
Tan0001295 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCTGGGTCGAGAAAAGAGAGCGACAGATGGCAATTGGGCAAAAAACCCTTATGAAGTATGAACTTGATTCAAAATACTAAGACCTAAATTTGGGTCAACTTCTTCGATTGCGTCGCTGGATCACTCACTCGGATTTCGTCAATGGGAAGGGAGACAAACGGGAATCGTTGTGTGCAGTGTGGATTTAGAACGAATCAACTGTTCGTTCTGTACTCACCCGGGAACATGCATCTTATGAAATGCGTACGCTTGCTTTATCAAGATTTCTCTCTCACCTGTCCATTTATGCGCTCTTTAAGTCCTTGTTTTCTTTTATTTTATGTAAAATCCTTATGCTTCTTAATGTTAAAAGGACAACTGCAAATCCGTTGCGGACGATTACATTGAATGCGAAGTGATGGTGAATTGCTCACTCCTTTATCACTGTTGTTGTATTCTTTTATGCTTTCTTTTCCATCCATTTGTTTATGCAATTACTTTATCTGAGGAAGTTACTTTTTCAAGTGGTAGATTCTTCTAATCGATTTGATACTGCACAAGTGCCAAGCTTACAGACATTTGCTCTACAACCTACTTGATAGAGATCGCTTGTCTTGTCAGGTACACACCCAATTACTTCATTTCACAGACGCGCGGAAGAAAATAAAATGAAAAAGATATATGAGTTACTAATCTTATTGACAATTGGTTTTGAGATGTAACTATATAATCTAATATATTTATTAGCTTTGACCTCCTATGCATGCGTCCCTAATACTGTATTTAAGGATTTTTTTTTTTTTTAAATCTTGTTTGTAATCTCTTAGTTCGATTATTATTTTTCTAATTGTTATTGTTATTTAAAAGGCTTTTCTTCCTTTTGGTTTTTTCCTCGTGCTATATTTCTTCCCTGCTGAATCCGTAGTCTCCCGGATGCAAACCGAACTTCATTTTCTGTGTGGTAGTCGTAGTCCTAACATCACCGGGGCATTATTCGAGTTGATAAACGATTGATTAATAATTAAGCCCTTATGAGTTGTTTTTCCTAACCGTCGTTTCAGATACTAATTCGACCATTTCCTTCACTCTTTTGTAGGATTTGATGTGGAAGTTTGGTCTAAGTTTTCTTCTTTTGGATGCTTGTATCCAATTCCGTTGGGAAGTCTCCCCTAGGGGTGTCTTGTCCTTCTCGTACTTTACTATTGACATCATACTTTTTTCTTTTGACACATATAATCTCTAGATTGTGTACCTTAGCAACAACCAATTAGACAGGTACATAATTCTGAGACTAAGTGAGAAACAATCATCCATGAGCTTTTCATCAACAATTGGTATTTGTCAAAAGGTTTGCAATCGCTTATGTAACCCTTTTTTTCGTTGCTTTAGATGTTTCATGATGATCATGTACATTTATGGAAGTTGTCGTAAAGATCTTTGTAGACTTTCATGGATGTGTCTCTCGGAAATATTGTGTTTCTTTGTGCTCTCCATATTTTGTCGAGGGTATTTCTGAAGAGCTCAGCTGCGGTCCATAGGTAAGTTGTAAAACATTTTTAAGACTGTTGCTTTAATTTTTGAGATACACCCAGATTGTTTTCTTCAGTTGCAACCCGCAATGGAATATGCATCCATTTGCGTGTAGGACGTCTGACTTCGATTCCTATTTGTTTGTTTCTCATTGCTTGTGCAGGTACAGGTACAAAGACTTGTTCTTTGCCATCATTATTTCAAGTTACTTCAAGATCTTTCTTGTTAGCATGATGGTATATTTACGATCATCATAGTTATTTATTTATTTATTTTATCGTAGACGTTGCAGCCTAATTATCTAAAATGTGTTGAATGAATACTTGTGTATCTTTCTGATATTCAGCGTGTCTTACTGCAGATCTGGGAATTTCCATCCACAGTGATCTTCATCATAGATTTATTTGTTCTATCGTCCAATGCAGTAGCAATTAAAGGTGAGGAAAGCCTTAAATTGTCAGCAGATGACTCTGGCTTCTTGGACGATTATTGTATAGATTAGGGATTTCACCAGATTCATGATTAAAAGCTTTTTTGTGAAGCAGTGATCACGGAGTCAGCTGTGAGTAGATGCATTGGAACTTGCTTGTGTGCTCATGGAGCTAAGTTTTTGGCCACAAAGCTTCTTGAGAAATGAAGTTTAAAGATGGACACTGGTACAACAGCCGACACCCTACTACATGAGGCCAGACCAGAATCCAATCATTAATTATGGAACTTCAAATTTAGAGGATGGCTGGAGCAGGGGATCTGGCTTGTGGTTTCTTATACAGCCGGACTGATGAAAGCTATTTTCGGAATTTGAATCGGTTATTTTAAATATTGTCCATCATTTTGGTAGTTGATGTGGTGGCTTTGAAAGGAGGTATATTTCTTGTATC GCTGGGTCGAGAAAAGAGAGCGACAGATGGCAATTGGGCAAAAAACCCTTATGAAGTATGAACTTGATTCAAAATACTAAGACCTAAATTTGGGTCAACTTCTTCGATTGCGTCGCTGGATCACTCACTCGGATTTCGTCAATGGGAAGGGAGACAAACGGGAATCGTTGTGTGCAGTGTGGATTTAGAACGAATCAACTGTTCGTTCTGTACTCACCCGGGAACATGCATCTTATGAAATGCGACAACTGCAAATCCGTTGCGGACGATTACATTGAATGCGAAGTGATGATTCTTCTAATCGATTTGATACTGCACAAGTGCCAAGCTTACAGACATTTGCTCTACAACCTACTTGATAGAGATCGCTTGTCTTGTCAGGATTTGATGTGGAAGTTTGGTCTAAGTTTTCTTCTTTTGGATGCTTGTATCCAATTCCGTTGGGAAGTCTCCCCTAGGGGTGTCTTGTCCTTCTCGTACTTTACTATTGACATCATACTTTTTTCTTTTGACACATATAATCTCTAGATTGTGTACCTTAGCAACAACCAATTAGACAGGTACATAATTCTGAGACTAAGTGAGAAACAATCATCCATGAGCTTTTCATCAACAATTGGTATTTGTCAAAAGGTTTGCAATCGCTTATGTAACCCTTTTTTTCGTTGCTTTAGATGTTTCATGATGATCATGTACATTTATGGAAGTTGTCGTAAAGATCTTTGTAGACTTTCATGGATGTGTCTCTCGGAAATATTGTGTTTCTTTGTGCTCTCCATATTTTGTCGAGGGTATTTCTGAAGAGCTCAGCTGCGGTCCATAGGTAAGTTGTAAAACATTTTTAAGACTGTTGCTTTAATTTTTGAGATACACCCAGATTGTTTTCTTCAGTTGCAACCCGCAATGGAATATGCATCCATTTGCGTGTAGGACGTCTGACTTCGATTCCTATTTGTTTGTTTCTCATTGCTTGTGCAGGTACAGGTACAAAGACTTGTTCTTTGCCATCATTATTTCAAGTTACTTCAAGATCTTTCTTGTTAGCATGATGATCTGGGAATTTCCATCCACAGTGATCTTCATCATAGATTTATTTGTTCTATCGTCCAATGCAGTAGCAATTAAAGTGATCACGGAGTCAGCTGTGAGTAGATGCATTGGAACTTGCTTGTGTGCTCATGGAGCTAAGTTTTTGGCCACAAAGCTTCTTGAGAAATGAAGTTTAAAGATGGACACTGGTACAACAGCCGACACCCTACTACATGAGGCCAGACCAGAATCCAATCATTAATTATGGAACTTCAAATTTAGAGGATGGCTGGAGCAGGGGATCTGGCTTGTGGTTTCTTATACAGCCGGACTGATGAAAGCTATTTTCGGAATTTGAATCGGTTATTTTAAATATTGTCCATCATTTTGGTAGTTGATGTGGTGGCTTTGAAAGGAGGTATATTTCTTGTATC ATGGGAAGGGAGACAAACGGGAATCGTTGTGTGCAGTGTGGATTTAGAACGAATCAACTGTTCGTTCTGTACTCACCCGGGAACATGCATCTTATGAAATGCGACAACTGCAAATCCGTTGCGGACGATTACATTGAATGCGAAGTGATGATTCTTCTAATCGATTTGATACTGCACAAGTGCCAAGCTTACAGACATTTGCTCTACAACCTACTTGATAGAGATCGCTTGTCTTGTCAGGATTTGATGTGGAAGTTTGGTCTAAGTTTTCTTCTTTTGGATGCTTGTATCCAATTCCGTTGGGAAGTCTCCCCTAGGGGTGTCTTGTCCTTCTCGTACTTTACTATTGACATCATACTTTTTTCTTTTGACACATATAATCTCTAG MGRETNGNRCVQCGFRTNQLFVLYSPGNMHLMKCDNCKSVADDYIECEVMILLIDLILHKCQAYRHLLYNLLDRDRLSCQDLMWKFGLSFLLLDACIQFRWEVSPRGVLSFSYFTIDIILFSFDTYNL Homology
BLAST of Tan0001295 vs. ExPASy Swiss-Prot
Match: Q5MK23 (Protein ARV 2 OS=Arabidopsis thaliana OX=3702 GN=ARV2 PE=1 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.3e-26 Identity = 49/85 (57.65%), Postives = 69/85 (81.18%), Query Frame = 0
BLAST of Tan0001295 vs. ExPASy Swiss-Prot
Match: Q5MK24 (Protein ARV 1 OS=Arabidopsis thaliana OX=3702 GN=ARV1 PE=2 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 2.5e-25 Identity = 51/87 (58.62%), Postives = 66/87 (75.86%), Query Frame = 0
BLAST of Tan0001295 vs. ExPASy Swiss-Prot
Match: Q9HDX5 (Protein arv1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=arv1 PE=3 SV=3) HSP 1 Score: 67.8 bits (164), Expect = 1.0e-10 Identity = 31/66 (46.97%), Postives = 44/66 (66.67%), Query Frame = 0
BLAST of Tan0001295 vs. ExPASy Swiss-Prot
Match: Q54GD9 (Protein arv1 homolog OS=Dictyostelium discoideum OX=44689 GN=arv1 PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 8.7e-10 Identity = 27/64 (42.19%), Postives = 41/64 (64.06%), Query Frame = 0
BLAST of Tan0001295 vs. ExPASy Swiss-Prot
Match: Q9D0U9 (Protein ARV1 OS=Mus musculus OX=10090 GN=Arv1 PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 3.7e-08 Identity = 26/62 (41.94%), Postives = 40/62 (64.52%), Query Frame = 0
BLAST of Tan0001295 vs. NCBI nr
Match: XP_038893484.1 (protein ARV 2-like [Benincasa hispida]) HSP 1 Score: 183.7 bits (465), Expect = 9.8e-43 Identity = 86/95 (90.53%), Postives = 91/95 (95.79%), Query Frame = 0
BLAST of Tan0001295 vs. NCBI nr
Match: XP_008437754.1 (PREDICTED: protein arv1 homolog isoform X2 [Cucumis melo]) HSP 1 Score: 179.9 bits (455), Expect = 1.4e-41 Identity = 84/95 (88.42%), Postives = 89/95 (93.68%), Query Frame = 0
BLAST of Tan0001295 vs. NCBI nr
Match: XP_008437755.1 (PREDICTED: protein arv1 homolog isoform X3 [Cucumis melo]) HSP 1 Score: 179.9 bits (455), Expect = 1.4e-41 Identity = 84/95 (88.42%), Postives = 89/95 (93.68%), Query Frame = 0
BLAST of Tan0001295 vs. NCBI nr
Match: XP_008437757.1 (PREDICTED: protein arv1 homolog isoform X5 [Cucumis melo]) HSP 1 Score: 179.9 bits (455), Expect = 1.4e-41 Identity = 84/95 (88.42%), Postives = 89/95 (93.68%), Query Frame = 0
BLAST of Tan0001295 vs. NCBI nr
Match: XP_008437752.1 (PREDICTED: protein arv1 homolog isoform X1 [Cucumis melo] >XP_016899054.1 PREDICTED: protein arv1 homolog isoform X1 [Cucumis melo]) HSP 1 Score: 179.9 bits (455), Expect = 1.4e-41 Identity = 84/95 (88.42%), Postives = 89/95 (93.68%), Query Frame = 0
BLAST of Tan0001295 vs. ExPASy TrEMBL
Match: A0A1S4DSU3 (protein arv1 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483093 PE=3 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 6.9e-42 Identity = 84/95 (88.42%), Postives = 89/95 (93.68%), Query Frame = 0
BLAST of Tan0001295 vs. ExPASy TrEMBL
Match: A0A1S3AVC0 (protein arv1 homolog isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483093 PE=3 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 6.9e-42 Identity = 84/95 (88.42%), Postives = 89/95 (93.68%), Query Frame = 0
BLAST of Tan0001295 vs. ExPASy TrEMBL
Match: A0A1S3AUE9 (protein arv1 homolog isoform X5 OS=Cucumis melo OX=3656 GN=LOC103483093 PE=3 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 6.9e-42 Identity = 84/95 (88.42%), Postives = 89/95 (93.68%), Query Frame = 0
BLAST of Tan0001295 vs. ExPASy TrEMBL
Match: A0A1S3AVD2 (protein arv1 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483093 PE=3 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 6.9e-42 Identity = 84/95 (88.42%), Postives = 89/95 (93.68%), Query Frame = 0
BLAST of Tan0001295 vs. ExPASy TrEMBL
Match: A0A0A0L5K8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G116660 PE=3 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 1.2e-41 Identity = 83/95 (87.37%), Postives = 89/95 (93.68%), Query Frame = 0
BLAST of Tan0001295 vs. TAIR 10
Match: AT4G01510.1 (Arv1-like protein ) HSP 1 Score: 119.8 bits (299), Expect = 1.6e-27 Identity = 49/85 (57.65%), Postives = 69/85 (81.18%), Query Frame = 0
BLAST of Tan0001295 vs. TAIR 10
Match: AT1G01020.1 (Arv1-like protein ) HSP 1 Score: 116.3 bits (290), Expect = 1.8e-26 Identity = 51/87 (58.62%), Postives = 66/87 (75.86%), Query Frame = 0
BLAST of Tan0001295 vs. TAIR 10
Match: AT1G01020.2 (Arv1-like protein ) HSP 1 Score: 116.3 bits (290), Expect = 1.8e-26 Identity = 51/87 (58.62%), Postives = 66/87 (75.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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