Tan0001430 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAACTCCATCGAGGTTTGAAATTCTCTCGCTCCTTCGTTCTCTTCTTCGCACGTCGCGTCAATTCTCCGATTACAATATCAGAGAATACACCAAACGCCGCACCATTGATGCCTTCCAAGAAAATCAGATCCTCTCCGACCCTTCATTGATCTCCTCAGCCTACGCCGGCGGCAAAGCTCAGCTCGAGGTTGCGAAGCGGCAGGCCCTTGTTTACTCTCTTTACGCGCCTAAGGTCAAGAGTATCATGGATGTCGACCTCTGATCTCCATTTTTCTTTTTTATTCCTGCCTCTCATTTTGCTTTCTGGTAGGGTTTTTGGGACTCTATGAATTTGTTGTATTTGAGTTGAACTTTAAATTGGCATTCTGTTGTTATGAACAATGAGCAAAGTTCTTTCCATCGTATTCTGGAGTTTTCTTACGAGCTTAATTCGTCAATCCATGTAAAGCAGGAGTGTGAAACTAATATGCTTGGCTAAAGGAAAATTAGGGATTTTCGTTTTCAAATTTATCAAGCCTGAATCATATTGTGATGGATTTATGAATTTTCTGGGTTTTCAAATTTTTGTGCTTCTTAAGATCATCCATTGTAGAATTCCGTTTGAATACCAAAGATTACCAGACAAGACCCAGTATGAAGGTGAAGAAAGACAATGAGCCAAGTTCCTAATTTGTGATGTGAACAACGGACCCCGGACCTGAATTGATTTTACAAATCTCCGGCAACTTATTTGACTTGTTTATAGCTCATATCAGCTTGAAATTGAGTATGGAAAAAACACTTATTTGCTTAGATTATATTAGGAAAAGCTTTACATTTCAGTTTGACAGGAGCATGTAG ATGGCAACTCCATCGAGGTTTGAAATTCTCTCGCTCCTTCGTTCTCTTCTTCGCACGTCGCGTCAATTCTCCGATTACAATATCAGAGAATACACCAAACGCCGCACCATTGATGCCTTCCAAGAAAATCAGATCCTCTCCGACCCTTCATTGATCTCCTCAGCCTACGCCGGCGGCAAAGCTCAGCTCGAGGTTGCGAAGCGGCAGGCCCTTGTTTACTCTCTTTACGCGCCTAAGGTCAAGAGGATTTTCGTTTTCAAATTTATCAAGCCTGAATCATATTGTGATGGATTTATGAATTTTCTGGCTCATATCAGCTTGAAATTGAGTATGGAAAAAACACTTATTTGCTTAGATTATATTAGGAAAAGCTTTACATTTCAGTTTGACAGGAGCATGTAG ATGGCAACTCCATCGAGGTTTGAAATTCTCTCGCTCCTTCGTTCTCTTCTTCGCACGTCGCGTCAATTCTCCGATTACAATATCAGAGAATACACCAAACGCCGCACCATTGATGCCTTCCAAGAAAATCAGATCCTCTCCGACCCTTCATTGATCTCCTCAGCCTACGCCGGCGGCAAAGCTCAGCTCGAGGTTGCGAAGCGGCAGGCCCTTGTTTACTCTCTTTACGCGCCTAAGGTCAAGAGGATTTTCGTTTTCAAATTTATCAAGCCTGAATCATATTGTGATGGATTTATGAATTTTCTGGCTCATATCAGCTTGAAATTGAGTATGGAAAAAACACTTATTTGCTTAGATTATATTAGGAAAAGCTTTACATTTCAGTTTGACAGGAGCATGTAG MATPSRFEILSLLRSLLRTSRQFSDYNIREYTKRRTIDAFQENQILSDPSLISSAYAGGKAQLEVAKRQALVYSLYAPKVKRIFVFKFIKPESYCDGFMNFLAHISLKLSMEKTLICLDYIRKSFTFQFDRSM Homology
BLAST of Tan0001430 vs. ExPASy Swiss-Prot
Match: B5FZA8 (LYR motif-containing protein 4 OS=Taeniopygia guttata OX=59729 GN=LYRM4 PE=3 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 3.4e-09 Identity = 35/77 (45.45%), Postives = 47/77 (61.04%), Query Frame = 0
BLAST of Tan0001430 vs. ExPASy Swiss-Prot
Match: Q9HD34 (LYR motif-containing protein 4 OS=Homo sapiens OX=9606 GN=LYRM4 PE=1 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.7e-08 Identity = 34/77 (44.16%), Postives = 47/77 (61.04%), Query Frame = 0
BLAST of Tan0001430 vs. ExPASy Swiss-Prot
Match: Q8K215 (LYR motif-containing protein 4 OS=Mus musculus OX=10090 GN=Lyrm4 PE=1 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.9e-08 Identity = 32/77 (41.56%), Postives = 46/77 (59.74%), Query Frame = 0
BLAST of Tan0001430 vs. ExPASy Swiss-Prot
Match: Q0VCG0 (LYR motif-containing protein 4 OS=Bos taurus OX=9913 GN=LYRM4 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 4.2e-07 Identity = 30/77 (38.96%), Postives = 45/77 (58.44%), Query Frame = 0
BLAST of Tan0001430 vs. ExPASy Swiss-Prot
Match: Q6Q560 (Protein ISD11 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ISD11 PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.7e-06 Identity = 24/73 (32.88%), Postives = 44/73 (60.27%), Query Frame = 0
BLAST of Tan0001430 vs. NCBI nr
Match: XP_022137452.1 (LYR motif-containing protein 4 [Momordica charantia]) HSP 1 Score: 139.0 bits (349), Expect = 2.9e-29 Identity = 75/87 (86.21%), Postives = 78/87 (89.66%), Query Frame = 0
BLAST of Tan0001430 vs. NCBI nr
Match: XP_038894896.1 (LYR motif-containing protein 4 [Benincasa hispida]) HSP 1 Score: 137.5 bits (345), Expect = 8.4e-29 Identity = 73/83 (87.95%), Postives = 76/83 (91.57%), Query Frame = 0
BLAST of Tan0001430 vs. NCBI nr
Match: KAG6607477.1 (LYR motif-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037133.1 LYR motif-containing protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 136.3 bits (342), Expect = 1.9e-28 Identity = 72/83 (86.75%), Postives = 75/83 (90.36%), Query Frame = 0
BLAST of Tan0001430 vs. NCBI nr
Match: KGN64034.1 (hypothetical protein Csa_014098 [Cucumis sativus]) HSP 1 Score: 129.0 bits (323), Expect = 3.0e-26 Identity = 68/83 (81.93%), Postives = 73/83 (87.95%), Query Frame = 0
BLAST of Tan0001430 vs. NCBI nr
Match: KAF9626534.1 (hypothetical protein IFM89_034468 [Coptis chinensis]) HSP 1 Score: 122.9 bits (307), Expect = 2.1e-24 Identity = 62/83 (74.70%), Postives = 73/83 (87.95%), Query Frame = 0
BLAST of Tan0001430 vs. ExPASy TrEMBL
Match: A0A6J1C8A4 (LYR motif-containing protein 4 OS=Momordica charantia OX=3673 GN=LOC111008892 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 1.4e-29 Identity = 75/87 (86.21%), Postives = 78/87 (89.66%), Query Frame = 0
BLAST of Tan0001430 vs. ExPASy TrEMBL
Match: A0A0A0LST7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G039010 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.4e-26 Identity = 68/83 (81.93%), Postives = 73/83 (87.95%), Query Frame = 0
BLAST of Tan0001430 vs. ExPASy TrEMBL
Match: A0A1J6JR59 (Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_39690 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 1.0e-24 Identity = 60/83 (72.29%), Postives = 76/83 (91.57%), Query Frame = 0
BLAST of Tan0001430 vs. ExPASy TrEMBL
Match: A0A5A7UTC8 (LYR motif-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002810 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.8e-24 Identity = 63/83 (75.90%), Postives = 70/83 (84.34%), Query Frame = 0
BLAST of Tan0001430 vs. ExPASy TrEMBL
Match: A0A1S3BV74 (LYR motif-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103494022 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.8e-24 Identity = 63/83 (75.90%), Postives = 70/83 (84.34%), Query Frame = 0
BLAST of Tan0001430 vs. TAIR 10
Match: AT5G61220.1 (LYR family of Fe/S cluster biogenesis protein ) HSP 1 Score: 87.4 bits (215), Expect = 9.3e-18 Identity = 47/83 (56.63%), Postives = 57/83 (68.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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