Tan0000990 (gene) Snake gourd v1

Overview


Name	Tan0000990
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	DNA/RNA polymerases superfamily protein
Location	LG10: 41546053 .. 41549496 (+)
RNA-Seq Expression	Tan0000990
Synteny	Tan0000990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCACCACATACTAGCAGACGACGGAGGCAGGATCAGGGCGGGACGCAGGATCCTACCCAAGGGCAATCTGAGAGGGGATCTACTGCCCCGAGAGTCCAAACAGAGGCCAGAGATGAGCAACATGCCATTTCCTCACAGGAGGTAGGCAGGCCAGAGAGAGCAAAGCCAAGTGATCCAGAGAAGGCTTATGGAATAGAACGACTGAAGAAATTGGGAGCCACAGTGTTTGAGGGTTCCACAGATCCAGCTGACGCCGAGGTTTGGCTGAATAAGCTTGAGAAATTTTTTGACGTGATGAGCTGCCCTGAGGAGCGTGAAGTTAGCTACATTCCTGCTAGAGAAATAAGCAGAGGGATGGTGGAAATCAATACGAGCTAGGCGCAGTGATGCACATACTCTAGATTGGCAAACTTTCAGAGGCATATTTGAAGATAAATATTATCCTACCACATATCGTGAGGCGAAGAGAGATGAATTTTTAGAACTGAAGCAAGGATCACTTTCAGTGGCTGAGTATGAGAGAAGGTATACCGAGTTGTCGCGGTATGCTGATGTAATTGTGGCATCTGAGAGTGACAGGTGTCGAAGATTTGAAAGAGGGTTACGTCCTGAGATACGTACCCCAGTCACAGCCATTGCAAAGTGGACTGATTTCTCCCTACTGGTAGAGACTGCCCTACGTGTTGAGTAGAGTATAGCAGAGGCGCAGTCAGTAGTGGAGCCAACTCGAGGGCCTTCAACAACGAAAGCGATTTTGTGGTCGCGAACAGCGAAGATTCACACCCGGAGTGAATGTTTCAAGTCGTCAGGACTTTAAGAATCGAGCTGGCGGCCAGATATCGAGGCAGATAAATACTAGTGGTGCCTATCAGAGGCAGAGTCAAAGAGTACCTAGTCAGTCTGCCAGATCCACAGCAAGACCACAGACAATGCAGGAGTGATATGAACCAAGGCATCTCACGAAGTCGCATTAAATGAAGTCATTCATGGAAGTTTAACATAAGTTGCATTTAATGAACTCAAGTACAACTCATCATTTATTAAAGAACAACAAGCTTCATTTATGGGACAAGGACTTCAAGATACTTCAAGATGTGCTTTATTTACTATTGGAAGGTTACAAAGAGTTACAAAGCTAGCAAAGAGACATCATTCTCGGATTTATGGCAAATTTGATGTAAATTTCAGTTTTAAACTCTTGTTTTCAATGTTTTAGGTTACAAAATAGTTAGTGGACATTATGGTATTGATGAGGATGTAAGTTACAACTCTTAAACTACCATAGGTTATCTTTAGGTTTAATTTTGAAGGCTATAAATAGCCACATGTAATCCGAGGAAAAAGAAAAGGAAAAGATTGGAAAATGTAATCAAAAGGAGCCTTTGTGCTTTTTTATAGCCTTGAGCTATGTCTTTGCAATTCTATGTAGATTAGGTTGCATGCTTAGAATCATTCAAGCTTGACTTGATCAATCTTGCTTGTGGAGTGATTCGGATCTCATACAAGTTCTCTTGCCTTGAGATGTTTGATCGACAAGGTAATCCGGTTTTACTTTCCTTGAGTTTATTTTCAAAATTCGTTTTGGGGTCTTTGAGATTGAGTTATCTAAAGGTCTTGTTTCTTTAAGCAAGGTTGTTAGATCCAATTGTCAAGGGTTACTTAACATTTTGACATTAGAATCTTTGGCTTATTTGATTTCATTTTGATTTGAGATTTTTATGAACAAGATTGCCGGATTTTTCAATCCTTCTTAAAATTTCTCATCATTTATTAGATCACAAAACCCAAAAATCTCAAAATCGAAATGAAATCAAAGAAGCCAAAGATTCTAATATCAAAATGTTAAGTAACCCTTGAAAATTGGATCTAACAACCTTGCTTAAATAAACAAGACCTTTAGATAACTCAATTTCAAAGACCCCAAAACCAATTTTGAAAATCAACTCAAGGAAAAGTAAAATCGGATTACCTTGTCGATCAAACATCTCAAGGCAAGAGAACTTGTATGAGATCCGAATCACTCCACAAGCAAGATTGATCAAGTCAAGCTTGAATGATTCTAAGCATGCAACCTAATCTACATAGAATTGCAAAGACATATCTCAAGGCTATAAAAAGCACAAAGGCTCCTTTTGATTACATTTTTTTCTTTTCCTTTTTTTTCCTCCTCCTTGATTACATGTGGCTATTTATAGCCTTCAAAATTAAACCTAAAGATAACCTATGGTAGTTTAAGAGTTGTAACTTACATCCTCATCAATACCATAATGTCCACTAACTATTTTGTAACCTAAAACATTGAAAACAAGAGTTTAAAACTGAAATTTACATCAAATTTGTCATAAATCCGAGAATGATGTCTCTTTGCTAGCTTTGTAACTCTTTGTAACATTCCAATAGTAAATGAAGCACATCTTGAAGTATCTTGAAGTTCTTGTCCCATAAATGAAGCTTGTTGTTCTTTAATAAATGATGAGTTGTACTTGAGTTCATTAAATGCAACTTATGTTAAACTTCCATGAATGACTTCATTTAATGCGACTTCGTGAGATGCCTTGGTTCATATCAAGGAGTCTGTTGCCAGTGCAGCAAGGAGAACTCCATGTGCAAATTGTGGCAAGAATCATCGAGGCCAATGTCTTGTTGGTGTCGGTGTGTGTTACCAGTGTGGACAGCCAGGGCATTTTAAGAGTGATTGTCCACAGCTTATAGCAGCTGCACAGAGGGACCAGGGAGTTGGGTCCCAAACAGTTGAGCAGCCGAGAGTTCAAGTAGCTGCAGGAGAGGGCACCAGTGGTGCAAAACAGAAGGAAGTTGTAGGGAGACCTAGGCAACAGGAAAGGTCTACGCTATGACTCAAAGAGAAGCGAGAGGATGCACCGGCGTTATTATTACGGTACGATTTCTATTTGTAATGTACCCGCACGTGTTTGATAGATCCAGATCCAAAGCTACGCATTCCTTTGTTTCAGATATATTTCTAACTAGGCCAATAAAAAGTTAGAGCCTTTATTTGAGAGCTTAGTTATATACACACGATTGGTGATGCTTTACTGGTCGATGCAGTGTTGCGAGATTGTGAGGTCTTAGTAGAAGGTCTCAATTTGTTAGTGGATCTTCTTCCACTAGAGTTGCAGGTGTTAGATGCAATTTTAGGGATGGATTTCTTATTCACTCATTATGCTTCCATGGATTGCCGTAGAAAGGAAGTTGTGTTCAGAAACCGAGATTGGTGAAATGGTTTTCAGGGGTGAAAGGAAGATTATTCCTACGAGTTTTATTTCAGCATTAAAAGCGGAGAAGTTATTGAGGAAAGGTTGCACGGCGTTTCTTGCACATGTAGTAGAGGTGCAGGAGGAAAAGCTAAAACCAAAAAATGTTCTTGTTGTGAACGAGTTTCTTGATGTTTTTCCAGCAGATCCGTCGAGTTGTTGCCACTGA

mRNA sequence

ATGCCACCACATACTAGCAGACGACGGAGGCAGGATCAGGGCGGGACGCAGGATCCTACCCAAGGGCAATCTGAGAGGGGATCTACTGCCCCGAGAGTCCAAACAGAGGCCAGAGATGAGCAACATGCCATTTCCTCACAGGAGGTAGGCAGGCCAGAGAGAGCAAAGCCAACTAGGCGCAGTGATGCACATACTCTAGATTGGCAAACTTTCAGAGGCATATTTGAAGATAAATATTATCCTACCACATATCGTGAGGCGAAGAGAGATGAATTTTTAGAACTGAAGCAAGGATCACTTTCAGTGGCTGAGTATGAGAGAAGGTATACCGAGTTGTCGCGGTATGCTGATGTAATTGTGGCATCTGAGAGTGACAGGTGTCGAAGATTTGAAAGAGGGTTACGTCCTGAGATACGTACCCCAGTCACAGCCATTGCAAAGTGGACTGATTTCTCCCTACTGGTAGAGACTGCCCTACGTGTTGATCGTCAGGACTTTAAGAATCGAGCTGGCGGCCAGATATCGAGGCAGATAAATACTAGTGGTGCCTATCAGAGGCAGAGTCAAAGAGTACCTAGTCAGTCTGCCAGATCCACAGCAAGACCACAGACAATGCAGGATTATATACACACGATTGGTGATGCTTTACTGGTCGATGCAGTGTTGCGAGATTGTGAGGTCTTAGTAGAAGGTCTCAATTTGTTAGTGGATCTTCTTCCACTAGAGTTGCAGGTGTTAGATGCAATTTTAGGGATGGATTTCTTATTCACTCATTATGCTTCCATGGATTGCCGTAGAAAGGAAGTTGTGTTCAGAAACCGAGATTGTTTTATTTCAGCATTAAAAGCGGAGAAGTTATTGAGGAAAGGTTGCACGGCGTTTCTTGCACATGTAGTAGAGGTGCAGGAGGAAAAGCTAAAACCAAAAAATGTTCTTGTTGTGAACGAGTTTCTTGATGTTTTTCCAGCAGATCCGTCGAGTTGTTGCCACTGA

Coding sequence (CDS)

ATGCCACCACATACTAGCAGACGACGGAGGCAGGATCAGGGCGGGACGCAGGATCCTACCCAAGGGCAATCTGAGAGGGGATCTACTGCCCCGAGAGTCCAAACAGAGGCCAGAGATGAGCAACATGCCATTTCCTCACAGGAGGTAGGCAGGCCAGAGAGAGCAAAGCCAACTAGGCGCAGTGATGCACATACTCTAGATTGGCAAACTTTCAGAGGCATATTTGAAGATAAATATTATCCTACCACATATCGTGAGGCGAAGAGAGATGAATTTTTAGAACTGAAGCAAGGATCACTTTCAGTGGCTGAGTATGAGAGAAGGTATACCGAGTTGTCGCGGTATGCTGATGTAATTGTGGCATCTGAGAGTGACAGGTGTCGAAGATTTGAAAGAGGGTTACGTCCTGAGATACGTACCCCAGTCACAGCCATTGCAAAGTGGACTGATTTCTCCCTACTGGTAGAGACTGCCCTACGTGTTGATCGTCAGGACTTTAAGAATCGAGCTGGCGGCCAGATATCGAGGCAGATAAATACTAGTGGTGCCTATCAGAGGCAGAGTCAAAGAGTACCTAGTCAGTCTGCCAGATCCACAGCAAGACCACAGACAATGCAGGATTATATACACACGATTGGTGATGCTTTACTGGTCGATGCAGTGTTGCGAGATTGTGAGGTCTTAGTAGAAGGTCTCAATTTGTTAGTGGATCTTCTTCCACTAGAGTTGCAGGTGTTAGATGCAATTTTAGGGATGGATTTCTTATTCACTCATTATGCTTCCATGGATTGCCGTAGAAAGGAAGTTGTGTTCAGAAACCGAGATTGTTTTATTTCAGCATTAAAAGCGGAGAAGTTATTGAGGAAAGGTTGCACGGCGTTTCTTGCACATGTAGTAGAGGTGCAGGAGGAAAAGCTAAAACCAAAAAATGTTCTTGTTGTGAACGAGTTTCTTGATGTTTTTCCAGCAGATCCGTCGAGTTGTTGCCACTGA

Protein sequence

MPPHTSRRRRQDQGGTQDPTQGQSERGSTAPRVQTEARDEQHAISSQEVGRPERAKPTRRSDAHTLDWQTFRGIFEDKYYPTTYREAKRDEFLELKQGSLSVAEYERRYTELSRYADVIVASESDRCRRFERGLRPEIRTPVTAIAKWTDFSLLVETALRVDRQDFKNRAGGQISRQINTSGAYQRQSQRVPSQSARSTARPQTMQDYIHTIGDALLVDAVLRDCEVLVEGLNLLVDLLPLELQVLDAILGMDFLFTHYASMDCRRKEVVFRNRDCFISALKAEKLLRKGCTAFLAHVVEVQEEKLKPKNVLVVNEFLDVFPADPSSCCH

Homology

[Close]

BLAST of Tan0000990 vs. NCBI nr
Match: KAA0051980.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK04577.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 356.3 bits (913), Expect = 2.8e-94
Identity = 236/509 (46.37%), Postives = 268/509 (52.65%), Query Frame = 0


Query: 1   MPPHTSRRRRQDQGGTQDPTQGQSERGSTAPRVQTEARDEQHAISSQEVGRPERAKPTR- 60
           MPP TSRRRRQ+Q   QDPTQGQSERGS+ PR Q EA  E+   S+QE+GR ERA+P+  
Sbjct: 151 MPPRTSRRRRQNQDRMQDPTQGQSERGSSTPRGQNEAGSERFVRSAQEIGRSERARPSDP 210

Query: 61  -----------------------------RSDAHTLDWQTFRGIFEDKYYPTTYREAKRD 120
                                         +DA TLDWQTFRGIFE+KYYPTT  EAKRD
Sbjct: 211 EKMYGIERLKELGATVFVGSTDLADAEVWHNDARTLDWQTFRGIFEEKYYPTTCCEAKRD 270

Query: 121 EFLELKQGSLSVAEYERRYTELSRYADVIVASESDRCRRFERGLRPEIRTPVTAIAKWTD 180
           EFLELKQGSLSVA+Y+R+YTELS YA+VI+ASESDRCRRFERGL  EIRTPVTAIAKWTD
Sbjct: 271 EFLELKQGSLSVAKYKRKYTELSWYAEVIMASESDRCRRFERGLHFEIRTPVTAIAKWTD 330

Query: 181 FSLLVETALRVDR--------------------------------------QDFKNRAGG 240
           FS L+ETALRV++                                      QDFK R GG
Sbjct: 331 FSQLIETALRVEQSIVEEKSAMELSRGVSTTSRIRGREQRRSTPGVNISGCQDFKRRLGG 390

Query: 241 QISRQINTSGAYQRQSQRVPSQSARSTARPQTMQDYI----------------------- 300
           +  RQ+++  AYQRQSQR  SQ   S ARP+T Q+ +                       
Sbjct: 391 KPLRQMSSGSAYQRQSQRASSQFTNSVARPRTGQESVASESRRTPCVSCSKSHRGQCLVG 450

Query: 301 --------------------------------HT-------------------------- 325
                                           HT                          
Sbjct: 451 AGVCYQCGQTGHFKRDCPQLRVGVQRDQGVESHTVEQPRILAAAREGTSGARQKRVVGRP 510

[Close]

BLAST of Tan0000990 vs. NCBI nr
Match: KAA0035138.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 344.7 bits (883), Expect = 8.6e-91
Identity = 238/535 (44.49%), Postives = 267/535 (49.91%), Query Frame = 0


Query: 1   MPPHTSRRRRQDQGGTQDPTQGQSERGSTAPRVQTEARDEQHAISSQEVGRPERAKP--- 60
           M P T RRRRQ+Q G Q PTQG S   S+   V+  A +EQ   ++QE+GRP+RA+P   
Sbjct: 39  MSPRTGRRRRQNQDGMQGPTQGPSLGESSTLGVRGGAGNEQFTRTTQEIGRPDRAEPSNP 98

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 99  KKAYGIERLKKLGATVFEGSTDPVDAENWLNMLEKCFDVMNCPEEQKVRLATFLLQKEAE 158

Query: 121 -------TRRSDAHTLDWQTFRGIFEDKYYPTTYREAKRDEFLELKQGSLSVAEYERRYT 180
                  TRRSDA  LDWQTFR IFEDKYYP+TY EAKRDEFL LKQGSLSVAEYE++YT
Sbjct: 159 GWWKSILTRRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYEKKYT 218

Query: 181 ELSRYADVIVASESDRCRRFERGLRPEIRTPVTAIAKWTDFSLLVETALRVD-------- 240
           ELSRYADVIVASESDRCRRFERGLR EIRTPVTAIAKWT+FS LVETALRV+        
Sbjct: 219 ELSRYADVIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 278

Query: 241 ------------------------------RQDFKNRAGGQISRQINTSGAYQRQSQRVP 300
                                         RQDFKNR+GGQ SR ++    +QRQSQR+P
Sbjct: 279 AVELSRGTSTTNGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 338

Query: 301 SQSARSTARPQTMQDYIHT----------------------------------------- 327
           SQ  RST R Q  Q+ I +                                         
Sbjct: 339 SQPIRSTVRSQPGQESIASTVRRTPCTSCGKNHRVQRDQGVRSQTVEKSRVSVVPIEGTS 398

[Close]

BLAST of Tan0000990 vs. NCBI nr
Match: KAA0056288.1 (uncharacterized protein E6C27_scaffold226G00600 [Cucumis melo var. makuwa] >TYK05213.1 uncharacterized protein E5676_scaffold108G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 344.7 bits (883), Expect = 8.6e-91
Identity = 229/498 (45.98%), Postives = 260/498 (52.21%), Query Frame = 0


Query: 1   MPPHTSRRRRQDQGGTQDPTQGQSERGSTAPRVQTEARDEQHAISSQEVGR--------- 60
           MPP T RRRRQ+Q G Q PTQG S   S   RV+    +EQ A +++E+GR         
Sbjct: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESNTLRVRGGVGNEQFARTAEEIGRPIEQSLCFD 60

Query: 61  ----PERAKP-------------------TRRSDAHTLDWQTFRGIFEDKYYPTTYREAK 120
               PE  K                     RRSDA  L+WQTFRGIFEDKYYP TY EAK
Sbjct: 61  VMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARALNWQTFRGIFEDKYYPNTYCEAK 120

Query: 121 RDEFLELKQGSLSVAEYERRYTELSRYADVIVASESDRCRRFERGLRPEIRTPVTAIAKW 180
           RDEFL LKQGSLSVAEYER+YTELSRYADVIVASESDRCRRFERGLR EIRTPVTAIAKW
Sbjct: 121 RDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRFERGLRFEIRTPVTAIAKW 180

Query: 181 TDFSLLVETALRVD--------------------------------------RQDFKNRA 240
           T+FS LVETAL V+                                      RQDFKNR+
Sbjct: 181 TNFSQLVETALHVEQSITEEKSAVEFSRGTSTASGFRGREQRRFTPGINISSRQDFKNRS 240

Query: 241 GGQISRQINTSGAYQRQSQRVPSQSARSTARPQTMQDYIHT------------------- 300
            GQ SR ++    +Q+QSQR+P+Q  RST R Q  Q+ + +                   
Sbjct: 241 RGQASRNVSYGSVFQKQSQRIPTQPTRSTVRSQPGQESVASTVRRTSCTSCGKNHRDQGV 300

Query: 301 ------------------------------------------------------------ 327
                                                                       
Sbjct: 301 RSQTVEQSRVSVVPTEGTSGARKKGVVGRLRQQGKVYAMTQQEAEDAPDVITGTILICNV 360

[Close]

BLAST of Tan0000990 vs. NCBI nr
Match: TYK08952.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 339.3 bits (869), Expect = 3.6e-89
Identity = 227/499 (45.49%), Postives = 257/499 (51.50%), Query Frame = 0


Query: 11  QDQGGTQDPTQGQSERGSTAPRVQTEARDEQHAISSQEVGRPERAKPTR----------- 70
           Q+Q GTQDPTQGQSERGS+ PR Q E  +E+ A SSQE+GRPERA+P+            
Sbjct: 67  QNQDGTQDPTQGQSERGSSTPRGQNEVGNERFARSSQEIGRPERARPSNPEKMCGIERLK 126

Query: 71  -------RSDAHTLDWQTFRGIFEDKYYPTTYREAKRDEFLELKQGSLSVAEYERRYTEL 130
                         D + FRGIFE+KYYPTTY EAKRDEFLELKQGSL V EYE +YTEL
Sbjct: 127 KLGATVFEGSTDPADVEMFRGIFEEKYYPTTYCEAKRDEFLELKQGSLLVVEYEMKYTEL 186

Query: 131 SRYADVIVASESDRCRRFERGLRPEIRTPVTAIAKWTDFSLLVETALRVDR--------- 190
           SRYA++IVASESDRCRRFERGLR E+RTPVTAIAKWT+FS LVETALRV++         
Sbjct: 187 SRYAEMIVASESDRCRRFERGLRFELRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSAM 246

Query: 191 -----------------------------QDFKNRAGGQISRQINTSGAYQRQSQRVPSQ 250
                                        QDFK R+GG+  RQ+++  AYQRQSQR  SQ
Sbjct: 247 ELSRGVSTTSGIRGREQRRFTPGVNVSGCQDFKRRSGGKPLRQMSSGTAYQRQSQRASSQ 306

Query: 251 SARSTARPQT-------------------------------------------------- 310
           SA S AR +T                                                  
Sbjct: 307 SANSVARSRTRHFKRDCPQLRVAVRRDQGVESHTVEQPRISIAAGEGTSGARQKEVVGRP 366

Query: 311 -MQDYIHT---------------------------------------------------- 327
             Q  ++                                                     
Sbjct: 367 RQQGKVYAMTQQEAEDALDVITGTILICNVPARVLLDSGATHSFVSSMFLTKLNRMLEPL 426

[Close]

BLAST of Tan0000990 vs. NCBI nr
Match: KAA0055470.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 339.3 bits (869), Expect = 3.6e-89
Identity = 227/499 (45.49%), Postives = 257/499 (51.50%), Query Frame = 0


Query: 11  QDQGGTQDPTQGQSERGSTAPRVQTEARDEQHAISSQEVGRPERAKPTR----------- 70
           Q+Q GTQDPTQGQSERGS+ PR Q E  +E+ A SSQE+GRPERA+P+            
Sbjct: 67  QNQDGTQDPTQGQSERGSSTPRGQNEVGNERFARSSQEIGRPERARPSNPEKMCGIERLK 126

Query: 71  -------RSDAHTLDWQTFRGIFEDKYYPTTYREAKRDEFLELKQGSLSVAEYERRYTEL 130
                         D + FRGIFE+KYYPTTY EAKRDEFLELKQGSL V EYE +YTEL
Sbjct: 127 KLGATVFEGSTDPADVEMFRGIFEEKYYPTTYCEAKRDEFLELKQGSLLVVEYEMKYTEL 186

Query: 131 SRYADVIVASESDRCRRFERGLRPEIRTPVTAIAKWTDFSLLVETALRVDR--------- 190
           SRYA++IVASESDRCRRFERGLR E+RTPVTAIAKWT+FS LVETALRV++         
Sbjct: 187 SRYAEMIVASESDRCRRFERGLRFELRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSAM 246

Query: 191 -----------------------------QDFKNRAGGQISRQINTSGAYQRQSQRVPSQ 250
                                        QDFK R+GG+  RQ+++  AYQRQSQR  SQ
Sbjct: 247 ELSRGVSTTSGIRGREQRRFTPGVNVSGCQDFKRRSGGKPLRQMSSGTAYQRQSQRASSQ 306

Query: 251 SARSTARPQT-------------------------------------------------- 310
           SA S AR +T                                                  
Sbjct: 307 SANSVARSRTRHFKRDCPQLRVAVRRDQGVESHTVEQPRISIAAGEGTSGARQKEVVGRP 366

Query: 311 -MQDYIHT---------------------------------------------------- 327
             Q  ++                                                     
Sbjct: 367 RQQGKVYAMTQQEAEDALDVITGTILICNVPARVLLDSGATHSFVSSMFLTKLNRMLEPL 426

[Close]

BLAST of Tan0000990 vs. ExPASy TrEMBL
Match: A0A5A7U9X4 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G002130 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 1.4e-94
Identity = 236/509 (46.37%), Postives = 268/509 (52.65%), Query Frame = 0


Query: 1   MPPHTSRRRRQDQGGTQDPTQGQSERGSTAPRVQTEARDEQHAISSQEVGRPERAKPTR- 60
           MPP TSRRRRQ+Q   QDPTQGQSERGS+ PR Q EA  E+   S+QE+GR ERA+P+  
Sbjct: 151 MPPRTSRRRRQNQDRMQDPTQGQSERGSSTPRGQNEAGSERFVRSAQEIGRSERARPSDP 210

Query: 61  -----------------------------RSDAHTLDWQTFRGIFEDKYYPTTYREAKRD 120
                                         +DA TLDWQTFRGIFE+KYYPTT  EAKRD
Sbjct: 211 EKMYGIERLKELGATVFVGSTDLADAEVWHNDARTLDWQTFRGIFEEKYYPTTCCEAKRD 270

Query: 121 EFLELKQGSLSVAEYERRYTELSRYADVIVASESDRCRRFERGLRPEIRTPVTAIAKWTD 180
           EFLELKQGSLSVA+Y+R+YTELS YA+VI+ASESDRCRRFERGL  EIRTPVTAIAKWTD
Sbjct: 271 EFLELKQGSLSVAKYKRKYTELSWYAEVIMASESDRCRRFERGLHFEIRTPVTAIAKWTD 330

Query: 181 FSLLVETALRVDR--------------------------------------QDFKNRAGG 240
           FS L+ETALRV++                                      QDFK R GG
Sbjct: 331 FSQLIETALRVEQSIVEEKSAMELSRGVSTTSRIRGREQRRSTPGVNISGCQDFKRRLGG 390

Query: 241 QISRQINTSGAYQRQSQRVPSQSARSTARPQTMQDYI----------------------- 300
           +  RQ+++  AYQRQSQR  SQ   S ARP+T Q+ +                       
Sbjct: 391 KPLRQMSSGSAYQRQSQRASSQFTNSVARPRTGQESVASESRRTPCVSCSKSHRGQCLVG 450

Query: 301 --------------------------------HT-------------------------- 325
                                           HT                          
Sbjct: 451 AGVCYQCGQTGHFKRDCPQLRVGVQRDQGVESHTVEQPRILAAAREGTSGARQKRVVGRP 510

[Close]

BLAST of Tan0000990 vs. ExPASy TrEMBL
Match: A0A5D3BZQ5 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00180 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 4.2e-91
Identity = 229/498 (45.98%), Postives = 260/498 (52.21%), Query Frame = 0


Query: 1   MPPHTSRRRRQDQGGTQDPTQGQSERGSTAPRVQTEARDEQHAISSQEVGR--------- 60
           MPP T RRRRQ+Q G Q PTQG S   S   RV+    +EQ A +++E+GR         
Sbjct: 1   MPPRTGRRRRQNQDGMQGPTQGPSVGESNTLRVRGGVGNEQFARTAEEIGRPIEQSLCFD 60

Query: 61  ----PERAKP-------------------TRRSDAHTLDWQTFRGIFEDKYYPTTYREAK 120
               PE  K                     RRSDA  L+WQTFRGIFEDKYYP TY EAK
Sbjct: 61  VMNCPEERKVRLATFLLQKEAEGWWKSILARRSDARALNWQTFRGIFEDKYYPNTYCEAK 120

Query: 121 RDEFLELKQGSLSVAEYERRYTELSRYADVIVASESDRCRRFERGLRPEIRTPVTAIAKW 180
           RDEFL LKQGSLSVAEYER+YTELSRYADVIVASESDRCRRFERGLR EIRTPVTAIAKW
Sbjct: 121 RDEFLGLKQGSLSVAEYERKYTELSRYADVIVASESDRCRRFERGLRFEIRTPVTAIAKW 180

Query: 181 TDFSLLVETALRVD--------------------------------------RQDFKNRA 240
           T+FS LVETAL V+                                      RQDFKNR+
Sbjct: 181 TNFSQLVETALHVEQSITEEKSAVEFSRGTSTASGFRGREQRRFTPGINISSRQDFKNRS 240

Query: 241 GGQISRQINTSGAYQRQSQRVPSQSARSTARPQTMQDYIHT------------------- 300
            GQ SR ++    +Q+QSQR+P+Q  RST R Q  Q+ + +                   
Sbjct: 241 RGQASRNVSYGSVFQKQSQRIPTQPTRSTVRSQPGQESVASTVRRTSCTSCGKNHRDQGV 300

Query: 301 ------------------------------------------------------------ 327
                                                                       
Sbjct: 301 RSQTVEQSRVSVVPTEGTSGARKKGVVGRLRQQGKVYAMTQQEAEDAPDVITGTILICNV 360

[Close]

BLAST of Tan0000990 vs. ExPASy TrEMBL
Match: A0A5A7SX06 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002230 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 4.2e-91
Identity = 238/535 (44.49%), Postives = 267/535 (49.91%), Query Frame = 0


Query: 1   MPPHTSRRRRQDQGGTQDPTQGQSERGSTAPRVQTEARDEQHAISSQEVGRPERAKP--- 60
           M P T RRRRQ+Q G Q PTQG S   S+   V+  A +EQ   ++QE+GRP+RA+P   
Sbjct: 39  MSPRTGRRRRQNQDGMQGPTQGPSLGESSTLGVRGGAGNEQFTRTTQEIGRPDRAEPSNP 98

Query: 61  ------------------------------------------------------------ 120
                                                                       
Sbjct: 99  KKAYGIERLKKLGATVFEGSTDPVDAENWLNMLEKCFDVMNCPEEQKVRLATFLLQKEAE 158

Query: 121 -------TRRSDAHTLDWQTFRGIFEDKYYPTTYREAKRDEFLELKQGSLSVAEYERRYT 180
                  TRRSDA  LDWQTFR IFEDKYYP+TY EAKRDEFL LKQGSLSVAEYE++YT
Sbjct: 159 GWWKSILTRRSDARALDWQTFRVIFEDKYYPSTYCEAKRDEFLGLKQGSLSVAEYEKKYT 218

Query: 181 ELSRYADVIVASESDRCRRFERGLRPEIRTPVTAIAKWTDFSLLVETALRVD-------- 240
           ELSRYADVIVASESDRCRRFERGLR EIRTPVTAIAKWT+FS LVETALRV+        
Sbjct: 219 ELSRYADVIVASESDRCRRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQSITEEKS 278

Query: 241 ------------------------------RQDFKNRAGGQISRQINTSGAYQRQSQRVP 300
                                         RQDFKNR+GGQ SR ++    +QRQSQR+P
Sbjct: 279 AVELSRGTSTTNGFRGREQRRFTPGINISSRQDFKNRSGGQASRNVSYGSVFQRQSQRIP 338

Query: 301 SQSARSTARPQTMQDYIHT----------------------------------------- 327
           SQ  RST R Q  Q+ I +                                         
Sbjct: 339 SQPIRSTVRSQPGQESIASTVRRTPCTSCGKNHRVQRDQGVRSQTVEKSRVSVVPIEGTS 398

[Close]

BLAST of Tan0000990 vs. ExPASy TrEMBL
Match: A0A5A7UJV1 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold221G00430 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.7e-89
Identity = 227/499 (45.49%), Postives = 257/499 (51.50%), Query Frame = 0


Query: 11  QDQGGTQDPTQGQSERGSTAPRVQTEARDEQHAISSQEVGRPERAKPTR----------- 70
           Q+Q GTQDPTQGQSERGS+ PR Q E  +E+ A SSQE+GRPERA+P+            
Sbjct: 67  QNQDGTQDPTQGQSERGSSTPRGQNEVGNERFARSSQEIGRPERARPSNPEKMCGIERLK 126

Query: 71  -------RSDAHTLDWQTFRGIFEDKYYPTTYREAKRDEFLELKQGSLSVAEYERRYTEL 130
                         D + FRGIFE+KYYPTTY EAKRDEFLELKQGSL V EYE +YTEL
Sbjct: 127 KLGATVFEGSTDPADVEMFRGIFEEKYYPTTYCEAKRDEFLELKQGSLLVVEYEMKYTEL 186

Query: 131 SRYADVIVASESDRCRRFERGLRPEIRTPVTAIAKWTDFSLLVETALRVDR--------- 190
           SRYA++IVASESDRCRRFERGLR E+RTPVTAIAKWT+FS LVETALRV++         
Sbjct: 187 SRYAEMIVASESDRCRRFERGLRFELRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSAM 246

Query: 191 -----------------------------QDFKNRAGGQISRQINTSGAYQRQSQRVPSQ 250
                                        QDFK R+GG+  RQ+++  AYQRQSQR  SQ
Sbjct: 247 ELSRGVSTTSGIRGREQRRFTPGVNVSGCQDFKRRSGGKPLRQMSSGTAYQRQSQRASSQ 306

Query: 251 SARSTARPQT-------------------------------------------------- 310
           SA S AR +T                                                  
Sbjct: 307 SANSVARSRTRHFKRDCPQLRVAVRRDQGVESHTVEQPRISIAAGEGTSGARQKEVVGRP 366

Query: 311 -MQDYIHT---------------------------------------------------- 327
             Q  ++                                                     
Sbjct: 367 RQQGKVYAMTQQEAEDALDVITGTILICNVPARVLLDSGATHSFVSSMFLTKLNRMLEPL 426

[Close]

BLAST of Tan0000990 vs. ExPASy TrEMBL
Match: A0A5D3CCC7 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00430 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.7e-89
Identity = 227/499 (45.49%), Postives = 257/499 (51.50%), Query Frame = 0


Query: 11  QDQGGTQDPTQGQSERGSTAPRVQTEARDEQHAISSQEVGRPERAKPTR----------- 70
           Q+Q GTQDPTQGQSERGS+ PR Q E  +E+ A SSQE+GRPERA+P+            
Sbjct: 67  QNQDGTQDPTQGQSERGSSTPRGQNEVGNERFARSSQEIGRPERARPSNPEKMCGIERLK 126

Query: 71  -------RSDAHTLDWQTFRGIFEDKYYPTTYREAKRDEFLELKQGSLSVAEYERRYTEL 130
                         D + FRGIFE+KYYPTTY EAKRDEFLELKQGSL V EYE +YTEL
Sbjct: 127 KLGATVFEGSTDPADVEMFRGIFEEKYYPTTYCEAKRDEFLELKQGSLLVVEYEMKYTEL 186

Query: 131 SRYADVIVASESDRCRRFERGLRPEIRTPVTAIAKWTDFSLLVETALRVDR--------- 190
           SRYA++IVASESDRCRRFERGLR E+RTPVTAIAKWT+FS LVETALRV++         
Sbjct: 187 SRYAEMIVASESDRCRRFERGLRFELRTPVTAIAKWTNFSQLVETALRVEQSIVEEKSAM 246

Query: 191 -----------------------------QDFKNRAGGQISRQINTSGAYQRQSQRVPSQ 250
                                        QDFK R+GG+  RQ+++  AYQRQSQR  SQ
Sbjct: 247 ELSRGVSTTSGIRGREQRRFTPGVNVSGCQDFKRRSGGKPLRQMSSGTAYQRQSQRASSQ 306

Query: 251 SARSTARPQT-------------------------------------------------- 310
           SA S AR +T                                                  
Sbjct: 307 SANSVARSRTRHFKRDCPQLRVAVRRDQGVESHTVEQPRISIAAGEGTSGARQKEVVGRP 366

Query: 311 -MQDYIHT---------------------------------------------------- 327
             Q  ++                                                     
Sbjct: 367 RQQGKVYAMTQQEAEDALDVITGTILICNVPARVLLDSGATHSFVSSMFLTKLNRMLEPL 426

The following BLAST results are available for this feature:

BLAST of Tan0000990 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0000990 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051980.1	2.8e-94	46.37	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK04577.1 D...	[more]
KAA0035138.1	8.6e-91	44.49	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0056288.1	8.6e-91	45.98	uncharacterized protein E6C27_scaffold226G00600 [Cucumis melo var. makuwa] >TYK0...	[more]
TYK08952.1	3.6e-89	45.49	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0055470.1	3.6e-89	45.49	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]

BLAST of Tan0000990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U9X4	1.4e-94	46.37	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3BZQ5	4.2e-91	45.98	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5A7SX06	4.2e-91	44.49	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7UJV1	1.7e-89	45.49	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3CCC7	1.7e-89	45.49	DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of Tan0000990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 65..136 e-value: 6.2E-11 score: 42.4
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 188..286 e-value: 4.7E-7 score: 31.6
None	No IPR available	PFAM	PF08284	RVP_2	coord: 209..274 e-value: 2.1E-10 score: 40.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..63
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 62..196
None	No IPR available	PANTHER	PTHR34482:SF4	POLYMERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 62..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0000990.1	Tan0000990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity