Tan0001058 (gene) Snake gourd v1

Overview


Name	Tan0001058
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Location	LG07: 12837297 .. 12838628 (-)
RNA-Seq Expression	Tan0001058
Synteny	Tan0001058

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCAAGAGGGACTAATCGAGGATTGGAGCAAGCTGAACTTGACTACAGAGGAGGAGGAAGTCTCAGTTGATGTAAGAATGGGAGCTGATCAGTCTACCAAATGTTATTTGAAGGATATATGGTCGAGAAGCTTCTTTCTCTAAGAGTTGTTTCGGCTGAGGTAATTCGGAAAACCTTTAAAGCAGCTTGGAAAATAGATAATGGGTTAGAAGTTGAAGTTATTGGGAAAAATCAATTCATCTTTAGGTTTCCAAGCGAAATAGATCGTATTCAAGTTGTATGTAATGGCCCCTGATTGTTTGATCGCTTCCTGCTCGTCTTAGAAAACCACAACCGTTTGTAAAACCCTCTGAGATGCAGTTTGATTTTGTAGCGTTTTGGGTCCATTTTCTTGATATCCCATTAACCTGCTTTAACAAAGAGATGGCAGAGAGGTTGGGGAATGCAATGGGTGTGTTTGAAGAGTTCGATGACAAAGAGGGAACTTTATGCCGGGGGGCGAGTATGAGAGTTAAAATCCGTATAAATATCAGGAAACCATTGAGAAGAGGAATTAAGTTGAACTTAGAGGGACCTATGGGAGAAGTTCTTATTCCAATTAAGTATGAAAAATTACCAGATTTTTGCTCTCATTGTGGCATCATAGGTCACCATTTTAAGGATTGCAATTTCTTCTACAAAAATGCCGACCCAAAATTGAATTTCCATCAATATGGTCAAGGTCTAAGGTATAATGGAAGATTCACGTCGGTTGCCCGATCCCCTACGAATAACTCCGACTTCCGCAGGAATGGAGACAAGGCAGAAACAAACTTAGGAAGGGAAAGGGTGAGCCCGACGGATGGCCCTCCATCTGGAATTCACAAGCAGAGGCAGAATATAGGAAGCAAGGAGAAGATCGTGTACCTGGTTCGAACGATCAGATGGATGTTGGCGAGTCGCCGACGACTGACCGTTTCCCATCCCCGATCAGCATTGATGGCATCATTAATTCATCTGCTAAGATTTCGGATTGCTCATTGATGGAGCAATCTCCAGAATTAATGTCGCCCGCCATCTCCGGAGGAATTGTAGCAGCAGAGAAACAAAAGAGAAACGGCTGTGCAAGGAAGCTAGATTTTGGGAATGAGGGAGGAAATGTTTTGGGGAGCAACTCTAACCCTGATTTTAAAAAAGCGAATGGGCCTGAGATGGTGGGCCTGGCGGTTGAGGAGGTTTCCATGAAAGGCAAGGGACTGGCAGATATGGGCCACACATTCAAATCCCTTGGCCCTCTGTCGGATAGTACACTGCCATCAACTGAGGAAAAGTCGAACCTAGCTGCATGA

mRNA sequence

ATGGACCAAGAGGGACTAATCGAGGATTGGAGCAAGCTGAACTTGACTACAGAGGAGGAGGAAGTCTCAGTTGATGAATGGAGACAAGGCAGAAACAAACTTAGGAAGGGAAAGGGTGAGCCCGACGGATGGCCCTCCATCTGGAATTCACAAGCAGAGGCAGAATATAGGAAGCAAGGAGAAGATCGTGTACCTGGTTCGAACGATCAGATGGATGTTGGCGAGTCGCCGACGACTGACCGTTTCCCATCCCCGATCAGCATTGATGGCATCATTAATTCATCTGCTAAGATTTCGGATTGCTCATTGATGGAGCAATCTCCAGAATTAATGTCGCCCGCCATCTCCGGAGGAATTGTAGCAGCAGAGAAACAAAAGAGAAACGGCTGTGCAAGGAAGCTAGATTTTGGGAATGAGGGAGGAAATGTTTTGGGGAGCAACTCTAACCCTGATTTTAAAAAAGCGAATGGGCCTGAGATGGTGGGCCTGGCGGTTGAGGAGGTTTCCATGAAAGGCAAGGGACTGGCAGATATGGGCCACACATTCAAATCCCTTGGCCCTCTGTCGGATAGTACACTGCCATCAACTGAGGAAAAGTCGAACCTAGCTGCATGA

Coding sequence (CDS)

ATGGACCAAGAGGGACTAATCGAGGATTGGAGCAAGCTGAACTTGACTACAGAGGAGGAGGAAGTCTCAGTTGATGAATGGAGACAAGGCAGAAACAAACTTAGGAAGGGAAAGGGTGAGCCCGACGGATGGCCCTCCATCTGGAATTCACAAGCAGAGGCAGAATATAGGAAGCAAGGAGAAGATCGTGTACCTGGTTCGAACGATCAGATGGATGTTGGCGAGTCGCCGACGACTGACCGTTTCCCATCCCCGATCAGCATTGATGGCATCATTAATTCATCTGCTAAGATTTCGGATTGCTCATTGATGGAGCAATCTCCAGAATTAATGTCGCCCGCCATCTCCGGAGGAATTGTAGCAGCAGAGAAACAAAAGAGAAACGGCTGTGCAAGGAAGCTAGATTTTGGGAATGAGGGAGGAAATGTTTTGGGGAGCAACTCTAACCCTGATTTTAAAAAAGCGAATGGGCCTGAGATGGTGGGCCTGGCGGTTGAGGAGGTTTCCATGAAAGGCAAGGGACTGGCAGATATGGGCCACACATTCAAATCCCTTGGCCCTCTGTCGGATAGTACACTGCCATCAACTGAGGAAAAGTCGAACCTAGCTGCATGA

Protein sequence

MDQEGLIEDWSKLNLTTEEEEVSVDEWRQGRNKLRKGKGEPDGWPSIWNSQAEAEYRKQGEDRVPGSNDQMDVGESPTTDRFPSPISIDGIINSSAKISDCSLMEQSPELMSPAISGGIVAAEKQKRNGCARKLDFGNEGGNVLGSNSNPDFKKANGPEMVGLAVEEVSMKGKGLADMGHTFKSLGPLSDSTLPSTEEKSNLAA

Homology

The following BLAST results are available for this feature:

BLAST of Tan0001058 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0001058 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0001058 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0001058 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0001058.1	Tan0001058.1	mRNA