Tan0001071 (gene) Snake gourd v1

Overview


Name	Tan0001071
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Reverse transcriptase
Location	LG08: 19972751 .. 19982771 (-)
RNA-Seq Expression	Tan0001071
Synteny	Tan0001071

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCACCACGTACTAGCAGGCAGCGACGCGGGGATCGAAGGCGGGACGCAGATCCTACCCAAGGCCAATCTGAGAGGGGATCTAGGGCCCCGAGAGTCCAAACTGAGTCCAGAGATCAACATGTCATTTCCTCACAGGAGGTAGGCAGGCCAGAGAGAGCAGGGCCAAGTGATCCAGAGAAGGCATATGGAATAGAACGACTGAAGAAATTGGGAGCCACAGTGTTTGAGGGTTCCACAGATCCGGTGTGCCGAGGTTCATTTGAATAAGTTTGAGAAATGTTTTGACGTGATGAGTCGCCCGAGGAGCGTAAAGTCAAGCTAGCCACATTCTGCTAGAGAAAGAAGCGAGAGGATGGTGGAAATCAATTTTAGCCAGACGGAGTGATGCACGCACTTTAGATTGGCAAACTTTCAGAGGCATATTTGAAGATAAATATTACCCTGGCACATACCGCGAGGCGAAGAGGGATGAATTTTTAGAATTGAAGCAAGGGTCACTATCAGTGGCTGAGTATGAGAGAAGGTATACCGAGCTATCACGGTATGCTGATGTTATTGTGGCATCCGAGAGTGACAGTGTCGACGATTTGAAAGGGATTACGTCCCGAAATACGTACCAAGTTCTGATCATTGCTAAGTGGACCGACTTCTCCGAAAAGTGGTAGAGACTACTACGTGTTGAGAGAGTATAGCGAGGCGCAATCGATAATGGAGCCAACTCGTGGGCCTTCAACAACGAAAGCGATTTTTGGGGGTCGTGAGCGGCGAAGATTCACACTGAGTAAATGTTTCAAGTCGTCGAGAATGTGTGTCGACGATTTGAAAGGGATTACGTCCCAAATACGTACTCAAGTTAGTTCTGACCATTGCTAAGTGGTGACTTCTCCCGGTGGTAGAAGCGCTTCACGTGTTGAGCAGAGTATAGCAGAGGCGCAATCAGTAATGGAGCCAACTCGTGGGCCTTCAACAACGAGCAGTTTTCGGGGTCGTGAACAGAGAAGATTCACACCTGGAGTAAATGTTTCAAGTCGTCAGGACTTTAACAATCGAGCTGGCGGCCAGACATCGAGACAGATGAATGTTAGTGGTGCCTATCAGAGGCAGAGTCAGAGAGCACCTAGTCAGTCTGCCATATCCACAGCAAGACCACAGACAATGCAGGAGTCTGTTGCCAGTGCAGCAAGGAGAACCCCATGTGCAAATTGTGGTAAGAATCATCGAGGCCAATGTCTTGTTGGTGTCGGTGTGTGTTACCAGTGTGGACAGCCAGGGCATTTCAAAAGGGATTGTCCACAACTTAGAGCAGCCACACAGAGGGACTAGGGAGTTGGATCCCAAACAGTTGAGCAGCCGAGAGTTCCAGTAGCTGCAGGAGAGGGCACCAGTGGTGCAAAGCAGAAAGGAGTTGTAGGGAGACCTAGGCAACAGGGAAAAGTCTACGTTATGACTCAGCAAGAAGTAGAGGATGCACCAGATGTGATTACTGGTACGATTTCTATTTGTAATGTACTTGCACGTGTTTTGATAGATCCAGGTGCTACGCATTCCTTTGTTTCTAGTATATTTCTGACTAAGCTGAATAGGAAGCTAGAGCCTTTATTTGAGAGGTTAGTTATATACACACCAGTTGGTGATGCCTTACTTGTCGATGTAGTGTTGCGAGATTGTGAGGTCTTAGTAGAAGGTCTCAATATGTTAGTGGATCTTCTTCCACTAGAGTTGCAGGTGTTAGATGCAATCTTAGGGATGGATTTCTTATTCACTCATTATACTTCCATGGATTGCCATAGAAAGGAAGTTGTTTTTACAAAATCAGGATTGGCTGAAGTGGTTTTCAGGGGTGAAAAGAAGATTATTCCTACGAGTTTGATTTCAGCATTAAAAGCGGAGAAGTTGTTGAGAAAAGGTTGCACAGCGTTTCTTGCACACGTAGTGGAGGTGCAGGAAGAAAAGCTAAAACCAGAAGATGTTCTTGTTGTGAACGAGTTTCTTGATGTTTTTCCAGCAAATCTGTCAGGGTTGCCACCTGATAGGGAAGTAGAGTTCACTATTGAATTGCTACCAGGAACAACACCTATTTCGCAAGCGTCGTATAGAATGGCTCCAAGTGAGCTCAAGGAGTTGAAAATGCAGTTACAAGAACTAGTTGATAAGGGATACATCAGACCTAGTGTATCGCCTTGGGGAGCTCCAGTGTTATTTGTAAAGAAGAAAGATGGTACCCTTAGATTATGCATTGATTACAGACAGTTAAACAAAGTCACGATACGTAACAAGTATCCTTTGCCCCATATAGATGACTTGTTTGACTAGTTACGAGGAGCATCAGTGTTTTCTAAGATTGATTTGAGATCAGGATACCACCAGTTAAAGGTAAGGGAATCAGATATTCCTAAGACAGCATTCAGAACCAGGTACGGGCATTATGAGTTTTTAGTAATGTCGTTCGGTTTGACGAATGCACCAGCAGTTTTCATGGACCTCATGAACAGAATATTCTATCAGTATTTGGATCAAGTTGTGATAGTATTTATTGATGATATACTAGTTTACTCAGTTGACAGAAAAGCTCATGAGGAACATTTGAGGATTATTCTGCAAACACTACGAGATAAACACTTGTACGCTAAATTCACCAAATGTGAGTTTTGGTTGAATCAGGTAGTGTTTTTGGGGCATGTTGTCTCAGCAAATGGTGTTAGTGTGGATCCAAATAAAGTTAAAGTCAGAGTCAACTGGGAGAGACCAGGTTAGTGCGATTGCAGGTAACGTAGTTTCCTAGGCTTGGCAGGATACAACAGGCGGTTTGTTGAGGATTTCTCACGATTAGCATTACCCTTAACTTTAACAAGAAAGAATGCTAAGTTTGAATGGTCAGATAAGTGTGAACAGAGTTTTCAGGAGCTGAAAAAGAGATTAGTTACAACACCTATTCTGACACTTCCTGTAACAGGAAAAGAGTATGTGGTTTACTGTGATGCCTCTAGGCAAGGTTTAGGGTGTGTTCTGATGCAAGAAGGAAAAGTAATTGTAAACCGGAGATCATTCTTTGGATTTTCCTTATAAAAAAAAACAAAAGAAAAGAAGAAATGAAGTGAAAGACAAAAGGAAAACAAGGAAGGAAAAGATTAAACCATTTTGGTTTGCTTTGCTTTAAAGATAAAGAAGGAAAGAAAATGAAAGAAATGTTTATTATATTAAGTTTTGTTTTGTTTTGTAAACAAAAGAAAAGGAAAAGTTTAATATATGTTGGCTTTGTGTTGTTTTAAAAAGAAAAGAAAAGAAATAAGGAGATAAAGGAAAGAAATGAAAAAGAAAAAGAAAAGAAAAAGCAAAAAGACAAAAGGACAAACCCCACCGTTTGAATTACTTTAACCATCTTCTCTCCTTTTGCTTCTCATTTTTTAAAAAGGAAATCTGGGGGCTCGTGGGAGAAGGATGAAGGAAGAGGAAGAAGGTGTTTTTCTTTTGTTTTTTGAGTTGAAGTTGCAGAAGAAGGGAAGAGAAACCAAGTCATGTTAGTATGGCAGCAAGATGAATAATTCAGCCAAGTTTTGATGTTTTAATCATTTCGAGCTCAACAAGAAGAGGTAAGAGTTTAGATTTTGTTTCTTTAAAGTTAATTCATTTTTGAACAAAATTCGTGAAGGAAGCTCGAGTCAATTCTAACCTTAAGTTGCTGTTTTGTGAAGAGGAAGACAGAAGACAGAATTTGCTGTCAAATCCGAGAAGTCTCTGATATTTTGGTTGTACTGAACTGTATACTTGGAGTTAGAAGCTCTAGTGGGTATGGTTCGAAAGCTTATTGAATTGCCTTCAACTTTCGTGAAGATATCGTGAGTAGAAAATGTCTAGAACATGTTTTAAATATCAGGTTAAATTTGTTGTGCAGCAGGAAATCCGAATATGGAAACAGCAGAAATTAGTTCCTGGGAAAGAAGCTTTCGAGGTATTTTTTAACAAATCCGTTGGGAATCGCAATTTCATGTCTTCATATGATTTTTAGAGGGTTCAAAACGGTAGAGTTTGGTATAAATTACATTATTTTTGGATAAGTAATGAAGAAGTTATGACTGTCTGAAAACATGACATAAAATCTGAAAATGCTGGAAATGTTGAAAGTGTGTTTTCTTGTAAGTTTAAGGTTAAAAAGCATGAGCTCAAGGTTCTAATGGTTGAATTTGGTTTGTTTGACAGACCAAGAGCAAATAGGTCGAGTGTACGGGCCAAGGTTCTAGTTTAACACTGTGAGTGACAAAACGAACTTCAAAAGTGTTTATATACTTGAATTATGTTTTAGGAAATGCAAGTTTTGCTAGAATGAAAGTTTTCAATGCTTTATGCTTTCTTTTTGAGCACATGTTTATGAGTATTCATGTTTTCCTAGAAATGTTTTCAAGTATTCATTGTGAGCCTAAATGTCTTGATGAAATTTATACATGAGCATATGTTTATTGAATTTTCAAAGTTTATGGAAATGCTATGATTTCGAGCAAGTATGTTTAGCAAGTATGATCTAAAGATTTCTTGTTTTATGAACAAGCTGAGTAAGCTTGAGTTTTATGAAAGAAAAGATAAGCAGGCATGTTCAAATGTTTTCATGTGATTTTCTGAGATATTGAGCCCGAGGCTTTATGGTACCGTGTGCACATAGGTCTTATTCTGTTGTCGACGTTGAGTGTACTCCGTGACAATAGCGCTGTCGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCAATACATCGTAGAACAAACATTGGTTGTACTGGGCGTGCCCTACACAACGTAGATTGTGACATGTTTTAAAAAGAGTTTATATCATTTACATGCCTTACGAGATTTTAACGATATACTTGCTGGTTTTCTGAAAAGCTATTATGATTACACAATTACTTTTAACGCTTGATTACAGATGCATATGCTCATAGATGGCCAGGTGATAAGATTTACGAGTTAGTAGTTTCCTTTTAAACTCAACTCACCCACTGAGCTTCATAGCTTATTCTTTCAGTGTTTTACCACTTTTCAGGTAGGATCGAGCTCCCGGTGCCTGATAACCTGCCATAGTCTGCTGGAAGCTCCAAGAGTTTGATACTTTATACGTGGGTGGAGATGTATAGGAAGTCTATATGTATTGTAGAAGGACTTTGAAGTTATGTTTATGTGTACATTCTAGGTTGTGGCTGTGTAAGCCATGGTTGGGTATGTTTACAGTTGTGATGTTCATATCTCTTTCAGTTTTCCAGAGAGTCTTAAGTAGGGTTACCCCTTAGTAGGTTACGTAATTGTCAATATTCCGCTGTGTTATGTTTAAGTGTTTCTTATACAAGTTTAGTGTGCTTATCGGGTAAAGCACAGGTCAGCAGTATCGTTAGAGAGGTGAGCGATGTCCATTGGCGGTGTTTTAGTTCATAATCGTTGGAGGAATTCGTAGTATACGAAGGAGCACGAAGAGTTCGTGGATTTGGAGAAGATATTGTGAAGAAAAGTCTTCAACAAGTAAGTAAAACCCTTTCTTACTGTTTTTCTTCTTCTTAATTGCATGTTTAGCCTAGATCTATGTATTAGATCAATTTTAACAAAGACGGTTTGCGTAATTGATACATCGACGATTCAATCGTCTTTTCGCACGCACGGGATTTTCATTCCCTTCAATTGGTATTAGAGCCATTTTGATGGTTTCTTAATTATGCAATTATTTTGTTAAAATTTGGTGGGTATTTTACCATAATTCATGAGATGAATGTCTTGGTTTGCATAATGGATGTTTTGTTTTTGGCACTTTTAGATTTATTTTACGTTTGATGAGATCAAATGTAAAGAGCCCGTGTTTTTGGGCAATTTAGAAAATAAATCGAGTCCGTAAGTCCGTGTCATTCGTGGCAAGTGTTCTTTGTGAACAAATCGGAGCGAAGCAAAGTGAAATCGACGAAGAAACGGCAAAGGAGTTTTCTTTGCATTCGCCGATGGCGTTGAGACGCCGCCGGCGGCGTCTCTCAACGCCGTCCCTGCGGTTGGAGGTCCTATGCGTATCAGCAGCGTTGTAACGCTACCTGGCGTTGAGAACGCGGGTCGACATTTGGAGACGACAACGCGGTAACGCCGCGCACTTGCGGCGTTACAACGTATGCACGCGTTGAGGAGCGAGCCATGGCGATTACGCAGGTCGTGAGTTTAAGGCTTGACTTGGGCGGTTTTCACACGTTTTATTTATTTTTTTCATAAAATGTATTTTATTTTAACTTTTTAATTTAATTATTTTATTAAATAATATTAATATAAATGTTATATTAATGTTATTTAATTTAATAATTGCTTCTAGGTGTCAAAAATCGGTCCATTTTTGCTATTTAATTATTTTATGCATGAGATGTATATTTTAATTAATTTCTATGTGCATTATGTATGTCATATAGATTTAAAATCCCACCTTAGGTTAAACATTTCATGCATCATTTTTATATTATAAGAGTTATAATATATAGTATGCATGATAGGATTATATTATAAGACTTATAATATAATGTTTGCATGTTTTAATTTAATTAAATATAAGTGTTATATTTTTAAATTAAAAGCATGCTCATGCATTTAGTTCATGTGATGAATTATATTATGTTATAGTATATAGTATTATTCATGTGATGGATGATCAAGCACTATAACATAGAAATGCATGCAACCTAAGTTAATTATTAGTTTTAAAGTGTTTAGAACTTGAATAATTAGACTTAGGTTTTCTAATTTTCTAATGAGATTAGAAATTTAGGAAATCAAATATGACCTTTGAATGGAGACTGATAAGTAACTCTGTCTAAGGAAGGTTTTGTCTAAGGCTGGGGTATTTAAGTTGACGCTTGCGGAACACCCTACCTGGAAACTGGCCTGAGAGTGAATTCGGTCCGGAGATTCTTAGGTTATATTCTCGTGAGTGTCGTTAATTAAGTGTTAATTAATTTACTCACATAGACCTAAGTTAATAATGTGATTATAAACTTAAGTTAATACCATATAAGAGTTATATTGGTAGACTTAGGTAAATTTTAGCCGGTTTATCTAGGTCAATCCCTAATAAAATTTAAAGTGTTGAGTGGGAGGAAATAAAGTGTAAGAGATACATTTGAATTTCCAACCACAAATCTCCTTTAAGTCCGCACCGTGAGATCTATACTCGCCCTCGTGGCGCAAATGGGAGCGTCCCCCTTCGAATGGCATTTGTATAGGTCAGTATCATCGTGGATGGAGAGAGTACTTATGGTGAGTGGGAGCGGGACTTGTGAAAACGAGACCCACGGTCTCTTCTTTCGATTCACACAGTAAGACCCCTATGATCTACCTGCAAGTTTGGCCTGGACCAGACAATCCCTTCGGAGGGCTTGATCATGGGAGCGGAACATCGTGAATTCGAAAAGGATCTGATTTCTTGGTTGGTTTTCCTTCTTGGTTCACCCTTCGATGGCTATTGTTTGGACGGATGCTTGGAAACTTAAAGATTGAGGGTGACACTCACAGAATTCGTTAAGTGTTAATGAATTCGACCGAACAATGGTAATTGGACGCCTAATGGAATAAGAGTTATTCGGGATTAGGGTCCGATCGAGAAAGTCTCGTCCTAGAGGAAAGAGTGTTTGTTCTCTTTGGTGGTGGTCATTCTAAACCTTTAGGGTATCATTGCAAAATTTTGATTGACTTAGGGTTCATGAAACAAATTTTGCTAAAATTTGATTGGATTTCAAAAGTTTTTTTAAGTAGACTCGATACAAAGGTTTTCTTATTTTTCAAACTAAAAATGTCTAGCGCAATTATAACTTTTTACTCGCCGGACAAATTAGTGGGAGATAACTATCAATGTTGGAAAATGTGAATAGAAGTTTAGTATTGTGTATTTGAGTTAAGTATCCATAGCATGTCTAATATGTTGATATGTTATAGGAGTCATGCCACCACGCACTAGCGCACGCACGCAGCGGGATCGGGGCGGGACGCAGATCCTACCCCAAGGCCAATCTCGAGAGAGGGATCTAGGGCCCCGAGAGTCCAAACTGAGGCCAGAGATCAACATGTCATTTCCTCACAGGAGGTAGGCAGGCCAGAGAGAGCAGGGCCAAGTGATCCAGAGAAGGCATATGGAATAGAACGACTGAAGAAATTGGGAGCCACAGTGTTTGAGGGTTCCACAGATCCAGCTGACGCTGAGGTTTGGCTGAATAAGTTTGAGAAATGTTTTGACGTGATGAGCTGCCCTGAGGAGCGTAAAGTCAAGCTAGCCACATTCCTGCTAGAGAAAGAAGCAGAGGGATGGTGGAAATCAATTTTAGCCAGACGGAGTGATGCACGCACTTTAGATTGGCAAACTTTCAGAGGCATATTTGAAGATAAATATTACCCTGGCACATACCGCGAGGCGAAGAGGGATGAATTTTTAGAATTGAAGCAAGGGTCACTATCAGTGGCTGAGTATGAGAGAAGGTATACCGAGCTATCACGGTATGCTGATGTTATTGTGGCATCTGAGAGTGACAGGTGTCGACGATTTGAAAGGGGATTACGTCCTGAAATACGTACCCAAGTTACAGTCATTGCTAAGTGGACTGACTTCTCCGAGCTGGTAGAGACTACTCTACGTGTTGAGCAGAGTATAGCAGAGGCGCAATCAGTAATGGAGCCAACTCGTGGGCCTTCAACAACGAGCAGTTTTCGGGGTCGTGAACAGCGAAGATTCACACCTGGAGTAAATGTTTCAAGTCGTCAGGAATAGGTGTCGACGATTTGAAAGGGGATTACGTCCTGAAATACGTACCCAAGTTACAGCCATTGCTAAGTGGACTGACTTCTCCCAGCTGGTAGAGACTGCTCTACGTGTTGAGCAGAGTATAGCAGAGGCGCAATCGATAATGGAGCCAACTCGTGGGCCTTCAACAACGAAAGCGATTTTGGTCGTGTCGAAAGCAGAGAAGATTCACACCTGGAGTAAATGTTTCAAGTCGTCAGGACTTTAACAATCGAGCTGGCGGCCAGACATCGAGACAGATGAATGTTAGTGGTGCCTATCAGAGGCAGAGTCAGAGAGCACCTAGTCAGTCTGCCATATCCACAGCAAGACCACAGACAATGCAGAGTTCATTTGCGGCAAAGCAAGGAGAACCCCATGTGCAAATTGTGGTAAGAATCATCGAGGCCAATGTCTTGTTGGTGTCGGTGTGTGTTACCAGTGTGGACAGCCAGGGCATTTCAAAAGGGATTGTCCACAACTTAGAGCAGCCACACAGAGGGACTAGGGAGTTGGATCCCAAACAGTTGAGCAGCCGAGAGTTCCAGTAGCTGCAGGAGAGGGCACCAGTGGTGCAAAGCAAGAAAGGAGTTGTAGGAGACCTAGGCAACAGGAAAAGTCTACGTTAATACTCAAGCAAGAAGTAGAGGATGCACCGGATGTGATTACTGGTACGATTTCTATTTGTAATGTACTTGCACGTGTTTTGATAGATCCAGGTGCTACGCATTCCTTTGTTTCTAGTATATTTCTGACTAAGCTGAATAGGAAGCTAGAGCCTTTATTTGAGAGGTTAGTTATATACACACCAGTTGGTGATGCCTTACTTGTCGATGTAGTGTTGCGAGATTGTGAGGTCTTAGTAGAAGGTCTCAATATGTTAGTGGATCTTCTTCCACTAGAGTCAGCAGTGTTAGATGCAATCTTAGGGATGGATTTCTTATTCACTCATTATACTTCCATGGATTGCCATAGAAAGGAAGTTGTTTTTACAAAATCGGGATTACCAAGTGGTTTTCAGGGGTGAAAAGAAGATTATTCCTACGAGTTTGATTTCAGCATTAAAAGCGGAGAAGTTGTTGAGAAAAGGTTGCACAGCGTTTCTTGCACACGTAGTGGAGGTGCAGGAAGAAAAGCTAAAACCAGAAGATGTTCTTGTTGTGAACGAGTTTCTTGATGTTTTTCCAAAGAAATCATTGTGGTTGCCACACGATAGGAAGTAG

mRNA sequence

ATGCCACCACGTACTAGCAGGCAGCGACGCGGGGATCGAAGGCGGGACGCAGATCCTACCCAAGGCCAATCTGAGAGGGGATCTAGGGCCCCGAGAGTCCAAACTGAGTCCAGAGATCAACATGTCATTTCCTCACAGGAGGTAGGCAGGCCAGAGAGAGCAGGGCCAACCAGACGGAGTGATGCACGCACTTTAGATTGGCAAACTTTCAGAGGCATATTTGAAGATAAATATTACCCTGGCACATACCGCGAGGCGAAGAGGGATGAATTTTTAGAATTGAAGCAAGGGTCACTATCAGTGGCTGAGTATGAGAGAAGGTATACCGAGCTATCACGGTATGCTGATGTTATTGTGGCATCTGAGAGTGACAGGTGTCGACGATTTGAAAGGGGATTACGTCCTGAAATACGTACCCAAGTTACAGTCATTGCTAAGTGGACTGACTTCTCCGAGCTGGTAGAGACTACTCTACGTGTTGAGCAGATAAATGTTTCAAGTCGTCAGGACTTTAACAATCGAGCTGGCGGCCAGACATCGAGACAGATGAATGTTAGTGGTGCCTATCAGAGGCAGAGTCAGAGAGCACCTAGTCAGTCTGCCATATCCACAGCAAGACCACAGACAATGCAGAGTTCATTTGCGGTCTTAGTAGAAGGTCTCAATATGTTAGTGGATCTTCTTCCACTAGAGTCAGCAGTGTTAGATGCAATCTTAGGGATGGATTTCTTATTCACTCATTATACTTCCATGGATTGCCATAGAAAGGAAGTTGTTTTTACAAAATCGGGATTACCAACATTAAAAGCGGAGAAGTTGTTGAGAAAAGGTTGCACAGCGTTTCTTGCACACGTAGTGGAGGTGCAGGAAGAAAAGCTAAAACCAGAAGATGTTCTTGTTGTGAACGAGTTTCTTGATGTTTTTCCAAAGAAATCATTGTGGTTGCCACACGATAGGAAGTAG

Coding sequence (CDS)

ATGCCACCACGTACTAGCAGGCAGCGACGCGGGGATCGAAGGCGGGACGCAGATCCTACCCAAGGCCAATCTGAGAGGGGATCTAGGGCCCCGAGAGTCCAAACTGAGTCCAGAGATCAACATGTCATTTCCTCACAGGAGGTAGGCAGGCCAGAGAGAGCAGGGCCAACCAGACGGAGTGATGCACGCACTTTAGATTGGCAAACTTTCAGAGGCATATTTGAAGATAAATATTACCCTGGCACATACCGCGAGGCGAAGAGGGATGAATTTTTAGAATTGAAGCAAGGGTCACTATCAGTGGCTGAGTATGAGAGAAGGTATACCGAGCTATCACGGTATGCTGATGTTATTGTGGCATCTGAGAGTGACAGGTGTCGACGATTTGAAAGGGGATTACGTCCTGAAATACGTACCCAAGTTACAGTCATTGCTAAGTGGACTGACTTCTCCGAGCTGGTAGAGACTACTCTACGTGTTGAGCAGATAAATGTTTCAAGTCGTCAGGACTTTAACAATCGAGCTGGCGGCCAGACATCGAGACAGATGAATGTTAGTGGTGCCTATCAGAGGCAGAGTCAGAGAGCACCTAGTCAGTCTGCCATATCCACAGCAAGACCACAGACAATGCAGAGTTCATTTGCGGTCTTAGTAGAAGGTCTCAATATGTTAGTGGATCTTCTTCCACTAGAGTCAGCAGTGTTAGATGCAATCTTAGGGATGGATTTCTTATTCACTCATTATACTTCCATGGATTGCCATAGAAAGGAAGTTGTTTTTACAAAATCGGGATTACCAACATTAAAAGCGGAGAAGTTGTTGAGAAAAGGTTGCACAGCGTTTCTTGCACACGTAGTGGAGGTGCAGGAAGAAAAGCTAAAACCAGAAGATGTTCTTGTTGTGAACGAGTTTCTTGATGTTTTTCCAAAGAAATCATTGTGGTTGCCACACGATAGGAAGTAG

Protein sequence

MPPRTSRQRRGDRRRDADPTQGQSERGSRAPRVQTESRDQHVISSQEVGRPERAGPTRRSDARTLDWQTFRGIFEDKYYPGTYREAKRDEFLELKQGSLSVAEYERRYTELSRYADVIVASESDRCRRFERGLRPEIRTQVTVIAKWTDFSELVETTLRVEQINVSSRQDFNNRAGGQTSRQMNVSGAYQRQSQRAPSQSAISTARPQTMQSSFAVLVEGLNMLVDLLPLESAVLDAILGMDFLFTHYTSMDCHRKEVVFTKSGLPTLKAEKLLRKGCTAFLAHVVEVQEEKLKPEDVLVVNEFLDVFPKKSLWLPHDRK

Homology

[Close]

BLAST of Tan0001071 vs. NCBI nr
Match: KAA0051980.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK04577.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 319.7 bits (818), Expect = 2.9e-83
Identity = 227/518 (43.82%), Postives = 258/518 (49.81%), Query Frame = 0


Query: 1   MPPRTSRQRRGDRRRDADPTQGQSERGSRAPRVQTES-RDQHVISSQEVGRPERAGPTR- 60
           MPPRTSR+RR ++ R  DPTQGQSERGS  PR Q E+  ++ V S+QE+GR ERA P+  
Sbjct: 151 MPPRTSRRRRQNQDRMQDPTQGQSERGSSTPRGQNEAGSERFVRSAQEIGRSERARPSDP 210

Query: 61  -----------------------------RSDARTLDWQTFRGIFEDKYYPGTYREAKRD 120
                                         +DARTLDWQTFRGIFE+KYYP T  EAKRD
Sbjct: 211 EKMYGIERLKELGATVFVGSTDLADAEVWHNDARTLDWQTFRGIFEEKYYPTTCCEAKRD 270

Query: 121 EFLELKQGSLSVAEYERRYTELSRYADVIVASESDRCRRFERGLRPEIRTQVTVIAKWTD 180
           EFLELKQGSLSVA+Y+R+YTELS YA+VI+ASESDRCRRFERGL  EIRT VT IAKWTD
Sbjct: 271 EFLELKQGSLSVAKYKRKYTELSWYAEVIMASESDRCRRFERGLHFEIRTPVTAIAKWTD 330

Query: 181 FSELVETTLRVEQ--------------------------------INVSSRQDFNNRAGG 240
           FS+L+ET LRVEQ                                +N+S  QDF  R GG
Sbjct: 331 FSQLIETALRVEQSIVEEKSAMELSRGVSTTSRIRGREQRRSTPGVNISGCQDFKRRLGG 390

Query: 241 QTSRQMNVSGAYQRQSQRAPSQSAISTARPQTMQSSFA---------------------- 300
           +  RQM+   AYQRQSQRA SQ   S ARP+T Q S A                      
Sbjct: 391 KPLRQMSSGSAYQRQSQRASSQFTNSVARPRTGQESVASESRRTPCVSCSKSHRGQCLVG 450

Query: 301 ------------------------------------------------------------ 321
                                                                       
Sbjct: 451 AGVCYQCGQTGHFKRDCPQLRVGVQRDQGVESHTVEQPRILAAAREGTSGARQKRVVGRP 510

[Close]

BLAST of Tan0001071 vs. NCBI nr
Match: KAA0056288.1 (uncharacterized protein E6C27_scaffold226G00600 [Cucumis melo var. makuwa] >TYK05213.1 uncharacterized protein E5676_scaffold108G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 305.8 bits (782), Expect = 4.3e-79
Identity = 217/505 (42.97%), Postives = 245/505 (48.51%), Query Frame = 0


Query: 1   MPPRTSRQRRGDRRRDADPTQGQSERGSRAPRVQ-TESRDQHVISSQEVGRP-------- 60
           MPPRT R+RR ++     PTQG S   S   RV+     +Q   +++E+GRP        
Sbjct: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESNTLRVRGGVGNEQFARTAEEIGRPIEQSLCFD 60

Query: 61  -------------------ERAG-----PTRRSDARTLDWQTFRGIFEDKYYPGTYREAK 120
                              E  G       RRSDAR L+WQTFRGIFEDKYYP TY EAK
Sbjct: 61  VMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARALNWQTFRGIFEDKYYPNTYCEAK 120

Query: 121 RDEFLELKQGSLSVAEYERRYTELSRYADVIVASESDRCRRFERGLRPEIRTQVTVIAKW 180
           RDEFL LKQGSLSVAEYER+YTELSRYADVIVASESDRCRRFERGLR EIRT VT IAKW
Sbjct: 121 RDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRFERGLRFEIRTPVTAIAKW 180

Query: 181 TDFSELVETTLRVEQ--------------------------------INVSSRQDFNNRA 240
           T+FS+LVET L VEQ                                IN+SSRQDF NR+
Sbjct: 181 TNFSQLVETALHVEQSITEEKSAVEFSRGTSTASGFRGREQRRFTPGINISSRQDFKNRS 240

Query: 241 GGQTSRQMNVSGAYQRQSQRAPSQSAISTARPQTMQSSFA-------------------- 300
            GQ SR ++    +Q+QSQR P+Q   ST R Q  Q S A                    
Sbjct: 241 RGQASRNVSYGSVFQKQSQRIPTQPTRSTVRSQPGQESVASTVRRTSCTSCGKNHRDQGV 300

Query: 301 ------------------------------------------------------------ 321
                                                                       
Sbjct: 301 RSQTVEQSRVSVVPTEGTSGARKKGVVGRLRQQGKVYAMTQQEAEDAPDVITGTILICNV 360

[Close]

BLAST of Tan0001071 vs. NCBI nr
Match: KAA0035138.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 305.4 bits (781), Expect = 5.6e-79
Identity = 226/542 (41.70%), Postives = 249/542 (45.94%), Query Frame = 0


Query: 1   MPPRTSRQRRGDRRRDADPTQGQSERGSRAPRVQ-TESRDQHVISSQEVGRPERAGP--- 60
           M PRT R+RR ++     PTQG S   S    V+     +Q   ++QE+GRP+RA P   
Sbjct: 39  MSPRTGRRRRQNQDGMQGPTQGPSLGESSTLGVRGGAGNEQFTRTTQEIGRPDRAEPSNP 98

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 99  KKAYGIERLKKLGATVFEGSTDPVDAENWLNMLEKCFDVMNCPEEQKVRLATFLLQKEAE 158

Query: 121 -------TRRSDARTLDWQTFRGIFEDKYYPGTYREAKRDEFLELKQGSLSVAEYERRYT 180
                  TRRSDAR LDWQTFR IFEDKYYP TY EAKRDEFL LKQGSLSVAEYE++YT
Sbjct: 159 GWWKSILTRRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYEKKYT 218

Query: 181 ELSRYADVIVASESDRCRRFERGLRPEIRTQVTVIAKWTDFSELVETTLRVEQ------- 240
           ELSRYADVIVASESDRCRRFERGLR EIRT VT IAKWT+FS+LVET LRVEQ       
Sbjct: 219 ELSRYADVIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 278

Query: 241 -------------------------INVSSRQDFNNRAGGQTSRQMNVSGAYQRQSQRAP 300
                                    IN+SSRQDF NR+GGQ SR ++    +QRQSQR P
Sbjct: 279 AVELSRGTSTTNGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 338

Query: 301 SQSAISTARPQTMQSSFA------------------------------------------ 321
           SQ   ST R Q  Q S A                                          
Sbjct: 339 SQPIRSTVRSQPGQESIASTVRRTPCTSCGKNHRVQRDQGVRSQTVEKSRVSVVPIEGTS 398

[Close]

BLAST of Tan0001071 vs. NCBI nr
Match: KAA0041132.1 (hypothetical protein E6C27_scaffold128G00450 [Cucumis melo var. makuwa])

HSP 1 Score: 301.2 bits (770), Expect = 1.1e-77
Identity = 210/495 (42.42%), Postives = 234/495 (47.27%), Query Frame = 0


Query: 1   MPPRTSRQRRGDRRRDADPTQGQSERGSRAPRVQTESRDQHVISSQEVGRPERAGPTRRS 60
           MPPRT R+RR            Q++ G + P  + E   + +++             RRS
Sbjct: 39  MPPRTGRRRR------------QNQDGMQGPTQEAEGWWKSILA-------------RRS 98

Query: 61  DARTLDWQTFRGIFEDKYYPGTYREAKRDEFLELKQGSLSVAEYERRYTELSRYADVIVA 120
           DAR LDWQTFRGIFEDKYYP TY EA+RDEFL LKQGSLSVAEYER+YTELSRYADV VA
Sbjct: 99  DARALDWQTFRGIFEDKYYPSTYCEARRDEFLRLKQGSLSVAEYERKYTELSRYADVTVA 158

Query: 121 SESDRCRRFERGLRPEIRTQVTVIAKWTDFSELVETTLRVEQ------------------ 180
           SESDRCRRFERGL  EIRT VT IAKWT+FS+LVET LRVEQ                  
Sbjct: 159 SESDRCRRFERGLHFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTA 218

Query: 181 --------------INVSSRQDFNNRAGGQTSRQMNVSGAYQRQSQRAPSQSAISTARPQ 240
                         IN+SS QDF NR+GGQ SR ++    +QRQS R PSQ   ST R Q
Sbjct: 219 SGFRGHEQRRFTPGINISSSQDFKNRSGGQASRNVSYGSVFQRQSHRIPSQPIRSTVRLQ 278

Query: 241 TMQSSFA----------------------------------------------------- 300
             Q S A                                                     
Sbjct: 279 PGQESIASTVRRTPCTSCGRNHRVEQSRVSVVPTEGTSSVRQKGVVGRPRQQGKVYAMTQ 338

Query: 301 ------------------------------------------------------------ 321
                                                                       
Sbjct: 339 KEAEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVG 398

[Close]

BLAST of Tan0001071 vs. NCBI nr
Match: KAA0042086.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 300.8 bits (769), Expect = 1.4e-77
Identity = 196/412 (47.57%), Postives = 213/412 (51.70%), Query Frame = 0


Query: 58  RRSDARTLDWQTFRGIFEDKYYPGTYREAKRDEFLELKQGSLSVAEYERRYTELSRYADV 117
           RRSDAR LDWQTFRGIFEDKY+  TY EAKRDEFL L+QGSLSVAEYER+ TELSRYADV
Sbjct: 538 RRSDARALDWQTFRGIFEDKYHQSTYCEAKRDEFLGLEQGSLSVAEYERKCTELSRYADV 597

Query: 118 IVASESDRCRRFERGLRPEIRTQVTVIAKWTDFSELVETTLRVEQ--------------- 177
           IVASESDRCRRFERGLR EIR  VT IAKWT+FS+LVET LRVEQ               
Sbjct: 598 IVASESDRCRRFERGLRFEIRITVTAIAKWTNFSQLVETALRVEQSKTEEKSAVELSRGT 657

Query: 178 -----------------INVSSRQDFNNRAGGQTSRQMNVSGAYQRQSQRAPSQSAISTA 237
                            IN+SSRQD  NR+GGQ SR ++    +QRQSQR  SQ   ST 
Sbjct: 658 STASGFRGRKQWRFTSGINISSRQDLKNRSGGQASRNVSYGSVFQRQSQRILSQPTRSTV 717

Query: 238 RPQTMQSSFA-------------------------------------------------- 297
           R Q  Q S A                                                  
Sbjct: 718 RSQLGQESVASTIRRTPCTSCGRNHGGQCLFREIRELGPRQLSNREFQWFQQKAPVVQDV 777

Query: 298 --------------------------------------------------VLVEGLNMLV 321
                                                             +LVEG+++LV
Sbjct: 778 LFNPGATHSFVSSIFLTKLNRMLEPLSKGLAIYTPVGDVLLVNEVLRNCEILVEGISLLV 837

[Close]

BLAST of Tan0001071 vs. ExPASy TrEMBL
Match: A0A5A7U9X4 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002130 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 1.4e-83
Identity = 227/518 (43.82%), Postives = 258/518 (49.81%), Query Frame = 0


Query: 1   MPPRTSRQRRGDRRRDADPTQGQSERGSRAPRVQTES-RDQHVISSQEVGRPERAGPTR- 60
           MPPRTSR+RR ++ R  DPTQGQSERGS  PR Q E+  ++ V S+QE+GR ERA P+  
Sbjct: 151 MPPRTSRRRRQNQDRMQDPTQGQSERGSSTPRGQNEAGSERFVRSAQEIGRSERARPSDP 210

Query: 61  -----------------------------RSDARTLDWQTFRGIFEDKYYPGTYREAKRD 120
                                         +DARTLDWQTFRGIFE+KYYP T  EAKRD
Sbjct: 211 EKMYGIERLKELGATVFVGSTDLADAEVWHNDARTLDWQTFRGIFEEKYYPTTCCEAKRD 270

Query: 121 EFLELKQGSLSVAEYERRYTELSRYADVIVASESDRCRRFERGLRPEIRTQVTVIAKWTD 180
           EFLELKQGSLSVA+Y+R+YTELS YA+VI+ASESDRCRRFERGL  EIRT VT IAKWTD
Sbjct: 271 EFLELKQGSLSVAKYKRKYTELSWYAEVIMASESDRCRRFERGLHFEIRTPVTAIAKWTD 330

Query: 181 FSELVETTLRVEQ--------------------------------INVSSRQDFNNRAGG 240
           FS+L+ET LRVEQ                                +N+S  QDF  R GG
Sbjct: 331 FSQLIETALRVEQSIVEEKSAMELSRGVSTTSRIRGREQRRSTPGVNISGCQDFKRRLGG 390

Query: 241 QTSRQMNVSGAYQRQSQRAPSQSAISTARPQTMQSSFA---------------------- 300
           +  RQM+   AYQRQSQRA SQ   S ARP+T Q S A                      
Sbjct: 391 KPLRQMSSGSAYQRQSQRASSQFTNSVARPRTGQESVASESRRTPCVSCSKSHRGQCLVG 450

Query: 301 ------------------------------------------------------------ 321
                                                                       
Sbjct: 451 AGVCYQCGQTGHFKRDCPQLRVGVQRDQGVESHTVEQPRILAAAREGTSGARQKRVVGRP 510

[Close]

BLAST of Tan0001071 vs. ExPASy TrEMBL
Match: A0A5D3BZQ5 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00180 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 2.1e-79
Identity = 217/505 (42.97%), Postives = 245/505 (48.51%), Query Frame = 0


Query: 1   MPPRTSRQRRGDRRRDADPTQGQSERGSRAPRVQ-TESRDQHVISSQEVGRP-------- 60
           MPPRT R+RR ++     PTQG S   S   RV+     +Q   +++E+GRP        
Sbjct: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESNTLRVRGGVGNEQFARTAEEIGRPIEQSLCFD 60

Query: 61  -------------------ERAG-----PTRRSDARTLDWQTFRGIFEDKYYPGTYREAK 120
                              E  G       RRSDAR L+WQTFRGIFEDKYYP TY EAK
Sbjct: 61  VMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARALNWQTFRGIFEDKYYPNTYCEAK 120

Query: 121 RDEFLELKQGSLSVAEYERRYTELSRYADVIVASESDRCRRFERGLRPEIRTQVTVIAKW 180
           RDEFL LKQGSLSVAEYER+YTELSRYADVIVASESDRCRRFERGLR EIRT VT IAKW
Sbjct: 121 RDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRFERGLRFEIRTPVTAIAKW 180

Query: 181 TDFSELVETTLRVEQ--------------------------------INVSSRQDFNNRA 240
           T+FS+LVET L VEQ                                IN+SSRQDF NR+
Sbjct: 181 TNFSQLVETALHVEQSITEEKSAVEFSRGTSTASGFRGREQRRFTPGINISSRQDFKNRS 240

Query: 241 GGQTSRQMNVSGAYQRQSQRAPSQSAISTARPQTMQSSFA-------------------- 300
            GQ SR ++    +Q+QSQR P+Q   ST R Q  Q S A                    
Sbjct: 241 RGQASRNVSYGSVFQKQSQRIPTQPTRSTVRSQPGQESVASTVRRTSCTSCGKNHRDQGV 300

Query: 301 ------------------------------------------------------------ 321
                                                                       
Sbjct: 301 RSQTVEQSRVSVVPTEGTSGARKKGVVGRLRQQGKVYAMTQQEAEDAPDVITGTILICNV 360

[Close]

BLAST of Tan0001071 vs. ExPASy TrEMBL
Match: A0A5A7SX06 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002230 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 2.7e-79
Identity = 226/542 (41.70%), Postives = 249/542 (45.94%), Query Frame = 0


Query: 1   MPPRTSRQRRGDRRRDADPTQGQSERGSRAPRVQ-TESRDQHVISSQEVGRPERAGP--- 60
           M PRT R+RR ++     PTQG S   S    V+     +Q   ++QE+GRP+RA P   
Sbjct: 39  MSPRTGRRRRQNQDGMQGPTQGPSLGESSTLGVRGGAGNEQFTRTTQEIGRPDRAEPSNP 98

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 99  KKAYGIERLKKLGATVFEGSTDPVDAENWLNMLEKCFDVMNCPEEQKVRLATFLLQKEAE 158

Query: 121 -------TRRSDARTLDWQTFRGIFEDKYYPGTYREAKRDEFLELKQGSLSVAEYERRYT 180
                  TRRSDAR LDWQTFR IFEDKYYP TY EAKRDEFL LKQGSLSVAEYE++YT
Sbjct: 159 GWWKSILTRRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYEKKYT 218

Query: 181 ELSRYADVIVASESDRCRRFERGLRPEIRTQVTVIAKWTDFSELVETTLRVEQ------- 240
           ELSRYADVIVASESDRCRRFERGLR EIRT VT IAKWT+FS+LVET LRVEQ       
Sbjct: 219 ELSRYADVIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 278

Query: 241 -------------------------INVSSRQDFNNRAGGQTSRQMNVSGAYQRQSQRAP 300
                                    IN+SSRQDF NR+GGQ SR ++    +QRQSQR P
Sbjct: 279 AVELSRGTSTTNGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 338

Query: 301 SQSAISTARPQTMQSSFA------------------------------------------ 321
           SQ   ST R Q  Q S A                                          
Sbjct: 339 SQPIRSTVRSQPGQESIASTVRRTPCTSCGKNHRVQRDQGVRSQTVEKSRVSVVPIEGTS 398

[Close]

BLAST of Tan0001071 vs. ExPASy TrEMBL
Match: A0A5A7TCD9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00450 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 5.1e-78
Identity = 210/495 (42.42%), Postives = 234/495 (47.27%), Query Frame = 0


Query: 1   MPPRTSRQRRGDRRRDADPTQGQSERGSRAPRVQTESRDQHVISSQEVGRPERAGPTRRS 60
           MPPRT R+RR            Q++ G + P  + E   + +++             RRS
Sbjct: 39  MPPRTGRRRR------------QNQDGMQGPTQEAEGWWKSILA-------------RRS 98

Query: 61  DARTLDWQTFRGIFEDKYYPGTYREAKRDEFLELKQGSLSVAEYERRYTELSRYADVIVA 120
           DAR LDWQTFRGIFEDKYYP TY EA+RDEFL LKQGSLSVAEYER+YTELSRYADV VA
Sbjct: 99  DARALDWQTFRGIFEDKYYPSTYCEARRDEFLRLKQGSLSVAEYERKYTELSRYADVTVA 158

Query: 121 SESDRCRRFERGLRPEIRTQVTVIAKWTDFSELVETTLRVEQ------------------ 180
           SESDRCRRFERGL  EIRT VT IAKWT+FS+LVET LRVEQ                  
Sbjct: 159 SESDRCRRFERGLHFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKSAVELSRGTSTA 218

Query: 181 --------------INVSSRQDFNNRAGGQTSRQMNVSGAYQRQSQRAPSQSAISTARPQ 240
                         IN+SS QDF NR+GGQ SR ++    +QRQS R PSQ   ST R Q
Sbjct: 219 SGFRGHEQRRFTPGINISSSQDFKNRSGGQASRNVSYGSVFQRQSHRIPSQPIRSTVRLQ 278

Query: 241 TMQSSFA----------------------------------------------------- 300
             Q S A                                                     
Sbjct: 279 PGQESIASTVRRTPCTSCGRNHRVEQSRVSVVPTEGTSSVRQKGVVGRPRQQGKVYAMTQ 338

Query: 301 ------------------------------------------------------------ 321
                                                                       
Sbjct: 339 KEAEDAPDVITGTILICNVPADVLFDPGATHSFVSSIFLTKLNRMLEPLSEGLAIYTPVG 398

[Close]

BLAST of Tan0001071 vs. ExPASy TrEMBL
Match: A0A5D3D3U4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003480 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 6.7e-78
Identity = 196/412 (47.57%), Postives = 213/412 (51.70%), Query Frame = 0


Query: 58  RRSDARTLDWQTFRGIFEDKYYPGTYREAKRDEFLELKQGSLSVAEYERRYTELSRYADV 117
           RRSDAR LDWQTFRGIFEDKY+  TY EAKRDEFL L+QGSLSVAEYER+ TELSRYADV
Sbjct: 538 RRSDARALDWQTFRGIFEDKYHQSTYCEAKRDEFLGLEQGSLSVAEYERKCTELSRYADV 597

Query: 118 IVASESDRCRRFERGLRPEIRTQVTVIAKWTDFSELVETTLRVEQ--------------- 177
           IVASESDRCRRFERGLR EIR  VT IAKWT+FS+LVET LRVEQ               
Sbjct: 598 IVASESDRCRRFERGLRFEIRITVTAIAKWTNFSQLVETALRVEQSKTEEKSAVELSRGT 657

Query: 178 -----------------INVSSRQDFNNRAGGQTSRQMNVSGAYQRQSQRAPSQSAISTA 237
                            IN+SSRQD  NR+GGQ SR ++    +QRQSQR  SQ   ST 
Sbjct: 658 STASGFRGRKQWRFTSGINISSRQDLKNRSGGQASRNVSYGSVFQRQSQRILSQPTRSTV 717

Query: 238 RPQTMQSSFA-------------------------------------------------- 297
           R Q  Q S A                                                  
Sbjct: 718 RSQLGQESVASTIRRTPCTSCGRNHGGQCLFREIRELGPRQLSNREFQWFQQKAPVVQDV 777

Query: 298 --------------------------------------------------VLVEGLNMLV 321
                                                             +LVEG+++LV
Sbjct: 778 LFNPGATHSFVSSIFLTKLNRMLEPLSKGLAIYTPVGDVLLVNEVLRNCEILVEGISLLV 837

The following BLAST results are available for this feature:

BLAST of Tan0001071 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0001071 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051980.1	2.9e-83	43.82	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK04577.1 D...	[more]
KAA0056288.1	4.3e-79	42.97	uncharacterized protein E6C27_scaffold226G00600 [Cucumis melo var. makuwa] >TYK0...	[more]
KAA0035138.1	5.6e-79	41.70	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0041132.1	1.1e-77	42.42	hypothetical protein E6C27_scaffold128G00450 [Cucumis melo var. makuwa]	[more]
KAA0042086.1	1.4e-77	47.57	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Tan0001071 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U9X4	1.4e-83	43.82	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3BZQ5	2.1e-79	42.97	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7SX06	2.7e-79	41.70	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7TCD9	5.1e-78	42.42	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold12...	[more]
A0A5D3D3U4	6.7e-78	47.57	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold30...	[more]

BLAST of Tan0001071 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 64..135 e-value: 1.8E-10 score: 40.9
None	No IPR available	PFAM	PF08284	RVP_2	coord: 209..263 e-value: 4.2E-9 score: 36.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 61..211
None	No IPR available	PANTHER	PTHR34482:SF4	POLYMERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 61..211
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 178..274 e-value: 2.7E-6 score: 29.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0001071.1	Tan0001071.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity