Tan0001060 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAATTATATTCTTTCAAAGCTTAAAATTTTCATCCCTGAATCGCGATTAGGGTTTTTTTTTCTCTTCTGCTTCTCGATCGGTTCTTCTCTAAAGCTCCTGTACTTCGCAATTCGATATCGGATTCCCCGCATCGATTGATTAATTCAGCTTCGGTAACTGTCTATTCCATTTCAACCTTTTTGTTTTTTGAATAAATTCGGATCTGGATCTGTAATTTATCATTCGTCCGATTAAATTAAGTAGTTCTTCTTGTTTAGTTCTCATTTCTAGGTGATTATTCATCGGGTTTGCAATCAAATTTCATGTATTGAACTTTCACGTTGCTGTTGATTAGGAATTTATGTTTTTCCTTTCTTGGGTATCTAGGTGATTAATCTATCTCTTCTTTTGGGATAAGATGGGGGCTTTCATTTCGAGATTCTGGTTCATGTTATTTCCGGCAAAGGAATACAAGATCGTGGTCGTTGGGTTGGATAATGCCGGAAAGACGACGACTCTTTACAAATTGCACTTGGGAGAGGTTGTTACTACCCATCCGACTGTTGGAAGCAATGTTGAAGAACTTGTATATAAGAATATCCGATTCGAGGTACAGTCAATCTATCAATTTACTCCTATTTTGCCTTTTTCTGGTTCTATTTTTTATGAATGCTCCTTGTTTGTTGTTCATTATATTCAATCCATTGGGGATTATTTTCCTCGATCAACTTTATGCTAGTATTCTATTTGATTATTGGTTTGGTGTGGAGTTGTCACTTGATTTACTGAGTCAGTGTATTTGGTTGATGCAAAGGATTAGCGGATTCTTACCCTAGAAAGAAAATGTTGGTGCAAGAAATAGGAACTCGTGTGTTGTATGTAGACCCGATACTTTGCTTGCCATGTCCAAAATTAGTTCGTGATAATATAAAGCAACATATTCCCTTTTTAACTTTCCGAAGGCTACTCTTGTGGAAAGCGAAGCTGGAATATGAGATTTATCCTGGCTTGTATAAGACATATTTCGTAAGAGCATCTAACTGGTAACTTCCCAAAATCCCACACAATTTGCAGCCTTCCTGAAGGGAAATTTTGGGTTGAGTGTGGTTTCTTCAATATTGGGCTGGTTTATATTTGCCAAACAAAGAAAATGGAATCCAGAGTGATTGTTGGAAAAGCATATTCTAGTTATTCTAAACTTGTTATATTGGAAACTTTGCACACATCCTTTCAGTTCCTCATTTTGGAAGGCCAAACTGAACATTTTCCCTCAGATGCCGAATAGCTGAACCTTTTTTTTGGGGCTATGTTCTCTCTAGGTATGGGATCTTGGTGGGCAAGAGAGGCTTCGGACATCATGGGCAACATATTACCGCGGAACTCATGCAGTGATTGCGGTGATAGACAGCACAGATAGAGCGAGAATCACCATTATGAAGGACGAGCTCTTCAGACTACTCGGTCATGAAGATCTTCAGCAATCTGTGGTTCTGATTTTTGCAAACAAACAGGATCTCAAGGATGCCATGACTCCAGTTGAAATCACTGATGCTCTTTCACTTCACAGCATCAAGAATCACGACTGGCACATCCAAGCCTGCTCTGCCCTCACCGGAGACGGTCTATACGACGGTCTTGGGTGGATTGCTCAGCGAGTTACGGGTAAAGCACCAAGTTGATAAGGAACTCACTGCTTGTGGGGTTCATTCTTATTTGTAATCTTGTGGTTAAACTCGCCTTTTGTCTCATTTTACATAAGTTTACATGTCCCTTTCAATTCCATTTTGATTTCAGAGAGTTGTACTAAATTAACAAAAATGGAGCAATATAAAGGAGGAGTTAGTGTCGTTCC CAAAATTATATTCTTTCAAAGCTTAAAATTTTCATCCCTGAATCGCGATTAGGGTTTTTTTTTCTCTTCTGCTTCTCGATCGGTTCTTCTCTAAAGCTCCTGTACTTCGCAATTCGATATCGGATTCCCCGCATCGATTGATTAATTCAGCTTCGATGGGGGCTTTCATTTCGAGATTCTGGTTCATGTTATTTCCGGCAAAGGAATACAAGATCGTGGTCGTTGGGTTGGATAATGCCGGAAAGACGACGACTCTTTACAAATTGCACTTGGGAGAGGTTGTTACTACCCATCCGACTGTTGGAAGCAATGTTGAAGAACTTGTATATAAGAATATCCGATTCGAGGTATGGGATCTTGGTGGGCAAGAGAGGCTTCGGACATCATGGGCAACATATTACCGCGGAACTCATGCAGTGATTGCGGTGATAGACAGCACAGATAGAGCGAGAATCACCATTATGAAGGACGAGCTCTTCAGACTACTCGGTCATGAAGATCTTCAGCAATCTGTGGTTCTGATTTTTGCAAACAAACAGGATCTCAAGGATGCCATGACTCCAGTTGAAATCACTGATGCTCTTTCACTTCACAGCATCAAGAATCACGACTGGCACATCCAAGCCTGCTCTGCCCTCACCGGAGACGGTCTATACGACGGTCTTGGGTGGATTGCTCAGCGAGTTACGGGTAAAGCACCAAGTTGATAAGGAACTCACTGCTTGTGGGGTTCATTCTTATTTGTAATCTTGTGGTTAAACTCGCCTTTTGTCTCATTTTACATAAGTTTACATGTCCCTTTCAATTCCATTTTGATTTCAGAGAGTTGTACTAAATTAACAAAAATGGAGCAATATAAAGGAGGAGTTAGTGTCGTTCC ATGGGGGCTTTCATTTCGAGATTCTGGTTCATGTTATTTCCGGCAAAGGAATACAAGATCGTGGTCGTTGGGTTGGATAATGCCGGAAAGACGACGACTCTTTACAAATTGCACTTGGGAGAGGTTGTTACTACCCATCCGACTGTTGGAAGCAATGTTGAAGAACTTGTATATAAGAATATCCGATTCGAGGTATGGGATCTTGGTGGGCAAGAGAGGCTTCGGACATCATGGGCAACATATTACCGCGGAACTCATGCAGTGATTGCGGTGATAGACAGCACAGATAGAGCGAGAATCACCATTATGAAGGACGAGCTCTTCAGACTACTCGGTCATGAAGATCTTCAGCAATCTGTGGTTCTGATTTTTGCAAACAAACAGGATCTCAAGGATGCCATGACTCCAGTTGAAATCACTGATGCTCTTTCACTTCACAGCATCAAGAATCACGACTGGCACATCCAAGCCTGCTCTGCCCTCACCGGAGACGGTCTATACGACGGTCTTGGGTGGATTGCTCAGCGAGTTACGGGTAAAGCACCAAGTTGA MGAFISRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQERLRTSWATYYRGTHAVIAVIDSTDRARITIMKDELFRLLGHEDLQQSVVLIFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQRVTGKAPS Homology
BLAST of Tan0001060 vs. ExPASy Swiss-Prot
Match: Q55AD9 (ADP-ribosylation factor-like protein 5 OS=Dictyostelium discoideum OX=44689 GN=arl5 PE=3 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 2.0e-60 Identity = 110/180 (61.11%), Postives = 142/180 (78.89%), Query Frame = 0
BLAST of Tan0001060 vs. ExPASy Swiss-Prot
Match: Q9Y689 (ADP-ribosylation factor-like protein 5A OS=Homo sapiens OX=9606 GN=ARL5A PE=1 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 1.0e-56 Identity = 102/177 (57.63%), Postives = 134/177 (75.71%), Query Frame = 0
BLAST of Tan0001060 vs. ExPASy Swiss-Prot
Match: P51646 (ADP-ribosylation factor-like protein 5A OS=Rattus norvegicus OX=10116 GN=Arl5a PE=2 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 1.0e-56 Identity = 102/177 (57.63%), Postives = 134/177 (75.71%), Query Frame = 0
BLAST of Tan0001060 vs. ExPASy Swiss-Prot
Match: Q80ZU0 (ADP-ribosylation factor-like protein 5A OS=Mus musculus OX=10090 GN=Arl5a PE=1 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 1.8e-56 Identity = 102/177 (57.63%), Postives = 133/177 (75.14%), Query Frame = 0
BLAST of Tan0001060 vs. ExPASy Swiss-Prot
Match: Q2KJ96 (ADP-ribosylation factor-like protein 5A OS=Bos taurus OX=9913 GN=ARL5A PE=2 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 2.3e-56 Identity = 102/177 (57.63%), Postives = 133/177 (75.14%), Query Frame = 0
BLAST of Tan0001060 vs. NCBI nr
Match: XP_008438599.1 (PREDICTED: ADP-ribosylation factor-like protein 5 [Cucumis melo]) HSP 1 Score: 374.0 bits (959), Expect = 7.3e-100 Identity = 180/183 (98.36%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Tan0001060 vs. NCBI nr
Match: KAA0049318.1 (ADP-ribosylation factor-like protein 5 [Cucumis melo var. makuwa] >TYK17240.1 ADP-ribosylation factor-like protein 5 [Cucumis melo var. makuwa]) HSP 1 Score: 374.0 bits (959), Expect = 7.3e-100 Identity = 180/183 (98.36%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Tan0001060 vs. NCBI nr
Match: XP_022138154.1 (ADP-ribosylation factor-like protein 5 [Momordica charantia] >XP_022138155.1 ADP-ribosylation factor-like protein 5 [Momordica charantia]) HSP 1 Score: 371.3 bits (952), Expect = 4.7e-99 Identity = 179/183 (97.81%), Postives = 181/183 (98.91%), Query Frame = 0
BLAST of Tan0001060 vs. NCBI nr
Match: XP_022937092.1 (ADP-ribosylation factor-like protein 5 [Cucurbita moschata] >XP_022937100.1 ADP-ribosylation factor-like protein 5 [Cucurbita moschata] >XP_022937107.1 ADP-ribosylation factor-like protein 5 [Cucurbita moschata] >XP_022937116.1 ADP-ribosylation factor-like protein 5 [Cucurbita moschata] >XP_023538887.1 ADP-ribosylation factor-like protein 5 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 370.9 bits (951), Expect = 6.2e-99 Identity = 178/183 (97.27%), Postives = 182/183 (99.45%), Query Frame = 0
BLAST of Tan0001060 vs. NCBI nr
Match: XP_004134109.1 (ADP-ribosylation factor-like protein 5 [Cucumis sativus] >KGN56928.1 hypothetical protein Csa_010934 [Cucumis sativus]) HSP 1 Score: 370.9 bits (951), Expect = 6.2e-99 Identity = 179/183 (97.81%), Postives = 182/183 (99.45%), Query Frame = 0
BLAST of Tan0001060 vs. ExPASy TrEMBL
Match: A0A5A7U254 (ADP-ribosylation factor-like protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00910 PE=3 SV=1) HSP 1 Score: 374.0 bits (959), Expect = 3.5e-100 Identity = 180/183 (98.36%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Tan0001060 vs. ExPASy TrEMBL
Match: A0A1S3AWS5 (ADP-ribosylation factor-like protein 5 OS=Cucumis melo OX=3656 GN=LOC103483660 PE=3 SV=1) HSP 1 Score: 374.0 bits (959), Expect = 3.5e-100 Identity = 180/183 (98.36%), Postives = 183/183 (100.00%), Query Frame = 0
BLAST of Tan0001060 vs. ExPASy TrEMBL
Match: A0A6J1C994 (ADP-ribosylation factor-like protein 5 OS=Momordica charantia OX=3673 GN=LOC111009394 PE=3 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 2.3e-99 Identity = 179/183 (97.81%), Postives = 181/183 (98.91%), Query Frame = 0
BLAST of Tan0001060 vs. ExPASy TrEMBL
Match: A0A6J1FA74 (ADP-ribosylation factor-like protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111443495 PE=3 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 3.0e-99 Identity = 178/183 (97.27%), Postives = 182/183 (99.45%), Query Frame = 0
BLAST of Tan0001060 vs. ExPASy TrEMBL
Match: A0A0A0L5C3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G144180 PE=3 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 3.0e-99 Identity = 179/183 (97.81%), Postives = 182/183 (99.45%), Query Frame = 0
BLAST of Tan0001060 vs. TAIR 10
Match: AT3G22950.1 (ADP-ribosylation factor C1 ) HSP 1 Score: 348.2 bits (892), Expect = 4.0e-96 Identity = 165/183 (90.16%), Postives = 175/183 (95.63%), Query Frame = 0
BLAST of Tan0001060 vs. TAIR 10
Match: AT3G22950.2 (ADP-ribosylation factor C1 ) HSP 1 Score: 348.2 bits (892), Expect = 4.0e-96 Identity = 165/183 (90.16%), Postives = 175/183 (95.63%), Query Frame = 0
BLAST of Tan0001060 vs. TAIR 10
Match: AT1G70490.1 (Ras-related small GTP-binding family protein ) HSP 1 Score: 205.7 bits (522), Expect = 3.2e-53 Identity = 93/181 (51.38%), Postives = 130/181 (71.82%), Query Frame = 0
BLAST of Tan0001060 vs. TAIR 10
Match: AT1G23490.1 (ADP-ribosylation factor 1 ) HSP 1 Score: 205.7 bits (522), Expect = 3.2e-53 Identity = 93/181 (51.38%), Postives = 130/181 (71.82%), Query Frame = 0
BLAST of Tan0001060 vs. TAIR 10
Match: AT1G70490.3 (Ras-related small GTP-binding family protein ) HSP 1 Score: 205.7 bits (522), Expect = 3.2e-53 Identity = 93/181 (51.38%), Postives = 130/181 (71.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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