Tan0001463 (gene) Snake gourd v1

Overview


Name	Tan0001463
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein RALF-like 24
Location	LG10: 3919029 .. 3921995 (+)
RNA-Seq Expression	Tan0001463
Synteny	Tan0001463

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGTAGTTGACGTATGGATAACAATCAACTTCTGTTGATAGAGAAAGGTTTTGATTTTCCTTTCAAATTTATGGGTTTGTCTTTACTTTTGTTAAAACGGAGGCAAAAGCATTACTATTTCTGAACATCCAACCAATAAAGAATCTCACATTCAGAGCCCATATTGCTGGAGAAGAAGACGAAACAGTGAAAAAAAAGGCAGACAGAAACTTCAAAATGGCAAAACCCACTCTCTTCTTCCTTCTTTCCTTCCTCCTTCCACTTGTTTTCCTGCAAACCCATTTCTCATTCTGCGATGCGATTCTTGATCTCAGATCTTTGAAGGGCAGTGAAATCGATTTAATTCCTAAAGGGGTTTGCAATCAGAAGATCGGGGAGTGCCTTACTGAACCAGAAATGGAATCAGAAATCAGTAGGAGAGTTCTGATGATGCAGAAGAAGTATATAAGCTACGAAACGCTTAAGAGGGACATGGTTCCTTGCTCAAGACCAGGCGTTTCTTATTATGAATGCCATCCTGGTCCAGCAAATTCTTATGACAGAGGCTGCGAGGTCATTACCAGATGTGCTAGAGACGTGCACGACATAAACACTTGAAGATGATGCCACTGGTAAGGTGAGAATTGGATTTTGGGAATTTGTTTTTTTAAATGTGGGTTTATTTTATAATGGTACATTTGGGTTTTGATTGCTGCTGTGTTAATGTGTAGTGCATTGTTGATTTGTGGAGAGATCTGGGCTTTCCTATGGGGAAAACCTTGAGATTTGGTTGTGCTCTCTTGTTTTAAGGATTTTGTCTACTGGGGTCTGTGATTTTGTCTAGCAATCCTAAATTTGGCCAATAGGGTCTTCATATTTCTAATATTAACAGATTTCCTTCTCTTGCGCTTAGTTTTGTTCCTATGTTAGAGAGAAAGAAAAATGGAGAAAGGAGTGAAGAAAGCTTCTCTTCTCAGCTCTTTAGGTAAAGTAGTTACTTGTTTATGGAAACTAAGGAACTTGACTTGAAGTTATGATAAAGGTTGGGGTTGAGAAATGAAACCGGTGATCTTTAAATGTCAGAGGCTTTCATAACGTTGACTCTTTTCTGGGTGTGAAGTAATCCTAATTTATTATTAAAATAGTTAAACCTACTTAGTTGGAAAAGGGAAATATTGTTTTTTTGATCTTGACTCTAGTAGAAATCAACAAGTGCTTTCCCTCCTGGTTTCTTTTCTTCTCCTTGCACGTACACTTGCTTCATGTCTTTGAAGAAAATGTGGATTCATTGATGTAAAAAATATGAAAAGATGTGTGGGATATGGGGTGTGAATGTGAAGAACCAACTAGCTAGTATAGGAAAAAGTGCTAGAGAAGAACTAGTCATTTTCACAAAACCAAACCTTTTTTGAGAGTTGAGAGAGGAAGATATACTATAGGGCATATTTCTGTGAAATGTCTGAAGAATCAATAGCACCTCTTGTTGTAGAGTGTATATATCAAACTTAAGATATTGTCTTGGATTCAATTCCATAGATAGATATGGTGGTGGGTTTATCATTCTCTTCCAGCTTATTGAATCTGATTTTATCATATTTGGAAAGTTCTGGCTGTATATCAAGCATATTCATCAATATTATATATATATATATATATATATATATATATATATATTAATGATTTGAACTTGGGGGGTCCTCTACACCGTGATGTTTTAACAAATCTAGGATTAGAGATTTTCAAGTAGAGATTTTGTATTCAATATCTATGATTCTATGAACTCGAGGGTCTTTTTGTCACTATTTTCAATTAGGGCTACTGGTTGATGCCATAAATATAGGTTAAATTGCAAATTTGATCCCTATGGTTTGAAAAAAGTTACTCTAAAAAATAGTCTCTACATAAGGAATATTTATGAGGATTTTATCGAACCATAGGGACTAATTCTAACATTTAAAGCCATAAGGACTAAATTCTAACTTTCTAGGGAACAAATTTACAATTTAACCCATAAATATATTATTTTCTTAGTCAGAATTGTTTCTCTCCTTTGTGCATTATTTGTTAGCAGATCTATAAGACTTGTGTGTAAATGTGGTGCTCTGCTAAGTACAGTTCTGTAAAAAGCACCAGACTGATGTTCCAGTATAAACTCAAAATCACTTAAGCTATGATTTGATTTTCTTGCTTCATTATTGTTCTTTATCCTTTACAAATAACATTTGAACCATAATGCTCCACTCCCAAATTGGAAGTTACTTCTGAACATCTGTAAGTTAATTGTGGAGAACTGTATTTACTTAAACGAGTATGGACTTCTTATCCACCCTCTTACATATGATATTACTCAGTTAAAATTACCAATTGATCTTATTTTATTTTGATGTGATGTGAGAATATTTCATTTTGAATATATCTATATGGTAGTTGGATCTTATTTTAATAGCTTACTCAACTGGGTAAGGCACATACTCTCGATCAAAGTTTGGAGGTTTGAATTCTCACCTTCCCAAGTTGAACTCAAAAAAGAAAAGAAAGAATCTTATCCGATATCTACTTAACCTTCTCATCCCAGTTAATATATGCCTATGACTTGATTTCTGGAAGTCAATTTATTTTGGAAATACATTTTAGGCATTTTTTTTTTCTTGAATCATGATTTACTTGTATGTCCTTGCAACTTGATAATCTTAAATTAAATGTGATTGATTGTGAGGAATGTAATTTTACAGCAAGTTGCTGGCAGCCGTTCAGTTCAACTGTTGCGCCATAAGCAGACATCAACCAGAGGTTGTTGTTCATTGAGATTTGTGTGCTTTTGTAAAAAGTAGTGTTGAATATTATTATGATAACTTGAACAATTGAGTTATAACTTCATTTGAAATGGAATTTGCTTTTGAACAACACCACATATTCTAGTGGAGCATTTGGATCATTCCATTCACCTACTAAACGTTCTCAGCAACATTTCTTAGTGATGAATTTGGC

mRNA sequence

GAGTAGTTGACGTATGGATAACAATCAACTTCTGTTGATAGAGAAAGGTTTTGATTTTCCTTTCAAATTTATGGGTTTGTCTTTACTTTTGTTAAAACGGAGGCAAAAGCATTACTATTTCTGAACATCCAACCAATAAAGAATCTCACATTCAGAGCCCATATTGCTGGAGAAGAAGACGAAACAGTGAAAAAAAAGGCAGACAGAAACTTCAAAATGGCAAAACCCACTCTCTTCTTCCTTCTTTCCTTCCTCCTTCCACTTGTTTTCCTGCAAACCCATTTCTCATTCTGCGATGCGATTCTTGATCTCAGATCTTTGAAGGGCAGTGAAATCGATTTAATTCCTAAAGGGGTTTGCAATCAGAAGATCGGGGAGTGCCTTACTGAACCAGAAATGGAATCAGAAATCAGTAGGAGAGTTCTGATGATGCAGAAGAAGTATATAAGCTACGAAACGCTTAAGAGGGACATGGTTCCTTGCTCAAGACCAGGCGTTTCTTATTATGAATGCCATCCTGGTCCAGCAAATTCTTATGACAGAGGCTGCGAGGTCATTACCAGATGTGCTAGAGACGTGCACGACATAAACACTTGAAGATGATGCCACTGGTAAGCAAGTTGCTGGCAGCCGTTCAGTTCAACTGTTGCGCCATAAGCAGACATCAACCAGAGGTTGTTGTTCATTGAGATTTGTGTGCTTTTGTAAAAAGTAGTGTTGAATATTATTATGATAACTTGAACAATTGAGTTATAACTTCATTTGAAATGGAATTTGCTTTTGAACAACACCACATATTCTAGTGGAGCATTTGGATCATTCCATTCACCTACTAAACGTTCTCAGCAACATTTCTTAGTGATGAATTTGGC

Coding sequence (CDS)

ATGGCAAAACCCACTCTCTTCTTCCTTCTTTCCTTCCTCCTTCCACTTGTTTTCCTGCAAACCCATTTCTCATTCTGCGATGCGATTCTTGATCTCAGATCTTTGAAGGGCAGTGAAATCGATTTAATTCCTAAAGGGGTTTGCAATCAGAAGATCGGGGAGTGCCTTACTGAACCAGAAATGGAATCAGAAATCAGTAGGAGAGTTCTGATGATGCAGAAGAAGTATATAAGCTACGAAACGCTTAAGAGGGACATGGTTCCTTGCTCAAGACCAGGCGTTTCTTATTATGAATGCCATCCTGGTCCAGCAAATTCTTATGACAGAGGCTGCGAGGTCATTACCAGATGTGCTAGAGACGTGCACGACATAAACACTTGA

Protein sequence

MAKPTLFFLLSFLLPLVFLQTHFSFCDAILDLRSLKGSEIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQKKYISYETLKRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT

Homology

[Close]

BLAST of Tan0001463 vs. ExPASy Swiss-Prot
Match: Q9LK37 (Protein RALF-like 24 OS=Arabidopsis thaliana OX=3702 GN=RALFL24 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.5e-26
Identity = 65/113 (57.52%), Postives = 78/113 (69.03%), Query Frame = 0


Query: 14  LPLVFLQTHFSFCDAILDLRSLKGSEIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQ 73
           L L+ LQTH S     + + S+ G EID +     N  IGE   E  M SEISRRV+MM+
Sbjct: 10  LSLLCLQTHLSI-SVTVPIPSVNG-EIDAMLNR--NGVIGEEEGEEMMPSEISRRVMMMR 69

Query: 74  KKYISYETLKRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT 127
           K+YISYETL+RDMVPC +PG SYY C  G AN+Y+RGC VITRCARD +DI T
Sbjct: 70  KQYISYETLRRDMVPCQKPGASYYACRSGQANAYNRGCSVITRCARDTNDIKT 118

[Close]

BLAST of Tan0001463 vs. ExPASy Swiss-Prot
Match: Q2HIM9 (Protein RALF-like 31 OS=Arabidopsis thaliana OX=3702 GN=RALFL31 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 4.7e-24
Identity = 53/78 (67.95%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 49  NQKIGECLTEPEMESEISRRVLMMQKKYISYETLKRDMVPCSRPGVSYYECHPGPANSYD 108
           N  IGE   E  M +EISRRVLM QK+YI YETL+RDMVPC +PG SYY+C  G ANSY 
Sbjct: 38  NSIIGE--DEDLMPTEISRRVLMAQKRYIGYETLRRDMVPCQKPGASYYDCRSGQANSYS 97

Query: 109 RGCEVITRCARDVHDINT 127
           RGC+ ITRCARD +DINT
Sbjct: 98  RGCDTITRCARDTNDINT 113

[Close]

BLAST of Tan0001463 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.8e-15
Identity = 45/93 (48.39%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 37  GSEIDLIPKGV------CNQKIGECLTEP---EMESEISRRVLMMQKKYISYETLKRDMV 96
           G  +D +  G       C   I EC+ E    E +S+ISRR+L  QKKYISY  ++R+ V
Sbjct: 28  GDSLDFVRAGSSSLFSGCTGSIAECIAEEEEMEFDSDISRRIL-AQKKYISYGAMRRNSV 87

Query: 97  PCSRPGVSYYECHPG-PANSYDRGCEVITRCAR 120
           PCSR G SYY C  G  AN Y RGC  ITRC R
Sbjct: 88  PCSRRGASYYNCQRGAQANPYSRGCSTITRCRR 119

[Close]

BLAST of Tan0001463 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.0e-15
Identity = 42/76 (55.26%), Postives = 50/76 (65.79%), Query Frame = 0


Query: 46  GVCNQKIGECLTEP---EMESEISRRVLMMQKKYISYETLKRDMVPCSRPGVSYYECHPG 105
           G C   IGEC+ E    E++SE +RR+L   KKYISY  L+++ VPCSR G SYY C PG
Sbjct: 39  GGCKGSIGECIAEEEEFELDSESNRRIL-ATKKYISYGALQKNSVPCSRRGASYYNCKPG 98

Query: 106 -PANSYDRGCEVITRC 118
             AN Y RGC  ITRC
Sbjct: 99  AQANPYSRGCSAITRC 113

[Close]

BLAST of Tan0001463 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.0e-14
Identity = 50/111 (45.05%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 16  LVFLQTHFSFCDAILDLRSLKGSEIDLIP-KGVCNQKIGECL-----TEPEMESEISRRV 75
           +  L  HF F            S  D +P +  CN  I EC       E EM+SEI+RR+
Sbjct: 13  IAILTVHFLFAAV------TSQSSGDFVPIESKCNGTIAECSLSTAEEEFEMDSEINRRI 72

Query: 76  LMMQKKYISYETLKRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRCAR 120
           L    KYISY  L+R+ VPCSR G SYY C  G  AN Y RGC  ITRC R
Sbjct: 73  L-ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 116

[Close]

BLAST of Tan0001463 vs. NCBI nr
Match: XP_022974738.1 (protein RALF-like 24 [Cucurbita maxima])

HSP 1 Score: 249.6 bits (636), Expect = 1.4e-62
Identity = 116/126 (92.06%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 1   MAKPTLFFLLSFLLPLVFLQTHFSFCDAILDLRSLKGSEIDLIPKGVCNQKIGECLTEPE 60
           MAKPTLFFLLS LLPL+FLQTHF FCDA+LDLRSLKG++IDL+PKGVCNQKIGECLTEP+
Sbjct: 1   MAKPTLFFLLSILLPLIFLQTHFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTEPQ 60

Query: 61  MESEISRRVLMMQKKYISYETLKRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARD 120
           MESEISRRVLMMQK+YISYETL+RDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARD
Sbjct: 61  MESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARD 120

Query: 121 VHDINT 127
           VHDINT
Sbjct: 121 VHDINT 126

[Close]

BLAST of Tan0001463 vs. NCBI nr
Match: KAG6582492.1 (Protein RALF-like 24, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018876.1 Protein RALF-like 24, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 245.7 bits (626), Expect = 2.1e-61
Identity = 116/126 (92.06%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MAKPTLFFLLSFLLPLVFLQTHFSFCDAILDLRSLKGSEIDLIPKGVCNQKIGECLTEPE 60
           M  PTLFFL S LLPLVFLQTHFSFCDAILDLRSLKGSEID++ KGVCNQKIGECLTEPE
Sbjct: 1   MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPE 60

Query: 61  MESEISRRVLMMQKKYISYETLKRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARD 120
           MESE+SRRVLMMQKKYISY+TL+RDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARD
Sbjct: 61  MESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARD 120

Query: 121 VHDINT 127
           VHDINT
Sbjct: 121 VHDINT 126

[Close]

BLAST of Tan0001463 vs. NCBI nr
Match: XP_023526933.1 (protein RALF-like 24 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 245.7 bits (626), Expect = 2.1e-61
Identity = 116/126 (92.06%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MAKPTLFFLLSFLLPLVFLQTHFSFCDAILDLRSLKGSEIDLIPKGVCNQKIGECLTEPE 60
           M  PTLFFL S LLPLVFLQTHFSFCDAILDLRSLKGSEID++ KGVCNQKIGECLTEPE
Sbjct: 27  MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPE 86

Query: 61  MESEISRRVLMMQKKYISYETLKRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARD 120
           MESE+SRRVLMMQKKYISY+TL+RDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARD
Sbjct: 87  MESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARD 146

Query: 121 VHDINT 127
           VHDINT
Sbjct: 147 VHDINT 152

[Close]

BLAST of Tan0001463 vs. NCBI nr
Match: XP_038875978.1 (protein RALF-like 24 [Benincasa hispida] >XP_038875986.1 protein RALF-like 24 [Benincasa hispida] >XP_038875991.1 protein RALF-like 24 [Benincasa hispida] >XP_038876000.1 protein RALF-like 24 [Benincasa hispida] >XP_038876008.1 protein RALF-like 24 [Benincasa hispida])

HSP 1 Score: 242.3 bits (617), Expect = 2.3e-60
Identity = 114/126 (90.48%), Postives = 119/126 (94.44%), Query Frame = 0


Query: 1   MAKPTLFFLLSFLLPLVFLQTHFSFCDAILDLRSLKGSEIDLIPKGVCNQKIGECLTEPE 60
           MA P LFF  S LLPLVFLQTHFSFCDAILDLRS KGSE+DL+ KGVCNQKIGECLTEPE
Sbjct: 1   MANPILFFFFSILLPLVFLQTHFSFCDAILDLRSFKGSEMDLMAKGVCNQKIGECLTEPE 60

Query: 61  MESEISRRVLMMQKKYISYETLKRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARD 120
           MESEISRRVLMMQKKYISY+TL+RDMVPCSRPGVSYYECHPGPANSYDRGCE+ITRCARD
Sbjct: 61  MESEISRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEIITRCARD 120

Query: 121 VHDINT 127
           VHDINT
Sbjct: 121 VHDINT 126

[Close]

BLAST of Tan0001463 vs. NCBI nr
Match: XP_023539976.1 (protein RALF-like 31 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236.1 bits (601), Expect = 1.6e-58
Identity = 116/128 (90.62%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1   MAKP-TLFFLLS-FLLPLVFLQTHFSFCDAILDLRSLKGSEIDLIPKGVCNQKIGECLTE 60
           MAKP TLFFLLS  LLPL FLQT F FCDA+LDLRSLKG++IDL+PKGVCNQKIGECLTE
Sbjct: 1   MAKPTTLFFLLSILLLPLTFLQTLFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTE 60

Query: 61  PEMESEISRRVLMMQKKYISYETLKRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA 120
           PEMESEISRRVLMMQK+YISYETL+RDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA
Sbjct: 61  PEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA 120

Query: 121 RDVHDINT 127
           RDVHDINT
Sbjct: 121 RDVHDINT 128

[Close]

BLAST of Tan0001463 vs. ExPASy TrEMBL
Match: A0A6J1IH73 (protein RALF-like 24 OS=Cucurbita maxima OX=3661 GN=LOC111473473 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 6.9e-63
Identity = 116/126 (92.06%), Postives = 124/126 (98.41%), Query Frame = 0


Query: 1   MAKPTLFFLLSFLLPLVFLQTHFSFCDAILDLRSLKGSEIDLIPKGVCNQKIGECLTEPE 60
           MAKPTLFFLLS LLPL+FLQTHF FCDA+LDLRSLKG++IDL+PKGVCNQKIGECLTEP+
Sbjct: 1   MAKPTLFFLLSILLPLIFLQTHFPFCDAVLDLRSLKGNQIDLMPKGVCNQKIGECLTEPQ 60

Query: 61  MESEISRRVLMMQKKYISYETLKRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARD 120
           MESEISRRVLMMQK+YISYETL+RDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARD
Sbjct: 61  MESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARD 120

Query: 121 VHDINT 127
           VHDINT
Sbjct: 121 VHDINT 126

[Close]

BLAST of Tan0001463 vs. ExPASy TrEMBL
Match: A0A1S3AWQ1 (protein RALF-like 24 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483460 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 108/120 (90.00%), Postives = 115/120 (95.83%), Query Frame = 0


Query: 7   FFLLSFLLPLVFLQTHFSFCDAILDLRSLKGSEIDLIPKGVCNQKIGECLTEPEMESEIS 66
           FFL S + PLVFLQTHFSFCDAILDLRS KGSE+D++ KGVCNQKIGECLT+PEMESEIS
Sbjct: 9   FFLFSIIFPLVFLQTHFSFCDAILDLRSFKGSEMDVMAKGVCNQKIGECLTDPEMESEIS 68

Query: 67  RRVLMMQKKYISYETLKRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT 126
           RRVLMMQKKYISY+TL+RDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT
Sbjct: 69  RRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT 128

[Close]

BLAST of Tan0001463 vs. ExPASy TrEMBL
Match: A0A5D3CZU4 (Protein RALF-like 24 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002970 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 108/120 (90.00%), Postives = 115/120 (95.83%), Query Frame = 0


Query: 7   FFLLSFLLPLVFLQTHFSFCDAILDLRSLKGSEIDLIPKGVCNQKIGECLTEPEMESEIS 66
           FFL S + PLVFLQTHFSFCDAILDLRS KGSE+D++ KGVCNQKIGECLT+PEMESEIS
Sbjct: 9   FFLFSIIFPLVFLQTHFSFCDAILDLRSFKGSEMDVMAKGVCNQKIGECLTDPEMESEIS 68

Query: 67  RRVLMMQKKYISYETLKRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT 126
           RRVLMMQKKYISY+TL+RDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT
Sbjct: 69  RRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT 128

[Close]

BLAST of Tan0001463 vs. ExPASy TrEMBL
Match: A0A6J1G2H2 (protein RALF-like 24 OS=Cucurbita moschata OX=3662 GN=LOC111450186 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 114/128 (89.06%), Postives = 120/128 (93.75%), Query Frame = 0


Query: 1   MAKP-TLFFLLS-FLLPLVFLQTHFSFCDAILDLRSLKGSEIDLIPKGVCNQKIGECLTE 60
           MAKP TLFFLLS  LLPL FLQT F  CDA+LDLRSLKG++IDLIPKGVCNQKIGECLTE
Sbjct: 1   MAKPTTLFFLLSILLLPLTFLQTLFPLCDAVLDLRSLKGNQIDLIPKGVCNQKIGECLTE 60

Query: 61  PEMESEISRRVLMMQKKYISYETLKRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA 120
           PEMESEISRRVLMMQK+YISYETL+RDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA
Sbjct: 61  PEMESEISRRVLMMQKRYISYETLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCA 120

Query: 121 RDVHDINT 127
           RDVHD+ T
Sbjct: 121 RDVHDVKT 128

[Close]

BLAST of Tan0001463 vs. ExPASy TrEMBL
Match: A0A0A0L7V8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129640 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.0e-57
Identity = 108/121 (89.26%), Postives = 116/121 (95.87%), Query Frame = 0


Query: 6   LFFLLSFLLPLVFLQTHFSFCDAILDLRSLKGSEIDLIPKGVCNQKIGECLTEPEMESEI 65
           LFFL S + PLVFLQTHFSFCDAILDLRS KGSE++++ KGVCNQKIGECLT+PEMESEI
Sbjct: 7   LFFLFSIIFPLVFLQTHFSFCDAILDLRSFKGSEMEVMAKGVCNQKIGECLTDPEMESEI 66

Query: 66  SRRVLMMQKKYISYETLKRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDIN 125
           SRRVLMMQKKYISY+TL+RDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDIN
Sbjct: 67  SRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDIN 126

Query: 126 T 127
           T
Sbjct: 127 T 127

[Close]

BLAST of Tan0001463 vs. TAIR 10
Match: AT3G23805.1 (ralf-like 24 )

HSP 1 Score: 118.2 bits (295), Expect = 4.6e-27
Identity = 65/113 (57.52%), Postives = 78/113 (69.03%), Query Frame = 0


Query: 14  LPLVFLQTHFSFCDAILDLRSLKGSEIDLIPKGVCNQKIGECLTEPEMESEISRRVLMMQ 73
           L L+ LQTH S     + + S+ G EID +     N  IGE   E  M SEISRRV+MM+
Sbjct: 10  LSLLCLQTHLSI-SVTVPIPSVNG-EIDAMLNR--NGVIGEEEGEEMMPSEISRRVMMMR 69

Query: 74  KKYISYETLKRDMVPCSRPGVSYYECHPGPANSYDRGCEVITRCARDVHDINT 127
           K+YISYETL+RDMVPC +PG SYY C  G AN+Y+RGC VITRCARD +DI T
Sbjct: 70  KQYISYETLRRDMVPCQKPGASYYACRSGQANAYNRGCSVITRCARDTNDIKT 118

[Close]

BLAST of Tan0001463 vs. TAIR 10
Match: AT4G13950.1 (ralf-like 31 )

HSP 1 Score: 112.1 bits (279), Expect = 3.3e-25
Identity = 53/78 (67.95%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 49  NQKIGECLTEPEMESEISRRVLMMQKKYISYETLKRDMVPCSRPGVSYYECHPGPANSYD 108
           N  IGE   E  M +EISRRVLM QK+YI YETL+RDMVPC +PG SYY+C  G ANSY 
Sbjct: 38  NSIIGE--DEDLMPTEISRRVLMAQKRYIGYETLRRDMVPCQKPGASYYDCRSGQANSYS 97

Query: 109 RGCEVITRCARDVHDINT 127
           RGC+ ITRCARD +DINT
Sbjct: 98  RGCDTITRCARDTNDINT 113

[Close]

BLAST of Tan0001463 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 )

HSP 1 Score: 83.6 bits (205), Expect = 1.3e-16
Identity = 45/93 (48.39%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 37  GSEIDLIPKGV------CNQKIGECLTEP---EMESEISRRVLMMQKKYISYETLKRDMV 96
           G  +D +  G       C   I EC+ E    E +S+ISRR+L  QKKYISY  ++R+ V
Sbjct: 28  GDSLDFVRAGSSSLFSGCTGSIAECIAEEEEMEFDSDISRRIL-AQKKYISYGAMRRNSV 87

Query: 97  PCSRPGVSYYECHPG-PANSYDRGCEVITRCAR 120
           PCSR G SYY C  G  AN Y RGC  ITRC R
Sbjct: 88  PCSRRGASYYNCQRGAQANPYSRGCSTITRCRR 119

[Close]

BLAST of Tan0001463 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 80.1 bits (196), Expect = 1.4e-15
Identity = 50/111 (45.05%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 16  LVFLQTHFSFCDAILDLRSLKGSEIDLIP-KGVCNQKIGECL-----TEPEMESEISRRV 75
           +  L  HF F            S  D +P +  CN  I EC       E EM+SEI+RR+
Sbjct: 13  IAILTVHFLFAAV------TSQSSGDFVPIESKCNGTIAECSLSTAEEEFEMDSEINRRI 72

Query: 76  LMMQKKYISYETLKRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRCAR 120
           L    KYISY  L+R+ VPCSR G SYY C  G  AN Y RGC  ITRC R
Sbjct: 73  L-ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 116

[Close]

BLAST of Tan0001463 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 )

HSP 1 Score: 79.3 bits (194), Expect = 2.4e-15
Identity = 41/73 (56.16%), Postives = 49/73 (67.12%), Query Frame = 0


Query: 48  CNQKIGECL--TEPEMESEISRRVLMMQKKYISYETLKRDMVPCSRPGVSYYECHPG-PA 107
           C+  I EC+   E EM+SEI+RR+L    KYISY++LKR+ VPCSR G SYY C  G  A
Sbjct: 47  CHGSIAECIGAEEEEMDSEINRRIL-ATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQA 106

Query: 108 NSYDRGCEVITRC 118
           N Y RGC  I RC
Sbjct: 107 NPYSRGCSKIARC 118

The following BLAST results are available for this feature:

BLAST of Tan0001463 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LK37	6.5e-26	57.52	Protein RALF-like 24 OS=Arabidopsis thaliana OX=3702 GN=RALFL24 PE=3 SV=1	[more]
Q2HIM9	4.7e-24	67.95	Protein RALF-like 31 OS=Arabidopsis thaliana OX=3702 GN=RALFL31 PE=3 SV=1	[more]
Q9MA62	1.8e-15	48.39	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]
Q945T0	3.0e-15	55.26	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q8L9P8	2.0e-14	45.05	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]

BLAST of Tan0001463 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022974738.1	1.4e-62	92.06	protein RALF-like 24 [Cucurbita maxima]	[more]
KAG6582492.1	2.1e-61	92.06	Protein RALF-like 24, partial [Cucurbita argyrosperma subsp. sororia] >KAG701887...	[more]
XP_023526933.1	2.1e-61	92.06	protein RALF-like 24 [Cucurbita pepo subsp. pepo]	[more]
XP_038875978.1	2.3e-60	90.48	protein RALF-like 24 [Benincasa hispida] >XP_038875986.1 protein RALF-like 24 [B...	[more]
XP_023539976.1	1.6e-58	90.63	protein RALF-like 31 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0001463 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IH73	6.9e-63	92.06	protein RALF-like 24 OS=Cucurbita maxima OX=3661 GN=LOC111473473 PE=3 SV=1	[more]
A0A1S3AWQ1	1.1e-57	90.00	protein RALF-like 24 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483460 PE=3 SV=...	[more]
A0A5D3CZU4	1.1e-57	90.00	Protein RALF-like 24 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1G2H2	1.1e-57	89.06	protein RALF-like 24 OS=Cucurbita moschata OX=3662 GN=LOC111450186 PE=3 SV=1	[more]
A0A0A0L7V8	2.0e-57	89.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129640 PE=3 SV=1	[more]

BLAST of Tan0001463 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23805.1	4.6e-27	57.52	ralf-like 24	[more]
AT4G13950.1	3.3e-25	67.95	ralf-like 31	[more]
AT3G05490.1	1.3e-16	48.39	ralf-like 22	[more]
AT4G15800.1	1.4e-15	45.05	ralf-like 33	[more]
AT1G02900.1	2.4e-15	56.16	rapid alkalinization factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 58..119 e-value: 3.3E-28 score: 98.5
None	No IPR available	PANTHER	PTHR33136:SF36	PROTEIN RALF-LIKE 31	coord: 6..123
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 6..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0001463.1	Tan0001463.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
cellular_component	GO:0005576	extracellular region