Tan0001493 (gene) Snake gourd v1

Overview


Name	Tan0001493
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Nuclear transcription factor Y subunit
Location	LG07: 12108676 .. 12122368 (+)
RNA-Seq Expression	Tan0001493
Synteny	Tan0001493

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGAAGACTAGCTGGAACTGAAGTCGGGTCCCGCAGTGGGTGAGGGAACAGTAGCCGTAGCTCTTGAATTTGAGTTGCCAAAATAAGGATCTTTGTTTTTGGCACTCTAATTTACACTGCTCTCAACTATGAGAATCGCTGAAGAACTCGATTGACTCTTCAATTTTTCTTCCTCTCTTTCTGTTTTTCTTTTTCCCCGAGATTCCGACCGTCTTCTTCCTCAATCTTGGCTTTCGGATTTCCTCAGTTTTCTCTCCAAGTGAGTTCGTCTCTTTCCTCTGACTTGATTTTGCAAGATTCTGCGTCTCTTTTCTCTTCTTTTCGTTTTATCTAATATTACTCTAGGGTTTTCTGAATTCGGTTCTTTTCCGGCTCCCCCACTTTTGGGTTTTTGTTTGTGTTCGAGTATTGTTCTCGTTGCATGGAATTGCGCCGGCTTGGGCTTCTGGATTCATGCGACTAGGATTTGGAATTTTGAATCAATCACTAGAGTGGAAGATTTCACTTGGTGGGTTTTCTTTGTTTAGAGAATGGTGTGGGATTGGGATCTTGATGGGGTTTTAGAAGTCACAAGTTTGGGCGATTTGTGCTTATATATTTTTAAAATTGAACTCGCGCCGTTGTATTTTGTTTTGCCCCTTCGAGTTTCTGTACAATCTATCCCATCTTTTTGGGCATTGGGTTCTGTTTGTTGTCTGCATGTGGGGATTATGGTTCGCGCACTTCTGAATTGGTGAATTTAGATTGTTTGAGTCAACTTGCGGCGCAGTCCTGAAAATTGTTTTAACTTGCGGCGCAGTCCTGAAAATTGTTTTTTCTGTTTTCTTGTTTAATTTACATGTCGTACAAATTACGTTGGAATGTCAGCCGTCTAAAAAAACAAGACGAATATTAAAGTGAACGTTATCTATAGAACTCTTTTTGTTACCCCTGCCCTTGCATGTGGATCATTGGTATGCTCAACTTAAATGCCAAAGAGAACTTATTTAGAGAGAGGAGAAGATTTTAATGCAAGATACTGAATTATGATTTGATAATTGGCTGGAGCGTTTAGGAGGATTCATCAATATCATCATGCAACTTATTCCCCTTTCGTTGTTTATATTTCTGAATTGCGGTTGGAAGAGTAATGGAGAAAGGTCGCCTATGATAATTTATAGTCTAGCATGGAAGTAAATGGAGCACCAATATAAGATAGGACGGTGGAAGTAGATAACAGATGTGGTTTCAAACCTGTTCATGGAAATAAATTGAGCTCCACTCAGCATTACAGGAATTGGTTTATGTTTTGAACTAAAGATTATGGATGATCTTGGTTTTCTGTTTTCGAGTTTGTTCCATATGCTACACTTATATCTCCTCAAAATTGAAAATTTAGGAGTTGCAAGTTGTGATTTAACTGACGTCAGTAAAACATTCACGATTCCAAAATTCTTCAAGCACAAAATAGAAACTTATTTGGTTTCTGTCTTCCGAATCATAGAACTCAACAATTGATGATAAGTAACCAGCTTAGCTTGGAAGATCTGAAGAAATTAAAGGTGTAGTTGAGGTGATAAGCCTCATTCAAGTGAATAATGCGCAGAGCACTGCGTGGATTGGATTTAGTTAAAGTATGCTCTGGGAAAGAGTTGGATAATCATAAATGGAAGGAAATAAAAAACATAGTTAATCGTTAAGGATGGCACTTGCTGCTGCTTGAGGTTAAGCTTTTCTTGGTGATCATCTCCCAGCCTTTCCCTGTATTTTCTCCCAGCCACCTGAATACTAAACCACCCTTCAGTCTGACAGAAAACTATTCCTTCCCTCCTTTGGGACCACTGAATTTAAGACTGTAAGCAAAACTGCTTCAGCTGGCTGTTGAATGTTCTTCCTTTTGATTTCCTTCTTTCACACGTGTTATTTAAACCTAAGGAATCAAACTATTTCCCATTTTTTCTTCAGGAAAGAATAACGGACTTGGAAGATCTCTGAAGGTTTTTTAAACGAATGATGCTTCCTTTTTCCTCTTTTACTTTTAACGCCTTCTTTTCAATGCTTTTATCATTGGGTGACGGCTGGTTCCTCTATTTATCCAACATTGGTTCTGCATGGTCTGTGTATTCTGTAGGCAATTTCATCCTTTTATCTCATCTAACGTATATTTTTGGTTAGAAGGTATGCAGTCAAAGTCTAAAAGTGTGAATCAACTACAATCTGAACCACCAAATATGCAGCAGACTAGTAGTTATTCTGAACCTTGGTGGCGTAGTATTGGGTACAATCCCATCTCCTCATCAGCAGCAGGAGGAAACGTGTCTAATTCACCATCACTGGAATGCCCTAATGGTGCTTCAGAATCAAATGATGGTCAGTCAATGTCAAATGATGATTTGAATGAAGAAGATGATGATGACAACACAAAAGATTCACAAGGTATGGCCCTCAATTAGGGTTTTTTGCTTGCTAAATCAATGCCATAGTTCAAACAAAGGAGCTTATTGTTTTTAGCCTTTTTAGTTATGAATTGGAACTATTGTACATTATCTTGGAAGCTGAGGACAGTATAACCTTATTGGCTTGTTGACAAACATGCTATTATCATTCAGCTGCAAGTTATGGGCAAGGACAGCAGATTGCTGTTTCTACTGCACCTACAGTGCATGGTGGATGTATCACACAGCCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGTGAGTTCCTTTGCTATAGTCTGATTGATTTCTTTCTTACTTTAGAGACATCATCCTTTTGACTCTCGGAATCCAGTATTTGAGTATTTAACAACATTGGTTTTTTGAAACACATGAGATTTAAGATGCTTTTAAATTTTGCTGGATTACTAGTTTTTGTTGCATCTTTTCCAGGCATGTGCATCAAACCCGTATCAGGATCCTTATTATGCTGGAGTGATGGCTGCCTATGGGCATCAACCTATGGTATGTAGGTTAAAATCATAAAAGATCAGGTGATGATATGAATACACACATATACGTATATGTTACTGGTAATTGTGCACCATGTACACTAATAATTAATAGATTGTGTATCATGTATATACCTTTTTAAATTAATAACCTTTTAATAAAAAAAGCATATTGATTAGATCAAAATTAAAAGTAACCAATAATTTTTGTTATCATGGGTAAGGATACTATTACTAACATAATAACCCCTATGTGTAATGCTGACATGAATAGAAAAAGGAATGGTTCGAATACCATCTACTAACATCACCGAAAACATTGTTTTTTTAGGTATATATGTTACCCCTGGGCAATTTTGATGGTACTTTTACTTCTTGCCTCCTTTTTCACTTTTTTTTTCCTTTGGCTTTACCTTTTCAATTATTCAGGAACTTCATTGTTGTTCCTTGTCCAGATTTCACTTTCTCAAACTATCTTAGGTAAAATTGCATGAGTATTTGGTGGACCAATGGAAAATTTCTAGTTTCTTGGAAGTGGTTGTAGCATGCTTATTGTAGTATCTGTGGCCGTAATTTTTTTATTTCCTTTTTCTTCTTAGCCACAACTAAAAGGTTATATGTCAAGGATGTCTGAGATCATTGTGGAATATTATCACTTTTTCCTTATACGTAAGAATTGAAGTTTGCCCCTGACAAGTACTTCTTATGGTAGGGTTATCCTCCTTTCCTTGGGATGCCACATGCAAGAATGGCTTTGCCCCTAGAGGTGACACAGGAGCCAGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTGATAAAAGTTAGAAAGGTACAACTGCTATTCAGAATTCAGATAGTCGTCTTTCATGTACTACAACTTGCCTCTTATACTTGTTAAGGTAGCTGGGAATCTAATTTCGTCTTTCTTAATTGTATTTTATTTTCAATGAAGTTCATTCTTCCCCATGCTGCAAATTTGATCAAAATTCTTTTACTGAGTAGTTTTTCCTCAAACTGTTTAATGACAATAAACATGTGAGTGAAGGGCAACTAAAAAATTATTTTGTTGTGCTGGACAGTGGAGTGGATGTACTCCCATAGGATTTTTAAAAATAGGTATAGCCTTTCCTTTTCTTTGGTGGTTTTCTTGGGAATATAACTTGATTTACCTATTCTACTTCTACCTCTGCATATGTTGGAAGTTTAGGGTATGCCAAATTGATTATATTCCAGCCACCCACATTGAAAAGGTTTGTATATTCTAATAATCAGATTCAGTTCAAGTGGGAAGAAACCTAAGTTTGGCTTACTGTAAGACCCCCAATTCTTAAGAAATATTCTAGAAGGGGTAAGAAAGTAATTATGTCGAGCAAATGAGGGACCACATGAGAGTGTGTGCTGTACGGGGTAGACAGGGTAGTGCGAGGCCTTTTTGTAGGGGAGCAGGAGGAGAGGAAGTTAGTTTTTGGTTTCGTTGGCATTTGCCTTGAGGAGGAGGGTACCAACCTCTCGAATAGCTGGAAGTTGTTTATCCGTGTTTTCTTTTGTAAGGAACCTCTGTGAATGGAAATAACCCCTTCTATGATTGAAGAACTCTCCTTCATCGATCTCGGATTCCCAAGGGGCCTTTTTAGCTGGCAGACAGATTTTGGATCAAGCATTAATTGCTAATGAGGCTATTGAGGATTATCGCACCATAAAACAAGAGGGTTTTCTTTATAAGATTGACTTTGAAAAAGCTTATGATCATGTTGATTGGAACTTCTTGGATAAGGTGTTGGCGAAAAAAGGGTTTGGTTTTAATTGGCGGTCTTGGATTTGGAGTTGTGTTAGGACTGTAGAGTATTCTGTCCTTGTTAATGGTAAACCTAGGAGGAGAATTCATGCCACTAGAGGCCTAAGACAAGGGGACCCTCTATCTCCCTTTCTTTTCCTGTTGGTGGTTGATAGTCTGAGTAGGATTATTTCTAAATGGGGGGAAGGAAATATTCTGGAAGGCTTTCGGGTTGGTAAGAATAAAGTGTCCCTTTCTCATCTTCAGTTTGCTGACGACACAATTTTCTTCTGTTCAGGAAAAGATGAGTCTTTCCATAACTTGATTAAGATTCTTGGTTTTTTTAGGCCATCTCGGGGCTTAGTATTAATAAAAGAAAATGTCAAGTTCTAGGCCTTAATTGTGAGCCCGAAAAGCTGGCAAGATGGCGAGATTGACACTTTTCCTACCTCCTATTTAGGGCTTCCTCTTGGTCATAATCCAAGGAGTTTACCTTTCTGGGACCCGGTTCTCCTTAAGATTCGTAAAAGACTGGCTTCTTGGAGACAAAGTTTCTTTTCTAAAGGCGGGAGACTAACTCTTATCCAATCTGTCTTGAGCGGTATCCCTACATACTTTTTGTCCCTTTTCAGAATCCTGGTCTCTGTTAGTAAGGGGATTGAGAAGCTTATGAGAGATTTTCTTTGGGAAGGGATAGATGAAGGTAAAGGTTCACATTTGGTGAATTGGGAGGTGATCTCCAAGCCTTTCCACTTAGGAGGTTTAGGGATTGGTAACGTGAAGGTTAGAAACAAGGCCCTTTTAGCTAAATGGATTTGGTGTTACTTTCAGGAACCTAATACCCTTTGGCACAGGATTATTGTTAGCAAGTTCGACCCTCATCCCTTTGAATGGACTTCTGGTGGGGTTCTCGGCACTTCCAGGAATCCTTGGAAAGAGATTGCGTTCGAGCTCCCTGCTTGTTCGCAATATGTTCGTTGTGCGGTGGGCGACGGGAGGGATACTTACTTTTGGGAAGATTAGTGGGTGGGGGAGAGACCTCTTTGCTCCCTCATTTATATCATCTGTCCTCTTTAAAAAACCACTCGATAACTTCGATTTGCTCTAGTCCTTCTGACTCTTTTTTCGATACTCCTTTTTCTTTTGGGTTTAGTTGGGCTTTGACCAATAGGGAAACGACTGACGTTATAGCTTTGTTGCCGTTGATTAATCAGTTTCAGCTCTACCCTCATCGGAGGGATTATCGCTTTTTGGATTCCTTCTCCCTCTAAAGGGTTTTCGTGCAGTTCCTTTTTTCACTGTTTGGTGAGTCCTGTCGCGTTGAGTGATTCTTCTTTCTCCTTTCTATGGAGGATGAAGGTTCCAAAGAAGGTAAAGTTTTTTGTTTGGCAGGTTTGGCACGAAAGGGTGAACACTGTGGATTGCTTGATGGCCAGGGGATCTCCCTTGATTGGGCCTTTCTGTTGTATTCTTTGCAGGAGGGAAAACGAGGAACTGGACCATATTCTTTGGAGATGCGACTTTGCCCAAGCTATTTGGAATTGTTTCTTTAAGCAATTCAACTTCTGCTTTGTTGGTCATTTTGATAGCAAAGAGACTTTCATGGAGCTTTTTCTCAATTCGCCTTTCCATGAGAAATGGTTGTTTTTGTGGCAGGGTGGGGTTTGTGCTATTTTGTGGTTTTTGTGGTGTGAGAGAAACAATAGAATCTTTAGGGGGAAAAGTCTTCTTATTTGGAAGTTTGGACCCTAGTTAGATTCTATGTTTCTCTTTGGGCATCTGTGTCAGGGTTCTTTTGTAATTATTCTCTAAGTCTTATTTTGCTTGATTGGAGCCCCTTTTTTTAGTTGGCTCCCCTCTTTTTTGTGGGCTTCTCTTTTTGTATGTCCGTGTATTCTTTCATTTTTATCTCAATGAAAGTTCGGTTTTCATCAAAAAAAAAAAAAAAAAGAGAGATTGAAGAACTCTCAATTACCAGAAGATTGGTTTCTTGTTATCTCTATTCCTGCTATTGTTGGAGTATTTTTCTTTGTTAGTTAACATTAAAGAGATAAATACCTAACAATTGGTTTCAGAGCCCGTTGACTTGGGGAAAACTAGGAAAATGGCTATGGAAGAGCGACTGAGGAATGGAGTTGGAGATGAAGGAACGATACAAAAAAATGGAGATGACAATGGAGAAAGGGTGGGATAAGGTGGCCACCGAAATGAGAGAGAACCAGAAAGCCTTGGTACTAATGTTAGCTGAAGCATCATCGGGGAAGAAGTTGGAAGGAAACCCTGAATCGAGTGGAACGAAGGCTAACCTGACAGACACGAAATGTTGGCTCCGAGCAACTTCGAGGACTCCAACTCTGCGTCGGAACGACGGATGGAAGGTAACACCGATCGAAGTAAGTATAACAAATTAGAAATGCCAGTGTTTACAGGTGAGAACCCTGATGCTTGGATGGTCAGAGCAGAAACATACTTTGAGGTGCATTAGCTGAGCGGTTGGGAGAAGATCAATGTTGCCATAGTAAGTTTCGACCCAGAGGTAATCGAATCGTATCGTTGGACAAATAATCAGAAAAAATAATTTCCTGGCTTGACGTGAGACAAAGGTTACTCCTGAGGCACCGTCCGCCGCGGGAGGGAAGCCTTTGTAGTCGTTTTTTATCCATTAAACAAGAATGCACTGTGCGATTATCGGAAGAAATTCGAGTCGTACTCAGGGCCATTACCGGATCTTGCGGAAAACATTCTGGAAAATACTTTTCTTAATGGGTTAACGTCGGTGATCAGAGCAGCGGTGATTAGTCGGAAACCGAAGAACTTGGAAGAGATCATGGAGCAGGCCCAACTCATCGAAGATAGGGAGATAGCCCTACAGTTGATTCGGGAAATTGGGCGATCCAACCCAAGAGAGGAGACAAAGAAATTGGGCCTGGGCCCATATGGGAAAGCTTCGACTAATGGAAGTAGTAAAGGTTTCTATCGAGCGAATGAAGGGCTGAGGCCCATTACCGTTCCAGAAAAAAGGGTCGGAGCGACAAACGACGACCCCGCGTAGACTGACGGACGTCGAATTCCAAATTAAGAGAGAAAAGGGCCTTTGTTTTAAATGTGATAAAAATACACCAGGGACCATAAATGTAAGAAAATTGAATTTCGAGAGTTGAGTGTGGTCTGAGAAAGTGAATTCGGGAGATGTTGAAGTGATCCAGGAGGTGCCGGAAGCTGAAGAAGAGTGGGTATTAGCTGAAATTGAGTTTAGGGCCATCGAAGTTGAATTGGTACAGTTGGATTTCAAATCGACGGTGGGATTTATGGTGCCAGAAACGATGAAGTTACATGGTTCCTTGAATGGCTTAGACGTGGTGATACTGATAGACAGTGGGGCCACTCACAATTTCATTTCGAAACATTTGGCATGAGATTTGAATCTATCCCGTGCTGAAACGGTGCCATTTGTTTCAGCACCATTTGGGATAGTTATGGGCAACAGGCAGATCATCCCAGGGGATGGAATATGCAGAAATGTTGAGTTAAAGATGAATGGTTTCACCTTCATCAATAATTTCTTACCGATTTAGTTAGGTGGGGTGGATATCATACTCGGTATGGAATGGTTGAGAACACGGGGGATAATAGAAGTGGATTGGAAGGGACTCACTCTGACCTTCTCTGCAAGGGATAACCAAGTCACTTTGAGAGGGGATCCTCTCTAACTAAATCGCAGGTGTCCTTTAAGATGATGATCAAGGAATGGAATGAGCACAACGAAGGTTACTTGATCGAGTTACAGGAGATGAATGCGGGGTCTCTCGGGGGGAAGTCGAATTGAGACAAGAAGGGCCGTCCCAAGAGTCCATGGTTGAGATTGAGTTATTGAAGGTCGAATACTGTGATTTACTCCTTCCCAGGGAAGAACTACCACCTCGTAGGGGGTAGACCACCAAATCAGTTTATTGGCAGGGAAAGGACCAGTGAACGTGAGACCTTATAAGTATGGCCATCGCCAGAAGAATGAGATCGAGAAAATGGTTAAAGAGATGTTAGACGTGGGAATCATTAGACCCAACACCAGTCTTTATTCGAGTCCAGTTTTACTAGTTAAGAAGAAGGATGGGGGATGGCATTTCTGTGTAGACTACTGGGTACTAAATGAAGTGTGACGATTCCTGATAAATTTCCGATACCCATGATCAAAGAACTTCTAGATGAACTCCACGAGTCCTCCATTTTTTCCAAGTTAGATTTGAAATCAGGGTATCACCAGATACGGATGAAAGAAGAAAATGTGGAGAAGACAACGTTACGTACGCACGCGGGCCACTATGAGTTTTTAGTGATGTCTTTCGGCCTTACCAACGCACCAACGACTTTCCAATCGTTAATGAACAAGGTATTCCGACCTTTCCTAAGACGTTTTGTGCTAGTTTTTTTTTTTATGATATATTGATTTGCAACCTTGATTACAAAACTCACTTAGTGCATTTGGAAATCGTTTTCAATGTTTTGCGAGAGAATAAACTCATTTTAAATTATGAGAAGAAGTGTGTCTTTGGGCGGAGGAAGGTAGAATATTTGGGTCATTGGATCTCAGGACAGGGGTGGAGGCCGATGTTGGGAAGATTTGGGCCATGATTAGTTGGTCGAAGCCTGAAACCCTAAAAGAATTACGAGGATTTTTGGGGCTAACTACTGGAGGTTTGTACAAAATTATGGGACTATCGCACGACCGTTACATCAGATGTTGAAAAAGAATGCATTTAAATGGAGTGAAGAATCTTTTGCAACCTTCGAGCAATTGACGAAGGCTATGACCACTATGCCTGTTTTAGCCTTACCAGATTTCTCCTTGCCTTTTACTATTGAGATTGATGCTTCGGGGTGGGGTTAGGAGTCATGTTGACTCAACAACAAAGACCAATAGCTTTCTTTAGCCAGGCCTTGTCGAAGAGAGCTAGGTTGAAATCAATGTATGAAAGAGAACTCATGGCAATAGTGTTTGTTGTTCAACATTGGCTTCATTACTACTGGGGCATAAATTCATTGGGTTACCGGATCAGAGGGCCTTACGAAACTTATTAGAACAGAGGGAGGTCCAACCAGAGTACCAAAAATGGCTTACCAAGCTGCTAGGATACAATTTCGAAATAAAGTATAAAGTAGGAATATTGAATAAAGAAGTTGATGCTCTGTCGAGGATGAGGCGAAGGGGTGAGTGTTCCATGCTCACAACACCAAAGATCATCGATGTTGAAACTATTATGCGAGAAGTGGAAAATGATGAGGAATTACAGGGGATTATAGCTGATTTAAACAGAGATCCATCCAACCATCCGAAATTCTTCTTGTTTCAAGGGCAATTGCGCTATAAAAATCGGTTAGTACTATCCCATCAATCTTGCCTCATTCTTGCTATTTTACAGATGTTTCATGACTCAGTGTTAGGGGGTCATTTGGGATTTCTAAGGACCTACAAGCATTTGACGGGAGATATTGGAAGGGCATGAAATAGAGTGTGAAACAGTATGTGGAGCAGTGTCCAATCTGTCAACGAAATAAGAATGAAGCTGTAGCTCCAGCTGGGTTACTCCAACCACTTCCCATTCCTGAAAGAATTTGGGAGGAAATGGGAATGGATTTCATAGAGGGGCTTCCTCGATCGAATGGGGTAGACTCCATATTAATGGTTAGGGGTGAGCAAAAAAAGATCGAAAACCGATACGACCGACTGAAACCGACCGAACCGAGGGCGATCGGTCGGTTTTGTAAAGGTTTCGGTCGGGGTCGGTTTTGGTCTTCACAAAACCGATCGGTCGGTCGGTCGACGACCGAACCGACCGAAAATTAAAAAAAAATATAATAATAATAATAATAATAATAATAATAATAATAATTAAAAAATAAAAAACTAAAAAATTTTCTCAAAATAATTAAATAATAATTATAAATTATTAAATAATAATTATAAATATTAAATAATTAATTAAATATATATATATAAACCGACCAAACCGACCGGTCGGTCGGTCGGTTTTGGTAAGGTTTTTCAAAAAAAAAAAAAAACTCCGACCGAACCGACCGCCCTTGGTCGGTTCGGAGGTCGGTTGGGGTCGAAAACCGACCCCGACCGACCGATGCTCACCCCTATTAATGGTAGTGTCAGACTCAGTAAATATGCCCATTTCATGACTCTCAAACATCCCTTTTCTGCAAAGGAGGTGGCAGCCCAATTAATGAAGGAGGTGGTATGATTGCACGGGTTTCCCAAATTGATTGTTTCAGATCGGGATGTTATTTTCATGAGTCACTCCTGGAAAGAGTTGTTTTGAATACAGGGTACTCAACTTAAAAGAAGTACAACTTTCCCTCCCCAAACGGATGGACAAACCGAAAGGGTGACCAGGTGCCTTGAAACGTATCTACGGCGTTTCTGTAACGAACAACCGAAACAGTGGATTAGTTGGGCTGTATTCTGGTACAACGCCAACTATCACGTCTCCCTTAACACTACCATTTCATGTCGTTTATGGTCGAGCACCTCCCCCTTTAGTCTCTTATGGTGAAAAGAAAACAACAAATAATACTCTAGAACAATAGTTGATGGACCGTGACAGGGCAATAGCAGCTCTCAAAGAACACTTAAGACTAGCCCAAGAGAGAATGAAAACGTATGCTGATCAACACCGAAGGGAAGTTGAATTCCAAGTGGGAGAAACAGTTTACTTAAAGTTGAGACCCTACAGGCAGCGATCGGTGGCCCAAAGGTGATGTGAGAAGCTTTCTCCCAAGTTTTATGGGCCATATGAGATAATGGAACGTATTGGCCAAGTTGCCTATAGATTGTTACTTCCTCCCACAGCAGCCATACATCCGGTGTTTCATATCTCTCCGCTTAAAAGGGTCGTAGGACAACATGAAGTAGTCCAATCAACCGGTCCAAAATTTTCTAATGCGTATGAATGGACCGAAAAACCAGCAACAGTGTTGGGAGCCCGTTGGAATGAAGATTGCCGTCATTGGGAATGCCTCATTCAGTGGGAAGGAATGACTTCAAATGAAGCAACTTGGGAAGGCTATCACGATATCTTGAAGAACTACCCAGAGTTTCACCTTGAGGACAAGGTGACTGTGGATCCCTGGGTTATTGTAAGACCCCACTCTTAAGAAATATTCTAGAAGGGGTAAGAAAGTAATTATGTCGAGCGAATTAGGGACCACATGAGAGTGTGTGCTGTACGGGGTAGACAGGGTAGTGCGAGGCCTTTTTGTAGGGGAGCAGGAGGAGAGGAAGTTAGTTTTTGGTTTCGTTGGCATTTGCCTTGAGGAGGAGGGTACCAGCCTCTCGAATAGCTGGAAGTTGTTTATCCTTGTTTTCTGTTGTAAGGAACCTCTGTGAATGGAAATAACCCCTTCTGTGATTGAAGAATGAGAAGATTGGGTTCTTGTTATCTCTATTCCTGCTATTGTTCGAGTATTTTTCTCTGTTTGTTAACGTTAAAGAGATAGATACCTAACAATTACACTTGCTATCAGGATTCTTGAGTGCTAAAATGAATATTGTTAGTACAAACACCTATATGAATTACCAAGTCATTGTTTCGAGACCTTACAAGACTGATATAAATATTCAAAGGAATGGCGTAACATGTAAGACTAGAGGTTGTCAACTGATGGTAAAATGATCATAAACCATCTCCATATTTACAGCTGATTTGCAAATCAAAGCTTTCAAGTTTTCAACTGAGTTTTTTTTTTCTAAAATATATATTTTACATTTCATGTTACGTGATGCGGTGACCATGTATGGTCGTCTCACTAATTTAAGTTGAATTCGACTGAGGCAAAGCTGGTCTTTCAAAATTTCACGTTCTCTTCTTGTCATACATAGTTCTTAGTAGTTAATTCATTACCCTTTAAGACAAATATGGCTTGGCTGACTCAAGAGTAGTTTTTGAACACTGCTATATTGGCCAGGGTTAGATTTCAAAAATCAAATGTCATTGAGGGTTGGCTGGTTGTTGGCTCTGTACGTTTGCGGAGTGATGATTGCTTTTTTCTTTTCTTTTTTTTCCGCCTGAACAAATCTTTTGCTATATGCAGGTATATATGTTTCTGAAGTATCTCTAATATTTAGCTTGTGTTTAATGTTTGATGTTCAACAGCCATATCTTCATGAATCTCGTCACCAGCATGCCATGAGACGGGCGAGGGGTAGTGGTGGACGTTTTGCCAAGAAAAATGAAGTTAACTCTTCGAGCTCTACTATGAAGAACAAGAAATCTGGTTCTGGTCAAGCTATGTCGTCGCAGTCTGCTAGTTCGTCTGGTTCTGAAGCTGTGCCTGGTGCCTTGGCTGAAACCTGGAATTCCTCCCATGGTCAACAAGAAGCAAGGCCCCAGTTGCATGAGGCATATGAAGCTCGTAGTTATGTGAATAGCAGTAGCCATTTTCATAACTACAGTAGCTTCCAAGCTTCGTCATATGGTTTACGCTCTGGTGAGAGAGGTGAAGATGGAGATTGTTCGGGACAGCAACGAGGAAGTATCTCAGAAAATCAGGCAGCACAGAGGCGTCTTGCCATCAAGTGAACCTCGTGGTCGCGAAAATATGGGGTACCCCTTGGTTGTCTGTGGGGCTACATTCCCTGGCAGTTTTTTCTGCCAGGCGGCAAATCATTCTTGGCTTTGTTCTGGTGCTTGTTGCTTAAACTAAACGTGTAAGGAGATGGATGATATAAGTTGGCCATTTGGACCTTAGTTCTAGTTAAGTCCTTGGATGCTTTATTCCATCAACCTCCCCCATTTTTACCTTGTGTATAGAACCAGACTCCATAGATTTCAAACAGTGTTCTTTTTAATTTCCAAACAACCTTGCTAACTATTATGTACTTGTGTGTGTGTGTGTGTCAAGGCTTGAAATGTGATCCATGATTTGGTTGCTAATCTTCA

mRNA sequence

GTGGAAGACTAGCTGGAACTGAAGTCGGGTCCCGCAGTGGGTGAGGGAACAGTAGCCGTAGCTCTTGAATTTGAGTTGCCAAAATAAGGATCTTTGTTTTTGGCACTCTAATTTACACTGCTCTCAACTATGAGAATCGCTGAAGAACTCGATTGACTCTTCAATTTTTCTTCCTCTCTTTCTGTTTTTCTTTTTCCCCGAGATTCCGACCGTCTTCTTCCTCAATCTTGGCTTTCGGATTTCCTCAGTTTTCTCTCCAAAAGGTATGCAGTCAAAGTCTAAAAGTGTGAATCAACTACAATCTGAACCACCAAATATGCAGCAGACTAGTAGTTATTCTGAACCTTGGTGGCGTAGTATTGGGTACAATCCCATCTCCTCATCAGCAGCAGGAGGAAACGTGTCTAATTCACCATCACTGGAATGCCCTAATGGTGCTTCAGAATCAAATGATGGTCAGTCAATGTCAAATGATGATTTGAATGAAGAAGATGATGATGACAACACAAAAGATTCACAAGCTGCAAGTTATGGGCAAGGACAGCAGATTGCTGTTTCTACTGCACCTACAGTGCATGGTGGATGTATCACACAGCCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCCGTATCAGGATCCTTATTATGCTGGAGTGATGGCTGCCTATGGGCATCAACCTATGGGTTATCCTCCTTTCCTTGGGATGCCACATGCAAGAATGGCTTTGCCCCTAGAGGTGACACAGGAGCCAGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTGATAAAAGTTAGAAAGCCATATCTTCATGAATCTCGTCACCAGCATGCCATGAGACGGGCGAGGGGTAGTGGTGGACGTTTTGCCAAGAAAAATGAAGTTAACTCTTCGAGCTCTACTATGAAGAACAAGAAATCTGGTTCTGGTCAAGCTATGTCGTCGCAGTCTGCTAGTTCGTCTGGTTCTGAAGCTGTGCCTGGTGCCTTGGCTGAAACCTGGAATTCCTCCCATGGTCAACAAGAAGCAAGGCCCCAGTTGCATGAGGCATATGAAGCTCGTAGTTATGTGAATAGCAGTAGCCATTTTCATAACTACAGTAGCTTCCAAGCTTCGTCATATGGTTTACGCTCTGGTGAGAGAGGTGAAGATGGAGATTGTTCGGGACAGCAACGAGGAAGTATCTCAGAAAATCAGGCAGCACAGAGGCGTCTTGCCATCAAGTGAACCTCGTGGTCGCGAAAATATGGGGTACCCCTTGGTTGTCTGTGGGGCTACATTCCCTGGCAGTTTTTTCTGCCAGGCGGCAAATCATTCTTGGCTTTGTTCTGGTGCTTGTTGCTTAAACTAAACGTGTAAGGAGATGGATGATATAAGTTGGCCATTTGGACCTTAGTTCTAGTTAAGTCCTTGGATGCTTTATTCCATCAACCTCCCCCATTTTTACCTTGTGTATAGAACCAGACTCCATAGATTTCAAACAGTGTTCTTTTTAATTTCCAAACAACCTTGCTAACTATTATGTACTTGTGTGTGTGTGTGTGTCAAGGCTTGAAATGTGATCCATGATTTGGTTGCTAATCTTCA

Coding sequence (CDS)

ATGCAGTCAAAGTCTAAAAGTGTGAATCAACTACAATCTGAACCACCAAATATGCAGCAGACTAGTAGTTATTCTGAACCTTGGTGGCGTAGTATTGGGTACAATCCCATCTCCTCATCAGCAGCAGGAGGAAACGTGTCTAATTCACCATCACTGGAATGCCCTAATGGTGCTTCAGAATCAAATGATGGTCAGTCAATGTCAAATGATGATTTGAATGAAGAAGATGATGATGACAACACAAAAGATTCACAAGCTGCAAGTTATGGGCAAGGACAGCAGATTGCTGTTTCTACTGCACCTACAGTGCATGGTGGATGTATCACACAGCCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCCGTATCAGGATCCTTATTATGCTGGAGTGATGGCTGCCTATGGGCATCAACCTATGGGTTATCCTCCTTTCCTTGGGATGCCACATGCAAGAATGGCTTTGCCCCTAGAGGTGACACAGGAGCCAGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTGATAAAAGTTAGAAAGCCATATCTTCATGAATCTCGTCACCAGCATGCCATGAGACGGGCGAGGGGTAGTGGTGGACGTTTTGCCAAGAAAAATGAAGTTAACTCTTCGAGCTCTACTATGAAGAACAAGAAATCTGGTTCTGGTCAAGCTATGTCGTCGCAGTCTGCTAGTTCGTCTGGTTCTGAAGCTGTGCCTGGTGCCTTGGCTGAAACCTGGAATTCCTCCCATGGTCAACAAGAAGCAAGGCCCCAGTTGCATGAGGCATATGAAGCTCGTAGTTATGTGAATAGCAGTAGCCATTTTCATAACTACAGTAGCTTCCAAGCTTCGTCATATGGTTTACGCTCTGGTGAGAGAGGTGAAGATGGAGATTGTTCGGGACAGCAACGAGGAAGTATCTCAGAAAATCAGGCAGCACAGAGGCGTCTTGCCATCAAGTGA

Protein sequence

MQSKSKSVNQLQSEPPNMQQTSSYSEPWWRSIGYNPISSSAAGGNVSNSPSLECPNGASESNDGQSMSNDDLNEEDDDDNTKDSQAASYGQGQQIAVSTAPTVHGGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKKSGSGQAMSSQSASSSGSEAVPGALAETWNSSHGQQEARPQLHEAYEARSYVNSSSHFHNYSSFQASSYGLRSGERGEDGDCSGQQRGSISENQAAQRRLAIK

Homology

[Close]

BLAST of Tan0001493 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.1e-55
Identity = 142/279 (50.90%), Postives = 179/279 (64.16%), Query Frame = 0


Query: 1   MQSKSKSVNQLQ-SEPPNMQQTSSYSEPWWRSIGYNPISSSAAGGNVSNSPSLECPNGAS 60
           MQSK    N+ + +    +QQ   Y+EPWW++  +  +  +   G  SNS SL+CPNG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGQSMSNDDLNEEDDDDNTKDSQAASYG--------QGQQIAVSTAPTVHGGCITQP 120
           ESND  S S D     ++D   KDSQAA+          +G   A+S    +H   + QP
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIR-NMHDQPLVQP 120

Query: 121 PQLELVGHSIACASNPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFV 180
           P  ELVGH IAC  NPYQDPYY G+M AYGHQ +G+ P+LGMP  R ALPL++ QEPV+V
Sbjct: 121 P--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYV 180

Query: 181 NAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSS 240
           NAKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+EV + 
Sbjct: 181 NAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA- 240

Query: 241 SSTMKNKKSGSGQAMSSQSASSSGSEAVPGALAETWNSS 271
                 + +G        + +SSGSE V     ET NSS
Sbjct: 241 -----GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of Tan0001493 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.7e-50
Identity = 160/346 (46.24%), Postives = 194/346 (56.07%), Query Frame = 0


Query: 1   MQSKSKS-VNQLQSEPPNMQQTSSYS-EPWWR-SIGYNPISSSAAGGNVSNSPSLECPNG 60
           M SKS S  N++ SE      +S  S  PW R +   N  SS  AG   S S +L     
Sbjct: 6   MHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIAL----- 65

Query: 61  ASESNDGQSMSN-DDLNEEDDDDNTKDSQAASYGQGQQIAVSTAPTVHGGCITQPPQLEL 120
           A ESN  +S SN D+   ++    T    A  Y    Q       ++H G    PP  +L
Sbjct: 66  ALESNGSKSPSNRDNTVNKESQVTTSPQSAGDYSDKNQ------ESLHHGITQPPPHPQL 125

Query: 121 VGHSIACA-SNPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQ 180
           VGH++  A SNPYQDPYYAGVM AYGH P+G+ P+ GMPH+RM LP E+ QEPVFVNAKQ
Sbjct: 126 VGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEPVFVNAKQ 185

Query: 181 YQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTM 240
           YQ ILRRRQARAKAE+E KLIK RKPYLHESRHQHAMRR RG+GGRFAKK    +S    
Sbjct: 186 YQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKTNTEASKRKA 245

Query: 241 KNKKSGSGQAMSSQSASSSGSEAVPGALAETWNSSHGQQEARPQLHEAYEARSYVNSSSH 300
           + K +G      +QS SSS S+       E WN  +      PQ  E             
Sbjct: 246 EEKSNGH----VTQSPSSSNSDQ-----GEAWNGDY----RTPQGDE------------- 303

Query: 301 FHNYSSFQASSYGLRSGERGEDGDCSGQQRGSISENQAAQRRLAIK 342
                  Q+S+Y     +R E+G+CSGQQ  S+S N  +Q RLAIK
Sbjct: 306 ------MQSSAY-----KRREEGECSGQQWNSLSSNHPSQARLAIK 303

[Close]

BLAST of Tan0001493 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.0e-21
Identity = 69/141 (48.94%), Postives = 90/141 (63.83%), Query Frame = 0


Query: 119 HSIACASNPYQDPYYAGVMAAYGHQPMG-YPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 178
           +S+A    PY DPYY  + A       G +   +G+    + LP +  +EPVFVNAKQY 
Sbjct: 51  NSMAPGQYPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYH 110

Query: 179 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF--AKKNEVNSSSSTM 238
           GILRRRQ+RA+ E +NK+IK RKPYLHESRH HA+RR RG GGRF  AKK + +   S+ 
Sbjct: 111 GILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHEDSSH 170

Query: 239 KNKKSGSGQAMSSQSASSSGS 257
           + K + S  A  S  A+SSG+
Sbjct: 171 EEKSNLS--AGKSAMAASSGT 189

[Close]

BLAST of Tan0001493 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.5e-21
Identity = 63/135 (46.67%), Postives = 81/135 (60.00%), Query Frame = 0


Query: 127 PYQDPYYAGVMAAYGHQPMGYP----PFLGMPHARMALPLEVTQEPVFVNAKQYQGILRR 186
           PY DPYY  V A   + P  YP      +GM    + L  +  +EPVFVNAKQY GILRR
Sbjct: 54  PYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRR 113

Query: 187 RQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKKSGS 246
           RQ+RAK E  N+ IK +KPY+HESRH HA+RR RG GGRF    + N      K ++  +
Sbjct: 114 RQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDH---KEEEEAT 173

Query: 247 GQAMSSQSASSSGSE 258
               +S+++SS  SE
Sbjct: 174 SDENTSEASSSLRSE 185

[Close]

BLAST of Tan0001493 vs. ExPASy Swiss-Prot
Match: Q9SYH4 (Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana OX=3702 GN=NFYA5 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.7e-20
Identity = 73/189 (38.62%), Postives = 105/189 (55.56%), Query Frame = 0


Query: 96  AVSTAPTVHGGCITQPPQLELVGHSIACAS----NPYQDPYYAGVMAAYGHQPMGYPPFL 155
           +++T+  V    +   P    +  S+ CA     N +  P YA    A  H  M     +
Sbjct: 107 SITTSSMVSQDSVFPAPTSGQISWSLQCAETSHFNGFLAPEYASTPTALPHLEM-----M 166

Query: 156 GMPHARMALPLEVTQ-EPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQH 215
           G+  +R+ LP  + + EP+FVNAKQY  ILRRR+ RAK E +NKLIK RKPYLHESRH H
Sbjct: 167 GLVSSRVPLPHHIQENEPIFVNAKQYHAILRRRKHRAKLEAQNKLIKCRKPYLHESRHLH 226

Query: 216 AMRRARGSGGRFAKKNEVNSSSSTMKNKKSGSGQAMSSQSASSSGSEAVPGALAETWNSS 275
           A++RARGSGGRF    ++  SS+++ + +  +GQ   S S    GS     +++ + NS+
Sbjct: 227 ALKRARGSGGRFLNTKKLQESSNSLCSSQMANGQNF-SMSPHGGGSGIGSSSISPSSNSN 286

Query: 276 HGQQEARPQ 280
                  PQ
Sbjct: 287 CINMFQNPQ 289

[Close]

BLAST of Tan0001493 vs. NCBI nr
Match: XP_022148721.1 (nuclear transcription factor Y subunit A-1-like [Momordica charantia] >XP_022148722.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia] >XP_022148723.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia] >XP_022148724.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia] >XP_022148725.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia] >XP_022148726.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia])

HSP 1 Score: 574.7 bits (1480), Expect = 5.3e-160
Identity = 309/344 (89.83%), Postives = 321/344 (93.31%), Query Frame = 0


Query: 1   MQSKSKSVNQLQSEPPNMQQTSSYSEPWWRSIGYNPISSSAAGGNVSNSPSLECPNGASE 60
           M SKSKSVNQL+SEPPNMQQT SYSEPWWRSIGYNPIS  AAGGNVSNS SLEC NGASE
Sbjct: 1   MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASE 60

Query: 61  SNDGQSMSNDDLNEEDDDDNTKDSQAASYGQGQ---QIAVSTAPTVHGGCITQPPQLELV 120
           SN+GQSMSNDDLNEEDDDDNTKDSQAASYGQ Q   Q AVSTAPTVHGGCITQPPQLELV
Sbjct: 61  SNEGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVSTAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180
           GH+IACASNPYQDPYY G+M AYGHQP+GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ
Sbjct: 121 GHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180

Query: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKN 240
           GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKK+EVNSS STMK+
Sbjct: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKD 240

Query: 241 KKSGSGQAMSSQSASSSGSEAVPGALAETWNSSHGQQEARPQLHEAYEARSYVNSSSHFH 300
           K+ GSGQA+SS SASSSGSEAVP  LAETWNSS+GQQEAR QLHE YEAR+YVN SSHF 
Sbjct: 241 KECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ 300

Query: 301 NYSSFQASSYGLRSGERGEDGDCSGQQRGSISENQAAQRRLAIK 342
           NYSSFQASSY LR+GERGEDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK 344

[Close]

BLAST of Tan0001493 vs. NCBI nr
Match: KAG6570399.1 (Nuclear transcription factor Y subunit A-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 567.8 bits (1462), Expect = 6.4e-158
Identity = 310/344 (90.12%), Postives = 318/344 (92.44%), Query Frame = 0


Query: 1   MQSKSKSVNQLQSEPPNMQQTSSYSEPWWRSIGYNPISSSAAGGNVSNSPSLECPNGASE 60
           MQSK +SVNQL+SEPPNMQQTSSYSEPWWRSIGYN ISS AAGGN+SNS SLECPNGASE
Sbjct: 76  MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISSPAAGGNLSNSTSLECPNGASE 135

Query: 61  SNDGQSMSNDDLNEEDDDDNTKDSQAASYGQGQ---QIAVSTAPTVHGGCITQPPQLELV 120
           SNDG SMSNDDLNE+DDDD TKDS+A SYGQ Q   Q AVS APTVHGGCITQPPQLELV
Sbjct: 136 SNDGPSMSNDDLNEDDDDDTTKDSRAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV 195

Query: 121 GHSIACASNPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180
           GHSIACASN YQDPYYAGVMAAYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ
Sbjct: 196 GHSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 255

Query: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKN 240
           GILRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKN
Sbjct: 256 GILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKN 315

Query: 241 KKSGSGQAMSSQSASSSGSEAVPGALAETWNSSHGQQEARPQLHEAYEARSYVNSSSHFH 300
           K SGSGQA SS SA SSGSEA P ALAETWNSS+GQQEAR QLHEAYEARSYVN S  FH
Sbjct: 316 KDSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSGQFH 375

Query: 301 NYSSFQASSYGLRSGERGEDGDCSGQQRGSISENQAAQRRLAIK 342
           NYSSFQASSY LRSGERG+DGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 376 NYSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 418

[Close]

BLAST of Tan0001493 vs. NCBI nr
Match: XP_022986703.1 (nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita maxima] >XP_022986704.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 565.8 bits (1457), Expect = 2.4e-157
Identity = 309/344 (89.83%), Postives = 317/344 (92.15%), Query Frame = 0


Query: 1   MQSKSKSVNQLQSEPPNMQQTSSYSEPWWRSIGYNPISSSAAGGNVSNSPSLECPNGASE 60
           MQSK +SVNQL+SEPPNMQQTSSYSEPWWRSIGYN ISS AAGGN+SNS SLECPNGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISSPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGQSMSNDDLNEEDDDDNTKDSQAASYGQGQ---QIAVSTAPTVHGGCITQPPQLELV 120
           SNDG SMSNDDLNE+DDDD TKDS A SYGQ Q   Q AVS APTVHGGCITQPPQLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNCQHAVSAAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180
           GHSIACASN YQDPYYAGVMAAYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180

Query: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKN 240
           GILRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSST+KN
Sbjct: 181 GILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTVKN 240

Query: 241 KKSGSGQAMSSQSASSSGSEAVPGALAETWNSSHGQQEARPQLHEAYEARSYVNSSSHFH 300
           K SGSGQA SS SA SSGSEA P ALAETWNSS+GQQEAR QLHEAYEARSYVN S  FH
Sbjct: 241 KDSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSGQFH 300

Query: 301 NYSSFQASSYGLRSGERGEDGDCSGQQRGSISENQAAQRRLAIK 342
           NYSSFQASSY LRSGERG+DGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 NYSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of Tan0001493 vs. NCBI nr
Match: KAG7010273.1 (Nuclear transcription factor Y subunit A-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 565.5 bits (1456), Expect = 3.2e-157
Identity = 309/344 (89.83%), Postives = 316/344 (91.86%), Query Frame = 0


Query: 1   MQSKSKSVNQLQSEPPNMQQTSSYSEPWWRSIGYNPISSSAAGGNVSNSPSLECPNGASE 60
           MQSK +SVNQL+SEPPNMQQTSSYSEPWWRSIGYN IS  AAGGN+SNS SLECPNGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGQSMSNDDLNEEDDDDNTKDSQAASYGQGQ---QIAVSTAPTVHGGCITQPPQLELV 120
           SNDG SMSNDDLNE+DDDD TKDS A SYGQ Q   Q AVS APTVHGGCITQPPQLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180
           GHSIACASN YQDPYYAGVMAAYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180

Query: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKN 240
           GILRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKN
Sbjct: 181 GILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKN 240

Query: 241 KKSGSGQAMSSQSASSSGSEAVPGALAETWNSSHGQQEARPQLHEAYEARSYVNSSSHFH 300
           K SGSGQA SS SA SSGSEA P ALAETWNSS+GQQEAR QLHEAYEARSYVN S  FH
Sbjct: 241 KDSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSGQFH 300

Query: 301 NYSSFQASSYGLRSGERGEDGDCSGQQRGSISENQAAQRRLAIK 342
           NYSSFQASSY LRSGERG+DGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 NYSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of Tan0001493 vs. NCBI nr
Match: XP_022944166.1 (nuclear transcription factor Y subunit A-1-like isoform X3 [Cucurbita moschata] >XP_022944167.1 nuclear transcription factor Y subunit A-1-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 564.3 bits (1453), Expect = 7.1e-157
Identity = 308/344 (89.53%), Postives = 316/344 (91.86%), Query Frame = 0


Query: 1   MQSKSKSVNQLQSEPPNMQQTSSYSEPWWRSIGYNPISSSAAGGNVSNSPSLECPNGASE 60
           MQSK +SVNQL+SEPPNMQQTSSYSEPWWRSIGYN IS  AAGGN+SNS SLECPNGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGQSMSNDDLNEEDDDDNTKDSQAASYGQGQ---QIAVSTAPTVHGGCITQPPQLELV 120
           SNDG SMSNDDLNE+DDDD TKDS A SYGQ Q   Q AVS APTVHGGCITQPPQLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180
           GHSIACASN YQDPYYAGVMAAYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180

Query: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKN 240
           GILRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKN
Sbjct: 181 GILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKN 240

Query: 241 KKSGSGQAMSSQSASSSGSEAVPGALAETWNSSHGQQEARPQLHEAYEARSYVNSSSHFH 300
           K SGSGQA SS SA SSGSEA P ALAETWNSS+GQQEAR QLHEAY+ARSYVN S  FH
Sbjct: 241 KDSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFH 300

Query: 301 NYSSFQASSYGLRSGERGEDGDCSGQQRGSISENQAAQRRLAIK 342
           NYSSFQASSY LRSGERG+DGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 NYSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of Tan0001493 vs. ExPASy TrEMBL
Match: A0A6J1D691 (Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC111017316 PE=3 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 2.5e-160
Identity = 309/344 (89.83%), Postives = 321/344 (93.31%), Query Frame = 0


Query: 1   MQSKSKSVNQLQSEPPNMQQTSSYSEPWWRSIGYNPISSSAAGGNVSNSPSLECPNGASE 60
           M SKSKSVNQL+SEPPNMQQT SYSEPWWRSIGYNPIS  AAGGNVSNS SLEC NGASE
Sbjct: 1   MHSKSKSVNQLESEPPNMQQTGSYSEPWWRSIGYNPISPPAAGGNVSNSTSLECTNGASE 60

Query: 61  SNDGQSMSNDDLNEEDDDDNTKDSQAASYGQGQ---QIAVSTAPTVHGGCITQPPQLELV 120
           SN+GQSMSNDDLNEEDDDDNTKDSQAASYGQ Q   Q AVSTAPTVHGGCITQPPQLELV
Sbjct: 61  SNEGQSMSNDDLNEEDDDDNTKDSQAASYGQEQHNTQRAVSTAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180
           GH+IACASNPYQDPYY G+M AYGHQP+GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ
Sbjct: 121 GHNIACASNPYQDPYYPGLMTAYGHQPLGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180

Query: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKN 240
           GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKK+EVNSS STMK+
Sbjct: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKSEVNSSCSTMKD 240

Query: 241 KKSGSGQAMSSQSASSSGSEAVPGALAETWNSSHGQQEARPQLHEAYEARSYVNSSSHFH 300
           K+ GSGQA+SS SASSSGSEAVP  LAETWNSS+GQQEAR QLHE YEAR+YVN SSHF 
Sbjct: 241 KECGSGQAISSHSASSSGSEAVPRVLAETWNSSNGQQEARTQLHETYEARTYVNGSSHFQ 300

Query: 301 NYSSFQASSYGLRSGERGEDGDCSGQQRGSISENQAAQRRLAIK 342
           NYSSFQASSY LR+GERGEDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 NYSSFQASSYALRTGERGEDGDCSGQQRGSISENQAAQRRLAIK 344

[Close]

BLAST of Tan0001493 vs. ExPASy TrEMBL
Match: A0A6J1JHB5 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111484375 PE=3 SV=1)

HSP 1 Score: 565.8 bits (1457), Expect = 1.2e-157
Identity = 309/344 (89.83%), Postives = 317/344 (92.15%), Query Frame = 0


Query: 1   MQSKSKSVNQLQSEPPNMQQTSSYSEPWWRSIGYNPISSSAAGGNVSNSPSLECPNGASE 60
           MQSK +SVNQL+SEPPNMQQTSSYSEPWWRSIGYN ISS AAGGN+SNS SLECPNGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISSPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGQSMSNDDLNEEDDDDNTKDSQAASYGQGQ---QIAVSTAPTVHGGCITQPPQLELV 120
           SNDG SMSNDDLNE+DDDD TKDS A SYGQ Q   Q AVS APTVHGGCITQPPQLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNCQHAVSAAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180
           GHSIACASN YQDPYYAGVMAAYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180

Query: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKN 240
           GILRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSST+KN
Sbjct: 181 GILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTVKN 240

Query: 241 KKSGSGQAMSSQSASSSGSEAVPGALAETWNSSHGQQEARPQLHEAYEARSYVNSSSHFH 300
           K SGSGQA SS SA SSGSEA P ALAETWNSS+GQQEAR QLHEAYEARSYVN S  FH
Sbjct: 241 KDSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSGQFH 300

Query: 301 NYSSFQASSYGLRSGERGEDGDCSGQQRGSISENQAAQRRLAIK 342
           NYSSFQASSY LRSGERG+DGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 NYSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of Tan0001493 vs. ExPASy TrEMBL
Match: A0A6J1FTP1 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111448699 PE=3 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 3.4e-157
Identity = 308/344 (89.53%), Postives = 316/344 (91.86%), Query Frame = 0


Query: 1   MQSKSKSVNQLQSEPPNMQQTSSYSEPWWRSIGYNPISSSAAGGNVSNSPSLECPNGASE 60
           MQSK +SVNQL+SEPPNMQQTSSYSEPWWRSIGYN IS  AAGGN+SNS SLECPNGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGQSMSNDDLNEEDDDDNTKDSQAASYGQGQ---QIAVSTAPTVHGGCITQPPQLELV 120
           SNDG SMSNDDLNE+DDDD TKDS A SYGQ Q   Q AVS APTVHGGCITQPPQLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180
           GHSIACASN YQDPYYAGVMAAYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180

Query: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKN 240
           GILRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKN
Sbjct: 181 GILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKN 240

Query: 241 KKSGSGQAMSSQSASSSGSEAVPGALAETWNSSHGQQEARPQLHEAYEARSYVNSSSHFH 300
           K SGSGQA SS SA SSGSEA P ALAETWNSS+GQQEAR QLHEAY+ARSYVN S  FH
Sbjct: 241 KDSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFH 300

Query: 301 NYSSFQASSYGLRSGERGEDGDCSGQQRGSISENQAAQRRLAIK 342
           NYSSFQASSY LRSGERG+DGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 NYSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of Tan0001493 vs. ExPASy TrEMBL
Match: A0A6J1FW74 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111448699 PE=3 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 3.8e-156
Identity = 306/342 (89.47%), Postives = 314/342 (91.81%), Query Frame = 0


Query: 3   SKSKSVNQLQSEPPNMQQTSSYSEPWWRSIGYNPISSSAAGGNVSNSPSLECPNGASESN 62
           SK +SVNQL+SEPPNMQQTSSYSEPWWRSIGYN IS  AAGGN+SNS SLECPNGASESN
Sbjct: 21  SKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASESN 80

Query: 63  DGQSMSNDDLNEEDDDDNTKDSQAASYGQGQ---QIAVSTAPTVHGGCITQPPQLELVGH 122
           DG SMSNDDLNE+DDDD TKDS A SYGQ Q   Q AVS APTVHGGCITQPPQLELVGH
Sbjct: 81  DGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELVGH 140

Query: 123 SIACASNPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 182
           SIACASN YQDPYYAGVMAAYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 141 SIACASNLYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 200

Query: 183 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKK 242
           LRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 
Sbjct: 201 LRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNKD 260

Query: 243 SGSGQAMSSQSASSSGSEAVPGALAETWNSSHGQQEARPQLHEAYEARSYVNSSSHFHNY 302
           SGSGQA SS SA SSGSEA P ALAETWNSS+GQQEAR QLHEAY+ARSYVN S  FHNY
Sbjct: 261 SGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHNY 320

Query: 303 SSFQASSYGLRSGERGEDGDCSGQQRGSISENQAAQRRLAIK 342
           SSFQASSY LRSGERG+DGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 321 SSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 361

[Close]

BLAST of Tan0001493 vs. ExPASy TrEMBL
Match: A0A6J1H3M1 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111459713 PE=3 SV=1)

HSP 1 Score: 560.5 bits (1443), Expect = 5.0e-156
Identity = 305/344 (88.66%), Postives = 319/344 (92.73%), Query Frame = 0


Query: 1   MQSKSKSVNQLQSEPPNMQQTSSYSEPWWRSIGYNPISSSAAGGNVSNSPSLECPNGASE 60
           MQSKSKSVNQ++SEPPNMQQT SYSEPWWRSIGYNPIS SA GGNVSNSPSLEC NGASE
Sbjct: 1   MQSKSKSVNQVESEPPNMQQTGSYSEPWWRSIGYNPISPSATGGNVSNSPSLECTNGASE 60

Query: 61  SNDGQSMSNDDLNEEDDDDNTKDSQAASYGQGQ---QIAVSTAPTVHGGCITQPPQLELV 120
           SND QSMSN DLNE+DDDD TK++QAASYGQGQ   Q AVSTAP VHGGCITQPPQLELV
Sbjct: 61  SND-QSMSNADLNEDDDDDTTKETQAASYGQGQHNNQHAVSTAPRVHGGCITQPPQLELV 120

Query: 121 GHSIACASNPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180
           GHSIACASN YQDPYYAG+MAAYGHQPMGYPPF+GMPHARMALPLEV QEPVFVNAKQYQ
Sbjct: 121 GHSIACASNQYQDPYYAGLMAAYGHQPMGYPPFIGMPHARMALPLEVAQEPVFVNAKQYQ 180

Query: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKN 240
           GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARG+GGRFAKKNE  S SSTMK+
Sbjct: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGTGGRFAKKNEAKSLSSTMKS 240

Query: 241 KKSGSGQAMSSQSASSSGSEAVPGALAETWNSSHGQQEARPQLHEAYEARSYVNSSSHFH 300
           K+SGSGQA+SS   SSSGSEAVPGALAETWNSS+ QQEAR QLHE+YEARSYVN +SHFH
Sbjct: 241 KESGSGQAISS---SSSGSEAVPGALAETWNSSNSQQEARAQLHESYEARSYVNGNSHFH 300

Query: 301 NYSSFQASSYGLRSGERGEDGDCSGQQRGSISENQAAQRRLAIK 342
           NYSSFQASSY L SGERGEDGDCSGQQRGSISENQAAQRRLAIK
Sbjct: 301 NYSSFQASSYALLSGERGEDGDCSGQQRGSISENQAAQRRLAIK 340

[Close]

BLAST of Tan0001493 vs. TAIR 10
Match: AT5G12840.2 (nuclear factor Y, subunit A1 )

HSP 1 Score: 218.0 bits (554), Expect = 1.2e-56
Identity = 142/278 (51.08%), Postives = 179/278 (64.39%), Query Frame = 0


Query: 1   MQSKSKSVNQLQ-SEPPNMQQTSSYSEPWWRSIGYNPISSSAAGGNVSNSPSLECPNGAS 60
           MQSK    N+ + +    +QQ   Y+EPWW++  +  +  +   G  SNS SL+CPNG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGQSMSNDDLNEEDDDDNTKDSQAASYG-------QGQQIAVSTAPTVHGGCITQPP 120
           ESND  S S D     ++D   KDSQAA+         +G   A+S    +H   + QPP
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSDNHGMEGNDPALSIR-NMHDQPLVQPP 120

Query: 121 QLELVGHSIACASNPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVN 180
             ELVGH IAC  NPYQDPYY G+M AYGHQ +G+ P+LGMP  R ALPL++ QEPV+VN
Sbjct: 121 --ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVN 180

Query: 181 AKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSS 240
           AKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+EV +  
Sbjct: 181 AKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA-- 240

Query: 241 STMKNKKSGSGQAMSSQSASSSGSEAVPGALAETWNSS 271
                + +G        + +SSGSE V     ET NSS
Sbjct: 241 ----GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 268

[Close]

BLAST of Tan0001493 vs. TAIR 10
Match: AT5G12840.4 (nuclear factor Y, subunit A1 )

HSP 1 Score: 218.0 bits (554), Expect = 1.2e-56
Identity = 142/278 (51.08%), Postives = 179/278 (64.39%), Query Frame = 0


Query: 1   MQSKSKSVNQLQ-SEPPNMQQTSSYSEPWWRSIGYNPISSSAAGGNVSNSPSLECPNGAS 60
           MQSK    N+ + +    +QQ   Y+EPWW++  +  +  +   G  SNS SL+CPNG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGQSMSNDDLNEEDDDDNTKDSQAASYG-------QGQQIAVSTAPTVHGGCITQPP 120
           ESND  S S D     ++D   KDSQAA+         +G   A+S    +H   + QPP
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSDNHGMEGNDPALSIR-NMHDQPLVQPP 120

Query: 121 QLELVGHSIACASNPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVN 180
             ELVGH IAC  NPYQDPYY G+M AYGHQ +G+ P+LGMP  R ALPL++ QEPV+VN
Sbjct: 121 --ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVN 180

Query: 181 AKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSS 240
           AKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+EV +  
Sbjct: 181 AKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA-- 240

Query: 241 STMKNKKSGSGQAMSSQSASSSGSEAVPGALAETWNSS 271
                + +G        + +SSGSE V     ET NSS
Sbjct: 241 ----GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 268

[Close]

BLAST of Tan0001493 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 217.6 bits (553), Expect = 1.5e-56
Identity = 142/279 (50.90%), Postives = 179/279 (64.16%), Query Frame = 0


Query: 1   MQSKSKSVNQLQ-SEPPNMQQTSSYSEPWWRSIGYNPISSSAAGGNVSNSPSLECPNGAS 60
           MQSK    N+ + +    +QQ   Y+EPWW++  +  +  +   G  SNS SL+CPNG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGQSMSNDDLNEEDDDDNTKDSQAASYG--------QGQQIAVSTAPTVHGGCITQP 120
           ESND  S S D     ++D   KDSQAA+          +G   A+S    +H   + QP
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIR-NMHDQPLVQP 120

Query: 121 PQLELVGHSIACASNPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFV 180
           P  ELVGH IAC  NPYQDPYY G+M AYGHQ +G+ P+LGMP  R ALPL++ QEPV+V
Sbjct: 121 P--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYV 180

Query: 181 NAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSS 240
           NAKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+EV + 
Sbjct: 181 NAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA- 240

Query: 241 SSTMKNKKSGSGQAMSSQSASSSGSEAVPGALAETWNSS 271
                 + +G        + +SSGSE V     ET NSS
Sbjct: 241 -----GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of Tan0001493 vs. TAIR 10
Match: AT5G12840.3 (nuclear factor Y, subunit A1 )

HSP 1 Score: 217.6 bits (553), Expect = 1.5e-56
Identity = 142/279 (50.90%), Postives = 179/279 (64.16%), Query Frame = 0


Query: 1   MQSKSKSVNQLQ-SEPPNMQQTSSYSEPWWRSIGYNPISSSAAGGNVSNSPSLECPNGAS 60
           MQSK    N+ + +    +QQ   Y+EPWW++  +  +  +   G  SNS SL+CPNG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGQSMSNDDLNEEDDDDNTKDSQAASYG--------QGQQIAVSTAPTVHGGCITQP 120
           ESND  S S D     ++D   KDSQAA+          +G   A+S    +H   + QP
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIR-NMHDQPLVQP 120

Query: 121 PQLELVGHSIACASNPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFV 180
           P  ELVGH IAC  NPYQDPYY G+M AYGHQ +G+ P+LGMP  R ALPL++ QEPV+V
Sbjct: 121 P--ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYV 180

Query: 181 NAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSS 240
           NAKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+EV + 
Sbjct: 181 NAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA- 240

Query: 241 SSTMKNKKSGSGQAMSSQSASSSGSEAVPGALAETWNSS 271
                 + +G        + +SSGSE V     ET NSS
Sbjct: 241 -----GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of Tan0001493 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 )

HSP 1 Score: 200.7 bits (509), Expect = 1.9e-51
Identity = 160/346 (46.24%), Postives = 194/346 (56.07%), Query Frame = 0


Query: 1   MQSKSKS-VNQLQSEPPNMQQTSSYS-EPWWR-SIGYNPISSSAAGGNVSNSPSLECPNG 60
           M SKS S  N++ SE      +S  S  PW R +   N  SS  AG   S S +L     
Sbjct: 6   MHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIAL----- 65

Query: 61  ASESNDGQSMSN-DDLNEEDDDDNTKDSQAASYGQGQQIAVSTAPTVHGGCITQPPQLEL 120
           A ESN  +S SN D+   ++    T    A  Y    Q       ++H G    PP  +L
Sbjct: 66  ALESNGSKSPSNRDNTVNKESQVTTSPQSAGDYSDKNQ------ESLHHGITQPPPHPQL 125

Query: 121 VGHSIACA-SNPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQ 180
           VGH++  A SNPYQDPYYAGVM AYGH P+G+ P+ GMPH+RM LP E+ QEPVFVNAKQ
Sbjct: 126 VGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEPVFVNAKQ 185

Query: 181 YQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTM 240
           YQ ILRRRQARAKAE+E KLIK RKPYLHESRHQHAMRR RG+GGRFAKK    +S    
Sbjct: 186 YQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKTNTEASKRKA 245

Query: 241 KNKKSGSGQAMSSQSASSSGSEAVPGALAETWNSSHGQQEARPQLHEAYEARSYVNSSSH 300
           + K +G      +QS SSS S+       E WN  +      PQ  E             
Sbjct: 246 EEKSNGH----VTQSPSSSNSDQ-----GEAWNGDY----RTPQGDE------------- 303

Query: 301 FHNYSSFQASSYGLRSGERGEDGDCSGQQRGSISENQAAQRRLAIK 342
                  Q+S+Y     +R E+G+CSGQQ  S+S N  +Q RLAIK
Sbjct: 306 ------MQSSAY-----KRREEGECSGQQWNSLSSNHPSQARLAIK 303

The following BLAST results are available for this feature:

BLAST of Tan0001493 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXV5	2.1e-55	50.90	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q945M9	2.7e-50	46.24	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84JP1	2.0e-21	48.94	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	3.5e-21	46.67	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9SYH4	1.7e-20	38.62	Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Tan0001493 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148721.1	5.3e-160	89.83	nuclear transcription factor Y subunit A-1-like [Momordica charantia] >XP_022148...	[more]
KAG6570399.1	6.4e-158	90.12	Nuclear transcription factor Y subunit A-1, partial [Cucurbita argyrosperma subs...	[more]
XP_022986703.1	2.4e-157	89.83	nuclear transcription factor Y subunit A-1-like isoform X1 [Cucurbita maxima] >X...	[more]
KAG7010273.1	3.2e-157	89.83	Nuclear transcription factor Y subunit A-1 [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022944166.1	7.1e-157	89.53	nuclear transcription factor Y subunit A-1-like isoform X3 [Cucurbita moschata] ...	[more]

BLAST of Tan0001493 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D691	2.5e-160	89.83	Nuclear transcription factor Y subunit OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1JHB5	1.2e-157	89.83	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114843...	[more]
A0A6J1FTP1	3.4e-157	89.53	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1FW74	3.8e-156	89.47	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1H3M1	5.0e-156	88.66	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of Tan0001493 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12840.2	1.2e-56	51.08	nuclear factor Y, subunit A1	[more]
AT5G12840.4	1.2e-56	51.08	nuclear factor Y, subunit A1	[more]
AT5G12840.1	1.5e-56	50.90	nuclear factor Y, subunit A1	[more]
AT5G12840.3	1.5e-56	50.90	nuclear factor Y, subunit A1	[more]
AT3G20910.1	1.9e-51	46.24	nuclear factor Y, subunit A9	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 168..190 score: 74.15 coord: 199..222 score: 81.94
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 164..225 e-value: 2.3E-35 score: 133.5
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 167..222 e-value: 1.9E-26 score: 92.4
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 31..332
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 165..225 score: 36.156738
None	No IPR available	GENE3D	6.10.250.2430		coord: 165..227 e-value: 3.0E-30 score: 106.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 308..341
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..260
None	No IPR available	PANTHER	PTHR12632:SF59	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9	coord: 31..332
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 170..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0001493.1	Tan0001493.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity