTTTTAGCTTTTCTTTGTATTGATGAAAATTTTGTTTCCTTTCCAAAATAGAAAGACACTGATTTTAGGAAGGATCCTAAATGGTTTATGATGGCAAAGGCATTGGATAGGATGGTCCTATTCATAATGAAAACTCGAAAAAAGAAAAACAGCAAGGTTCTTGCGTGAGGAAGAGAAACGTTAGGGTTTGGGGGACAAGGAACTGAATTTCGTAGGTAAATTACAAGGAAGGCATCAGTATTTGGATAAGGAGGGCTCCTATAGTTTTCTATGAAGACAATGAGGTGACATGTTTAGGACTTAAGAGCTCGAGGAAAAAGGGGATTAGTAACTGGAAAAAAAAAGATATTATAGAAAAGGAATCCAATTGTGTTGATTCTCCAAGGGAATTTCACTTGTATGTATAGATAGTTTATTCTTTCTTTCCCTTGGATTTAATATTGTCCCTATATGTGCAGGTATGTTGAATTTGTGGATGCAATGTCTGTGCCCATGGCTATAGCACTTTCAGGCCAGCTCCTGCTTAGTCAACCTGTGATGGTAAAGCCATCTGAAGCTGAGAAGAACCAGGTTCAGTCAACTTCTGCTGTCGGTGGAGCAGGTGGAGTAATGGGCCCTTACTCTGGTGGTGCCAGAAGGTTATATGTTGGCAATCTGCATCCCAACATAACAGAAGATAACCTTCGTCAGGTTTGTAGATGAATGTCATGGGACATAATACATATGTTACACAGTACTAATAATTCTTAGTGGCATATGTTTCTAGAATCAACTCAACTCTATTAAGTGCAAAATACCATGTTCTGTGAAATCTTTCAGACTTACTTTTCGTCTGTCTATTGCTAAAAAATTGTCCTTGTAATATTAGTGCTTTGCTTGGATAAAATGATTGCCTTTCCTCTACTTCCAGGTTTTTGGAGCTTTTGGCACTGTGGAACTGGTTCAGATGCCTGTTGATGAAAGTGGGCATTGCAAGGGTTTTGGTTTTGTTCAGGTAAATATATATCTAGAAAATATTTTATTCTTTGAGAAATGCCGCAGGAATGTTAGGGCATAGGCTAATCAAATCTGTTTGACTGCAGTTCACACGTCTTGAAGATGCTAGAAATGCACTTAGTTTGAATGGACAACTGGAAATTGCTGGTCGAACGATAAAGGTGATGTATATTCATTATGTTTTCACATGCATGTAATCTTACATGCAATTTTTTTGCTAGCATGCTTTATATATATATGTATGTGTGTGTATATATTTTTGTGGGGTTGAATTTGAATAGCAGTCAAAACTCAAAAATGCTAATTCCCCTATACTATACTGCATTAGTTGTGAGAATCTACTTCTCATTTGTAAGAATTGGGGTTTCTTAAATTGAGTGAATTTCAATGTCAAAAGATAAGACTTTAAAAATTTTATTTTTAATCTTTTTATGGCAAGAGCTTTGAGCGTTAACTATTGTCACTCTTTGATGCTTTTTACATGCTTCTTCAGAATTATGGGCCTTTCATCTGTCAATTCGATTGTGGCATCTCATGACTGATAGACTAGGGGGAGGTTCTAGAGGTCCTGATCACCTAAGTTTCAAGGAATTTTTAAATTACACTTTTTTTAGCTCAAGAATTGCAAGGTGAGGGATCAAACCATCAACCTTTGGAATGGTAATTGGTATCTTATCCACTAAGCTATGCTTGGAAGTTGGATTGACACTTGAGTTTCAAGGATTGCAAGATGCATGAGCCTGATGGCTTTCTTTAAGGAATGATGTGAGATATCATTAAGTTAGATCGCTCAAGGTGTTTAATGGTTCTTAGAAAGGGGTATAATTTTATGCTTCGATGTGTTCAGTGTACTATCCAAAAAGATAAATTGATGCAGAATCAGGGACCTTAGATCATAAGTTCAATGACTTGCTTGTATAAAATCAATTTCAAGAGTATCGCAGGCAGGGTGAGGAAGGTGTTGCCACAGACTATTTCTTATAACTATCAGAGTTTGTAGTTGGCAGACAGACTATTGATGAACTTCTTACTGCTATTGAGGACTATATAACTTATAGACGAAAAGGTGCTAAATTTAAAACTGAATTTGGAAAGGCATTCATATCATATGATCATATGATTGGGATTTTTTGAATTAGGTTATGTGGATGGCTTTGGATTAAATAAAGACGTGAGATGCTTTGGGTTGGGTATCTAGGTTAATATTTCCACCCTAGCCAAATGGTTGTCTCACTTCTCATTAGAGGGACCTAAAAGTTTGAATCGAAATCCCGTTGAAATCTTAGGGCCTGTTTGGTACGTAATCTGAAAACAGAAATTTGAAAACAAGGGATTCAATGAAAACAAAGTTGTATTTCATGTTTTCGGATATGTGTTTTAGTAGTGATTTAGAAATTTGATTTCATTCTAAGCAGTTGTTTAAAGCTGTGCCTCTATAACATATTTATAGATCATGAAATTAGTTGTAGATGCAAAACTAATTATTATATTGAATATAAGTCATTATTAATTAATTTAGGAAATGATTTTGCAAATTTTATAGAATTATCTTTTTATAATATAATATTCTATAATTTATAATATATTATATTCTACATATTTTAATTTAACAAAAGTAAATTGAATTCATAACATGAAATATTGTATTTATTATTTTTATCTTTGTTTAATATAATTCTGCATTTTAAAATTTTAAATTCAGAATCTGGATACAATGAAAACATAAAAATGTTGTTTTTAATTTCTACTATTTGGATCGAGAATCCAAAGCAGTTTTAGAAAACACATCGCTAAACACATATTCACTGAATTCAGTGAATCCGAAAACATAAAACAGGATCTGGATTGCATACCAAACAGGCCCTTAGGTACTTCTTTTAATTAAGGGGGTTTCATGAGTTTGATGTACCTTATTTTGTTCCTTTTTTTATTTTTTTTTTATTATTAGATTTGGATTATTTATCAATAAGACACTAAGTCAAGGTAAGAATTAGAGAGCTTCCCCTCTCTCCCAAATGCTAATCCACCTTCAGACTAAACCAAAAACGTACCCCCTCACAGCTCTCTCTAAATATTTCTCTCCAGTGGGCCCCCTTCTAACTAACTATTTACAGCATATTGTTCCCCATTCATCTTCCTCACTTGGCGATACATCCCCCTCTCTCTCTCTCTCTCTCTCTCTTCTGTTTAGCCTGCCTCCCCTTTTTTTGCCGAATAAGATTTAATTTTTCTCTTGATTGTTGTGTTTGAGAGGATTCATACCGTTAATTTGATTGAGAGGTCTTCTTCTCATTTGGCTTCATTGATTTGTTTTTGTTAAACAGAGCCTGCGAGGATTGGATATTACATCTTCTCGATATGGCCTTTTGTTGAGAAAACCTTGTTTAAGTTTTTCTAGGTTTGCTGGGCACTATTAGCTTTGGGTCAACCTCCTTTTCAAAATTGAGGTGGCCTTTGTGATCGTACGGAATATTTGGTCAGAAAGTAGTAACAGCATTTTGAGGGATTCTGGGTGGAGATTTGAAGTTTAGCTCACCTCATTGCCTCTTCTATATTTGTTCTTGCTTCTTGATTACAAAGAAGAGCTCCTTGTAGTCTTTCCCCCTTTTGTGGTGGTTTTGTTTGTCTTCAGCCTGTATTTTTATATGGTTGGGTTCTCTTTGCATTTCATTCTTTTTAATGCAAGAATATTTTTAATTAAAAAATGTGTAATACTTGGCGATGAGTTTAGAAAGCGGATTGTACTTAACAATTAACAAATATTACAAGAAATAATTTTCTTGTTGTCGGCTTTAGATCTGATTATTAGATAAGCTGATAGCACATGGAGAGCAACCTTTAGTATTCTAATACGAGAAATAATATTGTTGAAAGGGGAGTGGGAATTCTTAAATCACCCATCAACCCAAAAGGTTAAGCTGATGGTTTAGGGTAAATTTAATTATATCATACTAGTCTAACATTCCCCCTCACTTGTTGTGGGCTTGGAAATTTGAAGAAAAGCCAAACAAGTGGAATCAATATTACATAGGGAGAAAACGACTTTACAGAGATTTGAATATACCTCATGGACCACCTGATCTGATACCATCTTAAATCACCAATTAACCCAAAAACTTAAGTTGATGGTTTGGGGTAAATTTAATTATATCATACTAGTCTAACAAGAATTAACAAACAGATAGACGACTGGAAAGCTAGTAAGAATGTGGCAAGGTTCCCACTGAATGCTCTTTTCACTTAACTGTAGCAAGGTGATATGGCTAATCAAGTACAATCGATTTTCTGTCTGGAATAATATCATGATTTCTTATTATCTCCTTATACAGGTGTCCACAGTCACAGATCAGCCTGGACTGCAAGATATTGGAGCAACTACTGGAGACCTTGATGATGAAGATGGAGGTGGCTTGGTAACTAAGTCTTCTATCTCTGTTCCTCCCTGCTTCCCTAAAAATGAAGCTAAGTAATACTACATCATTAATATAAAAAAAATCACCAAGAAATTGAGAGAGACGGATTTATGTCAAGTTATAAGAGTACCTGAGGTATTGCTCCTTTTATTGTTTAGAAGAATACACTCGTATTTATTTCTTTATTGTTTGTTCTTGCTGCATTGGTAATGCTCAATATACCCGGTTTCTTTGACATGAACCATTTGCAAGCTTCCCAGCTCTTTGTTTCTCCGTTTACTTTATTTTTTCATATCATTTTATCTTAGTCCGTTGTTACTGGAATTTGGTCCTTTGTGATATTTGGGATGTCACCATAAGAAAATCATAATTGGTCTTCTCCCTTGATATTAACACAAAATTCTTACTAAAATGACGTATAGAAAATTATTTTAAAAATTTCGCAATTAGAGTATATGAAGGTTTAAGTAATATCAAAATCTAAAAGCTTAACACTCTCAGACCAACAAAAAATAGCACTCCTTCCCTGTGATTTCTTTGTATACGGAAAAAGTTTGCTGCTCTCACTGCACCCACGTTTTTAGTTATATTCATTGGCTGTGGTGTTATATATTTTTACTTTCTTTTTGGAAAGTATATATATTTTCTACTGGATGTAAAAGCTTTAAACATACGAGGTAACATGTGCTAGTAACTAACGTTTTATCATGGATGTTATCTATCCTGTTTTATACTCCCCCTAAAGCTTTTGTAAGTTTCTGGCTGAGACTTCAGCTGAAGAGTTTTTTTGTCTTTGCTTTAGCCGCTACATTAACCAAGATGTTTCAATTTTTCAGTCCTTAAACGCAAGTTCTCGAGCATCTCTGATGCAGAAGCTGGACCGTACTGGCACCGCTTCTAGGTTTGTCTTTGTGGACCTTGTCACCATTTGAAAATTTGAATGTTGGTCTTATATCTGTTTTCTCTGCAGCATTGCTGGTTCTTTAGGTACACATGTCGTTAATAACACAGGCGCTGCTTTGCCAATAGCGCCGATTCTTGGAGCTGCAACTATTCCTTCCCTTGCTACTTCTTTGGCCACCGTCCCTACTTTTCCTGGACTCGGTGCAGGCATTCAGCTTCCCACTGCTACTGCCAATTTACTTGGTGTTGGTTCTCCAAGTGAATGCTTACTATTGAAGAATATGTTTGATCCTACAGCTGAGGTACACCGCATCATTCTAAAGGTTTCTTTTAGATTTTCTGTTTATGTTTCAAGTTTAATTGGGTTCTCCTTTATGTTTGGCAGTCGGAACCAAATTTTGACCTGGATATCAGAGACGATGTTGAGGAGGAATGCTCTAGGTTTGGAAAATTGAGACACATATATGTCGACAAGTAAGTTTCGGTCTTTACGTTCCATGGTTTAATTTCTAATTCCTCCCCCTTTTCCACCAATGTAGTTTGGTTATTTTCTTCTTCATGGACAGGAATAGCGCGGGTTTTGTATATTTAAGATTTGAAAATTCACAGTCTGCAATGGATGCACAACATGCCCTTAATGGAAGATGGTTTGCTGGCAAAATGATCGGTGCAACTTTCATGGTAAATCTTTTTGCCTCGTGTTAGAACTAAGTGCATGTTTGAGAATGATTTTAAAAATATTGATTTTAGTGTAATTGATTTGTCTATAATTGATTTATTAAAAGTGATTTTCATATAATCATTTTCATGTTTGGTTCTATACTTTTAATCTAAGAAGCACGGACACGGACACGACACGGACACGGCGACACGCCAATTTCTAAAAATGTAGGACACGGACACGTTGGGGGACACATTTTTATTTTATTTTTTTAGGTAATATATGTCATATGTGTATATATATTAAATAATATGTGCTTCATTAATCCATAAATGACAATACTAAGAAGTTAAATATCCAACTTATGAATACAACAAAATATTACAATAGAAATGAAAGTACTAAAAAGTTAGAAAGTCATTCTTCCTGGAGGGCTGACTGTGACTGGTTTGGTGCGATTGCATACGAGAAAGAGAGGTGAAACCGTGAAAGTCGTGCTGTTTTTTTAGGGCTGTTTTTTTATTTTCTTTTTAGGGCTGGCTGGCTTTATTTTTAACATAAAGTTGGGCCAAGTTTTTTTAGGGCTGGCAGATTAGTTTTGTGTTGTTTAGGCCTGTTTTTTATTTTTTTTTATGGTTGGCTGGCTGGCTGCTTTTTATTTTTAACATAAAGTTGGGCCAAGTTAGGCCCAATGGTTTTTTTCTCTTTTAAACGTGCAGCGTGTCCCCAACGTGTCCGAAAATTTAAAAAAAAAAAAAAGACACGAAAACTGCGTGTCGGACACGTGTCCGGACGTGTCCGTGTCCGACACCGACACTTAGCCAAATCTGAAGTGTCCGTGCTTCCTAGCTTTTAATAGTGATTTTGGTTTTGAAAAAATTCATTTTTTTTTATGAAAATTTATGAATTTTGACAAAAGATTACGGTTTTTACTCGTCATTAAAAGTATACCATTTTCAAAAAATGAATAATAGTCATTTTAAACAACAATCACTTGACAAAAATCACTTGGAAATCACCCCCCAAGTTATTGAAAGGCAATCACTTCAAATGATTTTGGATTCTTCCAAAATCACTTGCTTAATCTGGGCAAACATCACACTTTGGGTAGGAAAGTGATTTTAGACATGTCAAAAGTGATTTTGGTCACTTTAAAATCACCCCCAAACATGTCCTAATGTTATTAATTCACGGAATTCCTTTGTAATCTCAGGACATCTCGAGCTACGAAGCGAAATTTCCCGACAGCATATAGTACTCCAGATTTATTTAGTTCCAATGCTCTACTCTGAAACAGTTACTGGCCCATTCATCCTCTTTGAGATTATTCTACAGTGGCTCAAAGGTGCCAGGGTCAGAAGATGATTTTGTATGTCACTGAAAGGTATGCTATTAATAATTTACGAGCACGATGGCGCCCTGCAAACAAAGATGGTGAAACAAATAGCATGGCTCAAATATAGAATCCATTGTTCAATATGAATATTGAAAAGTTGAATGTAGTGTAGCTGAGATATGACCCTTTTGTATGTTCTACTAGGAGGAGTTTATATCTAAACATGATTTGACCTAGGAAATTCGGAGCCCCGAATCGTCAACCCACTCGATTTACATTTTAAGACATCTTATGAGATTTCGCAATGTTGTTACACTGTTAATGTTATGGATAATTTATCTTATGCTTAGTCTTCATTGATTTTGGAACA

mRNA sequence

CACATTTGACTACTCCCAGCAAAAAGCCAGTTCTTGGGCTGATGGGCTTTCAGTTCAGCGCACAATCAGACGCTCGACAGTAAATCAGAAGTTAAGCCAAATTCCGTATCACAGCGTACCATCGAAACCAATTGCGAACGAGCGGGCGGGCGGGAGCACCAGCACAGCACCAATCCAGTTATCCTCGTGCTGCCGGCTGGAGGCTGGAGCTGGTGAGCAGAGCTCAAAAATTTTCTCGCTGTGGAGGTTTTCGCAGTTCTGAAGACGCAGTTTAACTGCCGTATGTTGTATTGCTTGCTTTGGAGAGAGTAGTTATGGATTTTGATGAGTATGATTATTTGGAGAAAACAGTTGAAAATCCTGAGGGGCAGAAACTGAAGGAAACTGCCAATGGCGGCGATGCAGAAATTAAGTCTGGAGATAAACATCGTAGTCGAAGTTCAAAGTATAAGAATGATGGTAAAGACGATGGGGAACATAGGTCGAAGCGTTCAAAATCAGAAGATGGGTCACGGGATCATGATCGACATAGAGATAGGACTTCTTCCCGGCACCGGTCTAGGTCTAGAGATAGAGACCGTGATCGGCACCGAAGCAGTAAGGAATATAGGGGAAAAGAGGACAGAGAAAGGAATCGGGAAGAGAGGAGCAGTAAGGACAGAGATGCGGACAGAGATAAAGAACGTGTTCATGATCGTGATAGACGAGGTAGAGATGGTGAAAGGGATAAGGAAAGAGAACGGTCACGTCGAAGTAGAAGTCGTTCGGAAAGACATCGCAGTGATAGAGATGAAAGCATAAGAGAGAGGAGGCAAGATAATGAATTCAGAGAAAGGGAAAAGGAGAGAGAGTCGAGAGAGCGAGGAAGAGATGGCAGAAGATATAAAGAGAAAAAAGAAGAAGCCGCAGAACCAGAAGCTGATCCTGAAAGGGACCAGAGGACTGTTTTTGCCTATCAGATAAGTTTAAAGGCAACTGAAAGAGACGTGTATGAATTCTTCTCCAGGGCTGGTAAGGTGCGAGATGTACGTCTCATAATGGATCGTAATTCAAGACGTTCTAAAGGCGTTGGGTATGTTGAATTTGTGGATGCAATGTCTGTGCCCATGGCTATAGCACTTTCAGGCCAGCTCCTGCTTAGTCAACCTGTGATGGTAAAGCCATCTGAAGCTGAGAAGAACCAGGTTCAGTCAACTTCTGCTGTCGGTGGAGCAGGTGGAGTAATGGGCCCTTACTCTGGTGGTGCCAGAAGGTTATATGTTGGCAATCTGCATCCCAACATAACAGAAGATAACCTTCGTCAGGTTTTTGGAGCTTTTGGCACTGTGGAACTGGTTCAGATGCCTGTTGATGAAAGTGGGCATTGCAAGGGTTTTGGTTTTGTTCAGTTCACACGTCTTGAAGATGCTAGAAATGCACTTAGTTTGAATGGACAACTGGAAATTGCTGGTCGAACGATAAAGGTGTCCACAGTCACAGATCAGCCTGGACTGCAAGATATTGGAGCAACTACTGGAGACCTTGATGATGAAGATGGAGGTGGCTTGTCCTTAAACGCAAGTTCTCGAGCATCTCTGATGCAGAAGCTGGACCGTACTGGCACCGCTTCTAGCATTGCTGGTTCTTTAGGTACACATGTCGTTAATAACACAGGCGCTGCTTTGCCAATAGCGCCGATTCTTGGAGCTGCAACTATTCCTTCCCTTGCTACTTCTTTGGCCACCGTCCCTACTTTTCCTGGACTCGGTGCAGGCATTCAGCTTCCCACTGCTACTGCCAATTTACTTGGTGTTGGTTCTCCAAGTGAATGCTTACTATTGAAGAATATGTTTGATCCTACAGCTGAGTCGGAACCAAATTTTGACCTGGATATCAGAGACGATGTTGAGGAGGAATGCTCTAGGTTTGGAAAATTGAGACACATATATGTCGACAAGAATAGCGCGGGTTTTGTATATTTAAGATTTGAAAATTCACAGTCTGCAATGGATGCACAACATGCCCTTAATGGAAGATGGTTTGCTGGCAAAATGATCGGTGCAACTTTCATGGACATCTCGAGCTACGAAGCGAAATTTCCCGACAGCATATAGTACTCCAGATTTATTTAGTTCCAATGCTCTACTCTGAAACAGTTACTGGCCCATTCATCCTCTTTGAGATTATTCTACAGTGGCTCAAAGGTGCCAGGGTCAGAAGATGATTTTGTATGTCACTGAAAGGTATGCTATTAATAATTTACGAGCACGATGGCGCCCTGCAAACAAAGATGGTGAAACAAATAGCATGGCTCAAATATAGAATCCATTGTTCAATATGAATATTGAAAAGTTGAATGTAGTGTAGCTGAGATATGACCCTTTTGTATGTTCTACTAGGAGGAGTTTATATCTAAACATGATTTGACCTAGGAAATTCGGAGCCCCGAATCGTCAACCCACTCGATTTACATTTTAAGACATCTTATGAGATTTCGCAATGTTGTTACACTGTTAATGTTATGGATAATTTATCTTATGCTTAGTCTTCATTGATTTTGGAACA

Coding sequence (CDS)

ATGGATTTTGATGAGTATGATTATTTGGAGAAAACAGTTGAAAATCCTGAGGGGCAGAAACTGAAGGAAACTGCCAATGGCGGCGATGCAGAAATTAAGTCTGGAGATAAACATCGTAGTCGAAGTTCAAAGTATAAGAATGATGGTAAAGACGATGGGGAACATAGGTCGAAGCGTTCAAAATCAGAAGATGGGTCACGGGATCATGATCGACATAGAGATAGGACTTCTTCCCGGCACCGGTCTAGGTCTAGAGATAGAGACCGTGATCGGCACCGAAGCAGTAAGGAATATAGGGGAAAAGAGGACAGAGAAAGGAATCGGGAAGAGAGGAGCAGTAAGGACAGAGATGCGGACAGAGATAAAGAACGTGTTCATGATCGTGATAGACGAGGTAGAGATGGTGAAAGGGATAAGGAAAGAGAACGGTCACGTCGAAGTAGAAGTCGTTCGGAAAGACATCGCAGTGATAGAGATGAAAGCATAAGAGAGAGGAGGCAAGATAATGAATTCAGAGAAAGGGAAAAGGAGAGAGAGTCGAGAGAGCGAGGAAGAGATGGCAGAAGATATAAAGAGAAAAAAGAAGAAGCCGCAGAACCAGAAGCTGATCCTGAAAGGGACCAGAGGACTGTTTTTGCCTATCAGATAAGTTTAAAGGCAACTGAAAGAGACGTGTATGAATTCTTCTCCAGGGCTGGTAAGGTGCGAGATGTACGTCTCATAATGGATCGTAATTCAAGACGTTCTAAAGGCGTTGGGTATGTTGAATTTGTGGATGCAATGTCTGTGCCCATGGCTATAGCACTTTCAGGCCAGCTCCTGCTTAGTCAACCTGTGATGGTAAAGCCATCTGAAGCTGAGAAGAACCAGGTTCAGTCAACTTCTGCTGTCGGTGGAGCAGGTGGAGTAATGGGCCCTTACTCTGGTGGTGCCAGAAGGTTATATGTTGGCAATCTGCATCCCAACATAACAGAAGATAACCTTCGTCAGGTTTTTGGAGCTTTTGGCACTGTGGAACTGGTTCAGATGCCTGTTGATGAAAGTGGGCATTGCAAGGGTTTTGGTTTTGTTCAGTTCACACGTCTTGAAGATGCTAGAAATGCACTTAGTTTGAATGGACAACTGGAAATTGCTGGTCGAACGATAAAGGTGTCCACAGTCACAGATCAGCCTGGACTGCAAGATATTGGAGCAACTACTGGAGACCTTGATGATGAAGATGGAGGTGGCTTGTCCTTAAACGCAAGTTCTCGAGCATCTCTGATGCAGAAGCTGGACCGTACTGGCACCGCTTCTAGCATTGCTGGTTCTTTAGGTACACATGTCGTTAATAACACAGGCGCTGCTTTGCCAATAGCGCCGATTCTTGGAGCTGCAACTATTCCTTCCCTTGCTACTTCTTTGGCCACCGTCCCTACTTTTCCTGGACTCGGTGCAGGCATTCAGCTTCCCACTGCTACTGCCAATTTACTTGGTGTTGGTTCTCCAAGTGAATGCTTACTATTGAAGAATATGTTTGATCCTACAGCTGAGTCGGAACCAAATTTTGACCTGGATATCAGAGACGATGTTGAGGAGGAATGCTCTAGGTTTGGAAAATTGAGACACATATATGTCGACAAGAATAGCGCGGGTTTTGTATATTTAAGATTTGAAAATTCACAGTCTGCAATGGATGCACAACATGCCCTTAATGGAAGATGGTTTGCTGGCAAAATGATCGGTGCAACTTTCATGGACATCTCGAGCTACGAAGCGAAATTTCCCGACAGCATATAG

Protein sequence

MDFDEYDYLEKTVENPEGQKLKETANGGDAEIKSGDKHRSRSSKYKNDGKDDGEHRSKRSKSEDGSRDHDRHRDRTSSRHRSRSRDRDRDRHRSSKEYRGKEDRERNREERSSKDRDADRDKERVHDRDRRGRDGERDKERERSRRSRSRSERHRSDRDESIRERRQDNEFREREKERESRERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAVGGAGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFVQFTRLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGATTGDLDDEDGGGLSLNASSRASLMQKLDRTGTASSIAGSLGTHVVNNTGAALPIAPILGAATIPSLATSLATVPTFPGLGAGIQLPTATANLLGVGSPSECLLLKNMFDPTAESEPNFDLDIRDDVEEECSRFGKLRHIYVDKNSAGFVYLRFENSQSAMDAQHALNGRWFAGKMIGATFMDISSYEAKFPDSI

Homology

[Close]

BLAST of Tan0001503 vs. ExPASy Swiss-Prot
Match: Q5RC80 (RNA-binding protein 39 OS=Pongo abelii OX=9601 GN=RBM39 PE=2 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 7.0e-62
Identity = 204/538 (37.92%), Postives = 288/538 (53.53%), Query Frame = 0


Query: 61  KSEDGSRDHDRHRDRTSSRHRSRSRDRDRDRHRSSKEYRGKEDRERNREERSSKDRDADR 120
           K E+     + H +R+  R +S+SR R  +R RS  + R K  R+R R++  S++R   R
Sbjct: 17  KDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKER-KRSRDRERKKSKSRERKRSR 76

Query: 121 DKERVHDRDRRGRDGERDKERERSRRSRSRSERHRSDRDESIRERRQDNEFREREKERES 180
            KER   R R          R+R  R R RS       + +IR      +       + S
Sbjct: 77  SKERRRSRSR---------SRDRRFRGRYRSPYSGPKFNSAIR-----GKIGLPHSIKLS 136

Query: 181 RERGRDGRRYKEKKEEAAEP---EADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRD 240
           R R R    +++ K    EP       ERD RTVF  Q++ +   RD+ EFFS  GKVRD
Sbjct: 137 RRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRD 196

Query: 241 VRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAV 300
           VR+I DRNSRRSKG+ YVEFVD  SVP+AI L+GQ +L  P++V+ S+AEKN+  + +  
Sbjct: 197 VRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANN 256

Query: 301 GGAGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVD-ESGHCKGFGF 360
              G      S G  RLYVG+LH NITED LR +F  FG +E +Q+ +D E+G  KG+GF
Sbjct: 257 LQKG------SAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 316

Query: 361 VQFTRLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGATTGDLDDEDGGGLSLNAS 420
           + F+  E A+ AL      E+AGR +KV  VT++       +   D D+ +  G+ L  +
Sbjct: 317 ITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFL-DSDELERTGIDLGTT 376

Query: 421 SRASLMQKLDRTGTASSIAGSLGTHVVNNTGAALPIAPILGAATIPSLATSLATVPTFPG 480
            R  LM +L         A   G  +      AL ++  L    +  L T L+       
Sbjct: 377 GRLQLMARL---------AEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASA 436

Query: 481 LGAGIQL-PTATANLLGVGSPSECLLLKNMFDPTAESEPNFDLDIRDDVEEECSRFGKLR 540
           L A   + P AT          +C  L NMF+P  E E  +D +I+DDV EEC++ G + 
Sbjct: 437 LAAAASVQPLAT----------QCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVI 496

Query: 541 HIYVDKNSA-GFVYLRFENSQSAMDAQHALNGRWFAGKMIGATFMDISSYEAKFPDSI 593
           HIYVDKNSA G VY++  +  +A+ A +AL+GRWFAGKMI A ++ + +Y   FPDS+
Sbjct: 497 HIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSM 513

[Close]

BLAST of Tan0001503 vs. ExPASy Swiss-Prot
Match: Q8VH51 (RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=2)

HSP 1 Score: 236.5 bits (602), Expect = 7.7e-61
Identity = 206/546 (37.73%), Postives = 291/546 (53.30%), Query Frame = 0


Query: 61  KSEDGSRDHDRHRDRTSSRHRSRSRDRDRDRHRSSKEYRGKEDRERNREERSSKDRDADR 120
           K E+     + H +R+  R +S+SR R  +R RS  + R K  R+R R++  S++R   R
Sbjct: 17  KDENKLNSANGHEERSKKRKKSKSRSRSHERKRSKSKER-KRSRDRERKKSKSRERKRSR 76

Query: 121 DKERVHDRDRRGRDGERDKERERSRRSRSRSERHRSDRDESIRERRQDNEFREREKERES 180
            KER   R R          R+R  R R RS       + +IR      +       + S
Sbjct: 77  SKERRRSRSR---------SRDRRFRGRYRSPYSGPKFNSAIR-----GKIGLPHSIKLS 136

Query: 181 RERGRDGRRYKEKKEEAAEP---EADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRD 240
           R R R    +++ K    EP       ERD RTVF  Q++ +   RD+ EFFS  GKVRD
Sbjct: 137 RRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRD 196

Query: 241 VRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAV 300
           VR+I DRNSRRSKG+ YVEFVD  SVP+AI L+GQ +L  P++V+ S+AEKN+  + +  
Sbjct: 197 VRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANN 256

Query: 301 GGAGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVD-ESGHCKGFGF 360
              G      S G  RLYVG+LH NITED LR +F  FG +E +Q+ +D E+G  KG+GF
Sbjct: 257 LQKG------SAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 316

Query: 361 VQFTRLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGATTGDLDDEDGGGLSLNAS 420
           + F+  E A+ AL      E+AGR +KV  VT++       +   D D+ +  G+ L  +
Sbjct: 317 ITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFL-DSDELERTGIDLGTT 376

Query: 421 SRASLMQKL-DRTG--------TASSIAGSLGTHVVNNTGAALPIAPILGAATIPSLATS 480
            R  LM +L + TG         A  ++GSL    V      + +   L   T  S   +
Sbjct: 377 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAA 436

Query: 481 LATVPTFPGLGAGIQLPTATANLLGVGSPSECLLLKNMFDPTAESEPNFDLDIRDDVEEE 540
            A+V            P AT          +C  L NMF+P  E E  +D +I+DDV EE
Sbjct: 437 AASVQ-----------PLAT----------QCFQLSNMFNPQTEEEVGWDTEIKDDVIEE 496

Query: 541 CSRFGKLRHIYVDKNSA-GFVYLRFENSQSAMDAQHALNGRWFAGKMIGATFMDISSYEA 593
           C++ G + HIYVDKNSA G VY++  +  +A+ A +AL+GRWFAGKMI A ++ + +Y  
Sbjct: 497 CNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 519

[Close]

BLAST of Tan0001503 vs. ExPASy Swiss-Prot
Match: Q14498 (RNA-binding protein 39 OS=Homo sapiens OX=9606 GN=RBM39 PE=1 SV=2)

HSP 1 Score: 236.1 bits (601), Expect = 1.0e-60
Identity = 206/546 (37.73%), Postives = 291/546 (53.30%), Query Frame = 0


Query: 61  KSEDGSRDHDRHRDRTSSRHRSRSRDRDRDRHRSSKEYRGKEDRERNREERSSKDRDADR 120
           K E+     + H +R+  R +S+SR R  +R RS  + R K  R+R R++  S++R   R
Sbjct: 17  KDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKER-KRSRDRERKKSKSRERKRSR 76

Query: 121 DKERVHDRDRRGRDGERDKERERSRRSRSRSERHRSDRDESIRERRQDNEFREREKERES 180
            KER   R R          R+R  R R RS       + +IR      +       + S
Sbjct: 77  SKERRRSRSR---------SRDRRFRGRYRSPYSGPKFNSAIR-----GKIGLPHSIKLS 136

Query: 181 RERGRDGRRYKEKKEEAAEP---EADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRD 240
           R R R    +++ K    EP       ERD RTVF  Q++ +   RD+ EFFS  GKVRD
Sbjct: 137 RRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRD 196

Query: 241 VRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAV 300
           VR+I DRNSRRSKG+ YVEFVD  SVP+AI L+GQ +L  P++V+ S+AEKN+  + +  
Sbjct: 197 VRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANN 256

Query: 301 GGAGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVD-ESGHCKGFGF 360
              G      S G  RLYVG+LH NITED LR +F  FG +E +Q+ +D E+G  KG+GF
Sbjct: 257 LQKG------SAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF 316

Query: 361 VQFTRLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGATTGDLDDEDGGGLSLNAS 420
           + F+  E A+ AL      E+AGR +KV  VT++       +   D D+ +  G+ L  +
Sbjct: 317 ITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFL-DSDELERTGIDLGTT 376

Query: 421 SRASLMQKL-DRTG--------TASSIAGSLGTHVVNNTGAALPIAPILGAATIPSLATS 480
            R  LM +L + TG         A  ++GSL    V      + +   L   T  S   +
Sbjct: 377 GRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAA 436

Query: 481 LATVPTFPGLGAGIQLPTATANLLGVGSPSECLLLKNMFDPTAESEPNFDLDIRDDVEEE 540
            A+V            P AT          +C  L NMF+P  E E  +D +I+DDV EE
Sbjct: 437 AASVQ-----------PLAT----------QCFQLSNMFNPQTEEEVGWDTEIKDDVIEE 496

Query: 541 CSRFGKLRHIYVDKNSA-GFVYLRFENSQSAMDAQHALNGRWFAGKMIGATFMDISSYEA 593
           C++ G + HIYVDKNSA G VY++  +  +A+ A +AL+GRWFAGKMI A ++ + +Y  
Sbjct: 497 CNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHN 519

[Close]

BLAST of Tan0001503 vs. ExPASy Swiss-Prot
Match: O13845 (RNA-binding protein rsd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rsd1 PE=1 SV=2)

HSP 1 Score: 157.9 bits (398), Expect = 3.5e-37
Identity = 170/563 (30.20%), Postives = 262/563 (46.54%), Query Frame = 0


Query: 40  SRSSKYKNDGKDDGEHRSKRSKSEDGSRDHDRHRDRTSSRHRSRSRDRDRDRHRSSKEYR 99
           +RSSK     +D G        ++D   +   HR   + RH  RS     D    S    
Sbjct: 85  ARSSKQSFQREDSG-------YNDDVVTNSSSHR---TPRHHRRSYSPRSDYGSRSPSPH 144

Query: 100 GKEDRERNREERSSKDRDADRDKERVHDRDRRGRDGERDKERERSRRSRSRSERHRSDRD 159
              D  ++R    S+DRD      R      R R    D  R     SR    R R +  
Sbjct: 145 SSVDSHQSRSPVRSRDRDRSSRSSRSRHPSSRSRHRYDDYSRSPPYSSRHSRSRRRYEER 204

Query: 160 ESIRERRQDNEFREREKERESRERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLK 219
            S   R  D ++ +   +  S ER R   R +E+  + +E     ERD+RTVF  Q++ +
Sbjct: 205 SSRSSRAHDYDYEDLRDDDRSHERKRSRSRPRERSSKLSE----EERDRRTVFVSQLANR 264

Query: 220 ATERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPV 279
            T R++Y+FF +AG VRD +++ D+ S RSKGV YVEF    SV  AIALSG+ LL  PV
Sbjct: 265 LTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAAIALSGKRLLGLPV 324

Query: 280 MVKPSEAEKN-QVQSTSAVGGAGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTV 339
           +V+ +EAEKN + +  + +  A     P+     RL V N+H N+T+++++ +F  FG +
Sbjct: 325 IVQLTEAEKNRKAREAAELARAASAEIPF----HRLCVSNIHFNLTDEDVKAIFEPFGDI 384

Query: 340 ELVQMPVDESGHCKGFGFVQFTRLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGA 399
           E V +  D+    KGFG++Q+     ARNAL      ++AGR ++V    D+        
Sbjct: 385 EFVHLQRDDQNRSKGFGYIQYRNPISARNALEKMNGFDLAGRNMRVCLGNDK-------- 444

Query: 400 TTGDLDDEDGGGLSLNASSRASLMQKLDRT------GTASSIAGSLGTHVVNNTGAALPI 459
                             + +S++++ D T         S   G   T+   +   A P+
Sbjct: 445 --------------FTTETTSSMLKRFDETLARQERSQPSQRNGGSSTYESQDYREAAPL 504

Query: 460 APILGAA---TIPSLATSLATVPTFPGLGAGIQLPTATANLLGVGSPSECLLLKNMFDPT 519
           +P    +   T   L   LA           +  P            S C LL+NMF+P 
Sbjct: 505 SPTEEESRPITRDELMKKLARSEDISDNSKLVSEPEPPIR-------SRCALLENMFNPA 564

Query: 520 AESEPNFDLDIRDDVEEEC-SRFGKLRHIYVDKNSAGFVYLRFENSQSAMDAQHALNGRW 579
            E+ PN+  ++  DV+EEC  ++GK+ HI V  N  G ++++FEN+  A  A   L+ RW
Sbjct: 565 EETSPNWVQELEQDVKEECDEKYGKVVHIAVVPNELGQIFVKFENADFAEKAITGLHQRW 600

Query: 580 FAGKMIGATFMDISSYEAKFPDS 592
           F G+ I A+ +  + Y  KFP++
Sbjct: 625 FGGRTIKASILPETDYYFKFPNA 600

[Close]

BLAST of Tan0001503 vs. ExPASy Swiss-Prot
Match: Q86U06 (Probable RNA-binding protein 23 OS=Homo sapiens OX=9606 GN=RBM23 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 4.9e-31
Identity = 158/436 (36.24%), Postives = 221/436 (50.69%), Query Frame = 0


Query: 61  KSEDGSRDHDRHRDRTSSRHRSRSRDRDRDRHRSSKEYRGKEDRERNREERSSKDRDADR 120
           K ED  +  +  +D  S+   S S         S  E  G        +++ S+  +  R
Sbjct: 20  KEEDEQQRKEVKKDYPSNTTSSTS--------NSGNETSGSSTIGETSKKKRSRSHNKSR 79

Query: 121 DKERVHDRDRRGRDGERDKERERSRRSRS--RSERHRSDRDESIRERRQDNEFREREKER 180
           D++R   RD       RD+ R R+ RSRS  R  RHRS       +RR  +E R R+  R
Sbjct: 80  DRKRSRSRD-------RDRYRRRNSRSRSPGRQCRHRS----RSWDRRHGSESRSRDHRR 139

Query: 181 ESRERGRD-----GRRYKEKK----------EEAAEPEADPERDQRTVFAYQISLKATER 240
           E R   R      G RY   K           E  +  +  ERD RTVF  Q++ +   R
Sbjct: 140 EDRVHYRSPPLATGYRYGHSKSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPR 199

Query: 241 DVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKP 300
           D+ +FFS  GKVRDVR+I DRNSRRSKG+ YVEF +  SVP+AI L+GQ LL  P++V+ 
Sbjct: 200 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPIIVQA 259

Query: 301 SEAEKNQVQSTSAVGGAGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVE-LVQ 360
           S+AEKN++ + +     G      +GG  RLYVG+LH NITED LR +F  FG ++ +V 
Sbjct: 260 SQAEKNRLAAMANNLQKG------NGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVL 319

Query: 361 MPVDESGHCKGFGFVQFTRLEDARNALSLNGQLEIAGRTIKVSTVTDQ-PGLQDIGATTG 420
           M   ++G  KG+GF+ F+  E AR AL      E+AGR ++V  VT++  G  DI    G
Sbjct: 320 MKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRVGHVTERLDGGTDITFPDG 379

Query: 421 DLDDEDGGGLSLNASSRASLMQKL------DRTGTASSIAGSLGTHVVNNTGAALPIAPI 471
           D + + G     +A  R  LM KL          TA++ A +           A+P+  +
Sbjct: 380 DQELDLG-----SAGGRFQLMAKLAEGAGIQLPSTAAAAAAAAAQAAALQLNGAVPLGAL 425

[Close]

BLAST of Tan0001503 vs. NCBI nr
Match: XP_022136109.1 (RNA-binding protein 39 isoform X2 [Momordica charantia])

HSP 1 Score: 984.9 bits (2545), Expect = 2.9e-283
Identity = 538/594 (90.57%), Postives = 563/594 (94.78%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKLKETANGGDAEIKSGDKHRSRSSKYKNDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQK+KETANGGDAE+KSGDKHRSRSSKYK+DGKDDGEHRSKRS
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHRSRSSKYKSDGKDDGEHRSKRS 60

Query: 61  KSEDGSRDHDRHRDRTSSRHRSRSRDRDRDRHRSSKEYRGKEDRERNREERSSKDRDADR 120
           KSED SRDHDRHRDRTSS+HRSRS+DRD DR RSSKEYR KED+ERNREERSSKDRD DR
Sbjct: 61  KSEDESRDHDRHRDRTSSQHRSRSKDRDXDRRRSSKEYREKEDKERNREERSSKDRDVDR 120

Query: 121 DKERVHDRD---RRGRDGERDKERERSRRSRSRSERHRSDRDESIRERRQDNEFREREKE 180
           D++R HDRD   RRGRDGERD+ERERSRRSRS SERH SDRDESIRER +DNEF+EREKE
Sbjct: 121 DRDRGHDRDRESRRGRDGERDRERERSRRSRSHSERHCSDRDESIRERSRDNEFKEREKE 180

Query: 181 RESRERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRD 240
           RE+RERGRDGRRYKEKKE+ AEPEADPERDQRTVFAYQI LKATERDVYEFFSRAGKVRD
Sbjct: 181 RETRERGRDGRRYKEKKEDGAEPEADPERDQRTVFAYQICLKATERDVYEFFSRAGKVRD 240

Query: 241 VRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAV 300
           VRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQ LL QPVMVKPSEAEKNQVQSTSA 
Sbjct: 241 VRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQPLLGQPVMVKPSEAEKNQVQSTSAA 300

Query: 301 GGAGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFV 360
           GG GG MGPYSGGARRLYVGNLHP ITED +RQVFG+FGTVELVQMP+DE+GHCKGFGFV
Sbjct: 301 GGTGGAMGPYSGGARRLYVGNLHPEITEDMIRQVFGSFGTVELVQMPLDETGHCKGFGFV 360

Query: 361 QFTRLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGATTGDLDDEDGGGLSLNASS 420
           QFTRLEDARNALSLNGQLEI GR IKVSTVTDQPG+QDIGA TGDLDDEDGGGLSLNASS
Sbjct: 361 QFTRLEDARNALSLNGQLEIGGRMIKVSTVTDQPGMQDIGANTGDLDDEDGGGLSLNASS 420

Query: 421 RASLMQKLDRTGTASSIAGSLGTHVVNNTGAALPIAPILGAATIPSLATSLATVPTFPGL 480
           RASLMQKLDRTGTASSIAGSLGTHVVNNTGA LP+APILGAA+IPSL  SLAT+P FPGL
Sbjct: 421 RASLMQKLDRTGTASSIAGSLGTHVVNNTGATLPMAPILGAASIPSLVPSLATIPAFPGL 480

Query: 481 GAGIQLPTATANLLGVGSPSECLLLKNMFDPTAESEPNFDLDIRDDVEEECSRFGKLRHI 540
           GAGIQ+PT TANLLGVG+PSECLLLKNMFDPTAESEPNFDLDIRDDVEEECSRFGKLRHI
Sbjct: 481 GAGIQVPTVTANLLGVGAPSECLLLKNMFDPTAESEPNFDLDIRDDVEEECSRFGKLRHI 540

Query: 541 YVDKNSAGFVYLRFENSQSAMDAQHALNGRWFAGKMIGATFMDISSYEAKFPDS 592
           +VDKNSAGFVYLRFENSQSAM+AQ ALNGRWFAGKMIGATFMDI SYEAKFPDS
Sbjct: 541 HVDKNSAGFVYLRFENSQSAMEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDS 594

[Close]

BLAST of Tan0001503 vs. NCBI nr
Match: XP_011658601.1 (RNA-binding protein 39 isoform X1 [Cucumis sativus] >XP_031744308.1 RNA-binding protein 39 isoform X1 [Cucumis sativus] >XP_031744309.1 RNA-binding protein 39 isoform X1 [Cucumis sativus] >KGN43267.1 hypothetical protein Csa_020331 [Cucumis sativus])

HSP 1 Score: 979.5 bits (2531), Expect = 1.2e-281
Identity = 536/593 (90.39%), Postives = 561/593 (94.60%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKLKETANGGDAEIKSGDKHRSRSSKYKNDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQK+KETANGGD E+KSGDKH SRSSKYK+DGKDDGEHRSK  
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDGEHRSKHL 60

Query: 61  KSEDGSRDHDRHRDRTSSRHRSRSRDRDRDRHRSSKEYRGKEDRERNREERSSKDRDADR 120
           KS+D SRD DRHRDRTSSRHRSRSR+RDRDRHRSSKE RGKEDRE NREERSSKDRD DR
Sbjct: 61  KSDDESRDRDRHRDRTSSRHRSRSRERDRDRHRSSKENRGKEDREGNREERSSKDRDVDR 120

Query: 121 DKERVHDRDRRGRDGERDKERERSRRSRSRSERHRSDRDESIRERRQDNEFREREKERES 180
           DKER HDRDRRGRDGER++ERE+SRRSRSRSERHRSDRD+ IRER +DNE REREKERES
Sbjct: 121 DKERSHDRDRRGRDGERNREREQSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES 180

Query: 181 RERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240
           RERGRDGRRYK+KK+E AEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL
Sbjct: 181 RERGRDGRRYKDKKDETAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240

Query: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAVGGA 300
           IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSA GG 
Sbjct: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP 300

Query: 301 GGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFVQFT 360
           GG MGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGF+QFT
Sbjct: 301 GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFIQFT 360

Query: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGATTGDLDDEDGGGLSLNASSRAS 420
           RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQD+GA+TGDLD+EDGGGLSLNASSRAS
Sbjct: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS 420

Query: 421 LMQKLDRTGTASSIAGSLGTHVVNNTGAALPIAPILGAATIPSLA--TSLATVPTFPGLG 480
           LMQKLDRTG ASSIAGSLGTHVVNNTGA +P APILG ATIPSL+  TSLA  P FPGLG
Sbjct: 421 LMQKLDRTGAASSIAGSLGTHVVNNTGATMP-APILGGATIPSLSVGTSLAAFPAFPGLG 480

Query: 481 AGIQLPTATANLLGVGSPSECLLLKNMFDPTAESEPNFDLDIRDDVEEECSRFGKLRHIY 540
           AG+Q+P  TANLLGVG+PSECLLLKNMFDPTAESEP FDLDIRDDVEEECSRFGKL+HIY
Sbjct: 481 AGVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIY 540

Query: 541 VDKNSAGFVYLRFENSQSAMDAQHALNGRWFAGKMIGATFMDISSYEAKFPDS 592
           VD+NSAGFVYLRFE S+SAM+AQ ALNGRWFAGKMIGATFMDI SYEAKFPDS
Sbjct: 541 VDRNSAGFVYLRFEKSESAMEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDS 592

[Close]

BLAST of Tan0001503 vs. NCBI nr
Match: XP_022136108.1 (RNA-binding protein 39 isoform X1 [Momordica charantia])

HSP 1 Score: 978.8 bits (2529), Expect = 2.1e-281
Identity = 538/599 (89.82%), Postives = 563/599 (93.99%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKLKETANGGDAEIKSGDKHRSRSSKYKNDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQK+KETANGGDAE+KSGDKHRSRSSKYK+DGKDDGEHRSKRS
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHRSRSSKYKSDGKDDGEHRSKRS 60

Query: 61  KSEDGSRDHDRHRDRTSSRHRSRSRDRDRDRHRSSKEYRGKEDRERNREERSSKDRDADR 120
           KSED SRDHDRHRDRTSS+HRSRS+DRD DR RSSKEYR KED+ERNREERSSKDRD DR
Sbjct: 61  KSEDESRDHDRHRDRTSSQHRSRSKDRDXDRRRSSKEYREKEDKERNREERSSKDRDVDR 120

Query: 121 DKERVHDRD---RRGRDGERDKERERSRRSRSRSERHRSDRDESIRERRQDNEFREREKE 180
           D++R HDRD   RRGRDGERD+ERERSRRSRS SERH SDRDESIRER +DNEF+EREKE
Sbjct: 121 DRDRGHDRDRESRRGRDGERDRERERSRRSRSHSERHCSDRDESIRERSRDNEFKEREKE 180

Query: 181 RESRERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRD 240
           RE+RERGRDGRRYKEKKE+ AEPEADPERDQRTVFAYQI LKATERDVYEFFSRAGKVRD
Sbjct: 181 RETRERGRDGRRYKEKKEDGAEPEADPERDQRTVFAYQICLKATERDVYEFFSRAGKVRD 240

Query: 241 VRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAV 300
           VRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQ LL QPVMVKPSEAEKNQVQSTSA 
Sbjct: 241 VRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQPLLGQPVMVKPSEAEKNQVQSTSAA 300

Query: 301 GGAGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFV 360
           GG GG MGPYSGGARRLYVGNLHP ITED +RQVFG+FGTVELVQMP+DE+GHCKGFGFV
Sbjct: 301 GGTGGAMGPYSGGARRLYVGNLHPEITEDMIRQVFGSFGTVELVQMPLDETGHCKGFGFV 360

Query: 361 QFTRLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGATTGDLDDEDGGGL-----S 420
           QFTRLEDARNALSLNGQLEI GR IKVSTVTDQPG+QDIGA TGDLDDEDGGGL     S
Sbjct: 361 QFTRLEDARNALSLNGQLEIGGRMIKVSTVTDQPGMQDIGANTGDLDDEDGGGLVKESSS 420

Query: 421 LNASSRASLMQKLDRTGTASSIAGSLGTHVVNNTGAALPIAPILGAATIPSLATSLATVP 480
           LNASSRASLMQKLDRTGTASSIAGSLGTHVVNNTGA LP+APILGAA+IPSL  SLAT+P
Sbjct: 421 LNASSRASLMQKLDRTGTASSIAGSLGTHVVNNTGATLPMAPILGAASIPSLVPSLATIP 480

Query: 481 TFPGLGAGIQLPTATANLLGVGSPSECLLLKNMFDPTAESEPNFDLDIRDDVEEECSRFG 540
            FPGLGAGIQ+PT TANLLGVG+PSECLLLKNMFDPTAESEPNFDLDIRDDVEEECSRFG
Sbjct: 481 AFPGLGAGIQVPTVTANLLGVGAPSECLLLKNMFDPTAESEPNFDLDIRDDVEEECSRFG 540

Query: 541 KLRHIYVDKNSAGFVYLRFENSQSAMDAQHALNGRWFAGKMIGATFMDISSYEAKFPDS 592
           KLRHI+VDKNSAGFVYLRFENSQSAM+AQ ALNGRWFAGKMIGATFMDI SYEAKFPDS
Sbjct: 541 KLRHIHVDKNSAGFVYLRFENSQSAMEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDS 599

[Close]

BLAST of Tan0001503 vs. NCBI nr
Match: XP_008447936.1 (PREDICTED: RNA-binding protein 39 isoform X1 [Cucumis melo] >XP_016900486.1 PREDICTED: RNA-binding protein 39 isoform X1 [Cucumis melo])

HSP 1 Score: 976.9 bits (2524), Expect = 8.0e-281
Identity = 535/593 (90.22%), Postives = 560/593 (94.44%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKLKETANGGDAEIKSGDKHRSRSSKYKNDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQK+KETANGGD E+KSGDKH SRS KYK+DGKDDGEHRSKRS
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRS 60

Query: 61  KSEDGSRDHDRHRDRTSSRHRSRSRDRDRDRHRSSKEYRGKEDRERNREERSSKDRDADR 120
           KS+D SRD DRHRDRTSSRHRSRSR+RDRD+HRSSKE RGK+DRE NREERSSKDRD DR
Sbjct: 61  KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR 120

Query: 121 DKERVHDRDRRGRDGERDKERERSRRSRSRSERHRSDRDESIRERRQDNEFREREKERES 180
           DKER HDRDRRGRDGER++ERERSRRSRSRSERHRSDRD+ IRER +DNE REREKERES
Sbjct: 121 DKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES 180

Query: 181 RERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240
           RERGRDGRRYK+KK+EAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL
Sbjct: 181 RERGRDGRRYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240

Query: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAVGGA 300
           IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSA GG 
Sbjct: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP 300

Query: 301 GGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFVQFT 360
           GG MGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMP+DESGHCKGFGF+QFT
Sbjct: 301 GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFT 360

Query: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGATTGDLDDEDGGGLSLNASSRAS 420
           RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQD+GA+TGDLD+EDGGGLSLNASSRAS
Sbjct: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS 420

Query: 421 LMQKLDRTGTASSIAGSLGTHVVNNTGAALPIAPILGAATIPSL--ATSLATVPTFPGLG 480
           LMQKLDRTG ASSIAGSLGTHVVNNTGA +P APILG ATIPSL   TSLA  P FPGLG
Sbjct: 421 LMQKLDRTGAASSIAGSLGTHVVNNTGATMP-APILGGATIPSLGVGTSLAAFPAFPGLG 480

Query: 481 AGIQLPTATANLLGVGSPSECLLLKNMFDPTAESEPNFDLDIRDDVEEECSRFGKLRHIY 540
           AG+Q+P  TANLLGVG+PSECLLLKNMFDPTAESEP FDLDIRDDVEEECSRFGKL+HIY
Sbjct: 481 AGVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIY 540

Query: 541 VDKNSAGFVYLRFENSQSAMDAQHALNGRWFAGKMIGATFMDISSYEAKFPDS 592
           VDKNSAGFVYLRFE  +SA +AQ ALNGRWFAGKMIGATFMDI SYEAKFPDS
Sbjct: 541 VDKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDS 592

[Close]

BLAST of Tan0001503 vs. NCBI nr
Match: XP_022969035.1 (RNA-binding protein 39 [Cucurbita maxima] >XP_022969036.1 RNA-binding protein 39 [Cucurbita maxima])

HSP 1 Score: 974.5 bits (2518), Expect = 4.0e-280
Identity = 532/594 (89.56%), Postives = 560/594 (94.28%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKLKETANGGDAEIKSGDKHRSRSSKYKNDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQK+KETANGGDAE+KSGDKHRSRSSKYK DGKDDGEHRSKRS
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHRSRSSKYKTDGKDDGEHRSKRS 60

Query: 61  KSEDGSRDHDRHRDRTSSRHRSRSRDRDRDRHRSSKEYRGKEDRERNREERSSKDRDADR 120
           KSED S DHDRHRDRTSSRHRSRSRDRDRDRH S KE+RGKEDRE+N+EERSSKDRD DR
Sbjct: 61  KSEDESLDHDRHRDRTSSRHRSRSRDRDRDRHSSGKEFRGKEDREKNQEERSSKDRDVDR 120

Query: 121 DKERVHDRDRRGRDGERDKERERSRRSRSRSERHRSDRDESIRERRQDNEFREREKERES 180
           DKERVHD DRRGRDGE+D+ERERS RSRS SERHRSDRDES+R+R +DNEFREREKERES
Sbjct: 121 DKERVHDHDRRGRDGEKDRERERSHRSRSHSERHRSDRDESMRQRTRDNEFREREKERES 180

Query: 181 RERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240
           RERGRDGRR+KEKKE+  EPEADPERDQRTVFAYQISLKATERDV+EFFSRAGKVRDVRL
Sbjct: 181 RERGRDGRRHKEKKEDGTEPEADPERDQRTVFAYQISLKATERDVFEFFSRAGKVRDVRL 240

Query: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAVGGA 300
           IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQ QSTSA  G 
Sbjct: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQAQSTSAAAGP 300

Query: 301 GGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFVQFT 360
           GGVMGPY+GGARRLYVGNLHPNITEDNLRQVFGAFG VELVQMP+DESGHCKGFGF+QF+
Sbjct: 301 GGVMGPYTGGARRLYVGNLHPNITEDNLRQVFGAFGIVELVQMPLDESGHCKGFGFIQFS 360

Query: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGATTGDLDDEDGGGLSLNASSRAS 420
           RLEDARNALSLNGQLEIAGR IKVSTVTDQPGLQDIGA+TGDLDDEDG GLSLNASSRAS
Sbjct: 361 RLEDARNALSLNGQLEIAGRMIKVSTVTDQPGLQDIGASTGDLDDEDGVGLSLNASSRAS 420

Query: 421 LMQKLDRTGTASSIAGSLGTHVVNNTGAALPIAPILGAATIPSL--ATSLATVPTFPGLG 480
           LMQKLDRTGTASSIAGSLGTHVVNNTGA +P+APILG  TIPSL  ATSL +VP FPGLG
Sbjct: 421 LMQKLDRTGTASSIAGSLGTHVVNNTGATMPMAPILGVGTIPSLGVATSLVSVPAFPGLG 480

Query: 481 -AGIQLPTATANLLGVGSPSECLLLKNMFDPTAESEPNFDLDIRDDVEEECSRFGKLRHI 540
            AG+Q+PT  ANLLGVG+PSECLLLKNMFDPTAE EP FD+DIRDDVEEECSRFGKL+HI
Sbjct: 481 AAGVQVPTVAANLLGVGTPSECLLLKNMFDPTAELEPTFDMDIRDDVEEECSRFGKLKHI 540

Query: 541 YVDKNSAGFVYLRFENSQSAMDAQHALNGRWFAGKMIGATFMDISSYEAKFPDS 592
           YVDKNSAGFVYLRF NS++AMDAQ ALNGRWFAGKMIGATFMDI SYEAKFPDS
Sbjct: 541 YVDKNSAGFVYLRFANSEAAMDAQRALNGRWFAGKMIGATFMDIPSYEAKFPDS 594

[Close]

BLAST of Tan0001503 vs. ExPASy TrEMBL
Match: A0A6J1C3C8 (RNA-binding protein 39 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007883 PE=4 SV=1)

HSP 1 Score: 984.9 bits (2545), Expect = 1.4e-283
Identity = 538/594 (90.57%), Postives = 563/594 (94.78%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKLKETANGGDAEIKSGDKHRSRSSKYKNDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQK+KETANGGDAE+KSGDKHRSRSSKYK+DGKDDGEHRSKRS
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHRSRSSKYKSDGKDDGEHRSKRS 60

Query: 61  KSEDGSRDHDRHRDRTSSRHRSRSRDRDRDRHRSSKEYRGKEDRERNREERSSKDRDADR 120
           KSED SRDHDRHRDRTSS+HRSRS+DRD DR RSSKEYR KED+ERNREERSSKDRD DR
Sbjct: 61  KSEDESRDHDRHRDRTSSQHRSRSKDRDXDRRRSSKEYREKEDKERNREERSSKDRDVDR 120

Query: 121 DKERVHDRD---RRGRDGERDKERERSRRSRSRSERHRSDRDESIRERRQDNEFREREKE 180
           D++R HDRD   RRGRDGERD+ERERSRRSRS SERH SDRDESIRER +DNEF+EREKE
Sbjct: 121 DRDRGHDRDRESRRGRDGERDRERERSRRSRSHSERHCSDRDESIRERSRDNEFKEREKE 180

Query: 181 RESRERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRD 240
           RE+RERGRDGRRYKEKKE+ AEPEADPERDQRTVFAYQI LKATERDVYEFFSRAGKVRD
Sbjct: 181 RETRERGRDGRRYKEKKEDGAEPEADPERDQRTVFAYQICLKATERDVYEFFSRAGKVRD 240

Query: 241 VRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAV 300
           VRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQ LL QPVMVKPSEAEKNQVQSTSA 
Sbjct: 241 VRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQPLLGQPVMVKPSEAEKNQVQSTSAA 300

Query: 301 GGAGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFV 360
           GG GG MGPYSGGARRLYVGNLHP ITED +RQVFG+FGTVELVQMP+DE+GHCKGFGFV
Sbjct: 301 GGTGGAMGPYSGGARRLYVGNLHPEITEDMIRQVFGSFGTVELVQMPLDETGHCKGFGFV 360

Query: 361 QFTRLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGATTGDLDDEDGGGLSLNASS 420
           QFTRLEDARNALSLNGQLEI GR IKVSTVTDQPG+QDIGA TGDLDDEDGGGLSLNASS
Sbjct: 361 QFTRLEDARNALSLNGQLEIGGRMIKVSTVTDQPGMQDIGANTGDLDDEDGGGLSLNASS 420

Query: 421 RASLMQKLDRTGTASSIAGSLGTHVVNNTGAALPIAPILGAATIPSLATSLATVPTFPGL 480
           RASLMQKLDRTGTASSIAGSLGTHVVNNTGA LP+APILGAA+IPSL  SLAT+P FPGL
Sbjct: 421 RASLMQKLDRTGTASSIAGSLGTHVVNNTGATLPMAPILGAASIPSLVPSLATIPAFPGL 480

Query: 481 GAGIQLPTATANLLGVGSPSECLLLKNMFDPTAESEPNFDLDIRDDVEEECSRFGKLRHI 540
           GAGIQ+PT TANLLGVG+PSECLLLKNMFDPTAESEPNFDLDIRDDVEEECSRFGKLRHI
Sbjct: 481 GAGIQVPTVTANLLGVGAPSECLLLKNMFDPTAESEPNFDLDIRDDVEEECSRFGKLRHI 540

Query: 541 YVDKNSAGFVYLRFENSQSAMDAQHALNGRWFAGKMIGATFMDISSYEAKFPDS 592
           +VDKNSAGFVYLRFENSQSAM+AQ ALNGRWFAGKMIGATFMDI SYEAKFPDS
Sbjct: 541 HVDKNSAGFVYLRFENSQSAMEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDS 594

[Close]

BLAST of Tan0001503 vs. ExPASy TrEMBL
Match: A0A0A0K4Q5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014530 PE=4 SV=1)

HSP 1 Score: 979.5 bits (2531), Expect = 6.0e-282
Identity = 536/593 (90.39%), Postives = 561/593 (94.60%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKLKETANGGDAEIKSGDKHRSRSSKYKNDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQK+KETANGGD E+KSGDKH SRSSKYK+DGKDDGEHRSK  
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHHSRSSKYKSDGKDDGEHRSKHL 60

Query: 61  KSEDGSRDHDRHRDRTSSRHRSRSRDRDRDRHRSSKEYRGKEDRERNREERSSKDRDADR 120
           KS+D SRD DRHRDRTSSRHRSRSR+RDRDRHRSSKE RGKEDRE NREERSSKDRD DR
Sbjct: 61  KSDDESRDRDRHRDRTSSRHRSRSRERDRDRHRSSKENRGKEDREGNREERSSKDRDVDR 120

Query: 121 DKERVHDRDRRGRDGERDKERERSRRSRSRSERHRSDRDESIRERRQDNEFREREKERES 180
           DKER HDRDRRGRDGER++ERE+SRRSRSRSERHRSDRD+ IRER +DNE REREKERES
Sbjct: 121 DKERSHDRDRRGRDGERNREREQSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES 180

Query: 181 RERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240
           RERGRDGRRYK+KK+E AEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL
Sbjct: 181 RERGRDGRRYKDKKDETAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240

Query: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAVGGA 300
           IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSA GG 
Sbjct: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP 300

Query: 301 GGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFVQFT 360
           GG MGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGF+QFT
Sbjct: 301 GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFIQFT 360

Query: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGATTGDLDDEDGGGLSLNASSRAS 420
           RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQD+GA+TGDLD+EDGGGLSLNASSRAS
Sbjct: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS 420

Query: 421 LMQKLDRTGTASSIAGSLGTHVVNNTGAALPIAPILGAATIPSLA--TSLATVPTFPGLG 480
           LMQKLDRTG ASSIAGSLGTHVVNNTGA +P APILG ATIPSL+  TSLA  P FPGLG
Sbjct: 421 LMQKLDRTGAASSIAGSLGTHVVNNTGATMP-APILGGATIPSLSVGTSLAAFPAFPGLG 480

Query: 481 AGIQLPTATANLLGVGSPSECLLLKNMFDPTAESEPNFDLDIRDDVEEECSRFGKLRHIY 540
           AG+Q+P  TANLLGVG+PSECLLLKNMFDPTAESEP FDLDIRDDVEEECSRFGKL+HIY
Sbjct: 481 AGVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIY 540

Query: 541 VDKNSAGFVYLRFENSQSAMDAQHALNGRWFAGKMIGATFMDISSYEAKFPDS 592
           VD+NSAGFVYLRFE S+SAM+AQ ALNGRWFAGKMIGATFMDI SYEAKFPDS
Sbjct: 541 VDRNSAGFVYLRFEKSESAMEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDS 592

[Close]

BLAST of Tan0001503 vs. ExPASy TrEMBL
Match: A0A6J1C6Q3 (RNA-binding protein 39 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007883 PE=4 SV=1)

HSP 1 Score: 978.8 bits (2529), Expect = 1.0e-281
Identity = 538/599 (89.82%), Postives = 563/599 (93.99%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKLKETANGGDAEIKSGDKHRSRSSKYKNDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQK+KETANGGDAE+KSGDKHRSRSSKYK+DGKDDGEHRSKRS
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHRSRSSKYKSDGKDDGEHRSKRS 60

Query: 61  KSEDGSRDHDRHRDRTSSRHRSRSRDRDRDRHRSSKEYRGKEDRERNREERSSKDRDADR 120
           KSED SRDHDRHRDRTSS+HRSRS+DRD DR RSSKEYR KED+ERNREERSSKDRD DR
Sbjct: 61  KSEDESRDHDRHRDRTSSQHRSRSKDRDXDRRRSSKEYREKEDKERNREERSSKDRDVDR 120

Query: 121 DKERVHDRD---RRGRDGERDKERERSRRSRSRSERHRSDRDESIRERRQDNEFREREKE 180
           D++R HDRD   RRGRDGERD+ERERSRRSRS SERH SDRDESIRER +DNEF+EREKE
Sbjct: 121 DRDRGHDRDRESRRGRDGERDRERERSRRSRSHSERHCSDRDESIRERSRDNEFKEREKE 180

Query: 181 RESRERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRD 240
           RE+RERGRDGRRYKEKKE+ AEPEADPERDQRTVFAYQI LKATERDVYEFFSRAGKVRD
Sbjct: 181 RETRERGRDGRRYKEKKEDGAEPEADPERDQRTVFAYQICLKATERDVYEFFSRAGKVRD 240

Query: 241 VRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAV 300
           VRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQ LL QPVMVKPSEAEKNQVQSTSA 
Sbjct: 241 VRLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQPLLGQPVMVKPSEAEKNQVQSTSAA 300

Query: 301 GGAGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFV 360
           GG GG MGPYSGGARRLYVGNLHP ITED +RQVFG+FGTVELVQMP+DE+GHCKGFGFV
Sbjct: 301 GGTGGAMGPYSGGARRLYVGNLHPEITEDMIRQVFGSFGTVELVQMPLDETGHCKGFGFV 360

Query: 361 QFTRLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGATTGDLDDEDGGGL-----S 420
           QFTRLEDARNALSLNGQLEI GR IKVSTVTDQPG+QDIGA TGDLDDEDGGGL     S
Sbjct: 361 QFTRLEDARNALSLNGQLEIGGRMIKVSTVTDQPGMQDIGANTGDLDDEDGGGLVKESSS 420

Query: 421 LNASSRASLMQKLDRTGTASSIAGSLGTHVVNNTGAALPIAPILGAATIPSLATSLATVP 480
           LNASSRASLMQKLDRTGTASSIAGSLGTHVVNNTGA LP+APILGAA+IPSL  SLAT+P
Sbjct: 421 LNASSRASLMQKLDRTGTASSIAGSLGTHVVNNTGATLPMAPILGAASIPSLVPSLATIP 480

Query: 481 TFPGLGAGIQLPTATANLLGVGSPSECLLLKNMFDPTAESEPNFDLDIRDDVEEECSRFG 540
            FPGLGAGIQ+PT TANLLGVG+PSECLLLKNMFDPTAESEPNFDLDIRDDVEEECSRFG
Sbjct: 481 AFPGLGAGIQVPTVTANLLGVGAPSECLLLKNMFDPTAESEPNFDLDIRDDVEEECSRFG 540

Query: 541 KLRHIYVDKNSAGFVYLRFENSQSAMDAQHALNGRWFAGKMIGATFMDISSYEAKFPDS 592
           KLRHI+VDKNSAGFVYLRFENSQSAM+AQ ALNGRWFAGKMIGATFMDI SYEAKFPDS
Sbjct: 541 KLRHIHVDKNSAGFVYLRFENSQSAMEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDS 599

[Close]

BLAST of Tan0001503 vs. ExPASy TrEMBL
Match: A0A1S3BIJ5 (RNA-binding protein 39 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490271 PE=4 SV=1)

HSP 1 Score: 976.9 bits (2524), Expect = 3.9e-281
Identity = 535/593 (90.22%), Postives = 560/593 (94.44%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKLKETANGGDAEIKSGDKHRSRSSKYKNDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQK+KETANGGD E+KSGDKH SRS KYK+DGKDDGEHRSKRS
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDGEMKSGDKHYSRSLKYKSDGKDDGEHRSKRS 60

Query: 61  KSEDGSRDHDRHRDRTSSRHRSRSRDRDRDRHRSSKEYRGKEDRERNREERSSKDRDADR 120
           KS+D SRD DRHRDRTSSRHRSRSR+RDRD+HRSSKE RGK+DRE NREERSSKDRD DR
Sbjct: 61  KSDDESRDRDRHRDRTSSRHRSRSRERDRDKHRSSKENRGKDDREGNREERSSKDRDVDR 120

Query: 121 DKERVHDRDRRGRDGERDKERERSRRSRSRSERHRSDRDESIRERRQDNEFREREKERES 180
           DKER HDRDRRGRDGER++ERERSRRSRSRSERHRSDRD+ IRER +DNE REREKERES
Sbjct: 121 DKERSHDRDRRGRDGERNRERERSRRSRSRSERHRSDRDDGIRERSRDNELREREKERES 180

Query: 181 RERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240
           RERGRDGRRYK+KK+EAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL
Sbjct: 181 RERGRDGRRYKDKKDEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240

Query: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAVGGA 300
           IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSA GG 
Sbjct: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGP 300

Query: 301 GGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFVQFT 360
           GG MGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMP+DESGHCKGFGF+QFT
Sbjct: 301 GGAMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPLDESGHCKGFGFIQFT 360

Query: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGATTGDLDDEDGGGLSLNASSRAS 420
           RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQD+GA+TGDLD+EDGGGLSLNASSRAS
Sbjct: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDVGASTGDLDEEDGGGLSLNASSRAS 420

Query: 421 LMQKLDRTGTASSIAGSLGTHVVNNTGAALPIAPILGAATIPSL--ATSLATVPTFPGLG 480
           LMQKLDRTG ASSIAGSLGTHVVNNTGA +P APILG ATIPSL   TSLA  P FPGLG
Sbjct: 421 LMQKLDRTGAASSIAGSLGTHVVNNTGATMP-APILGGATIPSLGVGTSLAAFPAFPGLG 480

Query: 481 AGIQLPTATANLLGVGSPSECLLLKNMFDPTAESEPNFDLDIRDDVEEECSRFGKLRHIY 540
           AG+Q+P  TANLLGVG+PSECLLLKNMFDPTAESEP FDLDIRDDVEEECSRFGKL+HIY
Sbjct: 481 AGVQVPPVTANLLGVGTPSECLLLKNMFDPTAESEPTFDLDIRDDVEEECSRFGKLKHIY 540

Query: 541 VDKNSAGFVYLRFENSQSAMDAQHALNGRWFAGKMIGATFMDISSYEAKFPDS 592
           VDKNSAGFVYLRFE  +SA +AQ ALNGRWFAGKMIGATFMDI SYEAKFPDS
Sbjct: 541 VDKNSAGFVYLRFEKPESATEAQRALNGRWFAGKMIGATFMDIPSYEAKFPDS 592

[Close]

BLAST of Tan0001503 vs. ExPASy TrEMBL
Match: A0A6J1HYU3 (RNA-binding protein 39 OS=Cucurbita maxima OX=3661 GN=LOC111468152 PE=4 SV=1)

HSP 1 Score: 974.5 bits (2518), Expect = 1.9e-280
Identity = 532/594 (89.56%), Postives = 560/594 (94.28%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKLKETANGGDAEIKSGDKHRSRSSKYKNDGKDDGEHRSKRS 60
           MDFDEYDYLEKTVENPEGQK+KETANGGDAE+KSGDKHRSRSSKYK DGKDDGEHRSKRS
Sbjct: 1   MDFDEYDYLEKTVENPEGQKVKETANGGDAEMKSGDKHRSRSSKYKTDGKDDGEHRSKRS 60

Query: 61  KSEDGSRDHDRHRDRTSSRHRSRSRDRDRDRHRSSKEYRGKEDRERNREERSSKDRDADR 120
           KSED S DHDRHRDRTSSRHRSRSRDRDRDRH S KE+RGKEDRE+N+EERSSKDRD DR
Sbjct: 61  KSEDESLDHDRHRDRTSSRHRSRSRDRDRDRHSSGKEFRGKEDREKNQEERSSKDRDVDR 120

Query: 121 DKERVHDRDRRGRDGERDKERERSRRSRSRSERHRSDRDESIRERRQDNEFREREKERES 180
           DKERVHD DRRGRDGE+D+ERERS RSRS SERHRSDRDES+R+R +DNEFREREKERES
Sbjct: 121 DKERVHDHDRRGRDGEKDRERERSHRSRSHSERHRSDRDESMRQRTRDNEFREREKERES 180

Query: 181 RERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRL 240
           RERGRDGRR+KEKKE+  EPEADPERDQRTVFAYQISLKATERDV+EFFSRAGKVRDVRL
Sbjct: 181 RERGRDGRRHKEKKEDGTEPEADPERDQRTVFAYQISLKATERDVFEFFSRAGKVRDVRL 240

Query: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAVGGA 300
           IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQ QSTSA  G 
Sbjct: 241 IMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQAQSTSAAAGP 300

Query: 301 GGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFVQFT 360
           GGVMGPY+GGARRLYVGNLHPNITEDNLRQVFGAFG VELVQMP+DESGHCKGFGF+QF+
Sbjct: 301 GGVMGPYTGGARRLYVGNLHPNITEDNLRQVFGAFGIVELVQMPLDESGHCKGFGFIQFS 360

Query: 361 RLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDIGATTGDLDDEDGGGLSLNASSRAS 420
           RLEDARNALSLNGQLEIAGR IKVSTVTDQPGLQDIGA+TGDLDDEDG GLSLNASSRAS
Sbjct: 361 RLEDARNALSLNGQLEIAGRMIKVSTVTDQPGLQDIGASTGDLDDEDGVGLSLNASSRAS 420

Query: 421 LMQKLDRTGTASSIAGSLGTHVVNNTGAALPIAPILGAATIPSL--ATSLATVPTFPGLG 480
           LMQKLDRTGTASSIAGSLGTHVVNNTGA +P+APILG  TIPSL  ATSL +VP FPGLG
Sbjct: 421 LMQKLDRTGTASSIAGSLGTHVVNNTGATMPMAPILGVGTIPSLGVATSLVSVPAFPGLG 480

Query: 481 -AGIQLPTATANLLGVGSPSECLLLKNMFDPTAESEPNFDLDIRDDVEEECSRFGKLRHI 540
            AG+Q+PT  ANLLGVG+PSECLLLKNMFDPTAE EP FD+DIRDDVEEECSRFGKL+HI
Sbjct: 481 AAGVQVPTVAANLLGVGTPSECLLLKNMFDPTAELEPTFDMDIRDDVEEECSRFGKLKHI 540

Query: 541 YVDKNSAGFVYLRFENSQSAMDAQHALNGRWFAGKMIGATFMDISSYEAKFPDS 592
           YVDKNSAGFVYLRF NS++AMDAQ ALNGRWFAGKMIGATFMDI SYEAKFPDS
Sbjct: 541 YVDKNSAGFVYLRFANSEAAMDAQRALNGRWFAGKMIGATFMDIPSYEAKFPDS 594

[Close]

BLAST of Tan0001503 vs. TAIR 10
Match: AT2G16940.1 (Splicing factor, CC1-like )

HSP 1 Score: 611.7 bits (1576), Expect = 6.3e-175
Identity = 378/599 (63.11%), Postives = 454/599 (75.79%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKLKETAN-GGDAEIKSGDKHRSRSSKYKNDGKDDGEHRSKR 60
           MDFDEY+YLEKTVENP  +   E  N GGD ++KS  K RSRSS+++      G+ + +R
Sbjct: 1   MDFDEYEYLEKTVENPHLE--NEVGNGGGDEKVKSEGKERSRSSRHR------GDKKKER 60

Query: 61  SKSEDGSRDHDRHRDRTSSRHRSRSRDRDRDRHRSSKEYRGKE-DRERNREERSSKDRDA 120
            + EDG     R   R+ S HRSRSRDR+RDRHRSS+E+R ++ +++ ++EER+ KDR+ 
Sbjct: 61  DEDEDG-----RRSKRSRSHHRSRSRDRERDRHRSSREHRDRDREKDVDKEERNGKDRER 120

Query: 121 DRDKERVHDRDRRGRDGERDKERERSRRSRSRSERHRSDRDESIRERRQDNEFREREKER 180
           DRDK    DRD +GRD E+D    RSRRSRSRSERHRS      +ER +  E     KER
Sbjct: 121 DRDK----DRDSKGRDHEKD----RSRRSRSRSERHRS------QEREKSLEI--EPKER 180

Query: 181 ESRERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDV 240
           E+++R RD RR+K+KKE+  EPEADPERDQRTVFAYQI+L+ATERDVYEFFSRAGKVRDV
Sbjct: 181 ETKDRDRDRRRHKDKKEDKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDV 240

Query: 241 RLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAVG 300
           R+IMDR SRRS+G+GYVEF D MSVPMAIALSGQ LL QPVMVKPSEAEKN VQST+A  
Sbjct: 241 RIIMDRISRRSRGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAA 300

Query: 301 GAGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFVQ 360
           GAGG++GPYSGGARRLYVGNLH N++ED+LR+VF +FG+VELVQ+P DE+G CKGFGFVQ
Sbjct: 301 GAGGMLGPYSGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQ 360

Query: 361 FTRLEDARNALSLNGQLEIAGRTIKVSTVTDQPGLQDIG--ATTGDLDDEDGGGLSLNAS 420
           F RLEDARNAL+LNGQLEIAGR IKVS VTDQ  + + G   TTGDLDD+DGGGLSLNA 
Sbjct: 361 FARLEDARNALNLNGQLEIAGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQ 420

Query: 421 SRASLMQKLDRTGTASSIAGSLGTHVVNNTGAALPIAPILGAATIPSLATSLATVPTFPG 480
           SRA LMQKLDR+GTASS            TG     +   G +TI SLA       +FP 
Sbjct: 421 SRALLMQKLDRSGTASS------------TGLTTAASFNGGVSTISSLAAPALVQGSFPA 480

Query: 481 L----GAGIQLPTATANLLGVGSPSECLLLKNMFDPTAESEPNFDLDIRDDVEEECSRFG 540
           +    G+GI      A    +G PSECLLLKNMFDP+ E+E +FD DI++DV+EECS+FG
Sbjct: 481 VAGLAGSGIIPGVIPAGFDPIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFG 540

Query: 541 KLRHIYVDKNSAGFVYLRFENSQSAMDAQHALNGRWFAGKMIGATFMDISSYEAKFPDS 592
           KL HI+VDKNS GFVYLRFEN+Q+A+ AQ AL+GRWFAGKMI AT+M   +YEAKFP+S
Sbjct: 541 KLNHIFVDKNSVGFVYLRFENAQAAIGAQRALHGRWFAGKMITATYMTTEAYEAKFPES 558

[Close]

BLAST of Tan0001503 vs. TAIR 10
Match: AT2G16940.3 (Splicing factor, CC1-like )

HSP 1 Score: 587.8 bits (1514), Expect = 9.7e-168
Identity = 377/635 (59.37%), Postives = 454/635 (71.50%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKLKETAN-GGDAEIKSGDKHRSRSSKYKNDGKDDGEHRSKR 60
           MDFDEY+YLEKTVENP  +   E  N GGD ++KS  K RSRSS+++      G+ + +R
Sbjct: 1   MDFDEYEYLEKTVENPHLE--NEVGNGGGDEKVKSEGKERSRSSRHR------GDKKKER 60

Query: 61  SKSEDGSRDHDRHRDRTSSRHRSRSRDRDRDRHRSSKEYRGKE-DRERNREERSSKDRDA 120
            + EDG     R   R+ S HRSRSRDR+RDRHRSS+E+R ++ +++ ++EER+ KDR+ 
Sbjct: 61  DEDEDG-----RRSKRSRSHHRSRSRDRERDRHRSSREHRDRDREKDVDKEERNGKDRER 120

Query: 121 DRDKERVHDRDRRGRDGERDKERERSRRSRSRSERHRSDRDESIRERRQDNEFREREKER 180
           DRDK    DRD +GRD E+D    RSRRSRSRSERHRS      +ER +  E   +E+E 
Sbjct: 121 DRDK----DRDSKGRDHEKD----RSRRSRSRSERHRS------QEREKSLEIEPKERET 180

Query: 181 ESRERGR-----------------DGR----------RYKEKKEEAAEPEADPERDQRTV 240
           + R+R R                 DG           R+K+KKE+  EPEADPERDQRTV
Sbjct: 181 KDRDRDRRFILMLLGPLVLPSVQLDGALPCRDFSCFIRHKDKKEDKVEPEADPERDQRTV 240

Query: 241 FAYQISLKATERDVYEFFSRAGK---------VRDVRLIMDRNSRRSKGVGYVEFVDAMS 300
           FAYQI+L+ATERDVYEFFSRAGK         VRDVR+IMDR SRRS+G+GYVEF D MS
Sbjct: 241 FAYQIALRATERDVYEFFSRAGKVCPFLCRFHVRDVRIIMDRISRRSRGIGYVEFYDTMS 300

Query: 301 VPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAVGGAGGVMGPYSGGARRLYVGNLHPN 360
           VPMAIALSGQ LL QPVMVKPSEAEKN VQST+A  GAGG++GPYSGGARRLYVGNLH N
Sbjct: 301 VPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSGGARRLYVGNLHIN 360

Query: 361 ITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFVQFTRLEDARNALSLNGQLEIAGRTI 420
           ++ED+LR+VF +FG+VELVQ+P DE+G CKGFGFVQF RLEDARNAL+LNGQLEIAGR I
Sbjct: 361 MSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALNLNGQLEIAGRAI 420

Query: 421 KVSTVTDQPGLQDIG--ATTGDLDDEDGGGLSLNASSRASLMQKLDRTGTASSIAGSLGT 480
           KVS VTDQ  + + G   TTGDLDD+DGGGLSLNA SRA LMQKLDR+GTASS       
Sbjct: 421 KVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDRSGTASS------- 480

Query: 481 HVVNNTGAALPIAPILGAATIPSLATSLATVPTFPGL----GAGIQLPTATANLLGVGSP 540
                TG     +   G +TI SLA       +FP +    G+GI      A    +G P
Sbjct: 481 -----TGLTTAASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGIIPGVIPAGFDPIGVP 540

Query: 541 SECLLLKNMFDPTAESEPNFDLDIRDDVEEECSRFGKLRHIYVDKNSAGFVYLRFENSQS 592
           SECLLLKNMFDP+ E+E +FD DI++DV+EECS+FGKL HI+VDKNS GFVYLRFEN+Q+
Sbjct: 541 SECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSVGFVYLRFENAQA 596

[Close]

BLAST of Tan0001503 vs. TAIR 10
Match: AT2G16940.2 (Splicing factor, CC1-like )

HSP 1 Score: 585.9 bits (1509), Expect = 3.7e-167
Identity = 374/640 (58.44%), Postives = 457/640 (71.41%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKLKETAN-GGDAEIKSGDKHRSRSSKYKNDGKDDGEHRSKR 60
           MDFDEY+YLEKTVENP  +   E  N GGD ++KS  K RSRSS+++      G+ + +R
Sbjct: 1   MDFDEYEYLEKTVENPHLE--NEVGNGGGDEKVKSEGKERSRSSRHR------GDKKKER 60

Query: 61  SKSEDGSRDHDRHRDRTSSRHRSRSRDRDRDRHRSSKEYRGKE-DRERNREERSSKDRDA 120
            + EDG     R   R+ S HRSRSRDR+RDRHRSS+E+R ++ +++ ++EER+ KDR+ 
Sbjct: 61  DEDEDG-----RRSKRSRSHHRSRSRDRERDRHRSSREHRDRDREKDVDKEERNGKDRER 120

Query: 121 DRDKERVHDRDRRGRDGERDKERERSRRSRSRSERHRS-DRDESIRERRQDNEFREREKE 180
           DRDK    DRD +GRD E+D    RSRRSRSRSERHRS +R++S+    ++ E ++R+++
Sbjct: 121 DRDK----DRDSKGRDHEKD----RSRRSRSRSERHRSQEREKSLEIEPKERETKDRDRD 180

Query: 181 R-----------------------------------ESRERGRD-----GRRYKEKKEEA 240
           R                                   E   R         +R+K+KKE+ 
Sbjct: 181 RRYTSELVIDFIIYVHWYCLLYNLMGHVPFKIIIVIEGTSRASCVYAYWRKRHKDKKEDK 240

Query: 241 AEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYVEF 300
            EPEADPERDQRTVFAYQI+L+ATERDVYEFFSRAGKVRDVR+IMDR SRRS+G+GYVEF
Sbjct: 241 VEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEF 300

Query: 301 VDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAVGGAGGVMGPYSGGARRLYVG 360
            D MSVPMAIALSGQ LL QPVMVKPSEAEKN VQST+A  GAGG++GPYSGGARRLYVG
Sbjct: 301 YDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSGGARRLYVG 360

Query: 361 NLHPNITEDNLRQVFGAFGTVELVQMPVDESGHCKGFGFVQFTRLEDARNALSLNGQLEI 420
           NLH N++ED+LR+VF +FG+VELVQ+P DE+G CKGFGFVQF RLEDARNAL+LNGQLEI
Sbjct: 361 NLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALNLNGQLEI 420

Query: 421 AGRTIKVSTVTDQPGLQDIG--ATTGDLDDEDGGGLSLNASSRASLMQKLDRTGTASSIA 480
           AGR IKVS VTDQ  + + G   TTGDLDD+DGGGLSLNA SRA LMQKLDR+GTASS  
Sbjct: 421 AGRAIKVSAVTDQTEVPEAGQTQTTGDLDDDDGGGLSLNAQSRALLMQKLDRSGTASS-- 480

Query: 481 GSLGTHVVNNTGAALPIAPILGAATIPSLATSLATVPTFPGL----GAGIQLPTATANLL 540
                     TG     +   G +TI SLA       +FP +    G+GI      A   
Sbjct: 481 ----------TGLTTAASFNGGVSTISSLAAPALVQGSFPAVAGLAGSGIIPGVIPAGFD 540

Query: 541 GVGSPSECLLLKNMFDPTAESEPNFDLDIRDDVEEECSRFGKLRHIYVDKNSAGFVYLRF 592
            +G PSECLLLKNMFDP+ E+E +FD DI++DV+EECS+FGKL HI+VDKNS GFVYLRF
Sbjct: 541 PIGVPSECLLLKNMFDPSTETEDDFDEDIKEDVKEECSKFGKLNHIFVDKNSVGFVYLRF 600

[Close]

BLAST of Tan0001503 vs. TAIR 10
Match: AT5G09880.1 (Splicing factor, CC1-like )

HSP 1 Score: 473.0 bits (1216), Expect = 3.5e-133
Identity = 321/593 (54.13%), Postives = 390/593 (65.77%), Query Frame = 0


Query: 1   MDFDEYDYLEKTVENPEGQKLKETANGGDAEIKSGDKHRSRSSKYKNDGKDDG-EHRSKR 60
           M+FDEY+YLEKTVE   G   K+  +G +   +S  K      + +  G+++    RSK+
Sbjct: 1   MEFDEYEYLEKTVEEGAGSNKKKEESGNERSERSYRKREGGERQGEEGGEEERVSSRSKK 60

Query: 61  SKSEDGSRDHDRHRDRTSSRHRSRSRDRDRDRHRSSKEYRGKE-DRERNREERSSKDRDA 120
           S+  DG  +    RDR   RHRS SRD+DR+R +  +  R KE DRER+ +ER   DRD 
Sbjct: 61  SRG-DGEENGGGKRDRERERHRS-SRDKDRERDKVREGSRDKESDRERSSKERDRSDRDK 120

Query: 121 DRDKERVHDRDRRGRDGERDKERERSRRSRSRSERHRSDRDESIRERRQDNEFREREKER 180
            RD+ER                RER +RS SRS                    R  EKE 
Sbjct: 121 PRDRER----------------REREKRSSSRS--------------------RREEKEP 180

Query: 181 ESRERGRDGRRYKEKKEEAAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDV 240
           E  ERG   RR+++KK+   EPEADPERDQRTVFAYQ+ LKATERDVYEFFS+AGKVRDV
Sbjct: 181 EVVERG--SRRHRDKKD---EPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDV 240

Query: 241 RLIMDRNSRRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTS-AV 300
           RLIMDRNSRRSKGVGY+EF D MSVPMAIALSGQL L QPVMVKPSEAEKN  QS S  V
Sbjct: 241 RLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLFLGQPVMVKPSEAEKNLAQSNSTTV 300

Query: 301 GGAGGVMGPYSGGARRLYVGNLHPNITEDNLRQVFGAFGTVELVQMPVD-ESGHCKGFGF 360
           GG G          R+LYVGNLH N++E  LRQ+F AFG VELVQ+P+D E+G CKGFGF
Sbjct: 301 GGTG-------PADRKLYVGNLHFNMSELQLRQIFEAFGPVELVQLPLDPETGQCKGFGF 360

Query: 361 VQFTRLEDARNA-LSLNGQLEIAGRTIKVSTVTDQPGLQDIGATTGDLDDEDGGGLSLNA 420
           +QF +LE ++ A ++LNG+LEIAGRTIKVS+V+D  G QD    + D DD+DGGGL+LNA
Sbjct: 361 IQFVQLEHSKAAQIALNGKLEIAGRTIKVSSVSDHIGTQDSAPKSADFDDDDGGGLALNA 420

Query: 421 SSRASLMQKLDRTGTASSIAGSLGTHVVNNTGAALP-IAPILGAATIPSLATSLATVPTF 480
            SRA LMQKLDR+G A+SI GSLG   +N      P + P    + +P+ A     +P+F
Sbjct: 421 QSRAMLMQKLDRSGIATSIVGSLGVPGLNGAAFNQPGMNPSFPTSVLPTTA-----IPSF 480

Query: 481 PGLGAGIQLPTATANLLGVGSPSECLLLKNMFDPTAESEPNFDLDIRDDVEEECSRFGKL 540
                             VG PSECLLLKNMFDP  E+EPNFDL+IRDDV +ECS++G +
Sbjct: 481 VN--------------EHVGLPSECLLLKNMFDPATETEPNFDLEIRDDVADECSKYGPV 524

Query: 541 RHIYVDKNSAGFVYLRFENSQSAMDAQHALNGRWFAGKMIGATFMDISSYEAK 588
            HIYVDKNSAGFVYLRF++ ++A  AQ A++ RWFA KMI ATFM    YEAK
Sbjct: 541 NHIYVDKNSAGFVYLRFQSVEAAAAAQRAMHMRWFAQKMISATFMPPHEYEAK 524

The following BLAST results are available for this feature:

BLAST of Tan0001503 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5RC80	7.0e-62	37.92	RNA-binding protein 39 OS=Pongo abelii OX=9601 GN=RBM39 PE=2 SV=1	[more]
Q8VH51	7.7e-61	37.73	RNA-binding protein 39 OS=Mus musculus OX=10090 GN=Rbm39 PE=1 SV=2	[more]
Q14498	1.0e-60	37.73	RNA-binding protein 39 OS=Homo sapiens OX=9606 GN=RBM39 PE=1 SV=2	[more]
O13845	3.5e-37	30.20	RNA-binding protein rsd1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) ...	[more]
Q86U06	4.9e-31	36.24	Probable RNA-binding protein 23 OS=Homo sapiens OX=9606 GN=RBM23 PE=1 SV=1	[more]

BLAST of Tan0001503 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136109.1	2.9e-283	90.57	RNA-binding protein 39 isoform X2 [Momordica charantia]	[more]
XP_011658601.1	1.2e-281	90.39	RNA-binding protein 39 isoform X1 [Cucumis sativus] >XP_031744308.1 RNA-binding ...	[more]
XP_022136108.1	2.1e-281	89.82	RNA-binding protein 39 isoform X1 [Momordica charantia]	[more]
XP_008447936.1	8.0e-281	90.22	PREDICTED: RNA-binding protein 39 isoform X1 [Cucumis melo] >XP_016900486.1 PRED...	[more]
XP_022969035.1	4.0e-280	89.56	RNA-binding protein 39 [Cucurbita maxima] >XP_022969036.1 RNA-binding protein 39...	[more]

BLAST of Tan0001503 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C3C8	1.4e-283	90.57	RNA-binding protein 39 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007883...	[more]
A0A0A0K4Q5	6.0e-282	90.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014530 PE=4 SV=1	[more]
A0A6J1C6Q3	1.0e-281	89.82	RNA-binding protein 39 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007883...	[more]
A0A1S3BIJ5	3.9e-281	90.22	RNA-binding protein 39 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490271 PE=4 S...	[more]
A0A6J1HYU3	1.9e-280	89.56	RNA-binding protein 39 OS=Cucurbita maxima OX=3661 GN=LOC111468152 PE=4 SV=1	[more]

BLAST of Tan0001503 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16940.1	6.3e-175	63.11	Splicing factor, CC1-like	[more]
AT2G16940.3	9.7e-168	59.37	Splicing factor, CC1-like	[more]
AT2G16940.2	3.7e-167	58.44	Splicing factor, CC1-like	[more]
AT5G09880.1	3.5e-133	54.13	Splicing factor, CC1-like	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 313..385 e-value: 0.49 score: 17.3 coord: 499..577 e-value: 0.32 score: 19.3
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 210..282 e-value: 5.9E-16 score: 69.0 coord: 499..577 e-value: 1.2E-6 score: 38.1 coord: 313..385 e-value: 6.1E-24 score: 95.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 522..573 e-value: 3.4E-5 score: 23.6 coord: 314..383 e-value: 2.8E-20 score: 71.9 coord: 219..277 e-value: 2.3E-10 score: 40.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 312..389 score: 19.211941
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 209..286 score: 14.675204
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 498..581 score: 9.012812
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 494..592 e-value: 1.3E-30 score: 107.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 148..296 e-value: 6.4E-25 score: 89.9 coord: 305..392 e-value: 1.1E-23 score: 86.0
IPR029123	Splicing factor RBM39, linker	PFAM	PF15519	RBM39linker	coord: 403..515 e-value: 1.5E-20 score: 74.0
IPR006509	Splicing factor, RBM39-like	TIGRFAM	TIGR01622	TIGR01622	coord: 83..590 e-value: 3.2E-159 score: 529.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..206
None	No IPR available	PANTHER	PTHR48036	SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATED	coord: 1..588
None	No IPR available	PANTHER	PTHR48036:SF5	CC1-LIKE SPLICING FACTOR	coord: 1..588
None	No IPR available	CDD	cd12285	RRM3_RBM39_like	coord: 497..580 e-value: 2.44612E-38 score: 134.209
None	No IPR available	CDD	cd12283	RRM1_RBM39_like	coord: 210..282 e-value: 3.15764E-43 score: 146.982
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 202..310
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 312..578

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0001503.1	Tan0001503.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding