Tan0001104 (gene) Snake gourd v1

Overview


Name	Tan0001104
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein Iojap, chloroplastic
Location	LG01: 9354951 .. 9360538 (-)
RNA-Seq Expression	Tan0001104
Synteny	Tan0001104

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTGGTTTACAAATATCTTCTCTCACGGTGTACCATTTTTCCTTTCTGCACGAAAGAAGCCAGCATGGCGTTATCCACTATCTTATCTCTACACGGCGCCGGCGAGCTCCGGCAACTGGGTTGTGATTATTTCAGAGTTTCTAAAAAACCCAGAAAGCAATTTTGGTGCTCATGCTGGAATGGGTCCCCTTTTTCATCCTCAAACTGCATTTGGAAGATACCCTCTTCCAATAACTTCCATTTGAAGTCAATGGAGTCTTCGCCGCTGTTCGCCGTCGGAGGAGAAGCTGAAGATGGCTTTTTATCGGTAGCGTGTTTTAATTTCTTTTGTTCTGAACTTTTGAAACCAATTTTGGATCATGTTTCGTTGATGTATTTGGAAGAGATTTGATTCTTGTTGCTGGTTGTTGGTGGTATCTGGGTTTCCGTTAAGGGATAACTTGATGGATCGAAATGTTACCTCTCTTTTAGTTCAAAATTGAAATTATTTGCTAAAAGAAAAGCTCTGTTTCTCTCTCTTCTACATTTCCCTTTGATTTTTGGAAGCTGAAGCTACTTGGGATTCAGGATAGAACCTCATCTAAATGAAATATGTTAGCAAAAAAAAAAAAAAAAAAAAAAGAAGCCCATCTCTCTTTATCTCTCCCCCCTTTTCCTCTGATTTTTGAATGCTACAGTAATTTGGGAATTTGAAAGAACCATATGAAAATGAAAGTTATTTGCAAAGGGAAAAGAAGCCCCCTTCTCTCTCTCTCTCTTCTTTTCCTCTGATTTTTGGATGCTGCAGCTACTTGGGAAGAATCTTATCAAAATGAAGGTAATTTGTAAAGGAAAAGAAGGCTCTCTCTCCCACTTCGCTCTGATATTTGGATGATGCAGCTACTTGAGAGGAGTTGTATCAAAGTGAAAGTTTCAAAAGAGAAAAGAAACCTCTCTCTCTTTCTCTCTCCTGGAGTTTTCCTTGGTTATGGTGGCACTGAGTTACTTTGAACTGTATTAGTCGGTCCTAATCCTAAAAGGTCGATCCCATTTACTTCTTGCAAAAAAAAAAAAAAATGCAGGAACCTGAAGATCGAATATGCTGAATCCAAGCCACTCATTTCTATCGTTTTGGAACTTGTATCCTCATTTGCTTGCTAATCGTAATAGGAAAATCAAGATCCTTAGGTTTTTTTTTGTCAGACTCCAAACTAATTTTGATTTCATGTGAAGGAAAAATGGCTACTCGAACCAATTTATACAAATTTTGGATATCATTTGTTTAGGCCATTTACAAATCGCCATAGAATAGAGATCTTGATGCATTTTAGTGCACCTATTGGAGATGTCTAATATTTTTGTTGTGAATGTGTATACTGCATCTGCTTGTCATATTGATTGACCCAGTCAATCCTTTCTGGCAGAATATGAATGACGATACCGATGATATGTATGATGATTTGTTCAAGAAATATGGGAATGTGGTATTCAAGAGCAATGATCGAAAGCTTCCGAGTGCAGAAGTCGATGATGATGCGGAAAGCCTTTCATGTAAGCTTCTCTTGTCATTAGCAGGAACAAGAAACAGACATCAGTTTGCTGTGGATTAATGTGCTGTGTTCATGTTGCGTTCTCTTCATCCATGAGTATAATTGATAATCTTAGCTAATTTGTCTTAACTTGATATGGTTTTCTGTTATGTAATTGTGAGGAAGTCTTATTAATGAAACACCAAGCTTTCATTGAGAAAAAAAATGAAAGAATACAAGGGCATACAAAAAGAGGGGCCCACAAAAAAGGGAGACACCTACAAGAAAGGTCTTTAATCAAGCAAAATAAGATCATAAAATCTAATAAGGGACCAAACATCAAACGGCGAGTGCTCCAACCCTCGAAAAATTCTATTATTTCTCTCCCCCCAGACCCCCCACAAGATTGTGCACACCCCAGCTTGCCACAAAAACTTTCCTTTCTTGCGAAAAGGAGAGTGGAGAATAAACTCCTCAAGCGTCTCTCTACAATCCCTCCACAGGGAGACCAAACTCCGTAAAGAAATAATTCCAAATATCAAAAGCCACGTTGCAACTCCAGAGAGTATGGTCGAGATCCTCCGCAACCCTCCTACAAAGGATGCAACACCAAGGCTCAACCAAGGTTCGCATCCTCCTCGAAACCCTGTCCTAGGTGTTAACTCTTTCATGAAGAACCTGCCAAGCAAAAGATTTAACTTTCTTTGGAATTTTCACCTTTCACAACAAGGCAAAGACATCTTCTCGCGTAGAGGAGGGAGAAGGATTAACCAAGGAAAGAAAAAAGGACCTACACGAAAATCCCAAGGACTAGGATGAGACAAGATATCAGCCACAAGGATAAATGATAAAAGCGGTAAAAACAAAACAAAGAGGTCTATCCCCCAATCACCTATCTTCCTAGAAAAAAGTAGCACTCCCATCCCCACGAAACAATGAATGAGGCAAGAAAAGAAGGGGAGTCCCTCAACGATACCTTTCCAAGGATTTCTAGAAGTGCCTCTACCTTCACACGAAGTCCACTCAAATGGAGACGACCCATACTTGCTCACAATGACCTTATGCCAGAGAGTGGATGACTCACTGTGAAAATGCCACAGTTATTTCGCCAGAAGGCCTTGTTGCGAGCTCTCAAATTTCCGATCCCTAGAAATGGGAAGTAGGATGCAAAGAGTTATTTCCTTAGCATTGCCAGAGTTTTCCCCCCTCTCATTTGATGCGGAATGGTTACATACAAATTACATGTCCATCCAAAATCAAGTGTAGGTCATTGATTCCACCCGAACGGTCCTTTCAATTGAAAAAGAGAGAGAATTCATATTCATCCTGAAGGGATTGAATAAGCCTTTGTAAAAAGGTTACATCCCATTATCTCAAGTTTTTAATAAGTAGAAAGAAAAAAAGCTAGCCATTAGATGGAACCAATAATCATCACATTTCTTTGAATCTGACTTATAAGGTCAATATCATTTATATAGAACTAAATCCACAAGCTCCTACACATGGATGAATGATTAGTACATAATACACACATACCATGCGCGTGTATTTTATGAATTCAAAGCTTCAGGTACATGGAACGGTTGGTCAACTAATAATTCAATGCTTATCTCCGCAGTTGCTGTATCAATGGCAAAAGTTGCTAGTGATGTAAAGGCTGCAGATATCCGTGTTCTGTTTGTGAAACCTCTAGTTTATTGGACCAGTTTTTTCATCATTGCAACGGCGTTTTCTCGTCCTCAGATTGATGCTATAGGGTACTGCTACTTTTTTGGTTTATGTTCTGTTACTGCCTGCAATAAGGAAAATTGGACTCTACATATGAAGGTATTGCTTAAACTCACAGTTCAATTGTATTTTGCAATGCAGATCCCGAATAAGAGACCTCGCTGAGAAGAAGTATGGAAGAATTCCTTCCGGTGACGTGAAGCCTAATTCGTGGACTTTATTGGATTTTGGTATGTACTATTTGCATTTCAATTTGTTTATCTAAGATAGGATACAAGTGTTTCTTTAAAGAAGATGGAAGCACAAGAGACTGGGACAGGAACCCTAACCAATCAGAAAGAAGCTACATTTGCTAAACTAATAGCTTTACTAAAACATGTTGTCTACCTCTTTCTCTCTCTCTGAATGAAAATCAAACTTTCATTGAGACAGTGAGAAAATACAAATAAGCTATACAAAAAAGAAAGAAGCCCACAAAACGATCCTGTACAGAGAAAACAGAGTGATCAGAGAAATTATATATATAAAAAAGTTCCTGTTGATGGGAATATTAGACAAAAGGATAGTTACAAAAGTCCTTATAAACTGACTACCCACAGAGAGAGGTATATTCTCAATTGTAAAGACTAAAACTTCAAAATTTAATCTTGTTGTCTATTAGAAGCTGCAGTCTTTAGTGTTTAAGGACTTGAGATGTTTGGAGAGATCCTTCTAGGTATTGGGTTCAAGCTCTTTGGTGGATGTTTCTCGAAGCGGGTTTTGGGGTGAGCAAAGCTTTCCTGAGGTTTAGTAGTAGGGGTGGATCATGAACACAATGCAAGTAGCGAGGCCATTCGATATCCCATTTATATAAAAAGGAAAATCTATTGTCATAGATGTGCATAGCGAAGATCTGTGGTGCATTATATGCTATACCCAAATGTGATTTTCCATCCATCTGATTCTTCGTCTACCACATAGTGGAGGGATGACTTCTAGACTTTTATTATTATTATTTTTCTATTTGAGTTCAACGACTAAGATAGAGATTCAAACTTCGGACCTTTTGGTCGAAGATTCAGTGCCTTAACTAGTTAAACTATGCTTTATAAACCACTTTGTAGCTATAGGATCATTTGTAGTCTGCTTTATATTGGTGTTGGTAAGCTATTTTTCGAATCATGTGGTAGACAAATTCAAATTCATTAGATCAAATCAAGTAGGCCACTTCAAAACAAAAAACTTGGATTTAACTACTCTCTTAGAGATGGAAATCTAAATTTCAACTCTCTATTAGATTACATGGGTTTCATCTCAAAACCAATTGACAATAAAAGGAGTAACCCATATATCTTATAAGTGGTGAGGCTCTCCACCTTTCCAATGTGGGATCCTCAACACTCTCCTACCTCGTTTTGGAATTCAAGTAAATATTAGAGTCCAAAATGCACATTGACCGATCTTTGATACCAACGAACCCATATATCTTATAAGTTGTGAGGCTCTCCACCTTTCCAATGTGAGATCCTCAACACTCTCCTACCTCGTTTTAGAATTCAAGTAAAATATTAGAGTCCAAAATGCACATTGACCGATCTTTGATACCAACGAACTCAGAAAGCAAATTGCCCTGTTGTTTTTCGTTCTCAGGAGATGTGATTATCCATATTTTTCTACCCCAGCAGAGGGCATTCTACAACTTGGAAGAGTTCTATGGCAATGCAACTCCCGTGGAGCTACCGTTCGAAAACCAACGGCCATTTTGAAGTGAAAAACCGCTTCCGATTGATTCCCGAGCAACTGATGCTGAATGAGATGCAGTTTGTGGCAGCTGGTGAGGCCAGATTGCTTCTGTTTGTTGTGTCCTCTCATCAAAACAGCTACCATGTGAAGTGTTGCAGAAACAGCTGCAAGAATTGGGAGTTCCAACTTCTGACTGCTTGAGGTTGAAGACAGAATCACTTGGCAGATGGTGGTGTTATGAGAGCCCTATCCCAAAGTTTCTCCTGTCCCCCAACTCTCTCTCTTTTCTCTCTCTCATGAATGACTGGTCTGATGTGAGTGAGATAGTTTCCAAGTAAAAATTTAGTTAAAATTTTATGAATCAAGCTGGTTAGAAGAGTGCATTAAGATTTCATTTACTAAATGGGGAAGTTTGTGGGAGAACTGAAATGAAATTGGTTTGATCAAGTATTGAATTTGAACCTTTTGTATAATGAGGATTAGAGAATTTCCATAAACACTGGTTAAGTTGAAGAAATCTGTAGTTAAAACTCAGAAAGAAATTTGAAATAAGTAAAACAGAGGCGTATTTGGATTTTAACTTCCTAAGTGATTTGGGAGGCCAAATGCTCTAAAATGGTTAAAAAT

mRNA sequence

CTTCTTGGTTTACAAATATCTTCTCTCACGGTGTACCATTTTTCCTTTCTGCACGAAAGAAGCCAGCATGGCGTTATCCACTATCTTATCTCTACACGGCGCCGGCGAGCTCCGGCAACTGGGTTGTGATTATTTCAGAGTTTCTAAAAAACCCAGAAAGCAATTTTGGTGCTCATGCTGGAATGGGTCCCCTTTTTCATCCTCAAACTGCATTTGGAAGATACCCTCTTCCAATAACTTCCATTTGAAGTCAATGGAGTCTTCGCCGCTGTTCGCCGTCGGAGGAGAAGCTGAAGATGGCTTTTTATCGAATATGAATGACGATACCGATGATATGTATGATGATTTGTTCAAGAAATATGGGAATGTGGTATTCAAGAGCAATGATCGAAAGCTTCCGAGTGCAGAAGTCGATGATGATGCGGAAAGCCTTTCATTTGCTGTATCAATGGCAAAAGTTGCTAGTGATGTAAAGGCTGCAGATATCCGTGTTCTGTTTGTGAAACCTCTAGTTTATTGGACCAGTTTTTTCATCATTGCAACGGCGTTTTCTCGTCCTCAGATTGATGCTATAGGATCCCGAATAAGAGACCTCGCTGAGAAGAAGTATGGAAGAATTCCTTCCGGTGACGTGAAGCCTAATTCGTGGACTTTATTGGATTTTGGAGATGTGATTATCCATATTTTTCTACCCCAGCAGAGGGCATTCTACAACTTGGAAGAGTTCTATGGCAATGCAACTCCCGTGGAGCTACCGTTCGAAAACCAACGGCCATTTTGAAGTGAAAAACCGCTTCCGATTGATTCCCGAGCAACTGATGCTGAATGAGATGCAGTTTGTGGCAGCTGGTGAGGCCAGATTGCTTCTGTTTGTTGTGTCCTCTCATCAAAACAGCTACCATGTGAAGTGTTGCAGAAACAGCTGCAAGAATTGGGAGTTCCAACTTCTGACTGCTTGAGGTTGAAGACAGAATCACTTGGCAGATGGTGGTGTTATGAGAGCCCTATCCCAAAGTTTCTCCTGTCCCCCAACTCTCTCTCTTTTCTCTCTCTCATGAATGACTGGTCTGATGTGAGTGAGATAGTTTCCAAGTAAAAATTTAGTTAAAATTTTATGAATCAAGCTGGTTAGAAGAGTGCATTAAGATTTCATTTACTAAATGGGGAAGTTTGTGGGAGAACTGAAATGAAATTGGTTTGATCAAGTATTGAATTTGAACCTTTTGTATAATGAGGATTAGAGAATTTCCATAAACACTGGTTAAGTTGAAGAAATCTGTAGTTAAAACTCAGAAAGAAATTTGAAATAAGTAAAACAGAGGCGTATTTGGATTTTAACTTCCTAAGTGATTTGGGAGGCCAAATGCTCTAAAATGGTTAAAAAT

Coding sequence (CDS)

ATGGCGTTATCCACTATCTTATCTCTACACGGCGCCGGCGAGCTCCGGCAACTGGGTTGTGATTATTTCAGAGTTTCTAAAAAACCCAGAAAGCAATTTTGGTGCTCATGCTGGAATGGGTCCCCTTTTTCATCCTCAAACTGCATTTGGAAGATACCCTCTTCCAATAACTTCCATTTGAAGTCAATGGAGTCTTCGCCGCTGTTCGCCGTCGGAGGAGAAGCTGAAGATGGCTTTTTATCGAATATGAATGACGATACCGATGATATGTATGATGATTTGTTCAAGAAATATGGGAATGTGGTATTCAAGAGCAATGATCGAAAGCTTCCGAGTGCAGAAGTCGATGATGATGCGGAAAGCCTTTCATTTGCTGTATCAATGGCAAAAGTTGCTAGTGATGTAAAGGCTGCAGATATCCGTGTTCTGTTTGTGAAACCTCTAGTTTATTGGACCAGTTTTTTCATCATTGCAACGGCGTTTTCTCGTCCTCAGATTGATGCTATAGGATCCCGAATAAGAGACCTCGCTGAGAAGAAGTATGGAAGAATTCCTTCCGGTGACGTGAAGCCTAATTCGTGGACTTTATTGGATTTTGGAGATGTGATTATCCATATTTTTCTACCCCAGCAGAGGGCATTCTACAACTTGGAAGAGTTCTATGGCAATGCAACTCCCGTGGAGCTACCGTTCGAAAACCAACGGCCATTTTGA

Protein sequence

MALSTILSLHGAGELRQLGCDYFRVSKKPRKQFWCSCWNGSPFSSSNCIWKIPSSNNFHLKSMESSPLFAVGGEAEDGFLSNMNDDTDDMYDDLFKKYGNVVFKSNDRKLPSAEVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTSFFIIATAFSRPQIDAIGSRIRDLAEKKYGRIPSGDVKPNSWTLLDFGDVIIHIFLPQQRAFYNLEEFYGNATPVELPFENQRPF

Homology

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BLAST of Tan0001104 vs. ExPASy Swiss-Prot
Match: Q9LDY9 (Protein Iojap, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IJ PE=2 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 3.6e-78
Identity = 157/239 (65.69%), Postives = 184/239 (76.99%), Query Frame = 0


Query: 1   MALSTILSLHG---AGELRQLGCDYFRVSKKPRK-QFWCSCWNGSPFSSS-NCIWKIPSS 60
           MA ST L++ G   AG+ R         S  PRK     SC +    SS  NC W++  S
Sbjct: 1   MASSTGLTVAGALLAGDFRLPAVS----SLIPRKTSSSLSCLSNRDLSSPYNCCWRL--S 60

Query: 61  NNFHLKSMESSPLFAVGGEAEDGFLSNMNDDTDDMYDDLFKKYGNVVFKSNDRKLPSAEV 120
               L S+ +S  FAVG EAEDGFLSN+++DTD+M+DDLF KYG VVF+S D K P+AEV
Sbjct: 61  RGKILTSLSNSRKFAVGKEAEDGFLSNVSEDTDEMFDDLFNKYGKVVFRSTDVKSPTAEV 120

Query: 121 DDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTSFFIIATAFSRPQIDAIGSRIRD 180
           DDDAESL+FAV +AKVASDVKA DI+VLFVKPLVYWT FFIIATAFSRPQIDAIGSR+RD
Sbjct: 121 DDDAESLAFAVELAKVASDVKAGDIKVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRMRD 180

Query: 181 LAEKKYGRIPSGDVKPNSWTLLDFGDVIIHIFLPQQRAFYNLEEFYGNATPVELPFENQ 235
           LAEKKYG++ +GDVKPNSWTLLDFGDV+IH+FLP QR FYNLE+FYGNA  +ELPFE+Q
Sbjct: 181 LAEKKYGKVANGDVKPNSWTLLDFGDVVIHLFLPPQRTFYNLEDFYGNAMQIELPFEDQ 233

[Close]

BLAST of Tan0001104 vs. ExPASy Swiss-Prot
Match: Q41822 (Protein Iojap, chloroplastic OS=Zea mays OX=4577 GN=Ij PE=1 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 3.0e-56
Identity = 105/159 (66.04%), Postives = 127/159 (79.87%), Query Frame = 0


Query: 81  SNMN----DDTDDMYDDLFKKYGNVVFKSNDRKLPSAEVDDDAESLSFAVSMAKVASDVK 140
           SN+N    DD D + +DL K++G VV+ S     P+ E DDDAE LSFAVS+AK AS++K
Sbjct: 69  SNVNFGRGDDADKLLEDLLKQHGEVVYSSGGPPDPTVEADDDAECLSFAVSLAKAASEIK 128

Query: 141 AADIRVLFVKPLVYWTSFFIIATAFSRPQIDAIGSRIRDLAEKKYGRIPSGDVKPNSWTL 200
           A DIRVL V+ LVYWT FFII TAFS  QIDAI S++RD+ EK++ ++ SGD KPNSWTL
Sbjct: 129 ATDIRVLCVRRLVYWTRFFIILTAFSNAQIDAISSKMRDIGEKQFSKVASGDTKPNSWTL 188

Query: 201 LDFGDVIIHIFLPQQRAFYNLEEFYGNATPVELPFENQR 236
           LDFGDV++HIFLPQQRAFYNLEEFYGNATP+ELPF+ QR
Sbjct: 189 LDFGDVVVHIFLPQQRAFYNLEEFYGNATPIELPFDTQR 227

[Close]

BLAST of Tan0001104 vs. ExPASy Swiss-Prot
Match: P73658 (Ribosomal silencing factor RsfS OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rsfS PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.6e-15
Identity = 41/101 (40.59%), Postives = 63/101 (62.38%), Query Frame = 0


Query: 127 SMAKVASDVKAADIRVLFVKPLVYWTSFFIIATAFSRPQIDAIGSRIRDLAEKKYGRIPS 186
           ++A+ A + KA D+ +L V  + Y   +F+I T FSR Q+ AI   I    E  +G++P+
Sbjct: 33  TIAQAAEERKAGDLVILKVTDVSYLADYFVICTGFSRTQVRAIADNIEKQVELVHGQLPT 92

Query: 187 GDVKPNS---WTLLDFGDVIIHIFLPQQRAFYNLEEFYGNA 225
              + NS   W L DFGDV++H F+P++R FY LE F+G+A
Sbjct: 93  -HTEGNSESIWVLQDFGDVLVHTFMPEEREFYKLEAFWGHA 132

[Close]

BLAST of Tan0001104 vs. ExPASy Swiss-Prot
Match: Q97P97 (Ribosomal silencing factor RsfS OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=rsfS PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.5e-10
Identity = 37/104 (35.58%), Postives = 59/104 (56.73%), Query Frame = 0


Query: 128 MAKVASDVKAADIRVLFVKPLVYWTSFFIIATAFSRPQIDAIGSRIRD-LAEKKY-GRIP 187
           + K A + +A DI  L V+ L   T + +I ++ +  Q+DAI + IR+ +A+  + G   
Sbjct: 10  VVKAADEKRAEDILALDVQDLTSVTDYLVITSSMNSRQLDAIAANIREKVAQAGFKGSHV 69

Query: 188 SGDVKPNSWTLLDFGDVIIHIFLPQQRAFYNLEEFYGNATPVEL 230
            GD     W LLD G V++HIF  + RA YNLE+ +  A  V++
Sbjct: 70  EGDA-AGGWVLLDLGAVVVHIFSEEMRAHYNLEKLWHEANSVDI 112

[Close]

BLAST of Tan0001104 vs. ExPASy Swiss-Prot
Match: Q9KD89 (Ribosomal silencing factor RsfS OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=rsfS PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 9.5e-10
Identity = 37/111 (33.33%), Postives = 60/111 (54.05%), Query Frame = 0


Query: 120 ESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTSFFIIATAFSRPQIDAIGSRIRDLAEK 179
           E L  AV+      D KA  +  L +K +     FF+I    S  Q+ AI   ++ +A++
Sbjct: 5   ELLQLAVN---AVDDKKAEQVVALNMKGISLIADFFLICHGNSEKQVQAIAHELKKVAQE 64

Query: 180 KYGRIPSGD-VKPNSWTLLDFGDVIIHIFLPQQRAFYNLEEFYGNATPVEL 230
           +   I   +  +   W L+D GDV++H+F   +RA+YNLE+ +G+A  VEL
Sbjct: 65  QGIEIKRLEGYEQARWVLIDLGDVVVHVFHKDERAYYNLEKLWGDAPTVEL 112

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BLAST of Tan0001104 vs. NCBI nr
Match: XP_004147757.1 (protein Iojap, chloroplastic [Cucumis sativus] >KGN53523.1 hypothetical protein Csa_014809 [Cucumis sativus])

HSP 1 Score: 437.6 bits (1124), Expect = 7.0e-119
Identity = 214/244 (87.70%), Postives = 225/244 (92.21%), Query Frame = 0


Query: 1   MALSTILSLHGAG-------ELRQLGCDYFRVSKKPRKQFWCSCWNGSPFSSSNCIWKIP 60
           MALST LSLHGAG       ELRQLG DYF V K+PRKQ +CSCWNGSPF   NC+W++P
Sbjct: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60

Query: 61  SSNNFHLKSMESSPLFAVGGEAEDGFLSNMNDDTDDMYDDLFKKYGNVVFKSNDRKLPSA 120
           S NNFHLKSMESSPLFAVGGEAEDGFLSNMND+TDDMYD+LFKKYGNVVFKSND+K PSA
Sbjct: 61  SVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQKPPSA 120

Query: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTSFFIIATAFSRPQIDAIGSRI 180
           E+DDD+ESLSFAVSMAKVASDVKAADIRVLFVKPLVYWT FFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRIPSGDVKPNSWTLLDFGDVIIHIFLPQQRAFYNLEEFYGNATPVELPFEN 238
           RDLAEKKYGR PSGDVKPNSWTLLDFGDV+IHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

[Close]

BLAST of Tan0001104 vs. NCBI nr
Match: XP_022982446.1 (protein Iojap, chloroplastic [Cucurbita maxima])

HSP 1 Score: 437.6 bits (1124), Expect = 7.0e-119
Identity = 215/244 (88.11%), Postives = 225/244 (92.21%), Query Frame = 0


Query: 1   MALSTILSLHGA-------GELRQLGCDYFRVSKKPRKQFWCSCWNGSPFSSSNCIWKIP 60
           MALS +LSLHGA       GE RQLG DYFRVS +PRKQFWCSCWNGS FSS NCIWKIP
Sbjct: 1   MALSIVLSLHGAGAVTSFGGEFRQLGHDYFRVSGRPRKQFWCSCWNGSSFSSRNCIWKIP 60

Query: 61  SSNNFHLKSMESSPLFAVGGEAEDGFLSNMNDDTDDMYDDLFKKYGNVVFKSNDRKLPSA 120
           SS+NFHLKSMESSPLF+VG EAED FLSNMN+DTDDMYDDLFKK+GNVVFK ND+K P+A
Sbjct: 61  SSHNFHLKSMESSPLFSVGKEAEDSFLSNMNEDTDDMYDDLFKKHGNVVFKRNDQKPPTA 120

Query: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTSFFIIATAFSRPQIDAIGSRI 180
           EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWT FFIIATAFSRPQIDAIGSRI
Sbjct: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRIPSGDVKPNSWTLLDFGDVIIHIFLPQQRAFYNLEEFYGNATPVELPFEN 238
           RDLAEKKYGR PSGDVKPNSWTLLDFGDV+IHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

[Close]

BLAST of Tan0001104 vs. NCBI nr
Match: XP_038876545.1 (protein Iojap, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 436.8 bits (1122), Expect = 1.2e-118
Identity = 216/244 (88.52%), Postives = 225/244 (92.21%), Query Frame = 0


Query: 1   MALSTILSLHGA-------GELRQLGCDYFRVSKKPRKQFWCSCWNGSPFSSSNCIWKIP 60
           MALST LSLHGA       GELRQLG D FRVSK+PRKQ +CSCWNGSPF + NCIW +P
Sbjct: 1   MALSTTLSLHGAGAGTLFGGELRQLGHDNFRVSKRPRKQNFCSCWNGSPFPNQNCIWGMP 60

Query: 61  SSNNFHLKSMESSPLFAVGGEAEDGFLSNMNDDTDDMYDDLFKKYGNVVFKSNDRKLPSA 120
           S+NNFHLKSME SPLFAV GEAEDGFLSNMNDDTDDMYDDLFKK+GNVVFKSND+K PSA
Sbjct: 61  SANNFHLKSMECSPLFAVEGEAEDGFLSNMNDDTDDMYDDLFKKFGNVVFKSNDQKPPSA 120

Query: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTSFFIIATAFSRPQIDAIGSRI 180
           E+DDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWT FFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRIPSGDVKPNSWTLLDFGDVIIHIFLPQQRAFYNLEEFYGNATPVELPFEN 238
           RDLAEKKYGR PSGDVKPNSWTLLDFGDV+IHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

[Close]

BLAST of Tan0001104 vs. NCBI nr
Match: KAG7031113.1 (Protein Iojap, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 436.4 bits (1121), Expect = 1.6e-118
Identity = 215/244 (88.11%), Postives = 225/244 (92.21%), Query Frame = 0


Query: 1   MALSTILSLHGA-------GELRQLGCDYFRVSKKPRKQFWCSCWNGSPFSSSNCIWKIP 60
           MALS +LSLHGA       GE RQLG DYFRVS +PRKQFWCSCWNGS FSS NCIWKIP
Sbjct: 519 MALSIVLSLHGAGAGTSFGGEFRQLGHDYFRVSGRPRKQFWCSCWNGSSFSSLNCIWKIP 578

Query: 61  SSNNFHLKSMESSPLFAVGGEAEDGFLSNMNDDTDDMYDDLFKKYGNVVFKSNDRKLPSA 120
           SSNNFHLKSMESSPLFAVG EAED FLSNMN+DTDDMYDDLFKK+G+VVFK +D+K P+A
Sbjct: 579 SSNNFHLKSMESSPLFAVGKEAEDSFLSNMNEDTDDMYDDLFKKHGSVVFKRDDQKPPTA 638

Query: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTSFFIIATAFSRPQIDAIGSRI 180
           EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWT FFIIATAFSRPQIDAIGSRI
Sbjct: 639 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 698

Query: 181 RDLAEKKYGRIPSGDVKPNSWTLLDFGDVIIHIFLPQQRAFYNLEEFYGNATPVELPFEN 238
           RDLAEKKYGR PSGDVKPNSWTLLDFGDV+IHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 699 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 758

[Close]

BLAST of Tan0001104 vs. NCBI nr
Match: KAG6600465.1 (Protein Iojap, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 436.4 bits (1121), Expect = 1.6e-118
Identity = 215/244 (88.11%), Postives = 225/244 (92.21%), Query Frame = 0


Query: 1   MALSTILSLHGA-------GELRQLGCDYFRVSKKPRKQFWCSCWNGSPFSSSNCIWKIP 60
           MALS +LSLHGA       GE RQLG DYFRVS +PRKQFWCSCWNGS FSS NCIWKIP
Sbjct: 592 MALSIVLSLHGAGAGTSFGGEFRQLGHDYFRVSGRPRKQFWCSCWNGSSFSSLNCIWKIP 651

Query: 61  SSNNFHLKSMESSPLFAVGGEAEDGFLSNMNDDTDDMYDDLFKKYGNVVFKSNDRKLPSA 120
           SSNNFHLKSMESSPLFAVG EAED FLSNMN+DTDDMYDDLFKK+G+VVFK +D+K P+A
Sbjct: 652 SSNNFHLKSMESSPLFAVGKEAEDSFLSNMNEDTDDMYDDLFKKHGSVVFKRDDQKPPTA 711

Query: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTSFFIIATAFSRPQIDAIGSRI 180
           EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWT FFIIATAFSRPQIDAIGSRI
Sbjct: 712 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 771

Query: 181 RDLAEKKYGRIPSGDVKPNSWTLLDFGDVIIHIFLPQQRAFYNLEEFYGNATPVELPFEN 238
           RDLAEKKYGR PSGDVKPNSWTLLDFGDV+IHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 772 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 831

[Close]

BLAST of Tan0001104 vs. ExPASy TrEMBL
Match: A0A6J1IZC7 (protein Iojap, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481267 PE=3 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 3.4e-119
Identity = 215/244 (88.11%), Postives = 225/244 (92.21%), Query Frame = 0


Query: 1   MALSTILSLHGA-------GELRQLGCDYFRVSKKPRKQFWCSCWNGSPFSSSNCIWKIP 60
           MALS +LSLHGA       GE RQLG DYFRVS +PRKQFWCSCWNGS FSS NCIWKIP
Sbjct: 1   MALSIVLSLHGAGAVTSFGGEFRQLGHDYFRVSGRPRKQFWCSCWNGSSFSSRNCIWKIP 60

Query: 61  SSNNFHLKSMESSPLFAVGGEAEDGFLSNMNDDTDDMYDDLFKKYGNVVFKSNDRKLPSA 120
           SS+NFHLKSMESSPLF+VG EAED FLSNMN+DTDDMYDDLFKK+GNVVFK ND+K P+A
Sbjct: 61  SSHNFHLKSMESSPLFSVGKEAEDSFLSNMNEDTDDMYDDLFKKHGNVVFKRNDQKPPTA 120

Query: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTSFFIIATAFSRPQIDAIGSRI 180
           EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWT FFIIATAFSRPQIDAIGSRI
Sbjct: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRIPSGDVKPNSWTLLDFGDVIIHIFLPQQRAFYNLEEFYGNATPVELPFEN 238
           RDLAEKKYGR PSGDVKPNSWTLLDFGDV+IHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

[Close]

BLAST of Tan0001104 vs. ExPASy TrEMBL
Match: A0A0A0KVG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G064060 PE=3 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 3.4e-119
Identity = 214/244 (87.70%), Postives = 225/244 (92.21%), Query Frame = 0


Query: 1   MALSTILSLHGAG-------ELRQLGCDYFRVSKKPRKQFWCSCWNGSPFSSSNCIWKIP 60
           MALST LSLHGAG       ELRQLG DYF V K+PRKQ +CSCWNGSPF   NC+W++P
Sbjct: 1   MALSTTLSLHGAGAGTLFGAELRQLGHDYFGVFKRPRKQIFCSCWNGSPFPYRNCLWRVP 60

Query: 61  SSNNFHLKSMESSPLFAVGGEAEDGFLSNMNDDTDDMYDDLFKKYGNVVFKSNDRKLPSA 120
           S NNFHLKSMESSPLFAVGGEAEDGFLSNMND+TDDMYD+LFKKYGNVVFKSND+K PSA
Sbjct: 61  SVNNFHLKSMESSPLFAVGGEAEDGFLSNMNDETDDMYDELFKKYGNVVFKSNDQKPPSA 120

Query: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTSFFIIATAFSRPQIDAIGSRI 180
           E+DDD+ESLSFAVSMAKVASDVKAADIRVLFVKPLVYWT FFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDSESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRIPSGDVKPNSWTLLDFGDVIIHIFLPQQRAFYNLEEFYGNATPVELPFEN 238
           RDLAEKKYGR PSGDVKPNSWTLLDFGDV+IHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

[Close]

BLAST of Tan0001104 vs. ExPASy TrEMBL
Match: A0A6J1FNP0 (protein Iojap, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447435 PE=3 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 6.4e-118
Identity = 213/244 (87.30%), Postives = 224/244 (91.80%), Query Frame = 0


Query: 1   MALSTILSLHGA-------GELRQLGCDYFRVSKKPRKQFWCSCWNGSPFSSSNCIWKIP 60
           MALS +LSLHGA       G+ RQLG DYF VS +PRKQFWCSCWNGS FSS NCIWKIP
Sbjct: 1   MALSIVLSLHGAGAGTSFGGQFRQLGHDYFGVSGRPRKQFWCSCWNGSSFSSQNCIWKIP 60

Query: 61  SSNNFHLKSMESSPLFAVGGEAEDGFLSNMNDDTDDMYDDLFKKYGNVVFKSNDRKLPSA 120
           SSNNFHLKSMESSPLFAVG EAED FLSNMN+DTDDMYDDLFKK+G+VVFK +D+K P+A
Sbjct: 61  SSNNFHLKSMESSPLFAVGKEAEDSFLSNMNEDTDDMYDDLFKKHGSVVFKRDDQKPPTA 120

Query: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTSFFIIATAFSRPQIDAIGSRI 180
           EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWT FFIIATAFSRPQIDAIGSRI
Sbjct: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRIPSGDVKPNSWTLLDFGDVIIHIFLPQQRAFYNLEEFYGNATPVELPFEN 238
           RDLAEKKYGR PSGDVKPNSWTLLDFGDV+IHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

[Close]

BLAST of Tan0001104 vs. ExPASy TrEMBL
Match: A0A5D3CY15 (Oligomerization domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G001790 PE=3 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 3.9e-115
Identity = 209/244 (85.66%), Postives = 223/244 (91.39%), Query Frame = 0


Query: 1   MALSTILSLHGA-------GELRQLGCDYFRVSKKPRKQFWCSCWNGSPFSSSNCIWKIP 60
           MALST LSLHGA       GEL QLG +YF V ++PRKQ +CSCWNGSPF   NCIW++P
Sbjct: 1   MALSTTLSLHGAGAGTLFGGELWQLGHNYFGVFRRPRKQIFCSCWNGSPFPYRNCIWRVP 60

Query: 61  SSNNFHLKSMESSPLFAVGGEAEDGFLSNMNDDTDDMYDDLFKKYGNVVFKSNDRKLPSA 120
           S+NNF+LKS+ESSPLFAV GEAEDGFLSNMNDDT+DMYD+LFKKYGNVVFKSND+K PSA
Sbjct: 61  SANNFYLKSVESSPLFAVRGEAEDGFLSNMNDDTNDMYDELFKKYGNVVFKSNDQKPPSA 120

Query: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTSFFIIATAFSRPQIDAIGSRI 180
           E+DDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWT FFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRIPSGDVKPNSWTLLDFGDVIIHIFLPQQRAFYNLEEFYGNATPVELPFEN 238
           RDLAEKKYGR  SGDVKPNSWTLLDFGDV+IHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSSSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

[Close]

BLAST of Tan0001104 vs. ExPASy TrEMBL
Match: A0A5A7V7J6 (Oligomerization domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold468G00520 PE=3 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.1e-114
Identity = 209/244 (85.66%), Postives = 223/244 (91.39%), Query Frame = 0


Query: 1   MALSTILSLHGA-------GELRQLGCDYFRVSKKPRKQFWCSCWNGSPFSSSNCIWKIP 60
           MALST LSLHGA       GEL QLG +YF V ++PRKQ + SCWNGSPF   NCIW++P
Sbjct: 1   MALSTTLSLHGAGAGTLFGGELWQLGHNYFGVFRRPRKQIFGSCWNGSPFPYRNCIWRVP 60

Query: 61  SSNNFHLKSMESSPLFAVGGEAEDGFLSNMNDDTDDMYDDLFKKYGNVVFKSNDRKLPSA 120
           S+NNF+LKS+ESSPLFAV GEAEDGFLSNMNDDT+DMYD+LFKKYGNVVFKSND+K PSA
Sbjct: 61  SANNFYLKSVESSPLFAVRGEAEDGFLSNMNDDTNDMYDELFKKYGNVVFKSNDQKPPSA 120

Query: 121 EVDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTSFFIIATAFSRPQIDAIGSRI 180
           E+DDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWT FFIIATAFSRPQIDAIGSRI
Sbjct: 121 EIDDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRI 180

Query: 181 RDLAEKKYGRIPSGDVKPNSWTLLDFGDVIIHIFLPQQRAFYNLEEFYGNATPVELPFEN 238
           RDLAEKKYGR PSGDVKPNSWTLLDFGDV+IHIFLPQQRAFYNLEEFYGNATPVELPFEN
Sbjct: 181 RDLAEKKYGRSPSGDVKPNSWTLLDFGDVVIHIFLPQQRAFYNLEEFYGNATPVELPFEN 240

[Close]

BLAST of Tan0001104 vs. TAIR 10
Match: AT3G12930.1 (Lojap-related protein )

HSP 1 Score: 292.7 bits (748), Expect = 2.6e-79
Identity = 157/239 (65.69%), Postives = 184/239 (76.99%), Query Frame = 0


Query: 1   MALSTILSLHG---AGELRQLGCDYFRVSKKPRK-QFWCSCWNGSPFSSS-NCIWKIPSS 60
           MA ST L++ G   AG+ R         S  PRK     SC +    SS  NC W++  S
Sbjct: 1   MASSTGLTVAGALLAGDFRLPAVS----SLIPRKTSSSLSCLSNRDLSSPYNCCWRL--S 60

Query: 61  NNFHLKSMESSPLFAVGGEAEDGFLSNMNDDTDDMYDDLFKKYGNVVFKSNDRKLPSAEV 120
               L S+ +S  FAVG EAEDGFLSN+++DTD+M+DDLF KYG VVF+S D K P+AEV
Sbjct: 61  RGKILTSLSNSRKFAVGKEAEDGFLSNVSEDTDEMFDDLFNKYGKVVFRSTDVKSPTAEV 120

Query: 121 DDDAESLSFAVSMAKVASDVKAADIRVLFVKPLVYWTSFFIIATAFSRPQIDAIGSRIRD 180
           DDDAESL+FAV +AKVASDVKA DI+VLFVKPLVYWT FFIIATAFSRPQIDAIGSR+RD
Sbjct: 121 DDDAESLAFAVELAKVASDVKAGDIKVLFVKPLVYWTRFFIIATAFSRPQIDAIGSRMRD 180

Query: 181 LAEKKYGRIPSGDVKPNSWTLLDFGDVIIHIFLPQQRAFYNLEEFYGNATPVELPFENQ 235
           LAEKKYG++ +GDVKPNSWTLLDFGDV+IH+FLP QR FYNLE+FYGNA  +ELPFE+Q
Sbjct: 181 LAEKKYGKVANGDVKPNSWTLLDFGDVVIHLFLPPQRTFYNLEDFYGNAMQIELPFEDQ 233

The following BLAST results are available for this feature:

BLAST of Tan0001104 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDY9	3.6e-78	65.69	Protein Iojap, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IJ PE=2 SV=1	[more]
Q41822	3.0e-56	66.04	Protein Iojap, chloroplastic OS=Zea mays OX=4577 GN=Ij PE=1 SV=1	[more]
P73658	2.6e-15	40.59	Ribosomal silencing factor RsfS OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ...	[more]
Q97P97	5.5e-10	35.58	Ribosomal silencing factor RsfS OS=Streptococcus pneumoniae serotype 4 (strain A...	[more]
Q9KD89	9.5e-10	33.33	Ribosomal silencing factor RsfS OS=Bacillus halodurans (strain ATCC BAA-125 / DS...	[more]

BLAST of Tan0001104 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147757.1	7.0e-119	87.70	protein Iojap, chloroplastic [Cucumis sativus] >KGN53523.1 hypothetical protein ...	[more]
XP_022982446.1	7.0e-119	88.11	protein Iojap, chloroplastic [Cucurbita maxima]	[more]
XP_038876545.1	1.2e-118	88.52	protein Iojap, chloroplastic isoform X2 [Benincasa hispida]	[more]
KAG7031113.1	1.6e-118	88.11	Protein Iojap, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6600465.1	1.6e-118	88.11	Protein Iojap, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Tan0001104 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IZC7	3.4e-119	88.11	protein Iojap, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481267 PE=3 SV...	[more]
A0A0A0KVG5	3.4e-119	87.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G064060 PE=3 SV=1	[more]
A0A6J1FNP0	6.4e-118	87.30	protein Iojap, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447435 PE=3 ...	[more]
A0A5D3CY15	3.9e-115	85.66	Oligomerization domain-containing protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A5A7V7J6	1.1e-114	85.66	Oligomerization domain-containing protein OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of Tan0001104 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12930.1	2.6e-79	65.69	Lojap-related protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043519	Nucleotidyltransferase superfamily	GENE3D	3.30.460.10	Beta Polymerase, domain 2	coord: 121..230 e-value: 1.7E-23 score: 84.5
IPR043519	Nucleotidyltransferase superfamily	SUPERFAMILY	81301	Nucleotidyltransferase	coord: 122..231
IPR004394	Protein Iojap/ribosomal silencing factor RsfS	TIGRFAM	TIGR00090	TIGR00090	coord: 128..221 e-value: 7.4E-21 score: 72.2
IPR004394	Protein Iojap/ribosomal silencing factor RsfS	PANTHER	PTHR21043	IOJAP SUPERFAMILY ORTHOLOG	coord: 12..236
IPR004394	Protein Iojap/ribosomal silencing factor RsfS	HAMAP	MF_01477	Iojap_RsfS	coord: 119..222 score: 18.315872
None	No IPR available	PFAM	PF02410	RsfS	coord: 128..221 e-value: 2.6E-19 score: 69.5
None	No IPR available	PANTHER	PTHR21043:SF2	PROTEIN IOJAP, CHLOROPLASTIC	coord: 12..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0001104.1	Tan0001104.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090071	negative regulation of ribosome biogenesis
biological_process	GO:0017148	negative regulation of translation
cellular_component	GO:0042644	chloroplast nucleoid
cellular_component	GO:0000427	plastid-encoded plastid RNA polymerase complex
molecular_function	GO:0043023	ribosomal large subunit binding