Tan0001400 (gene) Snake gourd v1

Overview


Name	Tan0001400
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Gibberellin regulated protein
Location	LG05: 70569691 .. 70571409 (-)
RNA-Seq Expression	Tan0001400
Synteny	Tan0001400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTGAAAAGCCATGGCGGTTCGTTTCCTTCTTCTTCTGGGAGTTTTCATCTTCCTTTGCCTTTCACAGGTAAATTTTCTCTCTTTTTAATTTCCACCAAATTTTCCAATTAACTCCAAGAAAATGTTTTCTTGGTAATCATTTTGATTTTTTTAAAAAAATAGATAATAAAATAATTGCGAGTGAAAGTAGTATTTATAAATTTAATTTAAAAAAAATTAAATGGTTAGGTAATAGAAACTTAAATTTCTTTTTACAGATATTTCTCTTCTTTTTTTTTAATAGAGAATGAGAAGTCTCTTTCTTCTCTCCCTCACTCTTTCGTGTTAGAAATTGCCCCTCAATTGGCAAGGACGAAGCATTGTTCTTGTTCTTGTGTTTGAAATTGTCCCTCGGTTTACAAGGAAGCATTGTTCATTTTTAGTGTAGTTTAACAATATTGCAAAGGACAGAGAACCAAAATCATCAAACATTTGGAATGATGATAGATAGTCGACTTATAATATTTTCTAAGTTAAGTTTGAATGGGCAGTGAAACATTATTCCACACAAATATAGTTTCAAAACAAATTCAAGAGACCAAGTATAATTTTTCTTTATCCTTTCTATTTGGAGCCCTGAAATCTGAGGGAGCGTTTGGAACACTGTATTAAGTTTTAGATGGTTTTGGAATCTAAATTTAAAACGTTGTTTGGGCCATATGTTCAAAATAATCTAATGGATTTGAAACATAACTCATGATTTTAAACAATGTACTCTAATTTCGCTAGTTTTCAAGCTTCAAACACTGTTTTTTTTAATTCTCGGAGTTTCATTTCGATTTCAAGCGTCTTGGGTTTCAAACCCCTCAAAATAAACTTCCACGATTTCGATTTCAAGCGTTCTGATTTCAAAACAGTGCTCTCCAAACGTCTCTTGAGATTCTGAAACCCATAGAGTTGATTGGCTTGATTTGGCTGGAATCTGAAACCCCAACTTAAGTTTTACTCATTGGATTTTTTTTAGTTCAACAATTGTGTAAGTGAGATATGAAATCTTAAGGCCCCATTTGATATTTGATATTTTTACTCTTTACATTTCTCTGCCATGAGGTTCATGTCCCTTGAGAAAGCATTTGAATTCTTACCCAAATTCTAAAAACAAAAACTTACCATTTCTTTTTACTTTTCAAAATATGGCTTGTTTTTGTAAAACATAAGTAAAAAGTAGATAACAAAACAAGTAAATTCATGTATGAGAGTAGTATTTATAGGTTGAATTTTCACAAACTAAAAACTAAAAATAAAAAAGCTATCAAACAAGAATGAATTAAAATAAGTCAATTAAGTATCTTTTCCATTAATTAAACTAGGTTGGATTTGACGCAGGTATCTTCTGATGGATACTCAGAAGAACAAGAAGAGATGGGAGAGTATGAGGAAGTGGTGAGAGGGCCAAACAGAAGGCTGATGCAGAACATAGGTGAGAAGTATATGAATATAATGAATGAAGAAATAGAGTTTAATTAGTGAATGTGTGAATTTTAATTAGCAGATTGTGGATGGGAGTGCAAGCGGCGGTGTGGGGCGCATTCGAGGCCGAAGCGGTGCGTAAGGGCGTGCGGGACGTGCTGCTTGCGGTGCAAGTGCGTGCCGCCGGGGACTTCAGGGAACCGTGAGATGTGCGGCACTTGCTACACCACCATGACCACACATGCCAACAAGACCAAGTGCCCTTAA

mRNA sequence

GTTTTGAAAAGCCATGGCGGTTCGTTTCCTTCTTCTTCTGGGAGTTTTCATCTTCCTTTGCCTTTCACAGGTATCTTCTGATGGATACTCAGAAGAACAAGAAGAGATGGGAGAGTATGAGGAAGTGGTGAGAGGGCCAAACAGAAGGCTGATGCAGAACATAGATTGTGGATGGGAGTGCAAGCGGCGGTGTGGGGCGCATTCGAGGCCGAAGCGGTGCGTAAGGGCGTGCGGGACGTGCTGCTTGCGGTGCAAGTGCGTGCCGCCGGGGACTTCAGGGAACCGTGAGATGTGCGGCACTTGCTACACCACCATGACCACACATGCCAACAAGACCAAGTGCCCTTAA

Coding sequence (CDS)

ATGGCGGTTCGTTTCCTTCTTCTTCTGGGAGTTTTCATCTTCCTTTGCCTTTCACAGGTATCTTCTGATGGATACTCAGAAGAACAAGAAGAGATGGGAGAGTATGAGGAAGTGGTGAGAGGGCCAAACAGAAGGCTGATGCAGAACATAGATTGTGGATGGGAGTGCAAGCGGCGGTGTGGGGCGCATTCGAGGCCGAAGCGGTGCGTAAGGGCGTGCGGGACGTGCTGCTTGCGGTGCAAGTGCGTGCCGCCGGGGACTTCAGGGAACCGTGAGATGTGCGGCACTTGCTACACCACCATGACCACACATGCCAACAAGACCAAGTGCCCTTAA

Protein sequence

MAVRFLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTKCP

Homology

[Close]

BLAST of Tan0001400 vs. ExPASy Swiss-Prot
Match: Q93X17 (Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.6e-18
Identity = 41/64 (64.06%), Postives = 45/64 (70.31%), Query Frame = 0


Query: 48  QNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANK 107
           + IDCG  C  RC   SRP+ C RACGTCC RC CVPPGTSGN E C  CY ++TTH NK
Sbjct: 42  KKIDCGGACAARCRLSSRPRLCNRACGTCCARCNCVPPGTSGNTETC-PCYASLTTHGNK 101

Query: 108 TKCP 112
            KCP
Sbjct: 102 RKCP 104

[Close]

BLAST of Tan0001400 vs. ExPASy Swiss-Prot
Match: Q9LFR3 (Gibberellin-regulated protein 14 OS=Arabidopsis thaliana OX=3702 GN=GASA14 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.2e-17
Identity = 39/62 (62.90%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 50  IDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTK 109
           IDC   C  RCG HSR   C+RAC TCC RCKCVPPGT GN+E CG+CY  M T   K+K
Sbjct: 214 IDCVPLCGTRCGQHSRKNVCMRACVTCCYRCKCVPPGTYGNKEKCGSCYANMKTRGGKSK 273

Query: 110 CP 112
           CP
Sbjct: 274 CP 275

[Close]

BLAST of Tan0001400 vs. ExPASy Swiss-Prot
Match: P46688 (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.2e-16
Identity = 48/111 (43.24%), Postives = 64/111 (57.66%), Query Frame = 0


Query: 1   MAVRFLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQNIDCGWECKRRC 60
           MAV    L+ + I +CL+      ++ +  ++G  E VV+         IDCG  CK RC
Sbjct: 1   MAVFRSTLVLLLIIVCLTTYELHVHAADGAKVG--EGVVK---------IDCGGRCKDRC 60

Query: 61  GAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTKCP 112
              SR K C+RAC +CC RC CVPPGTSGN  +C  CY ++TTH  + KCP
Sbjct: 61  SKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLC-PCYASITTHGGRLKCP 99

[Close]

BLAST of Tan0001400 vs. ExPASy Swiss-Prot
Match: P46687 (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.1e-16
Identity = 46/111 (41.44%), Postives = 62/111 (55.86%), Query Frame = 0


Query: 1   MAVRFLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQNIDCGWECKRRC 60
           MA+    L+ + I  CL+      ++ E  ++G  E VV+         IDCG  CK RC
Sbjct: 1   MAIFRSTLVLLLILFCLTTFELHVHAAEDSQVG--EGVVK---------IDCGGRCKGRC 60

Query: 61  GAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTKCP 112
              SRP  C+RAC +CC RC CVPPGT+GN  +C  CY ++TT   + KCP
Sbjct: 61  SKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLC-PCYASITTRGGRLKCP 99

[Close]

BLAST of Tan0001400 vs. ExPASy Swiss-Prot
Match: Q8GWK5 (Gibberellin-regulated protein 9 OS=Arabidopsis thaliana OX=3702 GN=GASA9 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-15
Identity = 48/114 (42.11%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 3   VRFLLLLGVFIFL--CLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQN---IDCGWECK 62
           V F+ L+  F+ L   L+++SS   +E        +E      +R   +   I+CG  C 
Sbjct: 7   VAFVTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACA 66

Query: 63  RRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTKCP 112
           RRC   SR K C RACG+CC +C+CVPPGTSGN   C  CY ++ TH NK KCP
Sbjct: 67  RRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASC-PCYASIRTHGNKLKCP 119

[Close]

BLAST of Tan0001400 vs. NCBI nr
Match: XP_008438104.1 (PREDICTED: snakin-2-like isoform X2 [Cucumis melo])

HSP 1 Score: 185.3 bits (469), Expect = 2.9e-43
Identity = 89/118 (75.42%), Postives = 99/118 (83.90%), Query Frame = 0


Query: 1   MAVR---FLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYE----EVVRGPNRRLMQNIDCG 60
           MAVR    LLLLGVF+FLCLSQ+SSDGY +++  M E E    +V+RG NRRLMQ IDCG
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCG 60

Query: 61  WECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTKCP 112
            ECKRRCGAHSRP RC+RACGTCC RC+CVPPGTSGNREMCGTCYT+MTTH NKTKCP
Sbjct: 61  GECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP 118

[Close]

BLAST of Tan0001400 vs. NCBI nr
Match: XP_038895055.1 (snakin-2-like [Benincasa hispida])

HSP 1 Score: 183.3 bits (464), Expect = 1.1e-42
Identity = 90/115 (78.26%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 1   MAVR---FLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEE-VVRGPNRRLMQNIDCGWEC 60
           MAVR    LLLLG+F+ L LSQVSSDGY EE     EY+E V+RG NRRLMQNI+CGWEC
Sbjct: 1   MAVRNFLLLLLLGLFVILSLSQVSSDGYPEEGMMEMEYDEKVMRGTNRRLMQNINCGWEC 60

Query: 61  KRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTKCP 112
           KRRCGAHSRP RC+RACGTCC RCKCVP GTSGNREMCGTCYT MTTH NKTKCP
Sbjct: 61  KRRCGAHSRPNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHGNKTKCP 115

[Close]

BLAST of Tan0001400 vs. NCBI nr
Match: KGN64291.1 (hypothetical protein Csa_013222 [Cucumis sativus])

HSP 1 Score: 181.8 bits (460), Expect = 3.2e-42
Identity = 87/115 (75.65%), Postives = 99/115 (86.09%), Query Frame = 0


Query: 1   MAVR---FLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEE-VVRGPNRRLMQNIDCGWEC 60
           MAVR    LLLLGVF+FLCLSQVSS+GY EE  +  EY+E ++RG NRRLMQ IDCG +C
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQC 60

Query: 61  KRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTKCP 112
           +RRCGAHSRP RC+RACGTCC RC+CVPPGTSGNREMCGTCYT+MTTH N+TKCP
Sbjct: 61  RRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNRTKCP 115

[Close]

BLAST of Tan0001400 vs. NCBI nr
Match: XP_008438094.1 (PREDICTED: snakin-2-like isoform X1 [Cucumis melo])

HSP 1 Score: 177.9 bits (450), Expect = 4.7e-41
Identity = 89/126 (70.63%), Postives = 99/126 (78.57%), Query Frame = 0


Query: 1   MAVR---FLLLLGVFIFLCLS--------QVSSDGYSEEQEEMGEYE----EVVRGPNRR 60
           MAVR    LLLLGVF+FLCLS        Q+SSDGY +++  M E E    +V+RG NRR
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQLRRTHITQISSDGYQDQEAGMKEMEYDEDQVMRGANRR 60

Query: 61  LMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHA 112
           LMQ IDCG ECKRRCGAHSRP RC+RACGTCC RC+CVPPGTSGNREMCGTCYT+MTTH 
Sbjct: 61  LMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHG 120

[Close]

BLAST of Tan0001400 vs. NCBI nr
Match: XP_022994681.1 (snakin-2-like [Cucurbita maxima])

HSP 1 Score: 165.2 bits (417), Expect = 3.1e-37
Identity = 81/116 (69.83%), Postives = 84/116 (72.41%), Query Frame = 0


Query: 1   MAVRFLLLLGVFIFLCLSQVS-----SDGYSEEQEEMGEYEEVVRGPNRRLMQNIDCGWE 60
           MA RFLLLLGV  FLCLS  S     S G+       G     VR PN R+M  IDCGWE
Sbjct: 1   MAARFLLLLGVLAFLCLSPASFLHGGSVGFDGNPGGGGGGGGTVRRPNERVMTKIDCGWE 60

Query: 61  CKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTKCP 112
           CKRRCGAHSRP RC+R CGTCCLRC CVPPGTSGNREMCGTCYT MTTH NKTKCP
Sbjct: 61  CKRRCGAHSRPNRCLRVCGTCCLRCNCVPPGTSGNREMCGTCYTGMTTHGNKTKCP 116

[Close]

BLAST of Tan0001400 vs. ExPASy TrEMBL
Match: A0A1S3AVJ9 (snakin-2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483303 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.4e-43
Identity = 89/118 (75.42%), Postives = 99/118 (83.90%), Query Frame = 0


Query: 1   MAVR---FLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYE----EVVRGPNRRLMQNIDCG 60
           MAVR    LLLLGVF+FLCLSQ+SSDGY +++  M E E    +V+RG NRRLMQ IDCG
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCG 60

Query: 61  WECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTKCP 112
            ECKRRCGAHSRP RC+RACGTCC RC+CVPPGTSGNREMCGTCYT+MTTH NKTKCP
Sbjct: 61  GECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP 118

[Close]

BLAST of Tan0001400 vs. ExPASy TrEMBL
Match: A0A0A0LW79 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045890 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.6e-42
Identity = 87/115 (75.65%), Postives = 99/115 (86.09%), Query Frame = 0


Query: 1   MAVR---FLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEE-VVRGPNRRLMQNIDCGWEC 60
           MAVR    LLLLGVF+FLCLSQVSS+GY EE  +  EY+E ++RG NRRLMQ IDCG +C
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQVSSNGYEEEGMKEMEYDEKMMRGANRRLMQYIDCGGQC 60

Query: 61  KRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTKCP 112
           +RRCGAHSRP RC+RACGTCC RC+CVPPGTSGNREMCGTCYT+MTTH N+TKCP
Sbjct: 61  RRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNRTKCP 115

[Close]

BLAST of Tan0001400 vs. ExPASy TrEMBL
Match: A0A1S3AW57 (snakin-2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483303 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.3e-41
Identity = 89/126 (70.63%), Postives = 99/126 (78.57%), Query Frame = 0


Query: 1   MAVR---FLLLLGVFIFLCLS--------QVSSDGYSEEQEEMGEYE----EVVRGPNRR 60
           MAVR    LLLLGVF+FLCLS        Q+SSDGY +++  M E E    +V+RG NRR
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQLRRTHITQISSDGYQDQEAGMKEMEYDEDQVMRGANRR 60

Query: 61  LMQNIDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHA 112
           LMQ IDCG ECKRRCGAHSRP RC+RACGTCC RC+CVPPGTSGNREMCGTCYT+MTTH 
Sbjct: 61  LMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHG 120

[Close]

BLAST of Tan0001400 vs. ExPASy TrEMBL
Match: A0A6J1JZU9 (snakin-2-like OS=Cucurbita maxima OX=3661 GN=LOC111490323 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.5e-37
Identity = 81/116 (69.83%), Postives = 84/116 (72.41%), Query Frame = 0


Query: 1   MAVRFLLLLGVFIFLCLSQVS-----SDGYSEEQEEMGEYEEVVRGPNRRLMQNIDCGWE 60
           MA RFLLLLGV  FLCLS  S     S G+       G     VR PN R+M  IDCGWE
Sbjct: 1   MAARFLLLLGVLAFLCLSPASFLHGGSVGFDGNPGGGGGGGGTVRRPNERVMTKIDCGWE 60

Query: 61  CKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTKCP 112
           CKRRCGAHSRP RC+R CGTCCLRC CVPPGTSGNREMCGTCYT MTTH NKTKCP
Sbjct: 61  CKRRCGAHSRPNRCLRVCGTCCLRCNCVPPGTSGNREMCGTCYTGMTTHGNKTKCP 116

[Close]

BLAST of Tan0001400 vs. ExPASy TrEMBL
Match: A0A6J1CAF9 (snakin-2-like OS=Momordica charantia OX=3673 GN=LOC111008909 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.4e-37
Identity = 82/112 (73.21%), Postives = 89/112 (79.46%), Query Frame = 0


Query: 1   MAV-RFLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQNIDCGWECKRR 60
           MAV RFLLLLGV +FLCLS+V  +G  EE        E VRGPNRRLM+ IDCG  CKRR
Sbjct: 1   MAVARFLLLLGVLVFLCLSEVYCEGQLEEG------FEGVRGPNRRLMRFIDCGGSCKRR 60

Query: 61  CGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTKCP 112
           CGAHSRPK C+RACGTCC RC+CVPPGTSGNRE+CG CYT MTTH NKTKCP
Sbjct: 61  CGAHSRPKLCIRACGTCCARCRCVPPGTSGNREVCGRCYTGMTTHHNKTKCP 106

[Close]

BLAST of Tan0001400 vs. TAIR 10
Match: AT5G14920.1 (Gibberellin-regulated family protein )

HSP 1 Score: 89.7 bits (221), Expect = 1.6e-18
Identity = 39/62 (62.90%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 50  IDCGWECKRRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTK 109
           IDC   C  RCG HSR   C+RAC TCC RCKCVPPGT GN+E CG+CY  M T   K+K
Sbjct: 214 IDCVPLCGTRCGQHSRKNVCMRACVTCCYRCKCVPPGTYGNKEKCGSCYANMKTRGGKSK 273

Query: 110 CP 112
           CP
Sbjct: 274 CP 275

[Close]

BLAST of Tan0001400 vs. TAIR 10
Match: AT4G09610.1 (GAST1 protein homolog 2 )

HSP 1 Score: 85.9 bits (211), Expect = 2.2e-17
Identity = 48/111 (43.24%), Postives = 64/111 (57.66%), Query Frame = 0


Query: 1   MAVRFLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQNIDCGWECKRRC 60
           MAV    L+ + I +CL+      ++ +  ++G  E VV+         IDCG  CK RC
Sbjct: 1   MAVFRSTLVLLLIIVCLTTYELHVHAADGAKVG--EGVVK---------IDCGGRCKDRC 60

Query: 61  GAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTKCP 112
              SR K C+RAC +CC RC CVPPGTSGN  +C  CY ++TTH  + KCP
Sbjct: 61  SKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLC-PCYASITTHGGRLKCP 99

[Close]

BLAST of Tan0001400 vs. TAIR 10
Match: AT4G09600.1 (GAST1 protein homolog 3 )

HSP 1 Score: 85.5 bits (210), Expect = 2.9e-17
Identity = 46/111 (41.44%), Postives = 62/111 (55.86%), Query Frame = 0


Query: 1   MAVRFLLLLGVFIFLCLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQNIDCGWECKRRC 60
           MA+    L+ + I  CL+      ++ E  ++G  E VV+         IDCG  CK RC
Sbjct: 1   MAIFRSTLVLLLILFCLTTFELHVHAAEDSQVG--EGVVK---------IDCGGRCKGRC 60

Query: 61  GAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTKCP 112
              SRP  C+RAC +CC RC CVPPGT+GN  +C  CY ++TT   + KCP
Sbjct: 61  SKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLC-PCYASITTRGGRLKCP 99

[Close]

BLAST of Tan0001400 vs. TAIR 10
Match: AT1G22690.1 (Gibberellin-regulated family protein )

HSP 1 Score: 84.0 bits (206), Expect = 8.5e-17
Identity = 48/114 (42.11%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 3   VRFLLLLGVFIFL--CLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQN---IDCGWECK 62
           V F+ L+  F+ L   L+++SS   +E        +E      +R   +   I+CG  C 
Sbjct: 7   VAFVTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACA 66

Query: 63  RRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTKCP 112
           RRC   SR K C RACG+CC +C+CVPPGTSGN   C  CY ++ TH NK KCP
Sbjct: 67  RRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASC-PCYASIRTHGNKLKCP 119

[Close]

BLAST of Tan0001400 vs. TAIR 10
Match: AT1G22690.2 (Gibberellin-regulated family protein )

HSP 1 Score: 84.0 bits (206), Expect = 8.5e-17
Identity = 48/114 (42.11%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 3   VRFLLLLGVFIFL--CLSQVSSDGYSEEQEEMGEYEEVVRGPNRRLMQN---IDCGWECK 62
           V F+ L+  F+ L   L+++SS   +E        +E      +R   +   I+CG  C 
Sbjct: 7   VAFVTLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACA 66

Query: 63  RRCGAHSRPKRCVRACGTCCLRCKCVPPGTSGNREMCGTCYTTMTTHANKTKCP 112
           RRC   SR K C RACG+CC +C+CVPPGTSGN   C  CY ++ TH NK KCP
Sbjct: 67  RRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASC-PCYASIRTHGNKLKCP 119

The following BLAST results are available for this feature:

BLAST of Tan0001400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93X17	2.6e-18	64.06	Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1	[more]
Q9LFR3	2.2e-17	62.90	Gibberellin-regulated protein 14 OS=Arabidopsis thaliana OX=3702 GN=GASA14 PE=1 ...	[more]
P46688	3.2e-16	43.24	Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV...	[more]
P46687	4.1e-16	41.44	Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV...	[more]
Q8GWK5	1.2e-15	42.11	Gibberellin-regulated protein 9 OS=Arabidopsis thaliana OX=3702 GN=GASA9 PE=3 SV...	[more]

BLAST of Tan0001400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438104.1	2.9e-43	75.42	PREDICTED: snakin-2-like isoform X2 [Cucumis melo]	[more]
XP_038895055.1	1.1e-42	78.26	snakin-2-like [Benincasa hispida]	[more]
KGN64291.1	3.2e-42	75.65	hypothetical protein Csa_013222 [Cucumis sativus]	[more]
XP_008438094.1	4.7e-41	70.63	PREDICTED: snakin-2-like isoform X1 [Cucumis melo]	[more]
XP_022994681.1	3.1e-37	69.83	snakin-2-like [Cucurbita maxima]	[more]

BLAST of Tan0001400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AVJ9	1.4e-43	75.42	snakin-2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483303 PE=3 SV=1	[more]
A0A0A0LW79	1.6e-42	75.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045890 PE=3 SV=1	[more]
A0A1S3AW57	2.3e-41	70.63	snakin-2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483303 PE=3 SV=1	[more]
A0A6J1JZU9	1.5e-37	69.83	snakin-2-like OS=Cucurbita maxima OX=3661 GN=LOC111490323 PE=3 SV=1	[more]
A0A6J1CAF9	3.4e-37	73.21	snakin-2-like OS=Momordica charantia OX=3673 GN=LOC111008909 PE=3 SV=1	[more]

BLAST of Tan0001400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14920.1	1.6e-18	62.90	Gibberellin-regulated family protein	[more]
AT4G09610.1	2.2e-17	43.24	GAST1 protein homolog 2	[more]
AT4G09600.1	2.9e-17	41.44	GAST1 protein homolog 3	[more]
AT1G22690.1	8.5e-17	42.11	Gibberellin-regulated family protein	[more]
AT1G22690.2	8.5e-17	42.11	Gibberellin-regulated family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 51..111 e-value: 2.1E-19 score: 69.4
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 1..111
None	No IPR available	PANTHER	PTHR23201:SF85	PROTEIN 3, PUTATIVE-RELATED	coord: 1..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0001400.1	Tan0001400.1	mRNA