
Tan0001099 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGACAATTCTCTTCACTTCACTTCACACATTTCTCCAAATTTTCTCTCTCTAAAGTTCCCTTTCTCTCTCCTCCCAAAAATGGCTTCACAGCCAAGCAAGGCCATTGCCACCATTCTCCTGGCCTTGATCGTCGGCGTCCTCCCGCCGGCGACGAGGTCCGAAGACACCTGTCCGTATCCCTGCTACCCTCCGCCCACCGGCACCGGCACTCCGGCGACTCCGGCCACCCTATCTCCGCCTTCGCAATCAGGCTCCTACTCTCCTCCGGCGTACTACTCTCCGCCGGCTGCATATTACCCATATAACCCGCCGCCGTACGACGGCGACAGCTTCGACGGCGTCACTCCGCCGCCTCCGGACCCGATTCTGCCGTACTTCCCTTACTACTACAAGAAGCCTCCTAACAAACCAGACGACGAATCCGGTGGCGCCGCCGTCGCCGGACGAAAATCGGAGGTCGGGATGATCGCCGGGACTTTTGTATTTATTTCTCTCTCTCTCTCCTTCTTCTTCAGTTTGATGTAATGGAAAAAGCTAGCCTACCTGCTTTTAATTTTAATAAATTAAATTAGATATTTTCATTTATTTATCTTTGTTTTTCCATTTTCTCTCTTAATTTTAGGAAGCTCTAGATAAATATTATTTCTGAGAGGATAATTACGAATTATGTAGTCTTCGAATTATGTATACCAATTATATTTAAAAAAATATTTAAAGTTATTGTAAATATGTGTAATGTAAATGTCTATTTCATA TGACAATTCTCTTCACTTCACTTCACACATTTCTCCAAATTTTCTCTCTCTAAAGTTCCCTTTCTCTCTCCTCCCAAAAATGGCTTCACAGCCAAGCAAGGCCATTGCCACCATTCTCCTGGCCTTGATCGTCGGCGTCCTCCCGCCGGCGACGAGGTCCGAAGACACCTGTCCGTATCCCTGCTACCCTCCGCCCACCGGCACCGGCACTCCGGCGACTCCGGCCACCCTATCTCCGCCTTCGCAATCAGGCTCCTACTCTCCTCCGGCGTACTACTCTCCGCCGGCTGCATATTACCCATATAACCCGCCGCCGTACGACGGCGACAGCTTCGACGGCGTCACTCCGCCGCCTCCGGACCCGATTCTGCCGTACTTCCCTTACTACTACAAGAAGCCTCCTAACAAACCAGACGACGAATCCGGTGGCGCCGCCGTCGCCGGACGAAAATCGGAGGTCGGGATGATCGCCGGGACTTTTGTATTTATTTCTCTCTCTCTCTCCTTCTTCTTCAGTTTGATGTAATGGAAAAAGCTAGCCTACCTGCTTTTAATTTTAATAAATTAAATTAGATATTTTCATTTATTTATCTTTGTTTTTCCATTTTCTCTCTTAATTTTAGGAAGCTCTAGATAAATATTATTTCTGAGAGGATAATTACGAATTATGTAGTCTTCGAATTATGTATACCAATTATATTTAAAAAAATATTTAAAGTTATTGTAAATATGTGTAATGTAAATGTCTATTTCATA ATGGCTTCACAGCCAAGCAAGGCCATTGCCACCATTCTCCTGGCCTTGATCGTCGGCGTCCTCCCGCCGGCGACGAGGTCCGAAGACACCTGTCCGTATCCCTGCTACCCTCCGCCCACCGGCACCGGCACTCCGGCGACTCCGGCCACCCTATCTCCGCCTTCGCAATCAGGCTCCTACTCTCCTCCGGCGTACTACTCTCCGCCGGCTGCATATTACCCATATAACCCGCCGCCGTACGACGGCGACAGCTTCGACGGCGTCACTCCGCCGCCTCCGGACCCGATTCTGCCGTACTTCCCTTACTACTACAAGAAGCCTCCTAACAAACCAGACGACGAATCCGGTGGCGCCGCCGTCGCCGGACGAAAATCGGAGGTCGGGATGATCGCCGGGACTTTTGTATTTATTTCTCTCTCTCTCTCCTTCTTCTTCAGTTTGATGTAA MASQPSKAIATILLALIVGVLPPATRSEDTCPYPCYPPPTGTGTPATPATLSPPSQSGSYSPPAYYSPPAAYYPYNPPPYDGDSFDGVTPPPPDPILPYFPYYYKKPPNKPDDESGGAAVAGRKSEVGMIAGTFVFISLSLSFFFSLM Homology
BLAST of Tan0001099 vs. NCBI nr
Match: XP_011655467.1 (leucine-rich repeat extensin-like protein 5 [Cucumis sativus]) HSP 1 Score: 226.5 bits (576), Expect = 1.5e-55 Identity = 119/150 (79.33%), Postives = 132/150 (88.00%), Query Frame = 0
BLAST of Tan0001099 vs. NCBI nr
Match: XP_038875255.1 (leucine-rich repeat extensin-like protein 1 [Benincasa hispida]) HSP 1 Score: 225.3 bits (573), Expect = 3.4e-55 Identity = 121/150 (80.67%), Postives = 129/150 (86.00%), Query Frame = 0
BLAST of Tan0001099 vs. NCBI nr
Match: XP_008467157.1 (PREDICTED: proline-rich receptor-like protein kinase PERK8 [Cucumis melo] >KAA0046305.1 proline-rich receptor-like protein kinase PERK8 [Cucumis melo var. makuwa] >TYK30470.1 proline-rich receptor-like protein kinase PERK8 [Cucumis melo var. makuwa]) HSP 1 Score: 223.0 bits (567), Expect = 1.7e-54 Identity = 118/142 (83.10%), Postives = 127/142 (89.44%), Query Frame = 0
BLAST of Tan0001099 vs. NCBI nr
Match: XP_023520931.1 (extensin-1-like [Cucurbita pepo subsp. pepo] >XP_023523091.1 extensin-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 213.4 bits (542), Expect = 1.3e-51 Identity = 111/143 (77.62%), Postives = 123/143 (86.01%), Query Frame = 0
BLAST of Tan0001099 vs. NCBI nr
Match: KAG6601836.1 (hypothetical protein SDJN03_07069, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 212.6 bits (540), Expect = 2.3e-51 Identity = 111/143 (77.62%), Postives = 122/143 (85.31%), Query Frame = 0
BLAST of Tan0001099 vs. ExPASy TrEMBL
Match: A0A0A0KUZ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G576580 PE=4 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 7.4e-56 Identity = 119/150 (79.33%), Postives = 132/150 (88.00%), Query Frame = 0
BLAST of Tan0001099 vs. ExPASy TrEMBL
Match: A0A5D3E4I6 (Proline-rich receptor-like protein kinase PERK8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00110 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 8.2e-55 Identity = 118/142 (83.10%), Postives = 127/142 (89.44%), Query Frame = 0
BLAST of Tan0001099 vs. ExPASy TrEMBL
Match: A0A1S3CU56 (proline-rich receptor-like protein kinase PERK8 OS=Cucumis melo OX=3656 GN=LOC103504577 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 8.2e-55 Identity = 118/142 (83.10%), Postives = 127/142 (89.44%), Query Frame = 0
BLAST of Tan0001099 vs. ExPASy TrEMBL
Match: A0A6J1HBK1 (leucine-rich repeat extensin-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111462593 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 4.2e-51 Identity = 110/143 (76.92%), Postives = 121/143 (84.62%), Query Frame = 0
BLAST of Tan0001099 vs. ExPASy TrEMBL
Match: A0A6J1JLQ1 (extensin-2-like OS=Cucurbita maxima OX=3661 GN=LOC111487020 PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 7.2e-51 Identity = 109/145 (75.17%), Postives = 123/145 (84.83%), Query Frame = 0
BLAST of Tan0001099 vs. TAIR 10
Match: AT1G23050.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 66.6 bits (161), Expect = 1.9e-11 Identity = 48/122 (39.34%), Postives = 62/122 (50.82%), Query Frame = 0
BLAST of Tan0001099 vs. TAIR 10
Match: AT1G70985.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 64.3 bits (155), Expect = 9.3e-11 Identity = 46/108 (42.59%), Postives = 62/108 (57.41%), Query Frame = 0
BLAST of Tan0001099 vs. TAIR 10
Match: AT5G49280.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 58.2 bits (139), Expect = 6.7e-09 Identity = 48/131 (36.64%), Postives = 62/131 (47.33%), Query Frame = 0
BLAST of Tan0001099 vs. TAIR 10
Match: AT3G06750.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 52.8 bits (125), Expect = 2.8e-07 Identity = 37/89 (41.57%), Postives = 44/89 (49.44%), Query Frame = 0
BLAST of Tan0001099 vs. TAIR 10
Match: AT4G16140.1 (proline-rich family protein ) HSP 1 Score: 48.9 bits (115), Expect = 4.1e-06 Identity = 44/123 (35.77%), Postives = 61/123 (49.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|