Tan0001260 (gene) Snake gourd v1

Overview


Name	Tan0001260
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein SHI RELATED SEQUENCE 1-like
Location	LG01: 12325409 .. 12327215 (-)
RNA-Seq Expression	Tan0001260
Synteny	Tan0001260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAGAGGAGAGAGAGAGAGAGAGAGAGGAGAAAAAATAAGAAAGGAAAAGAAAGAAGAGAGAGAAAAGGTAATCAATCATCTCTGCAACTGCAACAAAATCAGAGCATAGAGAAAGGGAAAGGGCTCAGAGAAGACAGAGAAGAAGAACAGCAACAACAAGAAGAAAGATGAGTTGATATGGGAGTTTTGTTGTGTATTTAAGTTGGCACCGCCGTTTCCACTGAGCCAAAAAAAACCCATGGCGGCGTTGCAGAGTTCAGTTCAGTTTTAGAGAGAGAGGAACAAAAAAAAAATTACCCTTTAATGAATTAGAGAGAGAGATTTCAGAATCTGATTCCCAATTCAACCCTTTTCTCTTTCCCACCTCTTTTTTTCTTTTTTTTTTCTTTGTAGTACGAAGAATTTGATTAAGAATTTCGAGAATTTGATTAGGTAAAAGAAAGGAAAAAAAATTGGAAAGGAATTGATTGATACATACCCTTTTTTCAACTCTGGCTTCCGATCGGCCTTGAGAGGTTGTTTCTGATATGGATTTTAATTCAAAATCAGGAATACTATCACCGGTGGAAATATGGCCGGTTTTTTTCCACTAGGCGGCGGAAGAGGACCCAATTATCACCTTCCCAGCAGCACCAGCACCGGCGGCGGCGAGATTATTCATCCCACCGACGGATTATTTTGGTATAAAAATTATGAGAGCTTTGAATTATGGCAGCAACAGCAGCAGCAGCAGCAGCAAGGGGGAGAAGGGTTTGGTTACTCCGGCGATGAATCGCCGCCGAGATCGTCGTTATTGATGACGAGATCCGGCAGAGGCGGCGGAGGGCAAGTAATGAGCTGCCAAGACTGTGGAAATCAAGCCAAAAAAGATTGCCTTCACATGCGATGTAGAACTTGCTGTAAAAGCCGTGGCTTTGACTGTGAAACCCACGTCAAAAGCACTTGGGTTCCGGCCTCCAAACGCCGTGAGCGGCAGCTCCATAGCGACGGCTCTAACCCCAAACGCCCTCGAGACAACCACGCCGCTTCTTCAGGTACAATTAAATTCAACTCTGTACATGTCTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTTGCTTTCTAAATTTCTTGTGAAGAGGGTTTTGGTTTTGGGAGCATTTCCAAATTCCAAGAAGACCCACCTCGATTTTGGTCATAATTAAGAGAATCAAATTCTTCCTCTCTCAAATGGGTTAATTTTTTTTTTTTTTTTTGGGGGGGTTTGGTTTTAGGGTTGGAAATGGGGAATTTTCCGGTGGAAGTGAGCTCAACGGCGGTGTTCCGGTGCGTACGAATAACAACGTTGGACGAAACCAACGACGAATATGCTTATCAAACAGCTGTCAACATCGGAGGCCATATCTTCAAGGGAATTCTTCACGACCACGGCCCTGAACGACTACCACCACACAACTCCACCTCCCCCGACGGCGGCGCCCTCCTCATCACCGCCCCCTCCACCGCCGCAATTCCCACCGCGGTCGAATCCCCACCCATCAGCGCCGCATTGCTCGATCCTCCTCCGCCGTACCCAACTCCTCTCAGCACCTACATCGCCGCCGGTACGCAATTTTTTCTTCCTCCAACTTCTTAGACAACCCTTCTAGTTTTCCCTCTCTCTTAAATTTTATGACATTGCCATTTAAGAGAAATAGGTGAAACAAAAAAAAAAATTGAAGGAAGTTTGTGCCATAAGTATATAATTTTTCATGATAAATTTATAAGCTTGTAATTTTTCAAGAGTTTGCATTAATATGCCGCCATTGTTGGAACTTCGATGCTGC

mRNA sequence

AGAAAGAGGAGAGAGAGAGAGAGAGAGAGGAGAAAAAATAAGAAAGGAAAAGAAAGAAGAGAGAGAAAAGGTAATCAATCATCTCTGCAACTGCAACAAAATCAGAGCATAGAGAAAGGGAAAGGGCTCAGAGAAGACAGAGAAGAAGAACAGCAACAACAAGAAGAAAGATGAGTTGATATGGGAGTTTTGTTGTGTATTTAAGTTGGCACCGCCGTTTCCACTGAGCCAAAAAAAACCCATGGCGGCGTTGCAGAGTTCAGTTCAGTTTTAGAGAGAGAGGAACAAAAAAAAAATTACCCTTTAATGAATTAGAGAGAGAGATTTCAGAATCTGATTCCCAATTCAACCCTTTTCTCTTTCCCACCTCTTTTTTTCTTTTTTTTTTCTTTGTAGTACGAAGAATTTGATTAAGAATTTCGAGAATTTGATTAGGTAAAAGAAAGGAAAAAAAATTGGAAAGGAATTGATTGATACATACCCTTTTTTCAACTCTGGCTTCCGATCGGCCTTGAGAGGTTGTTTCTGATATGGATTTTAATTCAAAATCAGGAATACTATCACCGGTGGAAATATGGCCGGTTTTTTTCCACTAGGCGGCGGAAGAGGACCCAATTATCACCTTCCCAGCAGCACCAGCACCGGCGGCGGCGAGATTATTCATCCCACCGACGGATTATTTTGGTATAAAAATTATGAGAGCTTTGAATTATGGCAGCAACAGCAGCAGCAGCAGCAGCAAGGGGGAGAAGGGTTTGGTTACTCCGGCGATGAATCGCCGCCGAGATCGTCGTTATTGATGACGAGATCCGGCAGAGGCGGCGGAGGGCAAGTAATGAGCTGCCAAGACTGTGGAAATCAAGCCAAAAAAGATTGCCTTCACATGCGATGTAGAACTTGCTGTAAAAGCCGTGGCTTTGACTGTGAAACCCACGTCAAAAGCACTTGGGTTCCGGCCTCCAAACGCCGTGAGCGGCAGCTCCATAGCGACGGCTCTAACCCCAAACGCCCTCGAGACAACCACGCCGCTTCTTCAGGGTTGGAAATGGGGAATTTTCCGGTGGAAGTGAGCTCAACGGCGGTGTTCCGGTGCGTACGAATAACAACGTTGGACGAAACCAACGACGAATATGCTTATCAAACAGCTGTCAACATCGGAGGCCATATCTTCAAGGGAATTCTTCACGACCACGGCCCTGAACGACTACCACCACACAACTCCACCTCCCCCGACGGCGGCGCCCTCCTCATCACCGCCCCCTCCACCGCCGCAATTCCCACCGCGGTCGAATCCCCACCCATCAGCGCCGCATTGCTCGATCCTCCTCCGCCGTACCCAACTCCTCTCAGCACCTACATCGCCGCCGGTACGCAATTTTTTCTTCCTCCAACTTCTTAGACAACCCTTCTAGTTTTCCCTCTCTCTTAAATTTTATGACATTGCCATTTAAGAGAAATAGGTGAAACAAAAAAAAAAATTGAAGGAAGTTTGTGCCATAAGTATATAATTTTTCATGATAAATTTATAAGCTTGTAATTTTTCAAGAGTTTGCATTAATATGCCGCCATTGTTGGAACTTCGATGCTGC

Coding sequence (CDS)

ATGGCCGGTTTTTTTCCACTAGGCGGCGGAAGAGGACCCAATTATCACCTTCCCAGCAGCACCAGCACCGGCGGCGGCGAGATTATTCATCCCACCGACGGATTATTTTGGTATAAAAATTATGAGAGCTTTGAATTATGGCAGCAACAGCAGCAGCAGCAGCAGCAAGGGGGAGAAGGGTTTGGTTACTCCGGCGATGAATCGCCGCCGAGATCGTCGTTATTGATGACGAGATCCGGCAGAGGCGGCGGAGGGCAAGTAATGAGCTGCCAAGACTGTGGAAATCAAGCCAAAAAAGATTGCCTTCACATGCGATGTAGAACTTGCTGTAAAAGCCGTGGCTTTGACTGTGAAACCCACGTCAAAAGCACTTGGGTTCCGGCCTCCAAACGCCGTGAGCGGCAGCTCCATAGCGACGGCTCTAACCCCAAACGCCCTCGAGACAACCACGCCGCTTCTTCAGGGTTGGAAATGGGGAATTTTCCGGTGGAAGTGAGCTCAACGGCGGTGTTCCGGTGCGTACGAATAACAACGTTGGACGAAACCAACGACGAATATGCTTATCAAACAGCTGTCAACATCGGAGGCCATATCTTCAAGGGAATTCTTCACGACCACGGCCCTGAACGACTACCACCACACAACTCCACCTCCCCCGACGGCGGCGCCCTCCTCATCACCGCCCCCTCCACCGCCGCAATTCCCACCGCGGTCGAATCCCCACCCATCAGCGCCGCATTGCTCGATCCTCCTCCGCCGTACCCAACTCCTCTCAGCACCTACATCGCCGCCGGTACGCAATTTTTTCTTCCTCCAACTTCTTAG

Protein sequence

MAGFFPLGGGRGPNYHLPSSTSTGGGEIIHPTDGLFWYKNYESFELWQQQQQQQQQGGEGFGYSGDESPPRSSLLMTRSGRGGGGQVMSCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERQLHSDGSNPKRPRDNHAASSGLEMGNFPVEVSSTAVFRCVRITTLDETNDEYAYQTAVNIGGHIFKGILHDHGPERLPPHNSTSPDGGALLITAPSTAAIPTAVESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS

Homology

[Close]

BLAST of Tan0001260 vs. ExPASy Swiss-Prot
Match: Q9SD40 (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 204.1 bits (518), Expect = 2.0e-51
Identity = 156/374 (41.71%), Postives = 196/374 (52.41%), Query Frame = 0


Query: 1   MAGFFPL-----GGGRGPNYHLPSSTSTGGGEIIHPTDGLFWYKN--------------- 60
           MAGFF L     GGG G N      ++T     +  ++   WY+N               
Sbjct: 1   MAGFFSLDGGGGGGGGGGNNQEDHRSNTNPPPPV--SEAWLWYRNPNVNANANTNVNANA 60

Query: 61  -------YESFELWQ---------QQQQQQQQ-------GGEG--------FGYSGDESP 120
                    + ELWQ         Q QQ QQ+        G G        F  SG+ S 
Sbjct: 61  PSSSNAALGTLELWQNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNHNQFDISGETST 120

Query: 121 P----RSSLLMTRSGRGGGGQ-VMSCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKST 180
                 ++++M RSG  GGG   +SCQDCGNQAKKDC HMRCRTCCKSRGF+C THV+ST
Sbjct: 121 AGAGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRST 180

Query: 181 WVPASKRRER-----------QLHSDGSNPKRPRDNHAAS------------SGLEMGNF 240
           WVPA+KRRER           QL    S PKR R+N  A+            SGLE+GNF
Sbjct: 181 WVPAAKRRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNF 240

Query: 241 PVEVSSTAVFRCVRITTLDETNDEYAYQTAVNIGGHIFKGILHDHGP--------ERLPP 275
           P EVSS+AVFRCVR++++++  +E+AYQTAV+IGGHIFKGIL+D GP          +  
Sbjct: 241 PAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVAA 300

[Close]

BLAST of Tan0001260 vs. ExPASy Swiss-Prot
Match: Q9XGX0 (Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.4e-51
Identity = 147/332 (44.28%), Postives = 178/332 (53.61%), Query Frame = 0


Query: 1   MAGFFPLGGGRGPNYHLPSSTSTGGGEIIHPTDGLFWYKNYES--------------FEL 60
           MAGFF LG G G N      T+T        T+   W +N  S               EL
Sbjct: 1   MAGFFSLGHGGGGNTPDNHRTNTNNPS-SSGTESWLWCRNPNSNADGGEAGPSYKGTLEL 60

Query: 61  WQ---------QQQQQQQQ--------GGEGFGYSGDESPPRS--SLLMTRSGRGGGGQV 120
           WQ         QQQQQQQQ         G G G S       S  +L+M RSG G GG  
Sbjct: 61  WQHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSGSGGP- 120

Query: 121 MSCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERQLHSD-------- 180
            SCQDCGNQ+KKDC HMRCRTCCKSRG DC THVKSTWVPA+KRRERQ            
Sbjct: 121 -SCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQL 180

Query: 181 -GSNPKRPRDNHAA--------------SSGLEMGNFPVEVSSTAVFRCVRITTLDETND 240
            GS PKR R+   A              +SGLE+GNFP EVSS+AVFRCVR++++D+  +
Sbjct: 181 GGSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSVDDEEE 240

Query: 241 EYAYQTAVNIGGHIFKGILHDHGP-ERLPPHNSTSPDGGALLITAPSTAAIPTAVES--- 270
           EYAY+TAV+IGGH+FKG+L+D GP ER      + P    L+   PS ++    V     
Sbjct: 241 EYAYKTAVSIGGHVFKGVLYDQGPAERSSSGGGSQPLN--LITAGPSASSSSPNVSCNNG 300

[Close]

BLAST of Tan0001260 vs. ExPASy Swiss-Prot
Match: K4B6C9 (Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.8e-49
Identity = 143/359 (39.83%), Postives = 187/359 (52.09%), Query Frame = 0


Query: 1   MAGFFPLGGGRGPNYHLPSSTSTGGGEIIHPTDGLFW--YKN--------------YESF 60
           MA FF LGG +   +   SS+     + + PT+   W  Y+N              Y+ F
Sbjct: 1   MANFFSLGGNQEQQHQEISSS-----QALVPTESNNWFLYRNEHHHHHHNQEIPNTYKGF 60

Query: 61  ELWQ---------QQQQQQQQ----------------------GGEGFGYS-GDESPPRS 120
           ELWQ         Q  QQQQQ                         GF  S GD    RS
Sbjct: 61  ELWQSGNTPQHQHQHHQQQQQFRHPIYPLQDLYSTDVGLGVGPSRSGFDISAGDHEASRS 120

Query: 121 SLLMTRSGRGGGGQVMSCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRR 180
             +M RSG GG    +SCQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPA+KRR
Sbjct: 121 GFVMMRSGGGG----ISCQDCGNQAKKDCQHMRCRTCCKSRGFQCQTHVKSTWVPAAKRR 180

Query: 181 ERQL-----------HSDGSN---PKRPRDNHAASS-----------GLEMGNFPVEVSS 240
           ERQ            H++ +N    KR R++ +ASS           GLE+G FP +V +
Sbjct: 181 ERQQQLAALQQQQQGHNNNNNNHKNKRQREDPSASSLVSTRLPSNTNGLEVGKFPSKVRT 240

Query: 241 TAVFRCVRITTLDETNDEYAYQTAVNIGGHIFKGILHDHGPE-----RLPPHNSTSPDG- 275
           +AVF+C++++++++  D+ AYQ AV+IGGH+FKGIL+D G E      +     TS  G 
Sbjct: 241 SAVFQCIQMSSIEDDEDQLAYQAAVSIGGHVFKGILYDQGHESQYNNMVAAGGDTSSGGS 300

[Close]

BLAST of Tan0001260 vs. ExPASy Swiss-Prot
Match: Q9LQZ5 (Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.0e-44
Identity = 145/353 (41.08%), Postives = 177/353 (50.14%), Query Frame = 0


Query: 1   MAGFFPLGGGRGPNYHLPSSTSTGGGEIIHPTDG---LFWYK-----NYESFELW----- 60
           MAGFF L GGR  N +          +  H  D    L+ YK     N + FE+W     
Sbjct: 1   MAGFFYL-GGRDNNSNNNKQDHHQVDKDHHHQDKSNYLYLYKDEIYNNNKGFEIWPPQYF 60

Query: 61  -----QQQQQQQQQGG------------EGFGYSGDESPPRSSLLMTRSGRGGGGQV--- 120
                QQQQQQQQ                G   + + +  RS      S    GG     
Sbjct: 61  QQQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHEPGGFTVTR 120

Query: 121 ---MSCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRER-------QLH 180
              M+CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPA+KRRER       Q H
Sbjct: 121 QGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQHH 180

Query: 181 SDGS----NPKRPRD--------------------------NHAASSGLEMG-NFPVEVS 240
           S  S    N KR R+                          N  ++SGLE+  + P EV+
Sbjct: 181 SASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLPPEVN 240

Query: 241 STAVFRCVRITTLDETNDE--YAYQTAVNIGGHIFKGILHDHGPERLPPHNSTSPDGGAL 275
           S A+FRCVR+++++E  D+  YAYQTAVNIGGHIFKGIL+D GPE    H+        L
Sbjct: 241 SPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHHL-----NLL 300

[Close]

BLAST of Tan0001260 vs. ExPASy Swiss-Prot
Match: Q9FXH7 (Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.4e-43
Identity = 124/307 (40.39%), Postives = 157/307 (51.14%), Query Frame = 0


Query: 38  YKNYESFELWQQQ--QQQQQQ-----------------GGE-----------GFGYSGDE 97
           Y N + FE++  Q  QQQQQQ                 GG             F    D 
Sbjct: 40  YNNNKGFEIFPPQYFQQQQQQNHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDH 99

Query: 98  SPPRSS---LLMTRSGRGGGGQVMSCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKST 157
            P RSS     +TR G       M+CQDCGNQAKKDC HMRCRTCCKSRGFDC+THVKST
Sbjct: 100 EPVRSSTGGFTVTRQGN------MNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKST 159

Query: 158 WVPASKRRERQLHSDGSNPKRPRDN---------------------------------HA 217
           WV A+KRRERQ        KR RD                                  +A
Sbjct: 160 WVSAAKRRERQAQLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNA 219

Query: 218 ASSGLEMGNFPVEVSSTAVFRCVRITTLDETNDEYAYQTAVNIGGHIFKGILHDHGPERL 270
           +SSGLE  + P E+SS AVFRC+R++++D+ ++EYAYQTAV+IGGH+FKGIL+D GP   
Sbjct: 220 SSSGLETSHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSD 279

[Close]

BLAST of Tan0001260 vs. NCBI nr
Match: KAG7031235.1 (Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 444.1 bits (1141), Expect = 8.6e-121
Identity = 224/280 (80.00%), Postives = 241/280 (86.07%), Query Frame = 0


Query: 1   MAGFFPLGGGRGPNYHLPSSTSTGGGEIIHPTDGLFWYKNYESFELWQQQQQQQQQGGEG 60
           MAGF+PLGGGR PNYHLP++T+T        TDGLFWY+NYES E+W QQQQ QQQ GEG
Sbjct: 1   MAGFYPLGGGREPNYHLPTTTTT-------TTDGLFWYRNYESLEIW-QQQQVQQQAGEG 60

Query: 61  FGYSGDESPPRSSLLMTRSGRGGGGQVMSCQDCGNQAKKDCLHMRCRTCCKSRGFDCETH 120
           F YSGDESPPRSSL+M RSGR GGGQV+SCQDCGNQAKKDCLHMRCRTCCKSRGFDCETH
Sbjct: 61  FVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETH 120

Query: 121 VKSTWVPASKRRERQLHSDGSNPKRPRDNHAASSGLEMGNFPVEVSSTAVFRCVRITTLD 180
           VKSTWVPASKRRER L SDG+N KRPRDN AASSGLEMGNFPVEVSSTAVFRCVR+TTLD
Sbjct: 121 VKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLD 180

Query: 181 ETNDEYAYQTAVNIGGHIFKGILHDHGPERL------PPHNSTSPDGGALLITAPSTAAI 240
           ETND++AYQTAVNIGGH FKGIL+DHGPE+       PP NS SPDGG LLITAPS    
Sbjct: 181 ETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPS---- 240

Query: 241 PTAVESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS 275
            T +E PPISAALLDPPPPYP PL+TY+AAGTQFFLPPTS
Sbjct: 241 -TTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS 267

[Close]

BLAST of Tan0001260 vs. NCBI nr
Match: XP_022942307.1 (protein SHORT INTERNODES-like [Cucurbita moschata] >XP_022942308.1 protein SHORT INTERNODES-like [Cucurbita moschata])

HSP 1 Score: 441.4 bits (1134), Expect = 5.6e-120
Identity = 224/279 (80.29%), Postives = 240/279 (86.02%), Query Frame = 0


Query: 1   MAGFFPLGGGRGPNYHLPSSTSTGGGEIIHPTDGLFWYKNYESFELWQQQQQQQQQGGEG 60
           MAGFFPLGGGR PNYHLP++T+T        TDGLFWY+NYES  +W QQQQ QQQ GEG
Sbjct: 1   MAGFFPLGGGREPNYHLPTTTTT-------TTDGLFWYRNYESLGIW-QQQQVQQQAGEG 60

Query: 61  FGYSGDESPPRSSLLMTRSGRGGGGQVMSCQDCGNQAKKDCLHMRCRTCCKSRGFDCETH 120
           F YSGDESPPRSSL+M RSGR GGGQV+SCQDCGNQAKKDCLHMRCRTCCKSRGFDCETH
Sbjct: 61  FVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETH 120

Query: 121 VKSTWVPASKRRERQLHSDGSNPKRPRDNHAASSGLEMGNFPVEVSSTAVFRCVRITTLD 180
           VKSTWVPASKRRER L SDG+N KRPRDN AASSGLEM NFPVEVSSTAVFRCVR+TTLD
Sbjct: 121 VKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMRNFPVEVSSTAVFRCVRMTTLD 180

Query: 181 ETNDEYAYQTAVNIGGHIFKGILHDHGPERL-----PPHNSTSPDGGALLITAPSTAAIP 240
           ETND++AYQTAVNIGGH FKGIL+DHGPE+      PP NS SPDGGALLITAPS     
Sbjct: 181 ETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPNSASPDGGALLITAPS----- 240

Query: 241 TAVESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS 275
           T +E PPISAALLDPPPPYP PL+TY+AAGTQFFLPPTS
Sbjct: 241 TTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS 266

[Close]

BLAST of Tan0001260 vs. NCBI nr
Match: XP_023552309.1 (protein SHI RELATED SEQUENCE 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 438.0 bits (1125), Expect = 6.2e-119
Identity = 222/280 (79.29%), Postives = 239/280 (85.36%), Query Frame = 0


Query: 1   MAGFFPLGGGRGPNYHLPSSTSTGGGEIIHPTDGLFWYKNYESFELWQQQQQQQQQGGEG 60
           MAGF+PLGGGR PNYHLP++T+T        TDGLFWY+NYES  +W QQQQ QQQ GEG
Sbjct: 1   MAGFYPLGGGREPNYHLPTTTTT------TITDGLFWYRNYESLGIW-QQQQVQQQAGEG 60

Query: 61  FGYSGDESPPRSSLLMTRSGRGGGGQVMSCQDCGNQAKKDCLHMRCRTCCKSRGFDCETH 120
           F YSGDESPPRSSL+M RSGR GGGQV+SCQDCGNQAKKDCLHMRCRTCCKSRGFDCETH
Sbjct: 61  FVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETH 120

Query: 121 VKSTWVPASKRRERQLHSDGSNPKRPRDNHAASSGLEMGNFPVEVSSTAVFRCVRITTLD 180
           VKSTWVPASKRRER L SDG+N KRPRDN AASSGLEMGN PVEVSSTAVFRCVR+TTLD
Sbjct: 121 VKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNLPVEVSSTAVFRCVRMTTLD 180

Query: 181 ETNDEYAYQTAVNIGGHIFKGILHDHGPERL------PPHNSTSPDGGALLITAPSTAAI 240
           ETND++AYQTAVNIGGH FKGIL+DHGPE+       PP NS SPDGGALLITAPS    
Sbjct: 181 ETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGALLITAPS---- 240

Query: 241 PTAVESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS 275
            T +E PPIS ALLDPPPPYP PL+TY+AAGTQFFLPPTS
Sbjct: 241 -TTMELPPISTALLDPPPPYPAPLNTYVAAGTQFFLPPTS 268

[Close]

BLAST of Tan0001260 vs. NCBI nr
Match: XP_022982329.1 (protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima] >XP_022982338.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima])

HSP 1 Score: 438.0 bits (1125), Expect = 6.2e-119
Identity = 221/278 (79.50%), Postives = 239/278 (85.97%), Query Frame = 0


Query: 1   MAGFFPLGGGRGPNYHLPSSTSTGGGEIIHPTDGLFWYKNYESFELWQQQQQQQQQGGEG 60
           MAGFFPLGGGR PNYHLP++T+         TDGLFWY+NYES  +W QQQQ QQQ GEG
Sbjct: 1   MAGFFPLGGGREPNYHLPTTTT---------TDGLFWYRNYESLGIW-QQQQVQQQAGEG 60

Query: 61  FGYSGDESPPRSSLLMTRSGRGGGGQVMSCQDCGNQAKKDCLHMRCRTCCKSRGFDCETH 120
           F YSGDESPPRSSL+M RSGR GGGQV+SCQDCGNQAKKDCLHMRCRTCCKSRGFDCETH
Sbjct: 61  FVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETH 120

Query: 121 VKSTWVPASKRRERQLHSDGSNPKRPRDNHAASSGLEMGNFPVEVSSTAVFRCVRITTLD 180
           VKSTWVPASKRRER L SD +N KRPRDN AASSGLEMGNFP+EVSSTAVFRCVR+TTLD
Sbjct: 121 VKSTWVPASKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLD 180

Query: 181 ETNDEYAYQTAVNIGGHIFKGILHDHGPERL----PPHNSTSPDGGALLITAPSTAAIPT 240
           ETND++AYQTAVNIGGH FKGIL+DHGPE+     PP NS SPDGGALLITAP+     T
Sbjct: 181 ETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGALLITAPT-----T 240

Query: 241 AVESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS 275
            +E PPISAALLDPPPPYP PL+TY+AAGTQFFLPPTS
Sbjct: 241 TMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS 263

[Close]

BLAST of Tan0001260 vs. NCBI nr
Match: XP_023552316.1 (protein SHI RELATED SEQUENCE 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 429.1 bits (1102), Expect = 2.9e-116
Identity = 220/280 (78.57%), Postives = 237/280 (84.64%), Query Frame = 0


Query: 1   MAGFFPLGGGRGPNYHLPSSTSTGGGEIIHPTDGLFWYKNYESFELWQQQQQQQQQGGEG 60
           MAGF+PLGGGR PNYHLP++T+T        TDGLFWY+NYES  +W QQQQ QQQ GEG
Sbjct: 1   MAGFYPLGGGREPNYHLPTTTTT------TITDGLFWYRNYESLGIW-QQQQVQQQAGEG 60

Query: 61  FGYSGDESPPRSSLLMTRSGRGGGGQVMSCQDCGNQAKKDCLHMRCRTCCKSRGFDCETH 120
           F YSGDESPPRSSL+M RSGR GGGQV+SCQDCGNQAKKDCLHMRCRTCCKSRGFDCETH
Sbjct: 61  FVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETH 120

Query: 121 VKSTWVPASKRRERQLHSDGSNPKRPRDNHAASSGLEMGNFPVEVSSTAVFRCVRITTLD 180
           VKSTWVPASKRRER L SDG+N KRPRDN AASS  EMGN PVEVSSTAVFRCVR+TTLD
Sbjct: 121 VKSTWVPASKRRERHLRSDGTNLKRPRDNTAASS--EMGNLPVEVSSTAVFRCVRMTTLD 180

Query: 181 ETNDEYAYQTAVNIGGHIFKGILHDHGPERL------PPHNSTSPDGGALLITAPSTAAI 240
           ETND++AYQTAVNIGGH FKGIL+DHGPE+       PP NS SPDGGALLITAPS    
Sbjct: 181 ETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGALLITAPS---- 240

Query: 241 PTAVESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS 275
            T +E PPIS ALLDPPPPYP PL+TY+AAGTQFFLPPTS
Sbjct: 241 -TTMELPPISTALLDPPPPYPAPLNTYVAAGTQFFLPPTS 266

[Close]

BLAST of Tan0001260 vs. ExPASy TrEMBL
Match: A0A6J1FUH1 (protein SHORT INTERNODES-like OS=Cucurbita moschata OX=3662 GN=LOC111447394 PE=3 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 2.7e-120
Identity = 224/279 (80.29%), Postives = 240/279 (86.02%), Query Frame = 0


Query: 1   MAGFFPLGGGRGPNYHLPSSTSTGGGEIIHPTDGLFWYKNYESFELWQQQQQQQQQGGEG 60
           MAGFFPLGGGR PNYHLP++T+T        TDGLFWY+NYES  +W QQQQ QQQ GEG
Sbjct: 1   MAGFFPLGGGREPNYHLPTTTTT-------TTDGLFWYRNYESLGIW-QQQQVQQQAGEG 60

Query: 61  FGYSGDESPPRSSLLMTRSGRGGGGQVMSCQDCGNQAKKDCLHMRCRTCCKSRGFDCETH 120
           F YSGDESPPRSSL+M RSGR GGGQV+SCQDCGNQAKKDCLHMRCRTCCKSRGFDCETH
Sbjct: 61  FVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETH 120

Query: 121 VKSTWVPASKRRERQLHSDGSNPKRPRDNHAASSGLEMGNFPVEVSSTAVFRCVRITTLD 180
           VKSTWVPASKRRER L SDG+N KRPRDN AASSGLEM NFPVEVSSTAVFRCVR+TTLD
Sbjct: 121 VKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMRNFPVEVSSTAVFRCVRMTTLD 180

Query: 181 ETNDEYAYQTAVNIGGHIFKGILHDHGPERL-----PPHNSTSPDGGALLITAPSTAAIP 240
           ETND++AYQTAVNIGGH FKGIL+DHGPE+      PP NS SPDGGALLITAPS     
Sbjct: 181 ETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPNSASPDGGALLITAPS----- 240

Query: 241 TAVESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS 275
           T +E PPISAALLDPPPPYP PL+TY+AAGTQFFLPPTS
Sbjct: 241 TTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS 266

[Close]

BLAST of Tan0001260 vs. ExPASy TrEMBL
Match: A0A6J1J480 (protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481193 PE=3 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 3.0e-119
Identity = 221/278 (79.50%), Postives = 239/278 (85.97%), Query Frame = 0


Query: 1   MAGFFPLGGGRGPNYHLPSSTSTGGGEIIHPTDGLFWYKNYESFELWQQQQQQQQQGGEG 60
           MAGFFPLGGGR PNYHLP++T+         TDGLFWY+NYES  +W QQQQ QQQ GEG
Sbjct: 1   MAGFFPLGGGREPNYHLPTTTT---------TDGLFWYRNYESLGIW-QQQQVQQQAGEG 60

Query: 61  FGYSGDESPPRSSLLMTRSGRGGGGQVMSCQDCGNQAKKDCLHMRCRTCCKSRGFDCETH 120
           F YSGDESPPRSSL+M RSGR GGGQV+SCQDCGNQAKKDCLHMRCRTCCKSRGFDCETH
Sbjct: 61  FVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETH 120

Query: 121 VKSTWVPASKRRERQLHSDGSNPKRPRDNHAASSGLEMGNFPVEVSSTAVFRCVRITTLD 180
           VKSTWVPASKRRER L SD +N KRPRDN AASSGLEMGNFP+EVSSTAVFRCVR+TTLD
Sbjct: 121 VKSTWVPASKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLD 180

Query: 181 ETNDEYAYQTAVNIGGHIFKGILHDHGPERL----PPHNSTSPDGGALLITAPSTAAIPT 240
           ETND++AYQTAVNIGGH FKGIL+DHGPE+     PP NS SPDGGALLITAP+     T
Sbjct: 181 ETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGALLITAPT-----T 240

Query: 241 AVESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS 275
            +E PPISAALLDPPPPYP PL+TY+AAGTQFFLPPTS
Sbjct: 241 TMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS 263

[Close]

BLAST of Tan0001260 vs. ExPASy TrEMBL
Match: A0A0A0KUG2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G043960 PE=3 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 9.1e-100
Identity = 201/290 (69.31%), Postives = 219/290 (75.52%), Query Frame = 0


Query: 1   MAGFFPL----GGGRGPNYHLPSSTSTGGGEIIHP-TDGLFWYKNYESFELW----QQQQ 60
           MAGFFPL     GGR PNYH P  T T GGEIIHP T+GLFWYKNYE  E W    QQQQ
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFP--TPTTGGEIIHPTTEGLFWYKNYERLETWEGEEQQQQ 60

Query: 61  QQ--QQQGGEGFGYSGDESPPRSSLLMTRSGR---GGGGQVMSCQDCGNQAKKDCLHMRC 120
           QQ  Q+QGGEGF YSGDESP RSSL+M RSGR   GGGG V SCQDCGNQAKKDC+HMRC
Sbjct: 61  QQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGGGGGPVTSCQDCGNQAKKDCVHMRC 120

Query: 121 RTCCKSRGFDCETHVKSTWVPASKRRERQLHSDGSNPKRPRDN--HAASSGLEMGNFPVE 180
           RTCCKSRGF+CETHVKSTWVPASKRR+R L SDG N KRP+D   H  SSGL+MGNFP E
Sbjct: 121 RTCCKSRGFECETHVKSTWVPASKRRDRHLRSDGLNSKRPKDTHYHPTSSGLDMGNFPTE 180

Query: 181 VSSTAVFRCVRITTLDETNDEYAYQTAVNIGGHIFKGILHDHGPERLPPHNSTSPDGGAL 240
           V++ AVFRCVR+T+LDET+D+YAYQTAVNIGG IFKGIL+DHGPE+ PP  S+S      
Sbjct: 181 VTTPAVFRCVRMTSLDETDDQYAYQTAVNIGGRIFKGILYDHGPEQPPPPPSSS------ 240

Query: 241 LITAPSTAAIPTAVESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS 275
                              SAALLDP PPYPTPLSTYI AGTQFFLPP+S
Sbjct: 241 -------------------SAALLDPTPPYPTPLSTYITAGTQFFLPPSS 263

[Close]

BLAST of Tan0001260 vs. ExPASy TrEMBL
Match: A0A6J1J673 (protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111482954 PE=3 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 7.7e-99
Identity = 195/281 (69.40%), Postives = 214/281 (76.16%), Query Frame = 0


Query: 1   MAGFFPLGGGRGPNYHLPSSTSTGGGEIIHPTDGLFWYKNYESFELWQQQQQQQQQGGEG 60
           MAGFFPLGGG G          + GGEIIHPTDGL WYKNYESFE      +QQQQGGE 
Sbjct: 1   MAGFFPLGGGGG---------GSSGGEIIHPTDGLLWYKNYESFE-----TEQQQQGGER 60

Query: 61  FGYSGDESPPRSSLLMTRS-GRGGGGQVMSCQDCGNQAKKDCLHMRCRTCCKSRGFDCET 120
           FGYSG+ SP RSSL+M RS G GGGG+V+SCQDCGNQAKKDC+HMRCRTCCKSRGF CET
Sbjct: 61  FGYSGENSPARSSLVMVRSGGDGGGGKVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCET 120

Query: 121 HVKSTWVPASKRRERQLHSDGSNPKRPRDNHAASSGLEMGNFPVEVSSTAVFRCVRITTL 180
           HVKSTWVPASKRRER + + G + KRPRD HA SSG E+GNFP E++STAVFRCVR+TTL
Sbjct: 121 HVKSTWVPASKRRERLISTTGGDSKRPRDTHATSSGFEIGNFPAEINSTAVFRCVRMTTL 180

Query: 181 DET--NDEYAYQTAVNIGGHIFKGILHDHGPERLPPHN----STSPDGGALLITAPSTAA 240
           DE    D+YAYQTAVNIGGHIFKGILHDHGP++   H+    S SPDGGALLIT      
Sbjct: 181 DEPTGTDQYAYQTAVNIGGHIFKGILHDHGPDQQQHHHNPPISASPDGGALLITTAD--- 240

Query: 241 IPTAVESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS 275
                     SAALLDPPP YP PLS+YI AGTQFF PPTS
Sbjct: 241 ----------SAALLDPPPSYPAPLSSYITAGTQFFQPPTS 254

[Close]

BLAST of Tan0001260 vs. ExPASy TrEMBL
Match: A0A5A7TNR6 (Protein SHI RELATED SEQUENCE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005220 PE=3 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.7e-98
Identity = 198/291 (68.04%), Postives = 216/291 (74.23%), Query Frame = 0


Query: 1   MAGFFPL----GGGRGPNYHLPSSTSTGGGEIIHP-TDGLFWYKNYESFELW-------Q 60
           MAGFFPL     GGR PNYH P  T T GGEIIHP T+GLFWYKNYE  E W       Q
Sbjct: 1   MAGFFPLDGGGSGGRVPNYHFP--TPTTGGEIIHPTTEGLFWYKNYERLETWEGEEEHQQ 60

Query: 61  QQQQQQQQGGEGFGYSGDESPPRSSLLMTRSGRG---GGGQVMSCQDCGNQAKKDCLHMR 120
           QQQ  Q+QGGEGF YSGDESP RSSL+M RSGRG   GGG V SCQDCGNQAKKDC HMR
Sbjct: 61  QQQPAQEQGGEGFVYSGDESPARSSLVMVRSGRGGGSGGGPVTSCQDCGNQAKKDCAHMR 120

Query: 121 CRTCCKSRGFDCETHVKSTWVPASKRRERQLHSDGSNPKRPRDN--HAASSGLEMGNFPV 180
           CRTCCKSRGF+CETHVKSTWVPASKRR+R L SDG N KRP+D   H  SSGL+M NFP+
Sbjct: 121 CRTCCKSRGFECETHVKSTWVPASKRRDRLLRSDGLNSKRPKDTHYHPTSSGLDMANFPM 180

Query: 181 EVSSTAVFRCVRITTLDETNDEYAYQTAVNIGGHIFKGILHDHGPERLPPHNSTSPDGGA 240
           EV++ AVFRCVR+TTLDET+D+YAYQTAVNIGGHIFKGIL+DHGPE+ PP  S+S     
Sbjct: 181 EVTTPAVFRCVRMTTLDETDDQYAYQTAVNIGGHIFKGILYDHGPEQPPPPPSSSS---- 240

Query: 241 LLITAPSTAAIPTAVESPPISAALLDPPPPYPTPLSTYIAAGTQFFLPPTS 275
                               +AALLD  PPYPTPLSTYI AGTQFFLPP+S
Sbjct: 241 --------------------AAALLDSTPPYPTPLSTYITAGTQFFLPPSS 265

[Close]

BLAST of Tan0001260 vs. TAIR 10
Match: AT3G51060.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 204.1 bits (518), Expect = 1.4e-52
Identity = 156/374 (41.71%), Postives = 196/374 (52.41%), Query Frame = 0


Query: 1   MAGFFPL-----GGGRGPNYHLPSSTSTGGGEIIHPTDGLFWYKN--------------- 60
           MAGFF L     GGG G N      ++T     +  ++   WY+N               
Sbjct: 1   MAGFFSLDGGGGGGGGGGNNQEDHRSNTNPPPPV--SEAWLWYRNPNVNANANTNVNANA 60

Query: 61  -------YESFELWQ---------QQQQQQQQ-------GGEG--------FGYSGDESP 120
                    + ELWQ         Q QQ QQ+        G G        F  SG+ S 
Sbjct: 61  PSSSNAALGTLELWQNHNQQEIMFQHQQHQQRLDLYSSAAGLGVGPSNHNQFDISGETST 120

Query: 121 P----RSSLLMTRSGRGGGGQ-VMSCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKST 180
                 ++++M RSG  GGG   +SCQDCGNQAKKDC HMRCRTCCKSRGF+C THV+ST
Sbjct: 121 AGAGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRST 180

Query: 181 WVPASKRRER-----------QLHSDGSNPKRPRDNHAAS------------SGLEMGNF 240
           WVPA+KRRER           QL    S PKR R+N  A+            SGLE+GNF
Sbjct: 181 WVPAAKRRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNF 240

Query: 241 PVEVSSTAVFRCVRITTLDETNDEYAYQTAVNIGGHIFKGILHDHGP--------ERLPP 275
           P EVSS+AVFRCVR++++++  +E+AYQTAV+IGGHIFKGIL+D GP          +  
Sbjct: 241 PAEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVAA 300

[Close]

BLAST of Tan0001260 vs. TAIR 10
Match: AT5G66350.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 203.4 bits (516), Expect = 2.4e-52
Identity = 147/332 (44.28%), Postives = 178/332 (53.61%), Query Frame = 0


Query: 1   MAGFFPLGGGRGPNYHLPSSTSTGGGEIIHPTDGLFWYKNYES--------------FEL 60
           MAGFF LG G G N      T+T        T+   W +N  S               EL
Sbjct: 1   MAGFFSLGHGGGGNTPDNHRTNTNNPS-SSGTESWLWCRNPNSNADGGEAGPSYKGTLEL 60

Query: 61  WQ---------QQQQQQQQ--------GGEGFGYSGDESPPRS--SLLMTRSGRGGGGQV 120
           WQ         QQQQQQQQ         G G G S       S  +L+M RSG G GG  
Sbjct: 61  WQHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSGSGGP- 120

Query: 121 MSCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERQLHSD-------- 180
            SCQDCGNQ+KKDC HMRCRTCCKSRG DC THVKSTWVPA+KRRERQ            
Sbjct: 121 -SCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQL 180

Query: 181 -GSNPKRPRDNHAA--------------SSGLEMGNFPVEVSSTAVFRCVRITTLDETND 240
            GS PKR R+   A              +SGLE+GNFP EVSS+AVFRCVR++++D+  +
Sbjct: 181 GGSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSVDDEEE 240

Query: 241 EYAYQTAVNIGGHIFKGILHDHGP-ERLPPHNSTSPDGGALLITAPSTAAIPTAVES--- 270
           EYAY+TAV+IGGH+FKG+L+D GP ER      + P    L+   PS ++    V     
Sbjct: 241 EYAYKTAVSIGGHVFKGVLYDQGPAERSSSGGGSQPLN--LITAGPSASSSSPNVSCNNG 300

[Close]

BLAST of Tan0001260 vs. TAIR 10
Match: AT1G75520.1 (SHI-related sequence 5 )

HSP 1 Score: 180.3 bits (456), Expect = 2.2e-45
Identity = 145/353 (41.08%), Postives = 177/353 (50.14%), Query Frame = 0


Query: 1   MAGFFPLGGGRGPNYHLPSSTSTGGGEIIHPTDG---LFWYK-----NYESFELW----- 60
           MAGFF L GGR  N +          +  H  D    L+ YK     N + FE+W     
Sbjct: 1   MAGFFYL-GGRDNNSNNNKQDHHQVDKDHHHQDKSNYLYLYKDEIYNNNKGFEIWPPQYF 60

Query: 61  -----QQQQQQQQQGG------------EGFGYSGDESPPRSSLLMTRSGRGGGGQV--- 120
                QQQQQQQQ                G   + + +  RS      S    GG     
Sbjct: 61  QQQEHQQQQQQQQHASAPANFYSFGMVPSGSSSNNNNNRSRSLYFNVVSDHEPGGFTVTR 120

Query: 121 ---MSCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRER-------QLH 180
              M+CQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPA+KRRER       Q H
Sbjct: 121 QGGMNCQDCGNQAKKDCPHMRCRTCCKSRGFHCQTHVKSTWVPAAKRRERLAQLASLQHH 180

Query: 181 SDGS----NPKRPRD--------------------------NHAASSGLEMG-NFPVEVS 240
           S  S    N KR R+                          N  ++SGLE+  + P EV+
Sbjct: 181 SASSRETQNAKRLREASGGDNNDDKDHSGGGGSALANTRVVNANSNSGLEVSQHLPPEVN 240

Query: 241 STAVFRCVRITTLDETNDE--YAYQTAVNIGGHIFKGILHDHGPERLPPHNSTSPDGGAL 275
           S A+FRCVR+++++E  D+  YAYQTAVNIGGHIFKGIL+D GPE    H+        L
Sbjct: 241 SPAIFRCVRVSSIEEDEDDQAYAYQTAVNIGGHIFKGILYDQGPEHQDNHHL-----NLL 300

[Close]

BLAST of Tan0001260 vs. TAIR 10
Match: AT1G19790.1 (SHI-related sequence 7 )

HSP 1 Score: 176.8 bits (447), Expect = 2.4e-44
Identity = 124/307 (40.39%), Postives = 157/307 (51.14%), Query Frame = 0


Query: 38  YKNYESFELWQQQ--QQQQQQ-----------------GGE-----------GFGYSGDE 97
           Y N + FE++  Q  QQQQQQ                 GG             F    D 
Sbjct: 40  YNNNKGFEIFPPQYFQQQQQQNHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDH 99

Query: 98  SPPRSS---LLMTRSGRGGGGQVMSCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKST 157
            P RSS     +TR G       M+CQDCGNQAKKDC HMRCRTCCKSRGFDC+THVKST
Sbjct: 100 EPVRSSTGGFTVTRQGN------MNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKST 159

Query: 158 WVPASKRRERQLHSDGSNPKRPRDN---------------------------------HA 217
           WV A+KRRERQ        KR RD                                  +A
Sbjct: 160 WVSAAKRRERQAQLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNA 219

Query: 218 ASSGLEMGNFPVEVSSTAVFRCVRITTLDETNDEYAYQTAVNIGGHIFKGILHDHGPERL 270
           +SSGLE  + P E+SS AVFRC+R++++D+ ++EYAYQTAV+IGGH+FKGIL+D GP   
Sbjct: 220 SSSGLETSHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSD 279

[Close]

BLAST of Tan0001260 vs. TAIR 10
Match: AT1G19790.2 (SHI-related sequence 7 )

HSP 1 Score: 176.8 bits (447), Expect = 2.4e-44
Identity = 124/307 (40.39%), Postives = 157/307 (51.14%), Query Frame = 0


Query: 38  YKNYESFELWQQQ--QQQQQQ-----------------GGE-----------GFGYSGDE 97
           Y N + FE++  Q  QQQQQQ                 GG             F    D 
Sbjct: 40  YNNNKGFEIFPPQYFQQQQQQNHAAAPTNLYSFGMVPSGGNINNNRSTNRSLYFNVVSDH 99

Query: 98  SPPRSS---LLMTRSGRGGGGQVMSCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKST 157
            P RSS     +TR G       M+CQDCGNQAKKDC HMRCRTCCKSRGFDC+THVKST
Sbjct: 100 EPVRSSTGGFTVTRQGN------MNCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKST 159

Query: 158 WVPASKRRERQLHSDGSNPKRPRDN---------------------------------HA 217
           WV A+KRRERQ        KR RD                                  +A
Sbjct: 160 WVSAAKRRERQAQLAVLPAKRIRDANSRGGGDDDDDDKEDEKNDSCGGGSALACTRVVNA 219

Query: 218 ASSGLEMGNFPVEVSSTAVFRCVRITTLDETNDEYAYQTAVNIGGHIFKGILHDHGPERL 270
           +SSGLE  + P E+SS AVFRC+R++++D+ ++EYAYQTAV+IGGH+FKGIL+D GP   
Sbjct: 220 SSSGLETSHLPPEISSPAVFRCMRVSSIDDEDEEYAYQTAVSIGGHVFKGILYDQGPSSD 279

The following BLAST results are available for this feature:

BLAST of Tan0001260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SD40	2.0e-51	41.71	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2	[more]
Q9XGX0	3.4e-51	44.28	Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1	[more]
K4B6C9	1.8e-49	39.83	Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 ...	[more]
Q9LQZ5	3.0e-44	41.08	Protein SHI RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=SRS5 PE=1 SV=1	[more]
Q9FXH7	3.4e-43	40.39	Protein SHI RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=SRS7 PE=1 SV=1	[more]

BLAST of Tan0001260 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031235.1	8.6e-121	80.00	Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022942307.1	5.6e-120	80.29	protein SHORT INTERNODES-like [Cucurbita moschata] >XP_022942308.1 protein SHORT...	[more]
XP_023552309.1	6.2e-119	79.29	protein SHI RELATED SEQUENCE 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022982329.1	6.2e-119	79.50	protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima] >XP_022982338.1 protein S...	[more]
XP_023552316.1	2.9e-116	78.57	protein SHI RELATED SEQUENCE 1-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0001260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FUH1	2.7e-120	80.29	protein SHORT INTERNODES-like OS=Cucurbita moschata OX=3662 GN=LOC111447394 PE=3...	[more]
A0A6J1J480	3.0e-119	79.50	protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481193 ...	[more]
A0A0A0KUG2	9.1e-100	69.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G043960 PE=3 SV=1	[more]
A0A6J1J673	7.7e-99	69.40	protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111482954 ...	[more]
A0A5A7TNR6	1.7e-98	68.04	Protein SHI RELATED SEQUENCE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of Tan0001260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51060.1	1.4e-52	41.71	Lateral root primordium (LRP) protein-related	[more]
AT5G66350.1	2.4e-52	44.28	Lateral root primordium (LRP) protein-related	[more]
AT1G75520.1	2.2e-45	41.08	SHI-related sequence 5	[more]
AT1G19790.1	2.4e-44	40.39	SHI-related sequence 7	[more]
AT1G19790.2	2.4e-44	40.39	SHI-related sequence 7	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF05142	DUF702	coord: 88..209 e-value: 8.5E-53 score: 178.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..159
None	No IPR available	PANTHER	PTHR31604:SF4	PROTEIN SHORT INTERNODES	coord: 1..270
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAM	TIGR01623	TIGR01623	coord: 89..131 e-value: 4.0E-28 score: 95.1
IPR006511	SHORT INTERNODES, C-terminal	TIGRFAM	TIGR01624	TIGR01624	coord: 161..208 e-value: 1.2E-24 score: 84.0
IPR007818	SHI protein family	PANTHER	PTHR31604	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 1..270

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0001260.1	Tan0001260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0009851	auxin biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding