Tan0000947 (gene) Snake gourd v1

Overview


Name	Tan0000947
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Ribosomal protein L2 family
Location	LG07: 15128793 .. 15137753 (-)
RNA-Seq Expression	Tan0000947
Synteny	Tan0000947

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAATTTCACATCTGTTTTGAGGTAATATTCTCTAAAATTTATTTCCCTTTCATTTCTCCATTCCAATTTGTATGATGGGTTTTTTTTTTCTTCTTCCTCGATTTTCGCCTTTTGCTTTCGTATAATCTCTACTCGTTGCAACCTTAGATTCTTTTTCTTTACAGTTCATGGCTACAATTTCAATTACCTCACATTTTGATTTTGCTTTATGAAGAAACCCAGAAAGGTCATGGCTATGAAATCCGCGGCCTCTGTGGCTCTTCGGGGCCTCAGGAGGTTCTCCTCCAAAAGTTCAATTTCAGCTTCTTCTCGGGCTTCGGTCAATCAGGACCCCACCTCCGACCTCTTAGTTTCTGGTAAGTCTCTCTTCTCCTTTATGTGACCTTCATTTCGATGACATTCTTTGTATTTTCTTCTTCCTTATCTCATTCCTTTTGATTTTGAGTTCAAAGATTTCCTTGTGGTTGGAATGTTTGTCTGTTGTGTCTGGCTATTGTGGAACGTATTTTGATTTAATTGCTTCTTTTTTGTTCTCTGGAACGCAGAAAGCAAATGTGCACTTTTGGTTTTGTTACTTTCTTCATTTGTTATTTCCTAAATGCCGAATCCGTGGTGTAACGCAAAATGTTTCTGTGTTTACATGTTCTTTTTCTTCTTTACGCATTTGTAATTTTCCTAGTCATATCTGTTTTCAAAGGGGTTCCTTGATTGATTGATTGTTTGTTTGTTTGTTTGGTTCTCGTCAATTAATGGTTTCATCTTGAAAGAATTGACATATTCTTGAGTTAAACATCAATGGAATTTTTTTTTTGAAAAGAAGCTAAGCTTTCATGGAGAAATATGAAAGAATATACCATACAGAAAACAATCCCATCAAAATAAGTCTCAATACTAATTACCTTACCAGAAAGGACCTCAATCTAAAAAATTAGATCAAGCTGGTAATTACAAAAAGTCCGATTAACGGATGCCCATCATAAAGAATTAAACCTAACCAAAATGGAAATTGAACACTTTTGTTTTGTTGTTTGGATTCAGTTGTTTTTTCCATTGGAAGAAAATGGTAAGCTTTTGGTTATACTAGGAAGGGGCTTTTACAATTTTCATGTGTTGGGGAAATCTCAATTGTACGTGGTAACTTGGCTATAAAAAGAAAAAAAAATTACTATAATTTGGAGCCTTTTTTGTTTAACTTTTTTTTTTGTGTGTGTGTGACTGTGTGTGTGTGTTTTAAAGGAAACATAAAATGTTCACTTAAAAAATGAAAATTTTAAAAGAAAGTTGTACAGGCTCCCCAAAAGGAGCTACTTATAAACCAATCTACACCCTGAAACTTACTAGAAAAATTCAAAACTCATCCTGGACCCCTATTGAGATCAATACAAACTAAAAAAGAATGACCCCGACAACTTACAAAACATCACATGAAGCTCAATGATCATACCCTTGGCACACTGAAAAAGACAACCTTCCTAAAGCTAATCTACAATATCTCTCTCCTGCACCAATGAATAATAACAAACTTCAATGTCCACAGCAACATCTTCTAACCGAACAGCAGCAAAGATTGTGACATGGCCACATCCTCGCCATCCCAAACAATAGTAAAAGCTACTAGACAAGGATAACCGTGATTTTGAAGCCAAACAGCATCATCTTCTAGCTGAACCTACTATAACTAAAGCACAGCCAAAACCTTTCTATACTTGCTTTCTTTCTTTCCCTTTTTTTTTATGAAACGAGACTCATAATCAAAGAACTACAAAAGAACTTCAAAGAACTACAAAAGAAGGGCCTTCCAATAGTTGATCTCAATAATAAGCATTGTTCTTGTTCCATGCTTGAGGAGGTACCGATGCACCCCCTTTGGATAAGGCAGGGTCATTTGGCAAGCTTGTTGCTTTGTTGTTGTTTGGGGTGTTTGGCTTTGAGAGAAATGGTAAAATCTCTGAACGGCTTGAGGGTCTTGGTTTGAGGTGTGAGATAGTGTTAGTTTTAATGGTTTCTTTACTTGTGAGTTTGGTCTAATTCTTTTAGATTGGAGCCTCTTTCTTTGAGTGGACTCCTTTTGTTGGGCCATTGTTTTTGTATTGTCCTTGTATATTCTTTCATATTTTTCAATTAAAGTGTCGTTTCTAATTAAAAAAACAAAAATAGTTAATAATAAGCACACCTTCTCGTGAATAATAACTTTTCTACACTTGCTCATTTTGGTTCTTTTTGTAATAGTGTTAAGCATACCTCCTCGTGATGGTTCTCAAACCATAGAAAATTCTAGACAGGTTTCTACACTTTCTCTTTAATCTTCAACTTCTCTTCTTATTAATCACCCGTTCAAAATCAAGGTTGGTAATAGTGTTAAGAACCTATAAAATGGACCTTTACTTTGTTGAACTCATGACTAAATCTCGGCACCTAAGCAAGACTCTTCACCCTGTCAACACACAGTATCTGCAATAGCCTTTTTCTGTTCTTGCATAAATGACAAGATAACAAAAGGTAACTTTGTGATTCCGGGTGTTTGCATATTTCTTACCACTGTGGAGACAAAATCATGTAGGGCAATCTTCTCTGGAGCTTGTCATGCCTCATGCGTAGTGATAGCCTTATGTGATAATTCTGAAACGATAAACTGGTAGTGTCCTTTCCAAAGGAGGTGTTGCTCGATTTTGTATTGAGAGGAGTGGTTTCATAGTTCACATCTATTACGTTCCTTCATAGAGTTTTTTTTTCTTAATGAGAAACATGTGATTCATTTCATTGATGGTATGAAATGTACAAAAAGGGTAAAGTATCCAATTACAAAAGACTTTCCCAAGTATGAAGAAGGGAAGTGAGACTGTAATCACTAAAATGTGAAGAGAATTTACACCAAGATAAAGCCAAGTAAAGAAGATATTCCTAAACCATGTGAGGATACCGGGCCTTATCATTGAAGAGTTTGTTGTTTCTTTCAAGCCAAATGGACCAAAAAAGTGCTTTGACAATATTGCCCTTAAGCAGGCCTTCCCCCGTGTGTATGGATGCCCCATTAATAAAACTTCGAGAATCGCAGTCATGGAGTCAGGGATAACCATTTGTAGATTTGAGGCATTTAGGATTTTACCCCATACTTGCTGTAAAAGGGCAAGTCACAAAGATATGTCTTGCGGATTAATTATCCTTTTTGCATAGAACGCTCCAATTTGGGGAAGATACGATCCAAGGAGCCTTTCTCATTAGTGTGTCTGATGTTCCTCCATAGAGTAGTTTCTTCCAATCCCTTTTGCCAAGAGGGCTTGTTTTTATCTTTGAGGCTATGTAAACCGAGCCCTCCTTTCTTAATGGAAAGAAGAGGATTTTCCTATTTGACTAGATGCAAACCTTTCTTGTCATCATTACCTTTCCAAAGAAAGTTTCTGATTAATCTTTCAATGATGGTGATCACCTTGGCAGGCATTAGGAAGATAGGCATATAGTACATCGAAAGATTTGATAATGTTGCTTGGATGAGTGAGAGTCCACCACCCTTTCATATGTGTGAGTTTCTTCCATGAAAGAAGCCTTTTTTCCACCTTTTCAATCATAGGCTCCCAAAAAACCTTAGATCTAGGTTTACCATTGAGCGGGAGACCAAGATGTGTCACTGGCCAAAAACTAACTTTGCAACCATGTTTATGAGCGAGAGATTATACTTCCTGATTTTCTAAGTTAATACACAACAATTCAATTTTTTGGTGGTTTGCATTGAGCCGTGATGCCACCACAAAGAGTCTCACACTGTGGAGCAAGTTATCAAGACCTTGGTCTTCATTAATTGAGAATAAGATTGTGTCCTCGGCAAATTGAATGTGATATAGATTCAGAGAAACCTTTTATCACATTTCGCAGCATGTGAGGCAACTAAAACAGTCCACAACCAAAATAAAGAGTAAGGGACAAAGGGAATTACCTTGCCAAAGACCTCCAGAAGCTAGAATTTTTTTTTTCAAGCGACCACCTATGATGATTGAGAAGTTTGGGGAGGAGATGCAACCCCTAATCCATTTCCTCCATGTTGGGCCAAAGCCTTAGCCATAATAATCTCTAAAAACTCCCAATCAACCTTGTATAAGGACTTTTTGATGTCTAGTTTAATTATCACCCCTTTCTTTTTTTTCCTTCTCCATTCGTCAATAAGCTCATTGGCTATAAGTGATGCATCAAGAATTTGTCTTTTGCCCAGAAAATTTTTTCTGTTCTCATGCTTCATCTTCATATGCTAGTTATTTTTTTAATTGAAAATAAGTTAGAATATGTTTCTATTTGTTTTTTGGCCTGTTCTCATGCTTCATAGTACACTATATTCTTCATATGCTTGTTATTTTTTTTAATTGAAAATAAGTTAGAACATGTTTCTATTGTTTGTACTTGGGCTTTTGTGATATTTTGGTTCTTTTACAGTTTTACTTTTTGTAATGATTTAGACCTTGTACTTTCATAATTTAATGTTGAGACACAAACACTGTCGTTAAAATAGAAGTTTGAAATAAAATTTTGAAGATAAATTCTGTAAGTACAAGATTATAAGGGGATCGCCTTGTTGATGACCTCTAGAAGCTAGGAAGAAAAGAGCCAAGGGAGAACAACAACAACAACAACCCAGCCACTATCAACATTATCGAATCTTACAAAAATAAATAAATTAAATAAAATTGATTACATTAATGGTGTAGAAAGAAAATGGACTTGACAGAGAACACAAAAAAGAAGCAGAACTCTTTGCAAAATCCCATCTAACGACTCATTGAGGCCTTTTGTTTTCAAAGATTCTTTGGTTCCTTGAGACTAAATACTCCAAAGAATAGCTTTGACCGCATTTCTTCAAAATAGTTTAGCCTTTTTCTTCGATAGCACATTAGTTGAAAGATATTCTAGAACTTTTATCACACGCCCATGCCAAAATGAAAGTCTTGAAGAGCTGTTGTCAAATCTTACTATTATAGGCACAGTGAATAGATAAAGATTAATCTTCCCCTGCTAAAGAACATTATTTGCAATATCGGGTGTTCTATTTCGAATTCTTTTTCTAATTACAACTTTGTACCTATCTTGACCAATTGGGCCTCCTTTTTGTAACCCTCTTTTGTATCTTCTTTCCGTCAATACATGATCTCTCTCATAGAAAAGAAAGGAAGAAAGAAAAAAAAATCAAAGCAAGGCACTTGAACTGAATTTTGTCCACGGTGTCAAGTTTACTCAAATGAGCCAACCAAATCAAAATATTATTTTTTGGGTTTATTTTATTTTATTTATTTATTTTTTTTTACCTTTGAACTTAGTAAGGTGCACCAATTTTCAAAACTTTTAGGGGTTGTTTGGCCCCTTGTTTTAGAATTAGAACCTTGGGAGTTTGTTTTGAGAGATTTTGAAGCCTGAAAATCAGAAAACTGTGTTTGGAGTATAGTGTTATGAAGCTGGGGAATTAGAAAACAATGTTTGGGATTTAGTGTTCTGAATCATGGGTTTGTGCAGGTTTTTTCCCTCATTTTCCTTTGGTTGTTTTGTTCTCTTATTTTCTACTTGTTTTTCATGGATGTTTTATGAATTGTAGAACCCCTTGTATAACATAACCGAGTTACAAAATTGAAACTCTATTTTAGAAATTAAAAATTGAAAGTCTATTTAAGAAATTTGGAAATTTAAAGCTCTATTTCACAAAATATTTAGGTTTTTGGAACTCTATTTTAGAAATTAAAAATTGGAAGTCTATTTAAAAAATGAGTGAGTTTAAAACTCTATTTCACAAAATATTCAAAAACCTAATTTTGTAATTTTATTTTAAAAATTAAAAAATTGGAAGTTTATTTAAGAAGTTAGGGAATTTAAAATTCTATTTCACAAAGTATTAAAAAAAAATCTATTTTTGGAACTATATTTAGAAATTAAAAATTTGGAAGCCTATTTAAGAAATTAGTGAATTTGAAACCCTATTCCACAAGGCATTCAAAAACCTATTTTTGAGACTTTGTTTTAGAAATTTAAAAATTGGAAATCTATTAAAGAAAATTAAGGAATTTAAAACTCTATTTACAAAGTATTCAAAAACTTATTTTTGGAACTCTATTTTAGAAATTAAAAATTTTGTTTAGTAGCCATTTTTTGTTTAATTTTAACCTTTTAAAAAATTAACTAGATGGTTGGGTCACTGGGTGGTCGTCATCGAGTCGTTGGTGTGGTCATTGGGGTTGTCGTTGGCAGTATTGCCTGGTGATCGACAACAATGGTTGTCAAGTGATCAAGTCACCAAGGTGATTGTCGACGATGGATGCCAAGTGGTCACTGGTCATTGGGGTGATCGCTGAAGTGATCATCAGGATAGTCCGGTCACTAGAGTGGTCACAGGTGGTCGTTAGTGGTGGTTATTGGGTCGTCGAGGTGGTCAGGTCATCAGAGTGGTTGCCAAGTGATCGTTGGTGGTGTGCCAAGTTTTTGGGGTGGTCAAGTTTCTCGAGTGGTTAGGTTGGGGTGGTCGAGTCGCAGAGGTGATCATCATACTAGTCTCTAGAGTGGTAGCCAGAGGTAGTCGTCAGTGGTGGTTAGATCAACAGTGTGGTTGTCGGAGTTGTCGCTAACGGTGGTTGTCGGGTGGTCGTTGGAGTTGTTGTTGAAGTTGTCGTCAGAAAGGGAAGATGGCAGATGGAAGAAGAAAACGTGGCATAAACCCATGAGTTCCACTGTTGTAAATCATGGAGTTGTGTTTGGTTTTGAACACATTGGACCGAACATGTTAGAATTCAAAATCATCCAAATTCAAAACAGGGGCTCGAACGACCCCTTAATTTCATCCCATTGAACTTAAACTTATACAACTTATGCTATTTTTACCTCAGGTTCAATTTTTGTTCCTTTCACCTACTATATTTAACCAAAAAAAAAAAAACAAAGTAAAAATCTCTGGAAACTTAGACAACAAAAATCTTTAAGCCTTACGCAAAATTAAGTCCAATCAGTGCACAAGATTGGCCATTGAATCAATCTCCTAGAATGCACAAATTTCAACCAAAATCCTAACTCTTGTATTTTTTTTTTTTTTGAGTTAAAAATCACTTTTGGCCTTTGAACTTTTATCAAGGTAACAAGTCCCTGAATTTTAATTTGTAATGATTTAGACCTTATACTTTTAAATTTATATCAATTTAGTCCTTTCCGTAGGTAACAATTTAGTCTTTGTACTTTGCCTTTTGTGATGAGTTTGTCTCTATCATGAAAAATATTGTTAAAATATAATGAAATTCTTGATATATGTAGATCGATAGACTGATTGGGACCAAACGTGTTTATAAATTATAAGGACTAAATCGTTGCATAATAAAAATGGACACTATAAAAATGTTCATTGTGGGATTGAGTTGATAGGACTAAATTGTTACCAATTAAAGTTTAGGAACTAAATTATTATAAATAAGAAAGTACATAGACTAAATTTTACAAATTAAAGTTCATGGACTAAATTGTTACGTTTATGAATTCAGGGACCAAAAGTATTTTTTTTTGCCATTATTTGAAGCCCCATCAATTTCATATTGTACATATGTTTTATGCACATGTTTTTCTGTTTGGGGAAGGATTAACAAAAAAAAACATTTCAGATTTTGGCTCTTATTTCACGGATATGATTGCAGTATCTGTTCTTTTGCTATCCCTCCTCTTTTGGGAACTTCAAAGAGCGACAATTATCTTTTGTTTTTTAAAGTTATTTTCATTGCTCTATCACTTGAATAATGAAGAAACCTGGACACAGAGCATAGATTACCGACTTAAGTTTTTTATATTTCATTCAACCAGCTTGCAGTCAGAAGCTCTTTTTTTTTTTTTTTTCCTTTATAGTTCAATTGGTCAAAGTATGTTCTCGTTAGCCAAGTTTGTTAGGATTTTCATACCAGTTTTATAAAAGCTATAGATGCTTTTCATATTTTTTTTTTTTTTTCATTTCTGCAATCTATCTGTTAATTTATAGTATACCTAATTGCTATATCTTATTTTTCCTAATATATTAGAATCTTTCTACTAGTGCCATTATGTTGAAGTTACTTTTACGTCATTCTTCACAGATATAGCTGGGACATATGGTCGTACATTTCGCGAGCGAATGACGAATTACATGGCTACTCTCGACATCAATTCACAAATTGGAAGCTGCATGCCACTTTCTGCAATGCGTATCGGTACAATCATCCACAACATCGAGATGAATCCGGGTCAAGGCGGGAAGCTCGTCCGATCAGCAGGAGCATGTGCAAAGATATTAAAAGAGCCAACTTCAAGATACTGTTTGGTGAAACTCCCTTCAGGTACAGAGAAGTTGATTGATTCTCGGTGCAGGGCGACGATCGGTCAGGTGTCAAACCCAAGCCATGGAACCCGGAAACTGAGAAAGGCAGGGCAGAGCCGGTGGTTGGGTCGACGACCGGTGGTTCGAGGAGTGGCGATGAACCCGGTGGATCATCCTCATGGAGGAGGTGAGGGTAGGAGTAAGAGTAGTGGGAGCTTTGGAAAGGGGTCTCGCACACCCTGGGGGAAGCCAACTAAGTGTGGTTACAAGACTGGACCTCTCAAGCGCAAAAAATAGAAGTAACAACTCTTCATCTTTTATTGATTGTTTTTTTTTTTCCTCTCTTTTTAAATCAATTTTCTTGAGGATAGTGTGAAATGTTTTCCTTTTTAGCCTTTTGATTGAGTTGAATTACACATTGACTGACCATCAAACTAATATTTGAAGGAAATTGGTGTAGAATTTCCCCTTTTTCTGCTAAATAATGAGTGGGGGAGGGTTAAATGTTGTATGTATAAACAATTGGATCTCTGATTTTCACCCATGGTGATTAGAGTTATTTTGGAGCTGC

mRNA sequence

CTCAATTTCACATCTGTTTTGAGTTCATGGCTACAATTTCAATTACCTCACATTTTGATTTTGCTTTATGAAGAAACCCAGAAAGGTCATGGCTATGAAATCCGCGGCCTCTGTGGCTCTTCGGGGCCTCAGGAGGTTCTCCTCCAAAAGTTCAATTTCAGCTTCTTCTCGGGCTTCGGTCAATCAGGACCCCACCTCCGACCTCTTAGTTTCTGATATAGCTGGGACATATGGTCGTACATTTCGCGAGCGAATGACGAATTACATGGCTACTCTCGACATCAATTCACAAATTGGAAGCTGCATGCCACTTTCTGCAATGCGTATCGGTACAATCATCCACAACATCGAGATGAATCCGGGTCAAGGCGGGAAGCTCGTCCGATCAGCAGGAGCATGTGCAAAGATATTAAAAGAGCCAACTTCAAGATACTGTTTGGTGAAACTCCCTTCAGGTACAGAGAAGTTGATTGATTCTCGGTGCAGGGCGACGATCGGTCAGGTGTCAAACCCAAGCCATGGAACCCGGAAACTGAGAAAGGCAGGGCAGAGCCGGTGGTTGGGTCGACGACCGGTGGTTCGAGGAGTGGCGATGAACCCGGTGGATCATCCTCATGGAGGAGGTGAGGGTAGGAGTAAGAGTAGTGGGAGCTTTGGAAAGGGGTCTCGCACACCCTGGGGGAAGCCAACTAAGTGTGGTTACAAGACTGGACCTCTCAAGCGCAAAAAATAGAAGTAACAACTCTTCATCTTTTATTGATTGTTTTTTTTTTTCCTCTCTTTTTAAATCAATTTTCTTGAGGATAGTGTGAAATGTTTTCCTTTTTAGCCTTTTGATTGAGTTGAATTACACATTGACTGACCATCAAACTAATATTTGAAGGAAATTGGTGTAGAATTTCCCCTTTTTCTGCTAAATAATGAGTGGGGGAGGGTTAAATGTTGTATGTATAAACAATTGGATCTCTGATTTTCACCCATGGTGATTAGAGTTATTTTGGAGCTGC

Coding sequence (CDS)

ATGAAGAAACCCAGAAAGGTCATGGCTATGAAATCCGCGGCCTCTGTGGCTCTTCGGGGCCTCAGGAGGTTCTCCTCCAAAAGTTCAATTTCAGCTTCTTCTCGGGCTTCGGTCAATCAGGACCCCACCTCCGACCTCTTAGTTTCTGATATAGCTGGGACATATGGTCGTACATTTCGCGAGCGAATGACGAATTACATGGCTACTCTCGACATCAATTCACAAATTGGAAGCTGCATGCCACTTTCTGCAATGCGTATCGGTACAATCATCCACAACATCGAGATGAATCCGGGTCAAGGCGGGAAGCTCGTCCGATCAGCAGGAGCATGTGCAAAGATATTAAAAGAGCCAACTTCAAGATACTGTTTGGTGAAACTCCCTTCAGGTACAGAGAAGTTGATTGATTCTCGGTGCAGGGCGACGATCGGTCAGGTGTCAAACCCAAGCCATGGAACCCGGAAACTGAGAAAGGCAGGGCAGAGCCGGTGGTTGGGTCGACGACCGGTGGTTCGAGGAGTGGCGATGAACCCGGTGGATCATCCTCATGGAGGAGGTGAGGGTAGGAGTAAGAGTAGTGGGAGCTTTGGAAAGGGGTCTCGCACACCCTGGGGGAAGCCAACTAAGTGTGGTTACAAGACTGGACCTCTCAAGCGCAAAAAATAG

Protein sequence

MKKPRKVMAMKSAASVALRGLRRFSSKSSISASSRASVNQDPTSDLLVSDIAGTYGRTFRERMTNYMATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGACAKILKEPTSRYCLVKLPSGTEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK

Homology

[Close]

BLAST of Tan0000947 vs. ExPASy Swiss-Prot
Match: P0C8K6 (60S ribosomal protein L2, mitochondrial OS=Oryza sativa OX=4530 GN=RPL2 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.9e-53
Identity = 101/146 (69.18%), Postives = 123/146 (84.25%), Query Frame = 0


Query: 70  LDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGACAKILKEPTSRYCLVKLPS 129
           LD+NS++G+ +PL+ +R+GT +H+IE +PGQG KL R+AG  AKI+KEP S+ CLV+LPS
Sbjct: 354 LDLNSKVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKEPASQ-CLVRLPS 413

Query: 130 GTEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGR 189
           G EKLIDSRCRATIG VSNP+HG RKLRKAGQSRW GRRP+VRGVAMNPVDHPHGGGEGR
Sbjct: 414 GVEKLIDSRCRATIGIVSNPNHGARKLRKAGQSRWSGRRPIVRGVAMNPVDHPHGGGEGR 473

Query: 190 SKSSGSFGKGSRTPWGKPTKCGYKTG 216
           +K     G+ S +PWGKPTK G++ G
Sbjct: 474 TKG----GRPSVSPWGKPTKAGFRAG 494

[Close]

BLAST of Tan0000947 vs. ExPASy Swiss-Prot
Match: Q2F969 (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=RPL2 PE=3 SV=2)

HSP 1 Score: 209.9 bits (533), Expect = 2.9e-53
Identity = 101/146 (69.18%), Postives = 123/146 (84.25%), Query Frame = 0


Query: 70  LDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGACAKILKEPTSRYCLVKLPS 129
           LD+NS++G+ +PL+ +R+GT +H+IE +PGQG KL R+AG  AKI+KEP S+ CLV+LPS
Sbjct: 354 LDLNSKVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKEPASQ-CLVRLPS 413

Query: 130 GTEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGR 189
           G EKLIDSRCRATIG VSNP+HG RKLRKAGQSRW GRRP+VRGVAMNPVDHPHGGGEGR
Sbjct: 414 GVEKLIDSRCRATIGIVSNPNHGARKLRKAGQSRWSGRRPIVRGVAMNPVDHPHGGGEGR 473

Query: 190 SKSSGSFGKGSRTPWGKPTKCGYKTG 216
           +K     G+ S +PWGKPTK G++ G
Sbjct: 474 TKG----GRPSVSPWGKPTKAGFRAG 494

[Close]

BLAST of Tan0000947 vs. ExPASy Swiss-Prot
Match: P92812 (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=RPL2 PE=2 SV=2)

HSP 1 Score: 209.9 bits (533), Expect = 2.9e-53
Identity = 101/146 (69.18%), Postives = 123/146 (84.25%), Query Frame = 0


Query: 70  LDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGACAKILKEPTSRYCLVKLPS 129
           LD+NS++G+ +PL+ +R+GT +H+IE +PGQG KL R+AG  AKI+KEP S+ CLV+LPS
Sbjct: 354 LDLNSKVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKIIKEPASQ-CLVRLPS 413

Query: 130 GTEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGR 189
           G EKLIDSRCRATIG VSNP+HG RKLRKAGQSRW GRRP+VRGVAMNPVDHPHGGGEGR
Sbjct: 414 GVEKLIDSRCRATIGIVSNPNHGARKLRKAGQSRWSGRRPIVRGVAMNPVDHPHGGGEGR 473

Query: 190 SKSSGSFGKGSRTPWGKPTKCGYKTG 216
           +K     G+ S +PWGKPTK G++ G
Sbjct: 474 TKG----GRPSVSPWGKPTKAGFRAG 494

[Close]

BLAST of Tan0000947 vs. ExPASy Swiss-Prot
Match: P26859 (60S ribosomal protein L2, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL2 PE=3 SV=2)

HSP 1 Score: 191.0 bits (484), Expect = 1.4e-47
Identity = 95/146 (65.07%), Postives = 115/146 (78.77%), Query Frame = 0


Query: 76  IGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGACAKIL-KEPTSRYCLVKLPSGTEKL 135
           +G+C+PL+ + IGT +HNIE NPGQG KL R+AG  A+I+ K   +  C+V+LPSG +KL
Sbjct: 359 VGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKL 418

Query: 136 IDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSG 195
           IDSRCRATIG VSN +HG RK  KAGQSRWLGRRP+VRGVAMNPVDHPHGGGEGR+K   
Sbjct: 419 IDSRCRATIGIVSNLNHGKRKFNKAGQSRWLGRRPIVRGVAMNPVDHPHGGGEGRTKG-- 478

Query: 196 SFGKGSRTPWGKPTKCGYKTGPLKRK 221
             G+ S +PWGKPTK G+KT   KR+
Sbjct: 479 --GRPSVSPWGKPTKGGFKTVVRKRR 500

[Close]

BLAST of Tan0000947 vs. ExPASy Swiss-Prot
Match: O21247 (60S ribosomal protein L2, mitochondrial OS=Reclinomonas americana OX=48483 GN=RPL2 PE=3 SV=2)

HSP 1 Score: 158.7 bits (400), Expect = 7.7e-38
Identity = 79/139 (56.83%), Postives = 107/139 (76.98%), Query Frame = 0


Query: 71  DINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGACAKILKEPTSRYCLVKLPSG 130
           DI+ +IG+ +PL  + IGT+IHNIE+NPG+GGK+VRSAG+ A+++ +  + +C++KLPSG
Sbjct: 121 DIDIRIGNTLPLRNIPIGTMIHNIELNPGKGGKIVRSAGSSAQLISKDENGFCMLKLPSG 180

Query: 131 TEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRS 190
             +L  +   ATIG +SN  +   K+ KAG+SRW+GRRP+VRGVAMNPVDHPHGGGEG  
Sbjct: 181 EYRLFPNNSLATIGILSNIDNKNIKIGKAGRSRWMGRRPIVRGVAMNPVDHPHGGGEG-- 240

Query: 191 KSSGSFGKGSRTPWGKPTK 210
           K+SG  G+ S TPW  PTK
Sbjct: 241 KTSG--GRPSVTPWSWPTK 255

[Close]

BLAST of Tan0000947 vs. NCBI nr
Match: XP_022158562.1 (uncharacterized protein LOC111025017 [Momordica charantia] >XP_022158563.1 uncharacterized protein LOC111025017 [Momordica charantia] >XP_022158564.1 uncharacterized protein LOC111025017 [Momordica charantia])

HSP 1 Score: 402.9 bits (1034), Expect = 1.8e-108
Identity = 201/214 (93.93%), Postives = 211/214 (98.60%), Query Frame = 0


Query: 8   MAMKSAASVALRGLRRFSSKSSISASSRASVNQDPTSDLLVSDIAGTYGRTFRERMTNYM 67
           MAM+SAASVALRGLRRFSSK+SIS S+RAS+NQ+P+SDLLVSDIAGTYGRTFRERMTNYM
Sbjct: 1   MAMRSAASVALRGLRRFSSKTSISGSTRASINQEPSSDLLVSDIAGTYGRTFRERMTNYM 60

Query: 68  ATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGACAKILKEPTSRYCLVKL 127
           ATLDINSQIGSCMPLSAMRIGT+IHNIEMNPGQGGKLVR+AG CAKILKEPTSRYCLV+L
Sbjct: 61  ATLDINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRYCLVRL 120

Query: 128 PSGTEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGE 187
           PSGTEKLIDSRCRATIGQVSNPSHGT+KLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGE
Sbjct: 121 PSGTEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGE 180

Query: 188 GRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK 222
           GRSKSSGSFGKGSRTPWGKPTK GYKTGPLKRKK
Sbjct: 181 GRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK 214

[Close]

BLAST of Tan0000947 vs. NCBI nr
Match: XP_022971723.1 (uncharacterized protein LOC111470392 [Cucurbita maxima])

HSP 1 Score: 394.8 bits (1013), Expect = 4.8e-106
Identity = 200/214 (93.46%), Postives = 206/214 (96.26%), Query Frame = 0


Query: 8   MAMKSAASVALRGLRRFSSKSSISASSRASVNQDPTSDLLVSDIAGTYGRTFRERMTNYM 67
           MAMKSAASVALRGLR FSS+SSIS    A +N++PTSDLLVSDIAGTYGRTFRERMTNYM
Sbjct: 1   MAMKSAASVALRGLRSFSSRSSIS----APINKEPTSDLLVSDIAGTYGRTFRERMTNYM 60

Query: 68  ATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGACAKILKEPTSRYCLVKL 127
           ATLDINSQIGSCMPLSAMRIGTIIHNI MNPGQGGKLVRSAG CAKILKEPTSRYCLV+L
Sbjct: 61  ATLDINSQIGSCMPLSAMRIGTIIHNIGMNPGQGGKLVRSAGTCAKILKEPTSRYCLVRL 120

Query: 128 PSGTEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGE 187
           PSGTEKLIDS+CRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGE
Sbjct: 121 PSGTEKLIDSKCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGE 180

Query: 188 GRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK 222
           GRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK
Sbjct: 181 GRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK 210

[Close]

BLAST of Tan0000947 vs. NCBI nr
Match: XP_022932015.1 (uncharacterized protein LOC111438344 [Cucurbita moschata])

HSP 1 Score: 392.5 bits (1007), Expect = 2.4e-105
Identity = 198/214 (92.52%), Postives = 205/214 (95.79%), Query Frame = 0


Query: 8   MAMKSAASVALRGLRRFSSKSSISASSRASVNQDPTSDLLVSDIAGTYGRTFRERMTNYM 67
           MAMKSAAS ALRGLR FSS+SSIS    A +N++PTSDLLVSDIAGTYGRT RERMTNYM
Sbjct: 1   MAMKSAASAALRGLRSFSSRSSIS----APINKEPTSDLLVSDIAGTYGRTLRERMTNYM 60

Query: 68  ATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGACAKILKEPTSRYCLVKL 127
           ATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVR+AG CAKILKEPTSRYCLV+L
Sbjct: 61  ATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRYCLVRL 120

Query: 128 PSGTEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGE 187
           PSGTEKLIDS+CRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGE
Sbjct: 121 PSGTEKLIDSKCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGE 180

Query: 188 GRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK 222
           GRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK
Sbjct: 181 GRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK 210

[Close]

BLAST of Tan0000947 vs. NCBI nr
Match: XP_023512394.1 (uncharacterized protein LOC111777160 [Cucurbita pepo subsp. pepo] >KAG6571355.1 60S ribosomal protein L2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011127.1 60S ribosomal protein L2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 392.5 bits (1007), Expect = 2.4e-105
Identity = 198/214 (92.52%), Postives = 205/214 (95.79%), Query Frame = 0


Query: 8   MAMKSAASVALRGLRRFSSKSSISASSRASVNQDPTSDLLVSDIAGTYGRTFRERMTNYM 67
           MAMKSAASVALRGLR FSS+SSIS    A +N+DP +DLLVSDIAGTYGRT RERMTNYM
Sbjct: 1   MAMKSAASVALRGLRSFSSRSSIS----APINKDPNADLLVSDIAGTYGRTLRERMTNYM 60

Query: 68  ATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGACAKILKEPTSRYCLVKL 127
           ATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVR+AG CAKILKEPTSRYCLV+L
Sbjct: 61  ATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRYCLVRL 120

Query: 128 PSGTEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGE 187
           PSGTEKLIDS+CRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGE
Sbjct: 121 PSGTEKLIDSKCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGE 180

Query: 188 GRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK 222
           GRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK
Sbjct: 181 GRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK 210

[Close]

BLAST of Tan0000947 vs. NCBI nr
Match: XP_023007225.1 (uncharacterized protein LOC111499776 isoform X1 [Cucurbita maxima])

HSP 1 Score: 388.3 bits (996), Expect = 4.5e-104
Identity = 197/219 (89.95%), Postives = 208/219 (94.98%), Query Frame = 0


Query: 3   KPRKVMAMKSAASVALRGLRRFSSKSSISASSRASVNQDPTSDLLVSDIAGTYGRTFRER 62
           K RKVMAM+SAASVALRGLR FSSKSS S S+RAS+NQDP++D  VSD+AG YGRT RER
Sbjct: 57  KSRKVMAMRSAASVALRGLRSFSSKSSNSVSTRASINQDPSTD-FVSDLAGMYGRTLRER 116

Query: 63  MTNYMATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGACAKILKEPTSRY 122
           M+NYMAT+DINSQIGSCMPLSAMRIGTIIHN+E+NPGQGGKLVRSAG CAKILKEPTSRY
Sbjct: 117 MSNYMATIDINSQIGSCMPLSAMRIGTIIHNLEINPGQGGKLVRSAGTCAKILKEPTSRY 176

Query: 123 CLVKLPSGTEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHP 182
           CLV+LPSGTEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHP
Sbjct: 177 CLVRLPSGTEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHP 236

Query: 183 HGGGEGRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK 222
           HGGGEGRSKSSGSFGKGSRTPWGKPTK GYKTG LKRKK
Sbjct: 237 HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGTLKRKK 274

[Close]

BLAST of Tan0000947 vs. ExPASy TrEMBL
Match: A0A6J1DZS5 (uncharacterized protein LOC111025017 OS=Momordica charantia OX=3673 GN=LOC111025017 PE=3 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 8.6e-109
Identity = 201/214 (93.93%), Postives = 211/214 (98.60%), Query Frame = 0


Query: 8   MAMKSAASVALRGLRRFSSKSSISASSRASVNQDPTSDLLVSDIAGTYGRTFRERMTNYM 67
           MAM+SAASVALRGLRRFSSK+SIS S+RAS+NQ+P+SDLLVSDIAGTYGRTFRERMTNYM
Sbjct: 1   MAMRSAASVALRGLRRFSSKTSISGSTRASINQEPSSDLLVSDIAGTYGRTFRERMTNYM 60

Query: 68  ATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGACAKILKEPTSRYCLVKL 127
           ATLDINSQIGSCMPLSAMRIGT+IHNIEMNPGQGGKLVR+AG CAKILKEPTSRYCLV+L
Sbjct: 61  ATLDINSQIGSCMPLSAMRIGTMIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRYCLVRL 120

Query: 128 PSGTEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGE 187
           PSGTEKLIDSRCRATIGQVSNPSHGT+KLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGE
Sbjct: 121 PSGTEKLIDSRCRATIGQVSNPSHGTKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGE 180

Query: 188 GRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK 222
           GRSKSSGSFGKGSRTPWGKPTK GYKTGPLKRKK
Sbjct: 181 GRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK 214

[Close]

BLAST of Tan0000947 vs. ExPASy TrEMBL
Match: A0A6J1I7S9 (uncharacterized protein LOC111470392 OS=Cucurbita maxima OX=3661 GN=LOC111470392 PE=3 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.3e-106
Identity = 200/214 (93.46%), Postives = 206/214 (96.26%), Query Frame = 0


Query: 8   MAMKSAASVALRGLRRFSSKSSISASSRASVNQDPTSDLLVSDIAGTYGRTFRERMTNYM 67
           MAMKSAASVALRGLR FSS+SSIS    A +N++PTSDLLVSDIAGTYGRTFRERMTNYM
Sbjct: 1   MAMKSAASVALRGLRSFSSRSSIS----APINKEPTSDLLVSDIAGTYGRTFRERMTNYM 60

Query: 68  ATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGACAKILKEPTSRYCLVKL 127
           ATLDINSQIGSCMPLSAMRIGTIIHNI MNPGQGGKLVRSAG CAKILKEPTSRYCLV+L
Sbjct: 61  ATLDINSQIGSCMPLSAMRIGTIIHNIGMNPGQGGKLVRSAGTCAKILKEPTSRYCLVRL 120

Query: 128 PSGTEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGE 187
           PSGTEKLIDS+CRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGE
Sbjct: 121 PSGTEKLIDSKCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGE 180

Query: 188 GRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK 222
           GRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK
Sbjct: 181 GRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK 210

[Close]

BLAST of Tan0000947 vs. ExPASy TrEMBL
Match: A0A6J1F113 (uncharacterized protein LOC111438344 OS=Cucurbita moschata OX=3662 GN=LOC111438344 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.2e-105
Identity = 198/214 (92.52%), Postives = 205/214 (95.79%), Query Frame = 0


Query: 8   MAMKSAASVALRGLRRFSSKSSISASSRASVNQDPTSDLLVSDIAGTYGRTFRERMTNYM 67
           MAMKSAAS ALRGLR FSS+SSIS    A +N++PTSDLLVSDIAGTYGRT RERMTNYM
Sbjct: 1   MAMKSAASAALRGLRSFSSRSSIS----APINKEPTSDLLVSDIAGTYGRTLRERMTNYM 60

Query: 68  ATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGACAKILKEPTSRYCLVKL 127
           ATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVR+AG CAKILKEPTSRYCLV+L
Sbjct: 61  ATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRAAGTCAKILKEPTSRYCLVRL 120

Query: 128 PSGTEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGE 187
           PSGTEKLIDS+CRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGE
Sbjct: 121 PSGTEKLIDSKCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGE 180

Query: 188 GRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK 222
           GRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK
Sbjct: 181 GRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK 210

[Close]

BLAST of Tan0000947 vs. ExPASy TrEMBL
Match: A0A6J1L2E1 (uncharacterized protein LOC111499776 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499776 PE=3 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.2e-104
Identity = 197/219 (89.95%), Postives = 208/219 (94.98%), Query Frame = 0


Query: 3   KPRKVMAMKSAASVALRGLRRFSSKSSISASSRASVNQDPTSDLLVSDIAGTYGRTFRER 62
           K RKVMAM+SAASVALRGLR FSSKSS S S+RAS+NQDP++D  VSD+AG YGRT RER
Sbjct: 57  KSRKVMAMRSAASVALRGLRSFSSKSSNSVSTRASINQDPSTD-FVSDLAGMYGRTLRER 116

Query: 63  MTNYMATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGACAKILKEPTSRY 122
           M+NYMAT+DINSQIGSCMPLSAMRIGTIIHN+E+NPGQGGKLVRSAG CAKILKEPTSRY
Sbjct: 117 MSNYMATIDINSQIGSCMPLSAMRIGTIIHNLEINPGQGGKLVRSAGTCAKILKEPTSRY 176

Query: 123 CLVKLPSGTEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHP 182
           CLV+LPSGTEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHP
Sbjct: 177 CLVRLPSGTEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHP 236

Query: 183 HGGGEGRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK 222
           HGGGEGRSKSSGSFGKGSRTPWGKPTK GYKTG LKRKK
Sbjct: 237 HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGTLKRKK 274

[Close]

BLAST of Tan0000947 vs. ExPASy TrEMBL
Match: A0A6J1G8M5 (uncharacterized protein LOC111451827 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451827 PE=3 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.9e-104
Identity = 198/219 (90.41%), Postives = 207/219 (94.52%), Query Frame = 0


Query: 3   KPRKVMAMKSAASVALRGLRRFSSKSSISASSRASVNQDPTSDLLVSDIAGTYGRTFRER 62
           K RKVMAM+SAASVALRGLR FSSKSS S S+RAS+NQD TSD  VSD+AG  GRT RER
Sbjct: 57  KSRKVMAMRSAASVALRGLRSFSSKSSNSVSTRASINQDATSD-FVSDLAGMDGRTLRER 116

Query: 63  MTNYMATLDINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGACAKILKEPTSRY 122
           M+NYMAT+DINSQIGSCMPLSAMRIGTIIHN+E+NPGQGGKLVRSAG CAKILKEPTSRY
Sbjct: 117 MSNYMATIDINSQIGSCMPLSAMRIGTIIHNLEINPGQGGKLVRSAGTCAKILKEPTSRY 176

Query: 123 CLVKLPSGTEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHP 182
           CLV+LPSGTEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHP
Sbjct: 177 CLVRLPSGTEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHP 236

Query: 183 HGGGEGRSKSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK 222
           HGGGEGRSKSSGSFGKGSRTPWGKPTK GYKTGPLKRKK
Sbjct: 237 HGGGEGRSKSSGSFGKGSRTPWGKPTKSGYKTGPLKRKK 274

[Close]

BLAST of Tan0000947 vs. TAIR 10
Match: AT2G44065.1 (Ribosomal protein L2 family )

HSP 1 Score: 229.9 bits (585), Expect = 1.9e-60
Identity = 122/196 (62.24%), Postives = 145/196 (73.98%), Query Frame = 0


Query: 26  SKSSISASSRASVNQDPTSDLLVSDIAGTYGRTFRERMTNYMATLDINSQIGSCMPLSAM 85
           +++S S+S   SV + P      +  A T  ++   +M   M  +DINS IGS MPL  M
Sbjct: 10  ARASASSSLFNSVIR-PAFRNFSTGFADTQNKSLVAQMKEEMLHMDINSMIGSSMPLGMM 69

Query: 86  RIGTIIHNIEMNPGQGGKLVRSAGACAKILKEPTSRYCLVKLPSGTEKLIDSRCRATIGQ 145
           RIGTIIHNIEMNPGQG K+VR+AG  AKILKEP    CL+KLPSG  K I+++CRATIG 
Sbjct: 70  RIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKCLIKLPSGDTKWINAKCRATIGT 129

Query: 146 VSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGSFGKGSRTPWG 205
           VSNPSHGT+KL KAGQSRWLG RP VRGVAMNP DHPHGGGEG+SKSSGS G+ S +PWG
Sbjct: 130 VSNPSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKSKSSGSRGRTSVSPWG 189

Query: 206 KPTKCGYKTGPLKRKK 222
           KP K GYK+  +K+KK
Sbjct: 190 KPCKGGYKSASVKKKK 204

[Close]

BLAST of Tan0000947 vs. TAIR 10
Match: AT2G44065.2 (Ribosomal protein L2 family )

HSP 1 Score: 229.9 bits (585), Expect = 1.9e-60
Identity = 122/196 (62.24%), Postives = 145/196 (73.98%), Query Frame = 0


Query: 26  SKSSISASSRASVNQDPTSDLLVSDIAGTYGRTFRERMTNYMATLDINSQIGSCMPLSAM 85
           +++S S+S   SV + P      +  A T  ++   +M   M  +DINS IGS MPL  M
Sbjct: 10  ARASASSSLFNSVIR-PAFRNFSTGFADTQNKSLVAQMKEEMLHMDINSMIGSSMPLGMM 69

Query: 86  RIGTIIHNIEMNPGQGGKLVRSAGACAKILKEPTSRYCLVKLPSGTEKLIDSRCRATIGQ 145
           RIGTIIHNIEMNPGQG K+VR+AG  AKILKEP    CL+KLPSG  K I+++CRATIG 
Sbjct: 70  RIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKCLIKLPSGDTKWINAKCRATIGT 129

Query: 146 VSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGSFGKGSRTPWG 205
           VSNPSHGT+KL KAGQSRWLG RP VRGVAMNP DHPHGGGEG+SKSSGS G+ S +PWG
Sbjct: 130 VSNPSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKSKSSGSRGRTSVSPWG 189

Query: 206 KPTKCGYKTGPLKRKK 222
           KP K GYK+  +K+KK
Sbjct: 190 KPCKGGYKSASVKKKK 204

[Close]

BLAST of Tan0000947 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 134.4 bits (337), Expect = 1.1e-31
Identity = 74/151 (49.01%), Postives = 98/151 (64.90%), Query Frame = 0


Query: 71  DINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGACAKILKEPTSRYCLVKLPSG 130
           ++  ++G+ +PL+ M +GT IHNIE+  G+GG+L R+AGA AK++ +   +   +KLPSG
Sbjct: 119 EVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAK-EGKSATLKLPSG 178

Query: 131 TEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRS 190
             +LI   C AT+GQV N     + L +AG   WLG+RPVVRGV MNPVDHPHGGGEGR+
Sbjct: 179 EVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRA 238

Query: 191 KSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK 222
                  K   TPWG P   G +T   KRKK
Sbjct: 239 PIG---RKKPVTPWGYPA-LGRRT--RKRKK 262

[Close]

BLAST of Tan0000947 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 134.4 bits (337), Expect = 1.1e-31
Identity = 74/151 (49.01%), Postives = 98/151 (64.90%), Query Frame = 0


Query: 71  DINSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGACAKILKEPTSRYCLVKLPSG 130
           ++  ++G+ +PL+ M +GT IHNIE+  G+GG+L R+AGA AK++ +   +   +KLPSG
Sbjct: 119 EVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAK-EGKSATLKLPSG 178

Query: 131 TEKLIDSRCRATIGQVSNPSHGTRKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRS 190
             +LI   C AT+GQV N     + L +AG   WLG+RPVVRGV MNPVDHPHGGGEGR+
Sbjct: 179 EVRLISKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRA 238

Query: 191 KSSGSFGKGSRTPWGKPTKCGYKTGPLKRKK 222
                  K   TPWG P   G +T   KRKK
Sbjct: 239 PIG---RKKPVTPWGYPA-LGRRT--RKRKK 262

[Close]

BLAST of Tan0000947 vs. TAIR 10
Match: AT3G51190.1 (Ribosomal protein L2 family )

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-20
Identity = 53/120 (44.17%), Postives = 77/120 (64.17%), Query Frame = 0


Query: 73  NSQIGSCMPLSAMRIGTIIHNIEMNPGQGGKLVRSAGACAKIL-KEPTSRYCLVKLPSGT 132
           N  +G+ +PL ++  G +I N+E++ G  G L R++G  A ++   P S    VKLPSG+
Sbjct: 96  NLMVGNVLPLGSIPEGAVICNVELHVGDRGALARASGDYAIVIAHNPESNTTRVKLPSGS 155

Query: 133 EKLIDSRCRATIGQVSNPSHGTRKLRKAGQS--RWLGRR---PVVRGVAMNPVDHPHGGG 187
           +K++ S CRA IGQV+      + L KAG +  ++  +R   PVVRGVAMNPV+HPHGGG
Sbjct: 156 KKILPSACRAMIGQVAGGGRTEKPLLKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGG 215

The following BLAST results are available for this feature:

BLAST of Tan0000947 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C8K6	2.9e-53	69.18	60S ribosomal protein L2, mitochondrial OS=Oryza sativa OX=4530 GN=RPL2 PE=3 SV=...	[more]
Q2F969	2.9e-53	69.18	60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. indica OX=39946 G...	[more]
P92812	2.9e-53	69.18	60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947...	[more]
P26859	1.4e-47	65.07	60S ribosomal protein L2, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL2...	[more]
O21247	7.7e-38	56.83	60S ribosomal protein L2, mitochondrial OS=Reclinomonas americana OX=48483 GN=RP...	[more]

BLAST of Tan0000947 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158562.1	1.8e-108	93.93	uncharacterized protein LOC111025017 [Momordica charantia] >XP_022158563.1 uncha...	[more]
XP_022971723.1	4.8e-106	93.46	uncharacterized protein LOC111470392 [Cucurbita maxima]	[more]
XP_022932015.1	2.4e-105	92.52	uncharacterized protein LOC111438344 [Cucurbita moschata]	[more]
XP_023512394.1	2.4e-105	92.52	uncharacterized protein LOC111777160 [Cucurbita pepo subsp. pepo] >KAG6571355.1 ...	[more]
XP_023007225.1	4.5e-104	89.95	uncharacterized protein LOC111499776 isoform X1 [Cucurbita maxima]	[more]

BLAST of Tan0000947 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZS5	8.6e-109	93.93	uncharacterized protein LOC111025017 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1I7S9	2.3e-106	93.46	uncharacterized protein LOC111470392 OS=Cucurbita maxima OX=3661 GN=LOC111470392...	[more]
A0A6J1F113	1.2e-105	92.52	uncharacterized protein LOC111438344 OS=Cucurbita moschata OX=3662 GN=LOC1114383...	[more]
A0A6J1L2E1	2.2e-104	89.95	uncharacterized protein LOC111499776 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1G8M5	4.9e-104	90.41	uncharacterized protein LOC111451827 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Tan0000947 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44065.1	1.9e-60	62.24	Ribosomal protein L2 family	[more]
AT2G44065.2	1.9e-60	62.24	Ribosomal protein L2 family	[more]
ATCG00830.1	1.1e-31	49.01	ribosomal protein L2	[more]
ATCG01310.1	1.1e-31	49.01	ribosomal protein L2	[more]
AT3G51190.1	1.1e-20	44.17	Ribosomal protein L2 family	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022669	Ribosomal protein L2, C-terminal	SMART	SM01382	Ribosomal_L2_C_2	coord: 65..198 e-value: 9.0E-73 score: 257.7
IPR022669	Ribosomal protein L2, C-terminal	PFAM	PF03947	Ribosomal_L2_C	coord: 67..196 e-value: 1.4E-52 score: 177.1
IPR014726	Ribosomal protein L2, domain 3	GENE3D	4.10.950.10	Ribosomal protein L2, domain 3	coord: 138..212 e-value: 2.1E-26 score: 93.9
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 56..137 e-value: 1.9E-29 score: 103.3
IPR005880	Ribosomal protein L2, bacterial/organellar-type	TIGRFAM	TIGR01171	TIGR01171	coord: 59..210 e-value: 5.4E-53 score: 178.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..212
None	No IPR available	PANTHER	PTHR13691:SF5	39S RIBOSOMAL PROTEIN L2, MITOCHONDRIAL	coord: 10..211
IPR002171	Ribosomal protein L2	PANTHER	PTHR13691	RIBOSOMAL PROTEIN L2	coord: 10..211
IPR022671	Ribosomal protein L2, conserved site	PROSITE	PS00467	RIBOSOMAL_L2	coord: 160..171
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 67..203

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0000947.1	Tan0000947.1	mRNA
Tan0000947.2	Tan0000947.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0016740	transferase activity