Tan0001142 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGACGCCCAGAAGTTTACTTATTTAAGCCTTGCAAAACATGCCAATGTCTCTCTCTGTATTTGCGTATTGAATTTTAATTCGAACCAATATTCTCCTTCTTCCCCCATTTCTCTCTCCCTCAAGGAGTGTCCTTAAAGGAAAGAAGATAATTGGGTGGTAAGGTAATGGAGTTGTAAAATTGATTTCTGTTTGTTTTTCCCCTCTCTCTTTCTTTTTCTTCTTCGGTTCTTCCCCTTTCCTTTGGGTTTGTGTTTGTTTCCCGAGAAAACAACCGAAGGGAAAAGGGTTTGTTTAGTTTCAAAGGAAAGGGGAAAAATCTAACACGATAAATGGAGAAGAAAGGGGAAATGAATGTGGTCGGTAACACCGGCAAGTTTCAATTGAGCTTTTGGGAGGTGGGTGTGTTTAGCACTGTTGTCATTGGCTTCCTTTTCGGCCTTCTCTGTGTTTACCTAACCATGCCGGCATCCGATTACAGCTTTCTCAAGCTCCCTCGTAACCTTCAAGATCTTCAAATCCTCAGGTATTTCTCTATTTTGTTTGATTTTGATGCCATAATATTCGATTGGGCTTTGATGATGAATGTGGGAATTGGGATGATGGTGTTTCGTTTGATTCGTTTTTCAAATTCTGTTTTGACTATAATCGCTATACTGGGATTTTTTTCCTGTGATTTGTGAAATTGGGTTTTTCTGAGTTCTTGTTCTTGGAGTTGGACTGGAATGAATCCTCCCCCGCATTTACCCGATGCCTGTAATTTGCGAAGCTTTCAATGTCTTTTGAGTTATTTGCCGTGGATTTTTCTCACGGATTGATCCTTAGGCGTTTGCGTTTTCTCTATAACTTTTGAAGGATTGAGATCTTGCTTGCTGTTGAATTAGTATTTTGAATGGGCACCAAATACTTCTTTAGAGATGTCCTCCAAATTATTTGTATGGTTATTGAAATCGCGAGGAAAGTTCCTATTTCAAGTTTTAGTATCATGACTCTTAGCTTTTGTTTTTGAATAATGATCAGATCTGGCCTCGTTCCTTGGAAAAAGTTTTTATGGGATTCCTATGTGCTCTGATTTTTTTACTTTTGGTTTTGGCTAATGAGATTTGTTACCACTTTCTTGTAGACATGAGGGATTGTTTGCTTTATAATTATTCTTGTGGTACATCAATGATTGAATGTTGGAGGATATGCTTTGTGAGAGCATAATGCAGGATTTTGAGATGTCGTTTTATCATCACAAACATTCTTTATTGGGCAGAAATTTGAAAGCATCTGGATGCTAAAAATCTGGCTAAATACTAAATCAATTAACTTTGAACTGTTAATTTATTGGGATGATAGATATTTTTATTTCATCTTCTGGAAATTTGTTTAAAGCTATCTCCCTTTCTTTTAGAGATCACCTTGAGGAATATACGAGTGACTACACTGCACAGGTCTTGGTGGGATACTGCGTTGTCTACATCTTTATGCAGACCTTCATGATTCCTGGAACTGTTTTCATGTCACTGCTGGCCGGAGCTCTCTTCGGAGTCTTCAAGGGCGTCGCTCTCGTCGTATTCACTGCTACAGCTGGAGCTTCCTCTTGCTATTTCCTGTCGAAGATGATTGGCAAGCCCCTTGCCTTTACTCTTTGGCCCGACAAGGTCAAGTTCTTTCAAGATCAGGTGAGCTTCAGATCCCATCTCTTTTGCTGGTGATTCTGTGAGGTTATGGATGTTGAATTGGCTTGTATTTCCATTCGCTCTCAGGTTTCTAGGAGAAGGGAAGGGCTGTTGAACTACATGCTTTTTCTAAGATTGACTCCAACCTTGCCAAATACGTTCATCAACGTTGCTTCTCCCATAGTTGATGTGCCTTACCATACCTTCTTCCTTGCTACCGTCGTTGGTCTCATCCCGGCTGCCTTCGTCACAGTCAGGGTACTCACTTCTCCATTGCAGTTGTTTTATCTTTGTCGGGTTCCCAACTTATTGTCATGGATAACTAGAGGGGATGACACATTGACCTTGTTACATAGTTCAACGAAATTAATAAATCTATGGAATGCATTAAAGACATAAGTGATTACAGTACAAGACTTCAGCAGGGAAATGTCTAGTTTGCATTTGCACCATTGTTGTACTTGTTCTCCAATACAACATTATAGAAAATCTTTTATGGATTGTTTGGGGTGCTGAGTGGGTTATATTAACAGGGTTATAATAGTCTGTGAAACATATAAGGTTATAATAGTCTGTGAAACATATAATATTATTTAAAATGTAGAGTAGTATAGTCTGTGGTTATAATAGTTTGTGTTTGAGGGCAGATTATTTTATAGGTTATTATAACATGGGTTATAATAACCAGGGGTCAAACAGGTTATGTATCAATGTCTTATGGTTGCTTATCAGCTTATGTATTAATGCTGAATTGTAAACCGAACAACACTAACATCTTGAATTCTATGACAGGCGGGACTGGCGCTTGGAGAATTGCAATCGGTCGGCGATCTTTACGACTTCAACTCAATCGCCACGCTGTTTCTGATTGGAGTTGTCTCAGTCACACCAACTTTAGTTGGCAAGAGTAAATCATAGCATTCTATGGCCTAACTCTTGAGCTTGGATATTTGATTGACTCATTGTCGAATTTGCACCGCCGTTCCCTGTACAGATATAGTGTGATCCCCTGAGCAGCCATTGAAGGTGATGAATATAATGTGGAAGTCGGGTTTGGATGATTGGGAGAAGAAGAGGGTCAGAGTTAGAGGTGATATGATATTAAATTTCGATTCGATCGTCAGTAATCGTTCACTCTCTTATTTGATAATTGTATTTGATTGACCAGAAATCATACAATGGATGATCATATTCATTTGATTGGCCAGCAAAATCATAAAATGGAAGATCTCATATTCATTTGTTGTGAATAATGTGTTACTGTATGTTCTGGGATAATTCAATGCAATCAATTGGACCATTTTGACACGTTCAGTTTTCACACCTGGAATCAATTCTACTTTTTATTTATTTATGTTTTATTTTCCAATTTTCATACCCTG TTGACGCCCAGAAGTTTACTTATTTAAGCCTTGCAAAACATGCCAATGTCTCTCTCTGTATTTGCGTATTGAATTTTAATTCGAACCAATATTCTCCTTCTTCCCCCATTTCTCTCTCCCTCAAGGAGTGTCCTTAAAGGAAAGAAGATAATTGGGTGGTAAGGTAATGGAGTTGTAAAATTGATTTCTGTTTGTTTTTCCCCTCTCTCTTTCTTTTTCTTCTTCGGTTCTTCCCCTTTCCTTTGGGTTTGTGTTTGTTTCCCGAGAAAACAACCGAAGGGAAAAGGGTTTGTTTAGTTTCAAAGGAAAGGGGAAAAATCTAACACGATAAATGGAGAAGAAAGGGGAAATGAATGTGGTCGGTAACACCGGCAAGTTTCAATTGAGCTTTTGGGAGGTGGGTGTGTTTAGCACTGTTGTCATTGGCTTCCTTTTCGGCCTTCTCTGTGTTTACCTAACCATGCCGGCATCCGATTACAGCTTTCTCAAGCTCCCTCGTAACCTTCAAGATCTTCAAATCCTCAGAGATCACCTTGAGGAATATACGAGTGACTACACTGCACAGGTCTTGGTGGGATACTGCGTTGTCTACATCTTTATGCAGACCTTCATGATTCCTGGAACTGTTTTCATGTCACTGCTGGCCGGAGCTCTCTTCGGAGTCTTCAAGGGCGTCGCTCTCGTCGTATTCACTGCTACAGCTGGAGCTTCCTCTTGCTATTTCCTGTCGAAGATGATTGGCAAGCCCCTTGCCTTTACTCTTTGGCCCGACAAGGTCAAGTTCTTTCAAGATCAGGTTTCTAGGAGAAGGGAAGGGCTGTTGAACTACATGCTTTTTCTAAGATTGACTCCAACCTTGCCAAATACGTTCATCAACGTTGCTTCTCCCATAGTTGATGTGCCTTACCATACCTTCTTCCTTGCTACCGTCGTTGGTCTCATCCCGGCTGCCTTCGTCACAGTCAGGGCGGGACTGGCGCTTGGAGAATTGCAATCGGTCGGCGATCTTTACGACTTCAACTCAATCGCCACGCTGTTTCTGATTGGAGTTGTCTCAGTCACACCAACTTTAGTTGGCAAGAGTAAATCATAGCATTCTATGGCCTAACTCTTGAGCTTGGATATTTGATTGACTCATTGTCGAATTTGCACCGCCGTTCCCTGTACAGATATAGTGTGATCCCCTGAGCAGCCATTGAAGGTGATGAATATAATGTGGAAGTCGGGTTTGGATGATTGGGAGAAGAAGAGGGTCAGAGTTAGAGGTGATATGATATTAAATTTCGATTCGATCGTCAGTAATCGTTCACTCTCTTATTTGATAATTGTATTTGATTGACCAGAAATCATACAATGGATGATCATATTCATTTGATTGGCCAGCAAAATCATAAAATGGAAGATCTCATATTCATTTGTTGTGAATAATGTGTTACTGTATGTTCTGGGATAATTCAATGCAATCAATTGGACCATTTTGACACGTTCAGTTTTCACACCTGGAATCAATTCTACTTTTTATTTATTTATGTTTTATTTTCCAATTTTCATACCCTG ATGGAGAAGAAAGGGGAAATGAATGTGGTCGGTAACACCGGCAAGTTTCAATTGAGCTTTTGGGAGGTGGGTGTGTTTAGCACTGTTGTCATTGGCTTCCTTTTCGGCCTTCTCTGTGTTTACCTAACCATGCCGGCATCCGATTACAGCTTTCTCAAGCTCCCTCGTAACCTTCAAGATCTTCAAATCCTCAGAGATCACCTTGAGGAATATACGAGTGACTACACTGCACAGGTCTTGGTGGGATACTGCGTTGTCTACATCTTTATGCAGACCTTCATGATTCCTGGAACTGTTTTCATGTCACTGCTGGCCGGAGCTCTCTTCGGAGTCTTCAAGGGCGTCGCTCTCGTCGTATTCACTGCTACAGCTGGAGCTTCCTCTTGCTATTTCCTGTCGAAGATGATTGGCAAGCCCCTTGCCTTTACTCTTTGGCCCGACAAGGTCAAGTTCTTTCAAGATCAGGTTTCTAGGAGAAGGGAAGGGCTGTTGAACTACATGCTTTTTCTAAGATTGACTCCAACCTTGCCAAATACGTTCATCAACGTTGCTTCTCCCATAGTTGATGTGCCTTACCATACCTTCTTCCTTGCTACCGTCGTTGGTCTCATCCCGGCTGCCTTCGTCACAGTCAGGGCGGGACTGGCGCTTGGAGAATTGCAATCGGTCGGCGATCTTTACGACTTCAACTCAATCGCCACGCTGTTTCTGATTGGAGTTGTCTCAGTCACACCAACTTTAGTTGGCAAGAGTAAATCATAG MEKKGEMNVVGNTGKFQLSFWEVGVFSTVVIGFLFGLLCVYLTMPASDYSFLKLPRNLQDLQILRDHLEEYTSDYTAQVLVGYCVVYIFMQTFMIPGTVFMSLLAGALFGVFKGVALVVFTATAGASSCYFLSKMIGKPLAFTLWPDKVKFFQDQVSRRREGLLNYMLFLRLTPTLPNTFINVASPIVDVPYHTFFLATVVGLIPAAFVTVRAGLALGELQSVGDLYDFNSIATLFLIGVVSVTPTLVGKSKS Homology
BLAST of Tan0001142 vs. ExPASy Swiss-Prot
Match: Q8L586 (Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana OX=3702 GN=At4g09580 PE=1 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 1.4e-83 Identity = 152/255 (59.61%), Postives = 202/255 (79.22%), Query Frame = 0
BLAST of Tan0001142 vs. ExPASy Swiss-Prot
Match: Q8MXN7 (Transmembrane protein 41 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0275543 PE=3 SV=2) HSP 1 Score: 191.8 bits (486), Expect = 9.3e-48 Identity = 97/233 (41.63%), Postives = 152/233 (65.24%), Query Frame = 0
BLAST of Tan0001142 vs. ExPASy Swiss-Prot
Match: Q5ZIL6 (Transmembrane protein 41B OS=Gallus gallus OX=9031 GN=TMEM41B PE=2 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 2.1e-39 Identity = 83/219 (37.90%), Postives = 134/219 (61.19%), Query Frame = 0
BLAST of Tan0001142 vs. ExPASy Swiss-Prot
Match: Q5U4K5 (Transmembrane protein 41B OS=Xenopus laevis OX=8355 GN=tmem41b PE=2 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 2.7e-39 Identity = 80/199 (40.20%), Postives = 127/199 (63.82%), Query Frame = 0
BLAST of Tan0001142 vs. ExPASy Swiss-Prot
Match: Q5BJD5 (Transmembrane protein 41B OS=Homo sapiens OX=9606 GN=TMEM41B PE=1 SV=1) HSP 1 Score: 162.9 bits (411), Expect = 4.6e-39 Identity = 85/229 (37.12%), Postives = 137/229 (59.83%), Query Frame = 0
BLAST of Tan0001142 vs. NCBI nr
Match: XP_004136194.1 (uncharacterized membrane protein At4g09580 [Cucumis sativus] >KGN60367.1 hypothetical protein Csa_001642 [Cucumis sativus]) HSP 1 Score: 471.1 bits (1211), Expect = 6.1e-129 Identity = 241/253 (95.26%), Postives = 248/253 (98.02%), Query Frame = 0
BLAST of Tan0001142 vs. NCBI nr
Match: XP_008465994.1 (PREDICTED: uncharacterized membrane protein At4g09580 [Cucumis melo]) HSP 1 Score: 466.5 bits (1199), Expect = 1.5e-127 Identity = 239/253 (94.47%), Postives = 247/253 (97.63%), Query Frame = 0
BLAST of Tan0001142 vs. NCBI nr
Match: XP_038888473.1 (uncharacterized membrane protein At4g09580 [Benincasa hispida]) HSP 1 Score: 464.5 bits (1194), Expect = 5.7e-127 Identity = 242/254 (95.28%), Postives = 247/254 (97.24%), Query Frame = 0
BLAST of Tan0001142 vs. NCBI nr
Match: XP_023553626.1 (uncharacterized membrane protein At4g09580 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 463.8 bits (1192), Expect = 9.7e-127 Identity = 238/253 (94.07%), Postives = 244/253 (96.44%), Query Frame = 0
BLAST of Tan0001142 vs. NCBI nr
Match: XP_022963764.1 (uncharacterized membrane protein At4g09580 [Cucurbita moschata]) HSP 1 Score: 461.5 bits (1186), Expect = 4.8e-126 Identity = 237/253 (93.68%), Postives = 243/253 (96.05%), Query Frame = 0
BLAST of Tan0001142 vs. ExPASy TrEMBL
Match: A0A0A0LI03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G901130 PE=4 SV=1) HSP 1 Score: 471.1 bits (1211), Expect = 2.9e-129 Identity = 241/253 (95.26%), Postives = 248/253 (98.02%), Query Frame = 0
BLAST of Tan0001142 vs. ExPASy TrEMBL
Match: A0A1S3CQ67 (uncharacterized membrane protein At4g09580 OS=Cucumis melo OX=3656 GN=LOC103503560 PE=4 SV=1) HSP 1 Score: 466.5 bits (1199), Expect = 7.3e-128 Identity = 239/253 (94.47%), Postives = 247/253 (97.63%), Query Frame = 0
BLAST of Tan0001142 vs. ExPASy TrEMBL
Match: A0A6J1HL58 (uncharacterized membrane protein At4g09580 OS=Cucurbita moschata OX=3662 GN=LOC111463958 PE=4 SV=1) HSP 1 Score: 461.5 bits (1186), Expect = 2.3e-126 Identity = 237/253 (93.68%), Postives = 243/253 (96.05%), Query Frame = 0
BLAST of Tan0001142 vs. ExPASy TrEMBL
Match: A0A6J1HU39 (uncharacterized membrane protein At4g09580 OS=Cucurbita maxima OX=3661 GN=LOC111466877 PE=4 SV=1) HSP 1 Score: 460.7 bits (1184), Expect = 4.0e-126 Identity = 236/253 (93.28%), Postives = 243/253 (96.05%), Query Frame = 0
BLAST of Tan0001142 vs. ExPASy TrEMBL
Match: A0A6J1E3I6 (uncharacterized membrane protein At4g09580 OS=Momordica charantia OX=3673 GN=LOC111026149 PE=4 SV=1) HSP 1 Score: 458.0 bits (1177), Expect = 2.6e-125 Identity = 235/253 (92.89%), Postives = 240/253 (94.86%), Query Frame = 0
BLAST of Tan0001142 vs. TAIR 10
Match: AT4G17790.1 (SNARE associated Golgi protein family ) HSP 1 Score: 387.5 bits (994), Expect = 8.2e-108 Identity = 195/238 (81.93%), Postives = 220/238 (92.44%), Query Frame = 0
BLAST of Tan0001142 vs. TAIR 10
Match: AT1G71940.1 (SNARE associated Golgi protein family ) HSP 1 Score: 323.2 bits (827), Expect = 1.9e-88 Identity = 155/238 (65.13%), Postives = 201/238 (84.45%), Query Frame = 0
BLAST of Tan0001142 vs. TAIR 10
Match: AT4G09580.1 (SNARE associated Golgi protein family ) HSP 1 Score: 310.8 bits (795), Expect = 9.8e-85 Identity = 152/255 (59.61%), Postives = 202/255 (79.22%), Query Frame = 0
BLAST of Tan0001142 vs. TAIR 10
Match: AT1G71940.2 (SNARE associated Golgi protein family ) HSP 1 Score: 303.1 bits (775), Expect = 2.0e-82 Identity = 146/217 (67.28%), Postives = 185/217 (85.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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