Tan0001353 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTGATTCTTTCATTTTGAAATTTGCTGCTGAGGCAACTTCCAGTACTCTGTTCATCTTCTGCTTCTTCAATTTCATCATACTCATCATTCTCTTCTCCAATTTTCATCAGCAAAATGATGATGATTATGATGTCCCACTTTCAATTGTCATTCACAATAACACAAATACACAACAAAACTTCATGCTTCACAAAAATTTCACTGTTCAACTAACAGAGACTCTAAATGAACCAGACAGATGCGTGAGTTTCAACTGCAGTGATAATAATGTTGAAGAGAGTGATGAAGATCATGAGGAAGAGGATGAGGACAAGGATGATTTCAAACGAAGAGTGGAAGACTTTATTGAAAAGGTTAATACGGGGTGGAGACAAGAACGCCAAACAACCTCGAGATGATCGGTTGAATCGAATTTCATTTGTTCCAAGCATACTCCACTCCCTCCTAGCCAAACAAGAATCTCCATCACTTTTACCTTTGGGTTAAGTTCTACCTCTCTCTCTCTGTTTTGATATCAGATTTTTGAAGAAGATATGGACAAGGGCACAAGAATCAAGTAGATTCAATCGGAACAATTTTACAAAGATGTAATTCTCTAGTGTTCGATTCAAGGACGCAAAGATGTAACTTTATGATTTCATTAGAAAGCGAATCAAATTGCTAATATTGAAACAAAGCGTTAGTATTCAATCCAAATTTTTCTTCCAACCTATAATACTTCTATTCATTTAAACATAAATTCATTCATCACATATTGATGTTGCATAAATAGGGTCGATTGACTGCGATCTCGACTTGGCTACATATTTTCCTACGTGCAATTTTGTTTACTAGGGGTGTCAAACAACATCAAATTCATTATTTCCAAATAAGAACACTTCAGGGCAATGAATCAAATCCTCTTGCAGATCTTAGTAGTTAA ATGGTTGATTCTTTCATTTTGAAATTTGCTGCTGAGGCAACTTCCAGTACTCTGTTCATCTTCTGCTTCTTCAATTTCATCATACTCATCATTCTCTTCTCCAATTTTCATCAGCAAAATGATGATGATTATGATGTCCCACTTTCAATTGTCATTCACAATAACACAAATACACAACAAAACTTCATGCTTCACAAAAATTTCACTGTTCAACTAACAGAGACTCTAAATGAACCAGACAGATGCGTGAGTTTCAACTGCAGTGATAATAATGTTGAAGAGAGTGATGAAGATCATGAGGAAGAGGATGAGGACAAGGATGATTTCAAACGAAGAGTGGAAGACTTTATTGAAAAGGGTCGATTGACTGCGATCTCGACTTGGCTACATATTTTCCTACGTGCAATTTTGTTTACTAGGGGTGTCAAACAACATCAAATTCATTATTTCCAAATAAGAACACTTCAGGGCAATGAATCAAATCCTCTTGCAGATCTTAGTAGTTAA ATGGTTGATTCTTTCATTTTGAAATTTGCTGCTGAGGCAACTTCCAGTACTCTGTTCATCTTCTGCTTCTTCAATTTCATCATACTCATCATTCTCTTCTCCAATTTTCATCAGCAAAATGATGATGATTATGATGTCCCACTTTCAATTGTCATTCACAATAACACAAATACACAACAAAACTTCATGCTTCACAAAAATTTCACTGTTCAACTAACAGAGACTCTAAATGAACCAGACAGATGCGTGAGTTTCAACTGCAGTGATAATAATGTTGAAGAGAGTGATGAAGATCATGAGGAAGAGGATGAGGACAAGGATGATTTCAAACGAAGAGTGGAAGACTTTATTGAAAAGGGTCGATTGACTGCGATCTCGACTTGGCTACATATTTTCCTACGTGCAATTTTGTTTACTAGGGGTGTCAAACAACATCAAATTCATTATTTCCAAATAAGAACACTTCAGGGCAATGAATCAAATCCTCTTGCAGATCTTAGTAGTTAA MVDSFILKFAAEATSSTLFIFCFFNFIILIILFSNFHQQNDDDYDVPLSIVIHNNTNTQQNFMLHKNFTVQLTETLNEPDRCVSFNCSDNNVEESDEDHEEEDEDKDDFKRRVEDFIEKGRLTAISTWLHIFLRAILFTRGVKQHQIHYFQIRTLQGNESNPLADLSS Homology
BLAST of Tan0001353 vs. NCBI nr
Match: XP_031742158.1 (probable ATP-dependent RNA helicase ddx52 [Cucumis sativus]) HSP 1 Score: 115.9 bits (289), Expect = 3.3e-22 Identity = 74/132 (56.06%), Postives = 102/132 (77.27%), Query Frame = 0
BLAST of Tan0001353 vs. NCBI nr
Match: KAG6605668.1 (hypothetical protein SDJN03_02985, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 112.8 bits (281), Expect = 2.8e-21 Identity = 79/129 (61.24%), Postives = 92/129 (71.32%), Query Frame = 0
BLAST of Tan0001353 vs. NCBI nr
Match: XP_024928006.1 (uncharacterized protein LOC112491100 [Ziziphus jujuba]) HSP 1 Score: 55.8 bits (133), Expect = 4.1e-04 Identity = 42/113 (37.17%), Postives = 64/113 (56.64%), Query Frame = 0
BLAST of Tan0001353 vs. ExPASy TrEMBL
Match: A0A6P6G1P3 (uncharacterized protein LOC112491100 OS=Ziziphus jujuba OX=326968 GN=LOC112491100 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 2.0e-04 Identity = 42/113 (37.17%), Postives = 64/113 (56.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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